# terms

id: PBO:0074697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70G","termid":"PBO:0074697"}


id: PBO:0108547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I termination factor, Myb family Eta2","termid":"PBO:0108547"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: GO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.","definition_xrefs":["EC:4.1.2.4","RHEA:12821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deoxyribose-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-6787321","KEGG_REACTION:R01066","MetaCyc:DEOXYRIBOSE-P-ALD-RXN"],"synonyms":[{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)","type":"related"},{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase activity","type":"related"},{"name":"2-deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"deoxyriboaldolase activity","type":"related"},{"name":"deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"phosphodeoxyriboaldolase activity","type":"related"}],"termid":"GO:0004139"}


id: PBO:0016101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase Nad1 (predicted)","termid":"PBO:0016101"}


id: PBO:0069466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 731, pseudogene","termid":"PBO:0069466"}


id: GO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD27, a receptor found on the surface of T cells and some B cells and NK cells.","definition_xrefs":["GOC:jl","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CD27 receptor binding","termid":"GO:0005175"}


id: PBO:0017996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amno acid transmembrane transporter Fnx2","termid":"PBO:0017996"}


id: GO:0046937
data:
  {"annotated_genes":["SJAG_04516","SJAG_01351","SJAG_00988","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104345,88919,92709,93075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[92710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin metabolic process","type":"related"},{"name":"cadystin metabolism","type":"related"},{"name":"phytochelatin metabolism","type":"exact"}],"termid":"GO:0046937","terms_by_termid":{"GO:0046938":null,"GO:0090423":null}}


id: PBO:0029792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actin_cortical_patch","termid":"PBO:0029792"}


id: PBO:0027082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027082"}


id: PBO:0055137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2556","termid":"PBO:0055137"}


id: PBO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain","termid":"PBO:0000657"}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_04527","SJAG_01463","SJAG_04019","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97970,99261,105777,112072],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:15242644","PMID:11157775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.26.3","Reactome:R-HSA-9708292","Reactome:R-HSA-9708408","Reactome:R-HSA-203893","Reactome:R-HSA-426464","Reactome:R-HSA-203862","Reactome:R-HSA-9820840","MetaCyc:3.1.26.3-RXN"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: PBO:0066593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOG family member 2, pseudogene","termid":"PBO:0066593"}


id: PBO:0084732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; transports oxaloacetate, sulfate, thiosulfate, and isopropylmalate; member of the mitochondrial carrier family","termid":"PBO:0084732"}


id: PBO:0034795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChAPs family protein bch1","termid":"PBO:0034795"}


id: PBO:0070049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 6, pseudogene","termid":"PBO:0070049"}


id: PBO:0087957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane osmosensor for filamentous growth and HOG pathways; involved in activation of the Cdc42p- and MAP kinase-dependent filamentous growth pathway and the high-osmolarity glycerol (HOG) response pathway; phosphorylated by Hog1p; interacts with Pbs2p, Msb2p, Hkr1p, and Ste11p","termid":"PBO:0087957"}


id: GO:0021931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to neurons of the lateral pontine nucleus and the locus ceruleus.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","PMID:15157725","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in external granule layer","termid":"GO:0021924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostral hindbrain neuronal precursor cell proliferation","termid":"GO:0021931"}


id: PBO:0080791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA, DNA damage recognition and repair factor","termid":"PBO:0080791"}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: PBO:0029628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029628"}


id: GO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PO:0005702","PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerenchyma formation","termid":"GO:0010618"}


id: PBO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-47","termid":"PBO:0051411"}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: SO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000968 sequence_replication_mode (obsolete SO:0000968)","synonyms":[{"name":"sequence replication mode","type":"exact"}],"termid":"SO:0000968"}


id: PBO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 10","termid":"PBO:0072080"}


id: GO:0098821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0038023","GO:0140096","GO:0003674","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"BMP receptor activity","termid":"GO:0098821"}


id: PBO:0063271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 17 pseudogene","termid":"PBO:0063271"}


id: PBO:0045129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 2","termid":"PBO:0045129"}


id: PBO:0034747
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-translationally cleaved tandem fusion","termid":"PBO:0034747"}


id: PBO:0064795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1M","termid":"PBO:0064795"}


id: PBO:0084471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep1p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; required for Rep1p stability; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084471"}


id: GO:0098592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the apical region of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of apical plasma membrane","termid":"GO:0098592"}


id: PBO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 3","termid":"PBO:0061484"}


id: PR:B5BP49
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC460.05 gene.","definition_xrefs":["UniProtKB:B5BP49","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C460.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.05","synonyms":[{"name":"Spom972h-SPBC460.05","type":"exact"}],"termid":"PR:B5BP49"}


id: GO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["OMIM:602754","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel activity","synonyms":[{"name":"SK KCa channels","type":"exact"},{"name":"SK calcium-activated potassium channel activity","type":"exact"},{"name":"small conductance KCa channels","type":"exact"}],"termid":"GO:0016286"}


id: GO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["PMID:20494127","GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled opioid receptor activity","synonyms":[{"name":"opioid receptor activity","type":"broad"}],"termid":"GO:0004985"}


id: PBO:0004408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7 (predicted)","termid":"PBO:0004408"}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: PBO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates adg1","termid":"PBO:0001952"}


id: MOD:00110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl disulfide.","definition_xrefs":["PubMed:10555576","PubMed:163643","PubMed:2056535","Unimod:39#C","PubMed:6381494","RESID:AA0101","OMSSA:179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine methyl disulfide","synonyms":[{"name":"(2R)-2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldisulfanediyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(methyldithio)propanoic acid","type":"exact"},{"name":"2-amino-3-methyldisulfanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-(methyldisulfanediyl)-propanoic acid","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"L-3-(methyldithio)alanine","type":"exact"},{"name":"L-cysteine methyl disulfide","type":"exact"},{"name":"MOD_RES Cysteine methyl disulfide","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"S-methylthio-L-cysteine","type":"exact"},{"name":"S-methylthiocysteine","type":"exact"},{"name":"methyl methanethiolsulfonate derivatized cysteine","type":"exact"},{"name":"methyl methanethiosulfonate derivatized cysteine","type":"exact"},{"name":"mmts","type":"exact"}],"termid":"MOD:00110"}


id: PBO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51 (predicted)","termid":"PBO:0003734"}


id: PBO:0111056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: FYPO:0002614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to pre-autophagosomal structure","synonyms":[{"name":"abnormal protein localisation to PAS","type":"exact"},{"name":"abnormal protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"abnormal protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002614"}


id: FYPO:0001246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"normal RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"normal RNA level during cellular response to H2O2","type":"exact"},{"name":"normal RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"normal transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001246"}


id: PBO:0091862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog","termid":"PBO:0091862"}


id: PR:O94728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.16c gene.","definition_xrefs":["UniProtKB:O94728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.16c","synonyms":[{"name":"Spom972h-SPBC1604.16c","type":"exact"}],"termid":"PR:O94728"}


id: PBO:0073800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 6 pseudogene 1","termid":"PBO:0073800"}


id: PBO:0077628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1B","termid":"PBO:0077628"}


id: GO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B acetylation (obsolete GO:0043969)","termid":"GO:0043969"}


id: PBO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (CTG) 1-1","termid":"PBO:0061170"}


id: FYPO:0001040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thiamine diphosphokinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal thiamine diphosphokinase activity","termid":"FYPO:0001039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased thiamine diphosphokinase activity","synonyms":[{"name":"reduced thiamine diphosphokinase activity","type":"exact"}],"termid":"FYPO:0001040"}


id: GO:0014912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell migration.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell migration","termid":"GO:0014912"}


id: PBO:0002958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEN-1 endonuclease Rad2","termid":"PBO:0002958"}


id: GO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"leukotriene transport","termid":"GO:0071716"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: GO:0015210
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83929],"is_not":false,"summary":null,"term":"GO:0015210"},{"annotations":[91211,83930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of uracil, 2,4-dioxopyrimidine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"uracil transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil/uridine permease activity","type":"related"}],"termid":"GO:0015210","terms_by_termid":{"GO:0015210":null,"GO:0015505":null}}


id: FYPO:0000048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which invasive growth does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth abolished (obsolete FYPO:0000048)","synonyms":[{"name":"absent invasive growth","type":"exact"},{"name":"invasive growth abolished during vegetative growth","type":"exact"},{"name":"invasive growth: absent","type":"related"}],"termid":"FYPO:0000048"}


id: GO:1900684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"negatively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumonisin biosynthetic process","synonyms":[{"name":"down regulation of fumonisin anabolism","type":"exact"},{"name":"down regulation of fumonisin biosynthesis","type":"exact"},{"name":"down regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down regulation of fumonisin formation","type":"exact"},{"name":"down regulation of fumonisin synthesis","type":"exact"},{"name":"down-regulation of fumonisin anabolism","type":"exact"},{"name":"down-regulation of fumonisin biosynthesis","type":"exact"},{"name":"down-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down-regulation of fumonisin formation","type":"exact"},{"name":"down-regulation of fumonisin synthesis","type":"exact"},{"name":"downregulation of fumonisin anabolism","type":"exact"},{"name":"downregulation of fumonisin biosynthesis","type":"exact"},{"name":"downregulation of fumonisin biosynthetic process","type":"exact"},{"name":"downregulation of fumonisin formation","type":"exact"},{"name":"downregulation of fumonisin synthesis","type":"exact"},{"name":"inhibition of fumonisin anabolism","type":"exact"},{"name":"inhibition of fumonisin biosynthesis","type":"exact"},{"name":"inhibition of fumonisin biosynthetic process","type":"narrow"},{"name":"inhibition of fumonisin formation","type":"exact"},{"name":"inhibition of fumonisin synthesis","type":"exact"},{"name":"negative regulation of fumonisin anabolism","type":"exact"},{"name":"negative regulation of fumonisin biosynthesis","type":"exact"},{"name":"negative regulation of fumonisin formation","type":"exact"},{"name":"negative regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900684"}


id: GO:0008047
data:
  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to and increases the activity of an enzyme.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function activator 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id: GO:1901402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole metabolic process","synonyms":[{"name":"down regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole metabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"downregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole metabolism","type":"exact"},{"name":"inhibition of tetrapyrrole metabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole metabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901402"}


id: SO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation, where it increases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_induced","termid":"SO:0000125"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_autoregulated","synonyms":[{"name":"positively autoregulated","type":"exact"}],"termid":"SO:0000475"}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: PBO:0111301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp39","termid":"PBO:0111301"}


id: GO:0045956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"positive regulation of regulated secretory pathway","termid":"GO:1903307"},{"relation_name":"positively_regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis","synonyms":[{"name":"activation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"stimulation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis","type":"exact"}],"termid":"GO:0045956"}


id: PBO:0088864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl3, WD repeat protein Rrb1","termid":"PBO:0088864"}


id: GO:1901230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901230)","synonyms":[{"name":"down regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"inhibition of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"inhibition of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"related"}],"termid":"GO:1901230"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0056462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 2","termid":"PBO:0056462"}


id: PBO:0083115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair methyltransferase (6-O-methylguanine-DNA methylase); involved in protection against DNA alkylation damage","termid":"PBO:0083115"}


id: GO:0072246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"},{"relation_name":"part_of","term_name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell development","synonyms":[{"name":"metanephric Bowman's capsule development","type":"exact"}],"termid":"GO:0072246"}


id: PBO:0086697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to endoplasmic reticulum and cytoplasm; null mutant exhibits abnormal lipid metabolic phenotype; predicted to encode a membrane transporter based on phylogenetic analysis; not an essential gene; YJR015W has a paralog, SNG1, that arose from the whole genome duplication","termid":"PBO:0086697"}


id: GO:0015020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside.","definition_xrefs":["RHEA:21032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2162099","Reactome:R-HSA-8941701","Reactome:R-HSA-159179","Reactome:R-HSA-5617143","Reactome:R-HSA-9632039","Reactome:R-HSA-5604975","Reactome:R-HSA-9756156","Reactome:R-HSA-9756183","GO:0003981","Reactome:R-HSA-9758661","Reactome:R-HSA-5604954","Reactome:R-HSA-174931","Reactome:R-HSA-159194","Reactome:R-HSA-174916","Reactome:R-HSA-9036102","Reactome:R-HSA-158546","Reactome:R-HSA-9632038","Reactome:R-HSA-9638097","Reactome:R-HSA-9036104","Reactome:R-HSA-9749977","MetaCyc:UDP-GLUCURONOSYLTRANSFERASE-RXN","Reactome:R-HSA-9756134","EC:2.4.1.17"],"synonyms":[{"name":"1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17-OH steroid UDPGT activity","type":"narrow"},{"name":"17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3-OH androgenic UDPGT activity","type":"narrow"},{"name":"3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDPGT activity","type":"narrow"},{"name":"GT activity","type":"related"},{"name":"PNP-UDPGT","type":"related"},{"name":"UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronic acid transferase activity","type":"related"},{"name":"UDP glucuronosyltransferase activity","type":"related"},{"name":"UDP glucuronyltransferase activity","type":"related"},{"name":"UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"related"},{"name":"UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"UDP-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronyltransferase activity","type":"related"},{"name":"UDPGA transferase activity","type":"related"},{"name":"UDPGA-glucuronyltransferase activity","type":"related"},{"name":"UDPGT activity","type":"related"},{"name":"UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"bilirubin UDPGT activity","type":"narrow"},{"name":"bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"morphine glucuronyltransferase activity","type":"narrow"},{"name":"p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"pnp-UDPGT activity","type":"narrow"},{"name":"uridine 5'-diphosphoglucuronyltransferase activity","type":"related"},{"name":"uridine diphosphate glucuronyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronyltransferase activity","type":"related"}],"termid":"GO:0015020"}


id: PBO:0056520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mbt domain containing 1","termid":"PBO:0056520"}


id: PBO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-17, pseudogene","termid":"PBO:0052857"}


id: GO:0098802
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane and which functions as a signaling receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane signaling receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098802","terms_by_termid":{"GO:0038038":null}}


id: PBO:0069858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1145, pseudogene","termid":"PBO:0069858"}


id: PBO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by glucose","termid":"PBO:0000113"}


id: GO:0019182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when histamine has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"histamine-gated chloride channel activity","termid":"GO:0019182"}


id: PBO:0046484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC6L2 antisense RNA 1","termid":"PBO:0046484"}


id: PBO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory chain defects","termid":"PBO:0018234"}


id: GO:2000765
data:
  {"annotated_genes":["SJAG_04544","SJAG_02072","SJAG_02723","SJAG_00251","SJAG_01058","SJAG_04159","SJAG_02026","SJAG_00786","SJAG_05000","SJAG_01942","SJAG_02043","SJAG_04383","SJAG_04312","SJAG_00423","SJAG_03501","SJAG_00690","SJAG_04873","SJAG_04130","SJAG_02285","SJAG_04291","SJAG_04085","SJAG_02638","SJAG_03869","SJAG_16454","SJAG_02467","SJAG_02592","SJAG_00600","SJAG_01079","SJAG_04890","SJAG_01047","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85784,91759,91896,95185,96020,96481,98371,101088,105643,107114,108378,112916,113542],"is_not":false,"summary":null,"term":"GO:2000765"},{"annotations":[110911,95181,97632,91263,114306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[108133,86834,105608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[111682,105609,89996,88072,95076,88421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[102530,84051,113216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[90887,99143,99794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00251":null,"SJAG_00423":null,"SJAG_00600":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01079":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02072":null,"SJAG_02285":null,"SJAG_02467":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_02723":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04085":null,"SJAG_04130":null,"SJAG_04159":null,"SJAG_04291":null,"SJAG_04312":null,"SJAG_04383":null,"SJAG_04544":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_05000":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000765","terms_by_termid":{"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: GO:1905647
data:
  {"annotated_genes":["SJAG_04637","SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96109,96993],"is_not":false,"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of proline from outside of a cell into the cytoplasmic compartment.","definition_xrefs":["PMID:24344203","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04637":null,"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"proline import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902825"],"synonyms":[{"name":"proline import into cell","type":"exact"}],"termid":"GO:1905647","terms_by_termid":{"GO:1905647":null}}


id: GO:1904751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:BHF","GOC:nc","PMID:24415760","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"positively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to nucleolus","synonyms":[{"name":"activation of protein localisation in nucleolus","type":"narrow"},{"name":"activation of protein localisation to nucleolus","type":"narrow"},{"name":"activation of protein localization in nucleolus","type":"narrow"},{"name":"activation of protein localization to nucleolus","type":"narrow"},{"name":"positive regulation of protein localisation in nucleolus","type":"exact"},{"name":"positive regulation of protein localisation to nucleolus","type":"exact"},{"name":"positive regulation of protein localization in nucleolus","type":"exact"},{"name":"up regulation of protein localisation in nucleolus","type":"exact"},{"name":"up regulation of protein localisation to nucleolus","type":"exact"},{"name":"up regulation of protein localization in nucleolus","type":"exact"},{"name":"up regulation of protein localization to nucleolus","type":"exact"},{"name":"up-regulation of protein localisation in nucleolus","type":"exact"},{"name":"up-regulation of protein localisation to nucleolus","type":"exact"},{"name":"up-regulation of protein localization in nucleolus","type":"exact"},{"name":"up-regulation of protein localization to nucleolus","type":"exact"},{"name":"upregulation of protein localisation in nucleolus","type":"exact"},{"name":"upregulation of protein localisation to nucleolus","type":"exact"},{"name":"upregulation of protein localization in nucleolus","type":"exact"},{"name":"upregulation of protein localization to nucleolus","type":"exact"}],"termid":"GO:1904751"}


id: PBO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2189","termid":"PBO:0054776"}


id: GO:0034903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan ether + O2 + 2 H+ + 2 e- = endosulfan hydroxyether + H2O.","definition_xrefs":["UM-BBD_reactionID:r1413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"endosulfan ether monooxygenase activity","termid":"GO:0034903"}


id: GO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of one bond in native collagen. Cleavage of the triple helix of collagen at about three-quarters of the length of the molecule from the N-terminus, at Gly775-Ile776 in the alpha-1(I) chain. Cleaves synthetic substrates and alpha-macroglobulins at bonds where P1' is a hydrophobic residue.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interstitial collagenase activity (obsolete GO:0004232)","synonyms":[{"name":"MMP-1","type":"exact"},{"name":"interstitial collagenase activity","type":"exact"},{"name":"matrix metalloproteinase 1","type":"exact"},{"name":"vertebrate collagenase activity","type":"related"}],"termid":"GO:0004232"}


id: PBO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae thi7","termid":"PBO:0003044"}


id: MOD:01336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE - identical and redundant with MOD:00657. Remap to MOD:00657.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01336 deamidation followed by a methylation -site Q (obsolete MOD:01336)","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01336"}


id: GO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = secologanin + tryptamine.","definition_xrefs":["EC:4.3.3.2","RHEA:15013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"strictosidine synthase activity","secondary_identifiers":["MetaCyc:STRICTOSIDINE-SYNTHASE-RXN","KEGG_REACTION:R03738"],"synonyms":[{"name":"3-alpha(S)-strictosidine tryptamine-lyase (secologanin-forming)","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase activity","type":"related"},{"name":"STR activity","type":"related"},{"name":"strictosidine synthetase activity","type":"related"}],"termid":"GO:0016844"}


id: PBO:0084295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment","termid":"PBO:0084295"}


id: PBO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 6","termid":"PBO:0042969"}


id: GO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brood size","termid":"GO:0060378"}


id: PBO:0060624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1 like","termid":"PBO:0060624"}


id: _global:has_part
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Inverse of part_of.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","secondary_identifiers":["BFO:0000051"],"synonyms":[{"name":"has part","type":"exact"}],"termid":"_global:has_part"}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: PBO:0073074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 3","termid":"PBO:0073074"}


id: GO:0101029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents or reduces the surface tension of a liquid.","definition_xrefs":["GOC:sl","PMID:20949060"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of liquid surface tension (obsolete GO:0101029)","synonyms":[{"name":"negative regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101029"}


id: GO:0004070
data:
  {"annotated_genes":["SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89037,102394],"is_not":false,"summary":null,"term":"GO:0004070"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H+ + phosphate.","definition_xrefs":["EC:2.1.3.2","RHEA:20013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73573","KEGG_REACTION:R01397","MetaCyc:ASPCARBTRANS-RXN"],"synonyms":[{"name":"ATCase activity","type":"related"},{"name":"L-aspartate transcarbamoylase activity","type":"related"},{"name":"L-aspartate transcarbamylase activity","type":"related"},{"name":"aspartate carbamyltransferase activity","type":"related"},{"name":"aspartate transcarbamoylase activity","type":"related"},{"name":"aspartate transcarbamylase activity","type":"related"},{"name":"aspartic acid transcarbamoylase activity","type":"related"},{"name":"aspartic carbamyltransferase activity","type":"related"},{"name":"aspartic transcarbamylase activity","type":"related"},{"name":"carbamoyl-phosphate:L-aspartate carbamoyltransferase activity","type":"related"},{"name":"carbamoylaspartotranskinase activity","type":"related"},{"name":"carbamylaspartotranskinase activity","type":"related"}],"termid":"GO:0004070","terms_by_termid":{"GO:0004070":null}}


id: FYPO:0005703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"decreased microtubule plus end growth rate","type":"exact"},{"name":"decreased microtubule polymerization rate","type":"exact"},{"name":"decreased rate of microtubule growth","type":"exact"},{"name":"decreased rate of microtubule polymerisation","type":"exact"},{"name":"decreased rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"reduced rate of microtubule polymerization","type":"exact"}],"termid":"FYPO:0005703"}


id: PATO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the presence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F mating type","termid":"PATO:0001347"}


id: PBO:0026654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_mitotic_actomyosin_contractile_ring_localization","termid":"PBO:0026654"}


id: RO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","termid":"RO:0002091"}


id: PBO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 9 pseudogene","termid":"PBO:0061955"}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["PMID:19539744","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0044281","GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: FYPO:0003252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on proline nitrogen source","synonyms":[{"name":"abolished growth on proline nitrogen source","type":"broad"},{"name":"abolished proline utilization","type":"related"},{"name":"abolished vegetative cell population growth on proline nitrogen source","type":"exact"},{"name":"cell population growth on proline nitrogen source abolished","type":"exact"}],"termid":"FYPO:0003252"}


id: GO:0030827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP biosynthetic process (obsolete GO:0030827)","synonyms":[{"name":"down regulation of cGMP biosynthetic process","type":"exact"},{"name":"down-regulation of cGMP biosynthetic process","type":"exact"},{"name":"downregulation of cGMP biosynthetic process","type":"exact"},{"name":"inhibition of cGMP biosynthetic process","type":"narrow"},{"name":"negative regulation of cGMP anabolism","type":"exact"},{"name":"negative regulation of cGMP biosynthesis","type":"exact"},{"name":"negative regulation of cGMP formation","type":"exact"},{"name":"negative regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030827"}


id: FYPO:0002401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers","synonyms":[{"name":"extra microtubule bundles","type":"exact"},{"name":"increased level of MT bundles","type":"exact"},{"name":"increased microtubule bundling","type":"related"},{"name":"increased number of microtubule bundles","type":"exact"},{"name":"microtubule arrays present in increased numbers","type":"related"},{"name":"microtubule bundles present in greater numbers","type":"exact"}],"termid":"FYPO:0002401"}


id: SO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"aptamer","termid":"SO:0000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_aptamer","synonyms":[{"name":"DNA aptamer","type":"exact"}],"termid":"SO:0000032"}


id: PBO:0012265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter Aat1","termid":"PBO:0012265"}


id: GO:0098971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neurotransmitter receptor complex along microtubules in nerve cell dendrites towards the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"anterograde dendritic transport of neurotransmitter receptor complex","termid":"GO:0098971"}


id: GO:0042707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into photoreceptor cell in the ocellus. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell fate commitment","termid":"GO:0042707"}


id: PBO:0053182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 1","termid":"PBO:0053182"}


id: PBO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic vesicle protein, Vid24 family (predicted)","termid":"PBO:0001262"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: GO:0102687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + dihydrozeatin-7-N-glucose + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:dihydrozeatin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4724"],"termid":"GO:0102687"}


id: PBO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A13, pseudogene","termid":"PBO:0047010"}


id: GO:0005125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a soluble extracellular gene product that interacts with a receptor to effect a change in the activity of the receptor to control the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["PMID:11530802","ISBN:0198599471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0098772","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"cytokine activity","synonyms":[{"name":"autocrine activity","type":"related"},{"name":"paracrine activity","type":"related"}],"termid":"GO:0005125"}


id: GO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex formed by a recombinase, a regulatory protein, and the DNA sequences bound by each protein; catalyzes a reversible site-specific recombination reaction that results in the alternate expression of one or more genes in various contexts.","definition_xrefs":["PMID:11114897","PMID:9732277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"invertasome","termid":"GO:0031421"}


id: MOD:01880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0564","PubMed:16452303","ChEBI:50038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-deoxyhypusine","synonyms":[{"name":"(2S)-2-amino-6-[(4-aminobutyl)amino]hexanoic acid","type":"exact"},{"name":"L-deoxyhypusine","type":"exact"},{"name":"MOD_RES Deoxyhypusine","type":"exact"},{"name":"N6-(4-aminobutyl)lysine","type":"exact"},{"name":"deoxyhypusine","type":"exact"}],"termid":"MOD:01880"}


id: GO:0042565
data:
  {"annotated_genes":["SJAG_01534"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92189],"is_not":false,"summary":null,"term":"GO:0042565"}]},"cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["GOC:jl","PMID:9323123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01534":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA nuclear export complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042565","terms_by_termid":{"GO:0042565":null}}


id: PBO:0076293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin binding cytoplasmic RNA interacting protein","termid":"PBO:0076293"}


id: PBO:0054391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1787","termid":"PBO:0054391"}


id: GO:0007474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the area of a imaginal disc-derived wing that will form a wing vein is specified.","definition_xrefs":["GOC:isa_complete","GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein specification","synonyms":[{"name":"wing vein specification","type":"exact"}],"termid":"GO:0007474"}


id: PBO:0041091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BR serine/threonine kinase 2","termid":"PBO:0041091"}


id: PBO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 16","termid":"PBO:0071475"}


id: GO:0034634
data:
  {"annotated_genes":["SJAG_03577","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91199,109156],"is_not":false,"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glutathione, the tripeptide glutamylcysteinylglycine, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transporter activity","termid":"GO:0042937"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glutathione transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034634","terms_by_termid":{"GO:0034634":null}}


id: GO:0000182
data:
  {"annotated_genes":["SJAG_00247","SJAG_03354","SJAG_00883","SJAG_04855","SJAG_05253","SJAG_03905","SJAG_04766","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91076,97969,98715,99168,103122],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[111086,98069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[98070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[95313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence encoding a ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00883":null,"SJAG_03354":null,"SJAG_03905":null,"SJAG_04527":null,"SJAG_04766":null,"SJAG_04855":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"rDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal DNA binding","type":"exact"}],"termid":"GO:0000182","terms_by_termid":{"GO:0000182":null,"GO:0001002":null,"GO:0043110":null,"GO:0110035":null}}


id: GO:2000249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin cytoskeleton reorganization (obsolete GO:2000249)","synonyms":[{"name":"regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000249"}


id: PBO:0083892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) nuclear basket; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier; found in stable complex with Nup82p, Gle2p and two other FG-nucleoporins (Nup159p and Nup116p); also found in stable complex with Nic96p and two other FG-nucleoproteins (Nup49p and Nup57p)","termid":"PBO:0083892"}


id: GO:0033980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + 2 H+ = CO2 + phosphonoacetaldehyde.","definition_xrefs":["RHEA:20768","EC:4.1.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04053","MetaCyc:4.1.1.82-RXN"],"synonyms":[{"name":"3-phosphonopyruvate carboxy-lyase (2-phosphonoacetaldehyde-forming) activity","type":"related"},{"name":"3-phosphonopyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0033980"}


id: PBO:0056547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 1","termid":"PBO:0056547"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: PBO:0082658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; this complex has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs through deadenylation; basal transcription factor","termid":"PBO:0082658"}


id: PBO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 5","termid":"PBO:0039587"}


id: PBO:0004236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Mts4","termid":"PBO:0004236"}


id: PBO:0087859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in maintenance of ion homeostasis; also involved in protection against DNA damage caused by bleomycin and other oxidants; contains a C-terminal leucine-rich repeat","termid":"PBO:0087859"}


id: GO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The leaf morphogenesis process that results in the shaping of a compound leaf. A compound leaf is a leaf having two or more distinct leaflets that are evident as such from early in development.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound leaf morphogenesis","termid":"GO:0060777"}


id: PBO:0029986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquitin_ligase_activity","termid":"PBO:0029986"}


id: FYPO:0000726
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115672,115684],"is_not":false,"summary":null,"term":"FYPO:0000726"},{"annotations":[115353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to oxidative stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_04312","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to oxidative stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to oxidative stress","type":"exact"},{"name":"hypersensitive to oxidative stress","type":"exact"},{"name":"oxidative stress resistance: decreased","type":"related"},{"name":"sensitive to oxidative stress during mitotic cell cycle","type":"related"},{"name":"sensitive to oxidative stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000726","terms_by_termid":{"FYECO:0000078":null,"FYPO:0000087":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: PBO:0075128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 25","termid":"PBO:0075128"}


id: GO:0071694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location within the extracellular region and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location","termid":"GO:0045185"},{"relation_name":"part_of","term_name":"protein localization to extracellular region","termid":"GO:0071692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}


id: GO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators.","definition_xrefs":["PMID:9759503"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity (obsolete GO:0030617)","synonyms":[{"name":"TGF-beta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"inhibitory SMAD protein","type":"related"}],"termid":"GO:0030617"}


id: GO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052232)","synonyms":[{"name":"positive aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052232"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100263,100469],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016853"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:5.99.1.2-RXN","EC:5.6.2.1"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: GO:0035644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated anandamide.","definition_xrefs":["GOC:BHF","PMID:16938887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphoanandamide dephosphorylation","termid":"GO:0035644"}


id: GO:0018980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound which is widely used as a herbicide, often as a weed killer for home lawns.","definition_xrefs":["UM-BBD_pathwayID:2,4,5-t"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:2\\,4\\,5-t"],"synonyms":[{"name":"2,4,5-T metabolic process","type":"exact"},{"name":"2,4,5-T metabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid metabolism","type":"exact"}],"termid":"GO:0018980"}


id: FYPO:0005771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions where nucleosomes are depleted. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005771"}


id: GO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:nln","ISBN:0192800752","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine metabolic process","synonyms":[{"name":"acetylcholine metabolism","type":"exact"}],"termid":"GO:0008291"}


id: PBO:0062509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 1 pseudogene","termid":"PBO:0062509"}


id: PBO:0076518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 20","termid":"PBO:0076518"}


id: GO:0098572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"stromal side of plastid thylakoid membrane","termid":"GO:0098572"}


id: PBO:0076458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 1, erythroid differentiation factor","termid":"PBO:0076458"}


id: PBO:0028634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_aculeacin_A","termid":"PBO:0028634"}


id: PBO:0091809
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. octosporus rsv1","termid":"PBO:0091809"}


id: GO:0007491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the sternite are generated and organized. The sternite is the plate or sclerite on the underside of a body segment.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sternite morphogenesis","termid":"GO:0007491"}


id: PBO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin B1","termid":"PBO:0048926"}


id: GO:0008746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+.","definition_xrefs":["EC:1.6.1.2","EC:1.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor","termid":"GO:0016652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"NAD(P)+ transhydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00112","Reactome:R-HSA-450971","RHEA:11692"],"synonyms":[{"name":"H+-thase","type":"broad"},{"name":"NAD transhydrogenase","type":"broad"},{"name":"NADH transhydrogenase","type":"broad"},{"name":"NADH-NADP-transhydrogenase","type":"broad"},{"name":"NADPH-NAD oxidoreductase","type":"broad"},{"name":"NADPH-NAD transhydrogenase","type":"broad"},{"name":"NADPH:NAD+ transhydrogenase","type":"broad"},{"name":"energy-linked transhydrogenase","type":"related"},{"name":"nicotinamide adenine dinucleotide (phosphate) transhydrogenase","type":"broad"},{"name":"pyridine nucleotide transferase","type":"broad"}],"termid":"GO:0008746"}


id: GO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"centrosome duplication","synonyms":[{"name":"centrosome replication","type":"exact"}],"termid":"GO:0051298"}


id: GO:0097706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to oscillatory fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","PMID:21768538","GOC:BHF","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to oscillatory fluid shear stress","termid":"GO:0097704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to oscillatory fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to oscillatory fluid shear stress","type":"exact"}],"termid":"GO:0097706"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["EC:4.2.1.12","RHEA:17277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["MetaCyc:PGLUCONDEHYDRAT-RXN","KEGG_REACTION:R02036"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: PBO:0081622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 551","termid":"PBO:0081622"}


id: PBO:0028952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_cell_during_recovery_from_stationary_phase","termid":"PBO:0028952"}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: PBO:0089630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X ortholog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0089630"}


id: SO:1000058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA point mutation that causes a substitution of an amino acid by an other.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript (obsolete SO:1000058)","synonyms":[{"name":"mutation causing non synonymous codon change in transcript","type":"related"},{"name":"non-synonymous codon change in transcript","type":"exact"},{"name":"sequence variant causing non synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000058"}


id: PATO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy","termid":"PATO:0000454"}


id: PBO:0057372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548an","termid":"PBO:0057372"}


id: PBO:0055099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2517","termid":"PBO:0055099"}


id: GO:0009835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An developmental maturation process that has as participant a fruit. Ripening causes changes in one or more characteristics of a fruit (color, aroma, flavor, texture, hardness, cell wall structure) and may make it more attractive to animals and aid in seed dispersal.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening","secondary_identifiers":["Wikipedia:Ripening"],"synonyms":[{"name":"fruit maturation","type":"related"},{"name":"fruit senescence","type":"related"}],"termid":"GO:0009835"}


id: PATO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially broken","termid":"PATO:0002082"}


id: FYPO:0000416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins before anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic sister chromatid separation","synonyms":[{"name":"advanced mitotic sister chromatid separation","type":"exact"},{"name":"chromosome segregation: premature","type":"broad"},{"name":"premature chromosome separation during vegetative growth","type":"exact"},{"name":"premature mitotic chromosome separation","type":"exact"},{"name":"premature sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000416"}


id: PBO:0029313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029313"}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: PBO:0056571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCPH1 divergent transcript","termid":"PBO:0056571"}


id: GO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of high density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to high density lipoprotein particle stimulus","termid":"GO:0071403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"high density lipoprotein particle mediated signaling","synonyms":[{"name":"high density lipoprotein mediated signalling","type":"exact"},{"name":"high density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"high density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055097"}


id: PBO:0086042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; green fluorescent protein (GFP)-fusion localizes to the ER; null mutant displays increased levels of spontaneous Rad52p foci; IRC23 has a paralog, BSC2, that arose from the whole genome duplication","termid":"PBO:0086042"}


id: GO:1905932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:25089138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905917"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"positive regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905932"}


id: FYPO:0007537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is enhanced.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased replication slippage during replication fork processing","synonyms":[{"name":"increased replication slippage during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased replication slippage during replication fork processing during vegetative growth","type":"exact"}],"termid":"FYPO:0007537"}


id: PBO:0065942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 2","termid":"PBO:0065942"}


id: PBO:0067116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 160, pseudogene","termid":"PBO:0067116"}


id: PBO:0053708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 911","termid":"PBO:0053708"}


id: GO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"E-phenylitaconyl-CoA hydratase activity","termid":"GO:0018809"}


id: PBO:0090598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Ipi1","termid":"PBO:0090598"}


id: GO:1990257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic dense-core vesicle that transports a range of proteins including piccolo, bassoon, N-cadherin and syntaxin. The transported proteins may be associated with the external side of the vesicle, rather than being contained within the vesicle, therefore forming an aggregate of vesicle and proteins. Piccolo-bassoon transport vesicles (or PTVs) range in size from approximately 80 nm in diameter for dense core vesicles to 130 nm by 220 nm in area for aggregates. They are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["PMID:21569270","GOC:dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"piccolo-bassoon transport vesicle","synonyms":[{"name":"PTV","type":"related"}],"termid":"GO:1990257"}


id: PBO:0085625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; interacts with the Rho1p small GTP-binding protein and with the Rho-type GTPase Cdc42p; involved in maintenance of proper telomere length","termid":"PBO:0085625"}


id: PBO:0028181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_selenite_ion","termid":"PBO:0028181"}


id: GO:0010314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-5-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 5' position.","definition_xrefs":["GOC:bf","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate binding","termid":"GO:0010314"}


id: PBO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (predicted)","termid":"PBO:0003281"}


id: PBO:0085455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; localized to sites of polarized growth; member of a fungal-specific gene family; potential Cdc28p substrate; KCH1 has a paralog, PRM6, that arose from the whole genome duplication","termid":"PBO:0085455"}


id: PBO:0058028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3977","termid":"PBO:0058028"}


id: PBO:0085934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; protein identified via enrichment-based proteogenomics; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085934"}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: PBO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX39B antisense RNA 1","termid":"PBO:0044754"}


id: GO:0006387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sequence of enzymatic reactions resulting in the addition of a cap to the 5' end of a nascent snRNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA capping (obsolete GO:0006387)","synonyms":[{"name":"snRNA capping","type":"exact"}],"termid":"GO:0006387"}


id: PBO:0028754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactomannan_absent_from_cell_wall","termid":"PBO:0028754"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: PBO:0054218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1599","termid":"PBO:0054218"}


id: PBO:0063132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP1 binding protein","termid":"PBO:0063132"}


id: GO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. For example, viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.","definition_xrefs":["PMID:19109390","PMID:10388655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host IRF9 activity","secondary_identifiers":["VZ:683"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"inhibition of host IRF9 by virus","type":"narrow"},{"name":"inhibition of host interferon regulatory factor-9 by virus","type":"narrow"},{"name":"suppression by virus of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host interferon regulatory factor 9 activity","type":"narrow"}],"termid":"GO:0039560"}


id: GO:0102293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophytin b + H2O = H+ + pheophorbide b + phytol.","definition_xrefs":["GOC:pz","EC:3.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pheophytinase b activity","secondary_identifiers":["MetaCyc:RXN-12686"],"termid":"GO:0102293"}


id: PBO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP2U1 and SGMS2 antisense RNA 1","termid":"PBO:0044418"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: PBO:0045543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 3 like","termid":"PBO:0045543"}


id: GO:0097009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the balance between food intake (energy input) and energy expenditure.","definition_xrefs":["GOC:yaf","PMID:15919751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy homeostasis","secondary_identifiers":["GO:2000505","GO:2000506","GO:2000507"],"synonyms":[{"name":"negative regulation of energy homeostasis","type":"related"},{"name":"positive regulation of energy homeostasis","type":"related"},{"name":"regulation of energy homeostasis","type":"related"}],"termid":"GO:0097009"}


id: PBO:0040312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 4","termid":"PBO:0040312"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["GOC:dph","PMID:22863006","PMID:12734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0064242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1","termid":"PBO:0064242"}


id: PBO:0089596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (cytosine-C5-)-methyltransferase activity Nop2","termid":"PBO:0089596"}


id: PBO:0043705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 2","termid":"PBO:0043705"}


id: PBO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(7)(p11.2)","termid":"PBO:0047894"}


id: PATO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having toothlike projections in the margin.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serrated","termid":"PATO:0001206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentated","synonyms":[{"name":"dentate","type":"exact"},{"name":"toothed","type":"exact"}],"termid":"PATO:0001205"}


id: PBO:0084208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing protein and putative transcription factor; found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; TOS8 has a paralog, CUP9, that arose from the whole genome duplication","termid":"PBO:0084208"}


id: GO:0071597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Crater-like ring of chitinous scar tissue located on the surface of the daughter cell, in budding fungi, at the site of separation from the mother cell. It is formed after the newly emerged daughter cell separates, thereby marking the site of cytokinesis and septation.","definition_xrefs":["GOC:mcc","PMID:16672383","PMID:7730409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"cellular birth scar","termid":"GO:0071597"}


id: GO:0047043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lithocholate + NAD+ = 3-oxo-5beta-cholanate + H+ + NADH.","definition_xrefs":["EC:1.1.1.52","RHEA:19585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-alpha-hydroxycholanate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.52-RXN","KEGG_REACTION:R04139"],"synonyms":[{"name":"3alpha-hydroxy-5beta-cholanate:NAD+ oxidoreductase activity","type":"related"},{"name":"3alpha-hydroxycholanate dehydrogenase activity","type":"related"},{"name":"alpha-hydroxy-cholanate dehydrogenase activity","type":"related"}],"termid":"GO:0047043"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: PBO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisF","termid":"PBO:0013080"}


id: GO:0006596
data:
  {"annotated_genes":["SJAG_04546","SJAG_00043","SJAG_03632","SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[107127],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[109400,98553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[109401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYAMSYN-PWY"],"synonyms":[{"name":"polyamine anabolism","type":"exact"},{"name":"polyamine biosynthesis","type":"exact"},{"name":"polyamine formation","type":"exact"},{"name":"polyamine synthesis","type":"exact"}],"termid":"GO:0006596","terms_by_termid":{"GO:0006597":null,"GO:0008295":null,"GO:0010967":null,"GO:0033387":null}}


id: PBO:0056505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K12 binding inhibitory protein 1","termid":"PBO:0056505"}


id: PBO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0005099"}


id: GO:0033470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gibberellin 12, (1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylic acid 1meta,4a-dimethyl-8-methylidene-4aalpha,4bbeta-gibbane-1alpha,10beta-dicarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"},{"relation_name":"is_a","term_name":"gibberellin 12 metabolic process","termid":"GO:0033469"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"gibberellin 12 biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5034"],"synonyms":[{"name":"GA12 biosynthetic process","type":"exact"},{"name":"gibberellin 12 anabolism","type":"exact"},{"name":"gibberellin 12 biosynthesis","type":"exact"},{"name":"gibberellin 12 formation","type":"exact"},{"name":"gibberellin 12 synthesis","type":"exact"},{"name":"gibberellin A12 biosynthetic process","type":"exact"}],"termid":"GO:0033470"}


id: PBO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal protein associated with endocytosis (predicted)","termid":"PBO:0005100"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: GO:0047663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + kanamycin B = N(6')-acetylkanamycin B + CoA + H+. This is acetylation of the 6'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["RHEA:16449","EC:2.3.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside 6'-N-acetyltransferase activity","secondary_identifiers":["MetaCyc:AMINOGLYCOSIDE-N6-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01889"],"synonyms":[{"name":"6'-aminoglycoside-N-acetyltransferase activity","type":"related"},{"name":"AAC(6') activity","type":"related"},{"name":"acetyl-CoA:kanamycin-B N6'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside N6'-acetyltransferase activity","type":"exact"},{"name":"aminoglycoside-6'-acetyltransferase activity","type":"related"},{"name":"aminoglycoside-6-N-acetyltransferase activity","type":"related"},{"name":"kanamycin 6'-N-acetyltransferase activity","type":"narrow"}],"termid":"GO:0047663"}


id: GO:1905252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:bc","GOC:BHF_miRNA","PMID:23069713","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905252)","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905252"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: GO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effects a change in the organization of chromatin in the host.","definition_xrefs":["PMID:11483770","GOC:sp","GOC:bf","PMID:16687403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host process","termid":"GO:0019048"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"modulation by virus of host chromatin organization","synonyms":[{"name":"modulation by virus of host chromatin organisation","type":"exact"},{"name":"modulation of host chromatin by virus","type":"exact"},{"name":"modulation of host chromatin structure by virus","type":"exact"},{"name":"regulation by virus of host chromatin organization","type":"related"}],"termid":"GO:0039525"}


id: PBO:0040745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1","termid":"PBO:0040745"}


id: GO:1902314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroquinone.","definition_xrefs":["PMID:15667223","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hydroquinone binding","synonyms":[{"name":"quinol binding","type":"exact"}],"termid":"GO:1902314"}


id: FYECO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which benzamidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ benzamidine","synonyms":[{"name":"benzamidine added","type":"exact"}],"termid":"FYECO:0000407"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: GO:0007554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"regulation of ecdysteroid anabolism","type":"exact"},{"name":"regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"regulation of ecdysteroid formation","type":"exact"},{"name":"regulation of ecdysteroid synthesis","type":"exact"}],"termid":"GO:0007554"}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: PBO:0078338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 4-1","termid":"PBO:0078338"}


id: PBO:0061288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 9","termid":"PBO:0061288"}


id: GO:1904972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral translation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:19666601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"regulation of viral translation","termid":"GO:1904971"},{"relation_name":"negatively_regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral translation","synonyms":[{"name":"downregulation of viral protein synthesis","type":"exact"},{"name":"down regulation of viral protein anabolism","type":"exact"},{"name":"down regulation of viral protein biosynthesis","type":"exact"},{"name":"down regulation of viral protein biosynthetic process","type":"exact"},{"name":"down regulation of viral protein formation","type":"exact"},{"name":"down regulation of viral protein synthesis","type":"exact"},{"name":"down regulation of viral translation","type":"exact"},{"name":"down-regulation of viral protein anabolism","type":"exact"},{"name":"down-regulation of viral protein biosynthesis","type":"exact"},{"name":"down-regulation of viral protein biosynthetic process","type":"exact"},{"name":"down-regulation of viral protein formation","type":"exact"},{"name":"down-regulation of viral protein synthesis","type":"exact"},{"name":"down-regulation of viral translation","type":"exact"},{"name":"downregulation of viral protein anabolism","type":"exact"},{"name":"downregulation of viral protein biosynthesis","type":"exact"},{"name":"downregulation of viral protein biosynthetic process","type":"exact"},{"name":"downregulation of viral protein formation","type":"exact"},{"name":"downregulation of viral translation","type":"exact"},{"name":"inhibition of viral protein anabolism","type":"narrow"},{"name":"inhibition of viral protein biosynthesis","type":"narrow"},{"name":"inhibition of viral protein biosynthetic process","type":"narrow"},{"name":"inhibition of viral protein formation","type":"narrow"},{"name":"inhibition of viral protein synthesis","type":"narrow"},{"name":"inhibition of viral translation","type":"narrow"},{"name":"negative regulation of viral protein anabolism","type":"exact"},{"name":"negative regulation of viral protein biosynthesis","type":"exact"},{"name":"negative regulation of viral protein biosynthetic process","type":"exact"},{"name":"negative regulation of viral protein formation","type":"exact"},{"name":"negative regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904972"}


id: FYPO:0005393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal, and the population growth rate decreases over successive generations.","definition_xrefs":["PMID:12196391","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002060","FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate","synonyms":[{"name":"progressively decreasing cell population growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation","type":"related"},{"name":"progressively decreasing cell proliferation","type":"related"},{"name":"progressively reduced cell proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0005393"}


id: PBO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 8","termid":"PBO:0070855"}


id: PBO:0064438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 1","termid":"PBO:0064438"}


id: PBO:0091902
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription unchanged","termid":"PBO:0091902"}


id: PBO:0081998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 31","termid":"PBO:0081998"}


id: PBO:0029349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_level","termid":"PBO:0029349"}


id: PR:Q09688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug121 gene.","definition_xrefs":["UniProtKB:Q09688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 121 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.06c","synonyms":[{"name":"Spom972h-mug121","type":"exact"}],"termid":"PR:Q09688"}


id: FYPO:0000804
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115605,115636,115612,115610],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115179],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115530,115531,115637,115344,115336,115523,115337,115524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115577,115589,115592,115580,115578],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"},{"annotations":[115583,115588,115591,115575,115579,115576],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115454],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endomembrane system organization is abnormal. Endomembrane system organization results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system, which encompasses the endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope.","definition_xrefs":["GO:0012505","PomBase:mah","GO:0010256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endomembrane system organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_05207","SJAG_00426","SJAG_04464","SJAG_03940","SJAG_01242","SJAG_02763","SJAG_01906","SJAG_04284","SJAG_01745","SJAG_03891","SJAG_03892"],"single_locus_genotype_uniquenames":["alx1delta","nem1delta","nup61delta","lem2delta","cmp7delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","nem2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal endomembrane system organisation","type":"exact"},{"name":"abnormal endomembrane system organization during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000804","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: GO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear emergence","synonyms":[{"name":"ear elevation","type":"related"},{"name":"ear extroversion","type":"related"},{"name":"outer ear growth","type":"related"}],"termid":"GO:0060186"}


id: GO:0110026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["GOC:mah","PMID:28475874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"}


id: GO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mast cell population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell proliferation","termid":"GO:0070662"}


id: PBO:0083183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the tRNA ORF tI(AAU)N2","termid":"PBO:0083183"}


id: GO:0032586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a protein storage vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole membrane","termid":"GO:0009705"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"protein storage vacuole membrane","termid":"GO:0032586"}


id: GO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome organization","termid":"GO:0002934"}


id: GO:0019061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.","definition_xrefs":["GOC:plm","ISBN:0781702534","PMID:8162442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uncoating of virus","synonyms":[{"name":"viral uncoating","type":"exact"}],"termid":"GO:0019061"}


id: GO:1904955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any Wnt signaling pathway, planar cell polarity pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:PARL","GOC:bf","PMID:22988876"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904955)","synonyms":[{"name":"PCP pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"PCP pathway involved in mDA neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt-JNK signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-JNK signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-PCP signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-PCP signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"broad"},{"name":"non-canonical Wnt-mediated midbrain DA neuron differentiation","type":"broad"},{"name":"planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904955"}


id: PBO:0065635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 4","termid":"PBO:0065635"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["RHEA:17885","EC:4.2.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["MetaCyc:R141-RXN","KEGG_REACTION:R05380","UM-BBD_reactionID:r0591"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: PBO:0025418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex1","termid":"PBO:0025418"}


id: PBO:0082639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082639"}


id: PBO:0066002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGAPA1 pseudogene 1","termid":"PBO:0066002"}


id: PBO:0034739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrtd1/Qtr2","termid":"PBO:0034739"}


id: GO:0046164
data:
  {"annotated_genes":["SJAG_04320","SJAG_00244","SJAG_04954","SJAG_03786","SJAG_04048","SJAG_04192","SJAG_04870","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[112439,88666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[84201,111105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[95753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[100881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alcohol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alcohol breakdown","type":"exact"},{"name":"alcohol catabolism","type":"exact"},{"name":"alcohol degradation","type":"exact"}],"termid":"GO:0046164","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: PBO:0088031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via ubiquitin-26S proteasome system; essential for cellular stress response; encoded as polyubiquitin precursor comprised of 5 head-to-tail repeats; number of repeats is evolutionarily unstable within and between yeast species; protein abundance increases in response to DNA replication stress; implicated as modulator of replicative lifespan","termid":"PBO:0088031"}


id: GO:0102797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranial + O2 + H2O = H+ + geranate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranial:oxygen oxidoreductase activity (obsolete GO:0102797)","termid":"GO:0102797"}


id: PBO:0083108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase I found in nucleus and mitochondria; essential enzyme that joins Okazaki fragments during DNA replication; also acts in ribonucleotide excision repair, base excision repair, and recombination; DNA ligase I mutants trigger ubiquitination of PCNA at K107, facilitating Rad59p-mediated bypass of unligated Okazaki fragments; human homolog LIG1 can complement yeast cdc9 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0083108"}


id: GO:0140764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translational repressor activity that binds to a single-stranded small regulatory RNA (either a miRNA or a siRNA) to guide it to its target mRNA.","definition_xrefs":["PMID:34117606","PMID:27184117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"small RNA binding translational repressor activity","termid":"GO:0140764"}


id: PBO:0042790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164 pseudogene 1","termid":"PBO:0042790"}


id: PATO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000527 relative drug sensitivity value (obsolete PATO:0000527)","termid":"PATO:0000527"}


id: PBO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug121","termid":"PBO:0016889"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: GO:0005094
data:
  {"annotated_genes":["SJAG_02831","SJAG_03361"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95268,106751],"is_not":false,"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor activity","termid":"GO:0005092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02831":null,"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"Rho GDP-dissociation inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005094","terms_by_termid":{"GO:0005094":null}}


id: GO:0035486
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93894],"is_not":false,"summary":null,"term":"GO:0035486"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/C mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"cytosine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C/C mispair binding","type":"exact"}],"termid":"GO:0035486","terms_by_termid":{"GO:0035486":null}}


id: GO:0150099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling that mediates the transfer of information from a neuron to a glial cell. This signaling has been shown to be mediated by various molecules released by different types of neurons, e.g. glutamate, gamma-amino butyric acid (GABA), noradrenaline, acetylcholine, dopamine and adenosine.","definition_xrefs":["GOC:aruk","PMID:10196584","PMID:11399439","PMID:15252819","PMID:10195197","PMID:27788368","PMID:11356870","PMID:10377338","GOC:bc","PMID:10493741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron-glial cell signaling","synonyms":[{"name":"neuron-glia signaling","type":"exact"},{"name":"neuron-glia signalling","type":"exact"},{"name":"neuron-glial cell signalling","type":"exact"},{"name":"neurone-glia signaling","type":"exact"},{"name":"neurone-glia signalling","type":"exact"},{"name":"neurone-glial cell signaling","type":"exact"},{"name":"neurone-glial cell signalling","type":"exact"}],"termid":"GO:0150099"}


id: PBO:0074990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-1","termid":"PBO:0074990"}


id: GO:0006808
data:
  {"annotated_genes":["SJAG_03319","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84330,109884],"is_not":false,"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006808","terms_by_termid":{"GO:0006808":null}}


id: GO:0018607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-indanone + NADPH + 1/2 O2 = NADP+ + 3,4-dihydrocoumarin.","definition_xrefs":["UM-BBD_reactionID:r0417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1-indanone monooxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018607"}


id: GO:0071615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more ethyl groups from a molecule, involving the oxidation (i.e. electron loss) of one or more atoms in the substrate.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative deethylation (obsolete GO:0071615)","termid":"GO:0071615"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:16459497","PMID:9073326","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: PR:O59829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase C965.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.09","synonyms":[{"name":"Spom972h-SPCC965.09","type":"exact"}],"termid":"PR:O59829"}


id: PBO:0073195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin L","termid":"PBO:0073195"}


id: PBO:0051595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL21R antisense RNA 1","termid":"PBO:0051595"}


id: GO:0021540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the corpus callosum are generated and organized. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres.","definition_xrefs":["GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"corpus callosum development","termid":"GO:0022038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum morphogenesis","termid":"GO:0021540"}


id: PBO:0063583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET100 cytochrome c oxidase chaperone","termid":"PBO:0063583"}


id: GO:0102853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-18:1-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:2-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-18:1-2-18:1-sn-glycerol-3-phosphocholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8320"],"termid":"GO:0102853"}


id: PBO:0055296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2723","termid":"PBO:0055296"}


id: GO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoteichoic acid.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoteichoic acid binding","termid":"GO:0070891"}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: PBO:0055816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein lipase","termid":"PBO:0055816"}


id: PBO:0070778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 8","termid":"PBO:0070778"}


id: GO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar catabolic process","synonyms":[{"name":"nucleotide-sugar breakdown","type":"exact"},{"name":"nucleotide-sugar catabolism","type":"exact"},{"name":"nucleotide-sugar degradation","type":"exact"}],"termid":"GO:0009227"}


id: PBO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name deriviation, Calmodulin-dependent Kinase Kinase","termid":"PBO:0014620"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: GO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II in response to a ligand.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-regulated transcription factor activity (obsolete GO:0003706)","synonyms":[{"name":"ligand-regulated transcription factor activity","type":"exact"}],"termid":"GO:0003706"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: PBO:0079286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 5","termid":"PBO:0079286"}


id: PBO:0081406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 253","termid":"PBO:0081406"}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: GO:0005516
data:
  {"annotated_genes":["SJAG_04498","SJAG_02249","SJAG_02858","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72639,74161,76045,77932],"is_not":false,"summary":null,"term":"GO:0005516"}]},"cv_name":"molecular_function","definition":"Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02249":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calmodulin binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005516","terms_by_termid":{"GO:0005516":null}}


id: PBO:0027700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_centromeric_DNA_separation","termid":"PBO:0027700"}


id: PBO:0078205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-7 (non-functional)","termid":"PBO:0078205"}


id: GO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrophenol biosynthetic process (obsolete GO:0046195)","synonyms":[{"name":"4-nitrophenol anabolism","type":"exact"},{"name":"4-nitrophenol biosynthesis","type":"exact"},{"name":"4-nitrophenol biosynthetic process","type":"exact"},{"name":"4-nitrophenol formation","type":"exact"},{"name":"4-nitrophenol synthesis","type":"exact"}],"termid":"GO:0046195"}


id: PBO:0089928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER DNAJ domain protein Erj5","termid":"PBO:0089928"}


id: PBO:0084946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional enzyme of the folic acid biosynthesis pathway; has dihydropteroate synthetase, dihydro-6-hydroxymethylpterin pyrophosphokinase, and dihydroneopterin aldolase activities","termid":"PBO:0084946"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: PBO:0040229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 1","termid":"PBO:0040229"}


id: PBO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase (predicted)","termid":"PBO:0001398"}


id: PR:O13768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TFIIH basal transcription factor complex helicase XPB subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11274:SF0","PRO:DNx","OMA:SCHPO00720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair helicase ercc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.06","secondary_identifiers":["UniProtKB:O13768"],"synonyms":[{"name":"Spom972h-ERCC3","type":"exact"}],"termid":"PR:O13768"}


id: PBO:0084966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase; confers resistance to the sphingolipid biosynthesis inhibitor myriocin (ISP-1) by converting it into N-acetyl-myriocin, co-operates with Ypk1p in mediating resistance to myriocin","termid":"PBO:0084966"}


id: PR:P41893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low molecular weight phosphotyrosine protein phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01610","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low molecular weight phosphotyrosine protein phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.12c","secondary_identifiers":["UniProtKB:P41893"],"synonyms":[{"name":"PTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACP1","type":"exact"},{"name":"low molecular weight cytosolic acid phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"small tyrosine phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41893"}


id: PBO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like, fibronectin type III and laminin G domains","termid":"PBO:0045953"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: GO:0031930
data:
  {"annotated_genes":["SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84328],"is_not":false,"summary":null,"term":"GO:0031930"}]},"cv_name":"biological_process","definition":"The series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.","definition_xrefs":["GOC:jh","PMID:15068799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitochondria-nucleus signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria-nucleus signal transduction","type":"exact"},{"name":"mitochondrial signaling pathway","type":"exact"},{"name":"mitochondrial signalling pathway","type":"exact"},{"name":"retrograde response","type":"exact"}],"termid":"GO:0031930","terms_by_termid":{"GO:0031930":null}}


id: PBO:0108980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 4","termid":"PBO:0108980"}


id: GO:0097160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.","definition_xrefs":["GOC:sjw","PMID:7583672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polychlorinated biphenyl binding","synonyms":[{"name":"PCB binding","type":"exact"},{"name":"polychlorobiphenyl binding","type":"exact"}],"termid":"GO:0097160"}


id: GO:0097093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"polyacyltrehalose metabolic process","termid":"GO:0097092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose biosynthetic process","synonyms":[{"name":"polyacyltrehalose anabolism","type":"exact"},{"name":"polyacyltrehalose biosynthesis","type":"exact"},{"name":"polyacyltrehalose formation","type":"exact"},{"name":"polyacyltrehalose synthesis","type":"exact"}],"termid":"GO:0097093"}


id: PBO:0066510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X6","termid":"PBO:0066510"}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: GO:0033409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UAU codon-amino acid adaptor activity","synonyms":[{"name":"TAT codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033409"}


id: GO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of octamethylcyclotetrasiloxane into dimethylsilanediol. The former is a tetramer of the latter.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic organosilicon metabolic process","termid":"GO:0018947"},{"relation_name":"is_a","term_name":"dimethylsilanediol metabolic process","termid":"GO:0046454"},{"relation_name":"is_a","term_name":"octamethylcyclotetrasiloxane catabolic process","termid":"GO:0046517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octamethylcyclotetrasiloxane catabolic process to dimethylsilanediol","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"catabolic process of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"catabolism of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"octamethylcyclotetrasiloxane breakdown to dimethylsilanediol","type":"exact"},{"name":"octamethylcyclotetrasiloxane degradation to dimethylsilanediol","type":"exact"}],"termid":"GO:0042210"}


id: PBO:0088594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb2","termid":"PBO:0088594"}


id: GO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within a histone protein.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete histone modification (obsolete GO:0016570)","secondary_identifiers":["Wikipedia:Histone#Histone_modifications_in_chromatin_regulation"],"termid":"GO:0016570"}


id: PBO:0084439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL4","termid":"PBO:0084439"}


id: PBO:0029353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_binding","termid":"PBO:0029353"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: GO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the atrial cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac myofibril assembly","termid":"GO:0055003"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell development","termid":"GO:0055014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac myofibril assembly","synonyms":[{"name":"atrial cardiac myofibril development","type":"exact"},{"name":"atrial heart myofibril development","type":"exact"}],"termid":"GO:0055004"}


id: PBO:0038471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA9 antisense RNA 1","termid":"PBO:0038471"}


id: PBO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q4","termid":"PBO:0043659"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: GO:0045905
data:
  {"annotated_genes":["SJAG_02189","SJAG_02812","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66478,68382,90449],"is_not":false,"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of translational termination","type":"narrow"},{"name":"stimulation of translational termination","type":"narrow"},{"name":"up regulation of translational termination","type":"exact"},{"name":"up-regulation of translational termination","type":"exact"},{"name":"upregulation of translational termination","type":"exact"}],"termid":"GO:0045905","terms_by_termid":{"GO:0045905":null}}


id: GO:2000070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to water deprivation","synonyms":[{"name":"regulation of drought tolerance","type":"related"},{"name":"regulation of response to dehydration","type":"exact"},{"name":"regulation of response to drought","type":"exact"},{"name":"regulation of response to thirst","type":"exact"}],"termid":"GO:2000070"}


id: GO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to lymphocyte anergy, a state of functional inactivation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte anergy","termid":"GO:0002249"}


id: GO:0070370
data:
  {"annotated_genes":["SJAG_03527","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100043,100158],"is_not":false,"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of a cell in response to high temperatures.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat acclimation","termid":"GO:0010286"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular thermotolerance","type":"exact"}],"termid":"GO:0070370","terms_by_termid":{"GO:0070370":null}}


id: PBO:0005677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc2","termid":"PBO:0005677"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_01346","SJAG_04192","SJAG_01455","SJAG_00070","SJAG_00839","SJAG_02648","SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[99475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[104301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[99328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[84430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[102892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[112440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.3.1.-"],"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: PBO:0065602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 extended AT-hook containing adaptor protein","termid":"PBO:0065602"}


id: PBO:0059357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 1","termid":"PBO:0059357"}


id: PBO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative start","termid":"PBO:0002214"}


id: GO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the acrosome from the spermatid Golgi.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"acrosome assembly","synonyms":[{"name":"acrosome formation","type":"exact"}],"termid":"GO:0001675"}


id: PBO:0088092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetyl-glucosamine-1-P transferase; transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in the first step of the dolichol pathway of protein asparagine-linked glycosylation; inhibited by tunicamycin; human homolog DPAGT1 can complement yeast ALG7 mutant","termid":"PBO:0088092"}


id: PBO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear respiratory factor 1","termid":"PBO:0061479"}


id: PBO:0052362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 11","termid":"PBO:0052362"}


id: GO:2000553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell cytokine production","termid":"GO:0002726"},{"relation_name":"is_a","term_name":"positive regulation of type 2 immune response","termid":"GO:0002830"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"positive regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000553"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: PBO:0049749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta","termid":"PBO:0049749"}


id: PBO:0081042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1","termid":"PBO:0081042"}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_00308","SJAG_00286","SJAG_01518","SJAG_05221","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91172,91614,94380,97856,100543],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_03232":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


id: GO:1904854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteasome core complex.","definition_xrefs":["PMID:16096059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome core complex binding","synonyms":[{"name":"20S core complex binding","type":"narrow"},{"name":"20S proteasome binding","type":"narrow"},{"name":"PA28gamma-20S proteasome binding","type":"narrow"},{"name":"macropain binding","type":"exact"}],"termid":"GO:1904854"}


id: GO:0120028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling pathway (obsolete GO:0120028)","termid":"GO:0120028"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: GO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:tb","GOC:add","GOC:dph","PMID:15365173","PMID:15365178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina homeostasis","termid":"GO:0001895"}


id: PBO:0040109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1","termid":"PBO:0040109"}


id: GO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virion in which the nucleic acid is confined.","definition_xrefs":["PMID:14291596","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion nucleoid","termid":"GO:0039642"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: PBO:0044124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 10, pseudogene","termid":"PBO:0044124"}


id: PBO:0038643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 11","termid":"PBO:0038643"}


id: PBO:0060967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor, X-box binding like 1","termid":"PBO:0060967"}


id: GO:0000979
data:
  {"annotated_genes":["SJAG_01523","SJAG_00698","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85416,91254,107864],"is_not":false,"summary":null,"term":"GO:0000979"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence that is part of the core promoter of a RNA polymerase II-transcribed gene.","definition_xrefs":["GOC:txnOH","PMID:12381658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00698":null,"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000979","terms_by_termid":{"GO:0000979":null}}


id: GO:0033621
data:
  {"annotated_genes":["SJAG_04601","SJAG_02382","SJAG_00452","SJAG_02723","SJAG_01867","SJAG_00456","SJAG_02622","SJAG_04768","SJAG_01540","SJAG_01412","SJAG_03454","SJAG_03745","SJAG_04006","SJAG_02720","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82948,86316,86395,87393,87796,92420,94836,100138,103346,105158,105178,107259,114194],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[85288],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[102532],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["PMID:16823445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00456":null,"SJAG_01412":null,"SJAG_01540":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"degradation of meiosis-specific transcripts","type":"exact"},{"name":"mRNA breakdown, meiosis-specific transcripts","type":"exact"},{"name":"mRNA catabolism, meiosis-specific transcripts","type":"exact"},{"name":"mRNA degradation, meiosis-specific transcripts","type":"exact"},{"name":"nuclear mRNA catabolic process, meiosis-specific transcripts","type":"exact"}],"termid":"GO:0033621","terms_by_termid":{"GO:0033621":null,"GO:0120271":null,"GO:0120272":null}}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: GO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by polyamination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyamination","synonyms":[{"name":"protein amino acid polyamination","type":"exact"}],"termid":"GO:0018184"}


id: PBO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 48","termid":"PBO:0047410"}


id: GO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:4-aminoimidazole + H20 = imidazol-4-one + NH3.","definition_xrefs":["RHEA:22348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aminoimidazolase activity","secondary_identifiers":["EC:3.5.4.8","MetaCyc:R13-RXN"],"synonyms":[{"name":"4-aminoimidazole aminohydrolase activity","type":"related"},{"name":"4-aminoimidazole hydrolase activity","type":"related"}],"termid":"GO:0047664"}


id: PBO:0059831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal regulatory transcription factor 1","termid":"PBO:0059831"}


id: GO:0050916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sweet taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sweet taste","synonyms":[{"name":"sweet taste perception","type":"exact"}],"termid":"GO:0050916"}


id: PBO:0065363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 4","termid":"PBO:0065363"}


id: FYPO:0003725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003725"}


id: PBO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap95","termid":"PBO:0002106"}


id: PBO:0014288
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meier-Gorlin syndrome","termid":"PBO:0014288"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: PBO:0072016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 3","termid":"PBO:0072016"}


id: PBO:0056463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 1","termid":"PBO:0056463"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: PBO:0079786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A7","termid":"PBO:0079786"}


id: PBO:0014595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP4 complex subunit Psy2 (predicted)","termid":"PBO:0014595"}


id: PR:P79051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase rhp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.01c","synonyms":[{"name":"DNA repair protein rhp16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD16 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp16","type":"exact"}],"termid":"PR:P79051"}


id: GO:1903574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cellular response to amino acid starvation.","definition_xrefs":["PMID:11381086","GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"negatively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to amino acid starvation","synonyms":[{"name":"down regulation of cellular response to amino acid starvation","type":"exact"},{"name":"down-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"downregulation of cellular response to amino acid starvation","type":"exact"},{"name":"inhibition of cellular response to amino acid starvation","type":"narrow"}],"termid":"GO:1903574"}


id: GO:0015789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-N-acetylgalactosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transport","synonyms":[{"name":"UDP-N-acetylgalactosamine transport","type":"related"}],"termid":"GO:0015789"}


id: GO:0006793
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metabolism","type":"exact"}],"termid":"GO:0006793","terms_by_termid":{"GO:0006002":null,"GO:0006003":null,"GO:0006011":null,"GO:0006015":null,"GO:0006048":null,"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006096":null,"GO:0006104":null,"GO:0006116":null,"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0006198":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006256":null,"GO:0006505":null,"GO:0006506":null,"GO:0006637":null,"GO:0006644":null,"GO:0006646":null,"GO:0006654":null,"GO:0006656":null,"GO:0006657":null,"GO:0006658":null,"GO:0006659":null,"GO:0006660":null,"GO:0006661":null,"GO:0006673":null,"GO:0006675":null,"GO:0006734":null,"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0006747":null,"GO:0006797":null,"GO:0006798":null,"GO:0006799":null,"GO:0008654":null,"GO:0009051":null,"GO:0009052":null,"GO:0009117":null,"GO:0009132":null,"GO:0009134":null,"GO:0009141":null,"GO:0009152":null,"GO:0009156":null,"GO:0009159":null,"GO:0009187":null,"GO:0009191":null,"GO:0009204":null,"GO:0009212":null,"GO:0009216":null,"GO:0009224":null,"GO:0009229":null,"GO:0009240":null,"GO:0009262":null,"GO:0009265":null,"GO:0009395":null,"GO:0009398":null,"GO:0009435":null,"GO:0009443":null,"GO:0010142":null,"GO:0010144":null,"GO:0015937":null,"GO:0015938":null,"GO:0015959":null,"GO:0015964":null,"GO:0015966":null,"GO:0015986":null,"GO:0016024":null,"GO:0016255":null,"GO:0019255":null,"GO:0019287":null,"GO:0019358":null,"GO:0019427":null,"GO:0019674":null,"GO:0019677":null,"GO:0019693":null,"GO:0030388":null,"GO:0032049":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0032958":null,"GO:0033384":null,"GO:0033386":null,"GO:0033512":null,"GO:0034355":null,"GO:0034356":null,"GO:0034638":null,"GO:0035336":null,"GO:0035338":null,"GO:0035863":null,"GO:0035965":null,"GO:0036001":null,"GO:0036092":null,"GO:0036149":null,"GO:0042776":null,"GO:0042823":null,"GO:0043048":null,"GO:0043456":null,"GO:0043647":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0045337":null,"GO:0045338":null,"GO:0045820":null,"GO:0046033":null,"GO:0046034":null,"GO:0046036":null,"GO:0046037":null,"GO:0046040":null,"GO:0046081":null,"GO:0046166":null,"GO:0046168":null,"GO:0046390":null,"GO:0046434":null,"GO:0046444":null,"GO:0046474":null,"GO:0046475":null,"GO:0046488":null,"GO:0046496":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0046854":null,"GO:0050428":null,"GO:0050992":null,"GO:0051156":null,"GO:0051999":null,"GO:0052574":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0071072":null,"GO:0071543":null,"GO:0071545":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null,"GO:1905706":null,"GO:1905857":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription involved in the meiotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in meiotic cell cycle (obsolete GO:0051038)","synonyms":[{"name":"down regulation of transcription during meiosis","type":"exact"},{"name":"down-regulation of transcription during meiosis","type":"exact"},{"name":"downregulation of transcription during meiosis","type":"exact"},{"name":"inhibition of transcription during meiosis","type":"narrow"},{"name":"meiotic repression of transcription","type":"exact"},{"name":"negative regulation of meiotic transcription","type":"exact"},{"name":"negative regulation of transcription, meiotic","type":"exact"}],"termid":"GO:0051038"}


id: PBO:0074440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 41","termid":"PBO:0074440"}


id: GO:0019056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of its host's transcription.","definition_xrefs":["PMID:7799962"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host transcription (obsolete GO:0019056)","synonyms":[{"name":"modification of host transcription","type":"exact"},{"name":"modulation by virus of host transcription","type":"narrow"},{"name":"perturbation of host cell transcription","type":"exact"}],"termid":"GO:0019056"}


id: GO:0019218
data:
  {"annotated_genes":["SJAG_02044","SJAG_02104","SJAG_04018","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101705,84047,84046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid metabolism","type":"exact"}],"termid":"GO:0019218","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of estrogen receptor binding, interacting selectively with an estrogen receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of estrogen receptor binding (obsolete GO:0071899)","termid":"GO:0071899"}


id: FYPO:0001465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases to a lesser extent than normal immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","termid":"FYPO:0001463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"reduced immediate intracellular calcium spike following extracellular calcium stimulus","type":"exact"}],"termid":"FYPO:0001465"}


id: PBO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARIN3 pseudogene 1","termid":"PBO:0048379"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: PBO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 subunit alpha' interacting protein","termid":"PBO:0044026"}


id: PBO:0013469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6","termid":"PBO:0013469"}


id: PR:Q09928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.05c","secondary_identifiers":["UniProtKB:Q09928"],"synonyms":[{"name":"PPIase cyp8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL2","type":"exact"},{"name":"rotamase cyp8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09928"}


id: GO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid membrane (obsolete GO:0031351)","synonyms":[{"name":"integral to plastid membrane","type":"narrow"}],"termid":"GO:0031351"}


id: GO:1901995
data:
  {"annotated_genes":["SJAG_00145","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[90818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle phase transition.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle transition","type":"broad"},{"name":"activation of meiotic cell cycle phase transition","type":"narrow"},{"name":"positive regulation of cell cycle transition","type":"broad"},{"name":"up regulation of cell cycle transition","type":"broad"},{"name":"up regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"broad"},{"name":"up-regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"broad"},{"name":"upregulation of meiotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901995","terms_by_termid":{"GO:0110032":null,"GO:1905191":null}}


id: GO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005237"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"extracellularly glycine-gated ion channel activity","termid":"GO:0016933"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellularly glycine-gated chloride channel activity","secondary_identifiers":["GO:0004891","Reactome:R-HSA-975389"],"synonyms":[{"name":"extracellular-glycine-gated chloride channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"},{"name":"glycine-inhibited chloride channel activity","type":"related"}],"termid":"GO:0016934"}


id: GO:0102883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-beta-chamigrene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.78","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(+)-beta-chamigrene synthase activity","secondary_identifiers":["MetaCyc:RXN-8424","RHEA:30379"],"termid":"GO:0102883"}


id: PBO:0052763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 55","termid":"PBO:0052763"}


id: PBO:0041162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 1","termid":"PBO:0041162"}


id: PBO:0084272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localizes primarily to growing sites such as the bud tip or the cell periphery; potential Cdc28p substrate; Skg6p interacts with Zds1p and Zds2p; SKG6 has a paralog, TOS2, that arose from the whole genome duplication","termid":"PBO:0084272"}


id: PBO:0053424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 366","termid":"PBO:0053424"}


id: PBO:0053850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1119","termid":"PBO:0053850"}


id: PBO:0039738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein H","termid":"PBO:0039738"}


id: FYPO:0003783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is abnormal, resulting in an abnormal spatial arrangement of nuclear pores within the nuclear envelope, during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nuclear pore localization during mitosis","synonyms":[{"name":"abnormal NPC localization during mitosis","type":"exact"},{"name":"abnormal nuclear pore complex localization during mitosis","type":"exact"},{"name":"abnormal nuclear pore distribution during mitosis","type":"exact"},{"name":"abnormal nuclear pore localisation during mitosis","type":"exact"},{"name":"abnormal nuclear pore localization during mitosis during vegetative growth","type":"exact"},{"name":"abnormal nuclear pore localization during mitotic M phase","type":"related"},{"name":"abnormal nuclear pore localization during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003783"}


id: PBO:0085683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; interacts with ESCRT-1 subunits Stp22p and Vps28p; essential for anaerobic growth; member of the arrestin-related trafficking adaptor family","termid":"PBO:0085683"}


id: GO:0033447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"AGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033447"}


id: PBO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0000328"}


id: PBO:0046519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor responsive lncRNA 1","termid":"PBO:0046519"}


id: GO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["GOC:mah","PMID:11960741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxylipin metabolic process","synonyms":[{"name":"oxylipin metabolism","type":"exact"}],"termid":"GO:0031407"}


id: GO:0033113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a cyanelle and form the cyanelle envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle membrane","termid":"GO:0033113"}


id: GO:0090355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"positively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin metabolic process","synonyms":[{"name":"positive regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090355"}


id: PBO:0063198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 29","termid":"PBO:0063198"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: MOD:01344
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical with MOD:00835. Remap to MOD:00835.","definition_xrefs":["PubMed:9276974","PubMed:9252331","Unimod:401"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01344 dehydrogenated residue - site S (obsolete MOD:01344)","synonyms":[{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"}],"termid":"MOD:01344"}


id: PBO:0057271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 495","termid":"PBO:0057271"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: GO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from 5,10-methylenetetrahydrofolate to the C5 atom of the uridine residue at position 54 in a tRNA molecule. This occurs in most Gram-positive bacteria and some Gram-negative bacteria.","definition_xrefs":["ISBN:1555811337","GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity (obsolete GO:0030698)","synonyms":[{"name":"RUMT","type":"broad"}],"termid":"GO:0030698"}


id: GO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Granule free cytoplasm, lying immediately below the plasma membrane.","definition_xrefs":["PMID:12211103","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ectoplasm (obsolete GO:0043265)","termid":"GO:0043265"}


id: PBO:0072858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha and TIR motif containing 1","termid":"PBO:0072858"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: GO:1900210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of cardiolipin metabolic process","synonyms":[{"name":"activation of cardiolipin metabolic process","type":"narrow"},{"name":"activation of cardiolipin metabolism","type":"exact"},{"name":"activation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"activation of diphosphatidylglycerol metabolism","type":"related"},{"name":"positive regulation of cardiolipin metabolism","type":"exact"},{"name":"positive regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"positive regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"up regulation of cardiolipin metabolic process","type":"exact"},{"name":"up regulation of cardiolipin metabolism","type":"exact"},{"name":"up regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"up regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"up-regulation of cardiolipin metabolic process","type":"exact"},{"name":"up-regulation of cardiolipin metabolism","type":"exact"},{"name":"up-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"up-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"upregulation of cardiolipin metabolic process","type":"exact"},{"name":"upregulation of cardiolipin metabolism","type":"exact"},{"name":"upregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"upregulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900210"}


id: PBO:0027827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_G0_phase","termid":"PBO:0027827"}


id: PBO:0082332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK","termid":"PBO:0082332"}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: PR:P87050
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdr2 gene.","definition_xrefs":["UniProtKB:P87050","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"Spom972h-cdr2","type":"exact"}],"termid":"PR:P87050"}


id: GO:0097722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a sperm cell.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm motility","synonyms":[{"name":"sperm movement","type":"exact"}],"termid":"GO:0097722"}


id: PBO:0051711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INS-IGF2 readthrough","termid":"PBO:0051711"}


id: PBO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_cell_cycle","termid":"PBO:0031282"}


id: PBO:0072010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 12","termid":"PBO:0072010"}


id: PBO:0072784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B2","termid":"PBO:0072784"}


id: PBO:0077924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 15","termid":"PBO:0077924"}


id: GO:0070146
data:
  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114139],"is_not":false,"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA in a mitochondrion, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0140053","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"mitochondrial aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070146","terms_by_termid":{"GO:0070146":null}}


id: PBO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp10","termid":"PBO:0003543"}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:22579284","GO_REF:0000058","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: PBO:0068053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 358","termid":"PBO:0068053"}


id: PATO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000989 absolute consistency value (obsolete PATO:0000989)","termid":"PATO:0000989"}


id: PBO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 gamma pseudogene 1","termid":"PBO:0050293"}


id: PBO:0065925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member RAS oncogene family like 6","termid":"PBO:0065925"}


id: GO:0160135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:35284927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating endothelin receptor signaling pathway","termid":"GO:0160135"}


id: PBO:0078500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-3","termid":"PBO:0078500"}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: GO:0034035
data:
  {"annotated_genes":["SJAG_00084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050428"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034035","terms_by_termid":{"GO:0050428":null}}


id: PBO:0039827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 1","termid":"PBO:0039827"}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-mercaptobenzothiazole monooxygenase activity","secondary_identifiers":["EC:1.13.12.-"],"termid":"GO:0034835"}


id: GO:0061769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinate + ATP = ADP + 2 H+ + nicotinate mononucleotide.","definition_xrefs":["GOC:dph","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"ribosylnicotinate kinase activity","secondary_identifiers":["Reactome:R-HSA-8869607","Reactome:R-HSA-8869606"],"termid":"GO:0061769"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: PBO:0070422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase like 1","termid":"PBO:0070422"}


id: PBO:0058518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5706","termid":"PBO:0058518"}


id: GO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"}


id: GO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (pseudouridine) methyltransferase activity","termid":"GO:0070037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rRNA (pseudouridine-N3-)-methyltransferase activity","termid":"GO:0070038"}


id: PBO:0059283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L40 pseudogene 1","termid":"PBO:0059283"}


id: PBO:0080652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 1","termid":"PBO:0080652"}


id: PBO:0079939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH1 protein network component harmonin","termid":"PBO:0079939"}


id: MOD:00302
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine.","definition_xrefs":["PubMed:15649890","RESID:AA0297","PubMed:10037765","Unimod:429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine","synonyms":[{"name":"CARBOHYD O-linked (Man1P) serine","type":"exact"},{"name":"O-(D-mannose-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-(alpha-D-mannosyl-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-[alpha-D-mannopyranosyloxy(hydroxy)phosphoryl]-L-serine","type":"exact"},{"name":"O3-(D-mannose-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine alpha-D-mannopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHex","type":"related"},{"name":"phosphoglycosyl-D-mannose-1-phosphoryl","type":"related"}],"termid":"MOD:00302"}


id: GO:0034204
data:
  {"annotated_genes":["SJAG_06440","SJAG_03050","SJAG_02943","SJAG_00589","SJAG_02114","SJAG_00669","SJAG_00587","SJAG_05209","SJAG_00018","SJAG_01095","SJAG_02581","SJAG_01945","SJAG_00576","SJAG_02957","SJAG_01731","SJAG_01470","SJAG_02897","SJAG_00230","SJAG_03774","SJAG_02132","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60612],"is_not":false,"summary":null,"term":"GO:0034204"},{"annotations":[68495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[90054,108549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[86029,86031,86035,86033,98127,86030,105443,95934,108484,86034,90056,86032,86036,95205,86037,97063,100915,93641,98008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[92314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of lipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"regulation of membrane lipid distribution","termid":"GO:0097035"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03774":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"lipid translocation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"intramembrane lipid transfer","type":"exact"}],"termid":"GO:0034204","terms_by_termid":{"GO:0017121":null,"GO:0034203":null,"GO:0034204":null,"GO:0045332":null,"GO:0140331":null}}


id: FYPO:0007534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PMID:30282034","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007534"}


id: GO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of folate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to folate","termid":"GO:0043326"}


id: PBO:0082611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme Q (ubiquinone) binding protein; functions in the delivery of Q<sub>6</sub> to its proper location for electron transport during respiration; START domain protein with homologs in bacteria and eukaryotes; respiratory growth defect of the null mutant is functionally complemented by human COQ10A","termid":"PBO:0082611"}


id: PBO:0082352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subunits; similar to Pos5p; overexpression complements certain pos5 phenotypes; YEF1 has a paralog, UTR1, that arose from the whole genome duplication","termid":"PBO:0082352"}


id: PBO:0001194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor Mtf1","termid":"PBO:0001194"}


id: PBO:0027429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0027429"}


id: GO:0052883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = NH4 + trans-4-coumarate.","definition_xrefs":["RHEA:24906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tyrosine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.25","EC:4.3.1.23"],"synonyms":[{"name":"L-tyrosine ammonia-lyase activity","type":"related"},{"name":"TAL activity","type":"broad"},{"name":"tyrase activity","type":"broad"}],"termid":"GO:0052883"}


id: GO:0140823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2B-serine (position 36) + ATP = histone H2B-phosphoserine (position 36) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 36 of histone H2B.","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2B kinase activity","termid":"GO:0140998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0004672","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H2BS36 kinase activity","synonyms":[{"name":"histone H2B-S36 kinase activity","type":"exact"},{"name":"histone kinase activity (H2B-S36 specific)","type":"exact"}],"termid":"GO:0140823"}


id: PBO:0111889
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead domain","termid":"PBO:0111889"}


id: PBO:0028496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028496"}


id: PBO:0065316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40A (pseudogene)","termid":"PBO:0065316"}


id: GO:1902976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"premeiotic DNA replication preinitiation complex assembly","synonyms":[{"name":"DNA replication preinitiation complex formation involved in meiotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in meiotic cell cycle","type":"exact"}],"termid":"GO:1902976"}


id: PBO:0041714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 5","termid":"PBO:0041714"}


id: PBO:0084255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol monophosphatase; involved in biosynthesis of inositol; enzymatic activity requires magnesium ions and is inhibited by lithium and sodium ions; inm1 inm2 double mutant lacks inositol auxotrophy","termid":"PBO:0084255"}


id: FYPO:0001576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on dipeptide nitrogen source","synonyms":[{"name":"abolished dipeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"cell population growth on dipeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001576"}


id: PBO:0045947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu GTP binding domain containing 2","termid":"PBO:0045947"}


id: PBO:0038877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 4","termid":"PBO:0038877"}


id: PBO:0055407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2837","termid":"PBO:0055407"}


id: GO:0102735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + 3 malonyl-CoA + 3 H+ = 2,4,6-trihydroxybenzophenone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz","RHEA:35143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trihydroxybenzophenone synthase activity","secondary_identifiers":["EC:2.3.1.220","MetaCyc:RXN-7481"],"termid":"GO:0102735"}


id: PBO:0029944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_curved_cells_(obsolete_FYPO:0002293)","termid":"PBO:0029944"}


id: GO:0106417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopaminechrome = 5,6-dihydroxyindole.","definition_xrefs":["RHEA:70199","PMID:34388859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dopaminechrome tautomerase activity","termid":"GO:0106417"}


id: PR:O14206
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A suppressor of SWI4 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12661:SF3","PRO:DNx","OMA:SCHPO01002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brix domain-containing protein C1B9.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.03c","secondary_identifiers":["UniProtKB:O14206"],"synonyms":[{"name":"Spom972h-PPAN","type":"exact"}],"termid":"PR:O14206"}


id: PBO:0062659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 9","termid":"PBO:0062659"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_01787","SJAG_00845","SJAG_02392","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86293,91527,99531,106713,115433],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: GO:0075208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075208)","synonyms":[{"name":"modulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075208"}


id: PBO:0069946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1239, pseudogene","termid":"PBO:0069946"}


id: FYPO:0007737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is greater than normal.","definition_xrefs":["GO:0051881","PMID:33823662","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion","termid":"FYPO:0004943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitochondrial membrane potential","synonyms":[{"name":"increased mitochondrial membrane polarization","type":"exact"},{"name":"increased mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial membrane potential during vegetative growth","type":"exact"},{"name":"mitochondrial membrane hyperpolarization","type":"related"}],"termid":"FYPO:0007737"}


id: GO:1901111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of actinorhodin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"actinorhodin metabolic process","termid":"GO:1901110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"actinorhodin catabolic process","synonyms":[{"name":"actinorhodin breakdown","type":"exact"},{"name":"actinorhodin catabolism","type":"exact"},{"name":"actinorhodin degradation","type":"exact"}],"termid":"GO:1901111"}


id: FYPO:0004670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is abnormal when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah","GO:0016236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal macroautophagy during nitrogen starvation","synonyms":[{"name":"abnormal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal macroautophagy during nitrogen depletion","type":"exact"},{"name":"abnormal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004670"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: PBO:0074862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 48","termid":"PBO:0074862"}


id: GO:0045951
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87712],"is_not":false,"summary":null,"term":"GO:0045951"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic recombination","type":"narrow"},{"name":"positive regulation of recombination within rDNA repeats","type":"narrow"},{"name":"stimulation of mitotic recombination","type":"narrow"},{"name":"up regulation of mitotic recombination","type":"exact"},{"name":"up-regulation of mitotic recombination","type":"exact"},{"name":"upregulation of mitotic recombination","type":"exact"}],"termid":"GO:0045951","terms_by_termid":{"GO:0045951":null}}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: GO:0005786
data:
  {"annotated_genes":["SJAG_03411","SJAG_02456","SJAG_01759","SJAG_03684","SJAG_01840","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86354,87153,110415,111188,112007,112731],"is_not":false,"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA. Examples of this component are found in Mus musculus, Saccharomyces cerevisiae and Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, endoplasmic reticulum targeting","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle","GO:0005855"],"synonyms":[{"name":"SRP","type":"exact"},{"name":"signal sequence receptor complex","type":"exact"}],"termid":"GO:0005786","terms_by_termid":{"GO:0005786":null}}


id: GO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a cysteine residue of a glycated protein.","definition_xrefs":["GOC:PARL","PMID:25416785","PMID:14568004","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine deglycation","synonyms":[{"name":"deglycation of N-acetylcysteine","type":"related"}],"termid":"GO:0036526"}


id: GO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin that modulates the rate, frequency or extent of DNA-dependent transcription.","definition_xrefs":["PMID:21102443","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin organization involved in regulation of transcription (obsolete GO:0034401)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"establishment or maintenance of chromatin architecture during transcription","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"positive regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription by chromatin organisation","type":"exact"},{"name":"regulation of transcription by chromatin organization","type":"exact"},{"name":"regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up regulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up-regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"upregulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"upregulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"}],"termid":"GO:0034401"}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10130:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0051189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-7 (pseudogene)","termid":"PBO:0051189"}


id: PBO:0070938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 46","termid":"PBO:0070938"}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling pathway (obsolete GO:0120027)","termid":"GO:0120027"}


id: PBO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi membrane protein 2","termid":"PBO:0048929"}


id: PBO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc4","termid":"PBO:0003467"}


id: GO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to linoleic acid","termid":"GO:0070543"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to linoleic acid","synonyms":[{"name":"cellular response to linoleate","type":"exact"}],"termid":"GO:0071399"}


id: PBO:0027873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027873"}


id: PBO:0074168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G5","termid":"PBO:0074168"}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: PBO:0076933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 1","termid":"PBO:0076933"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: GO:0050193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + phosphate = acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["EC:4.1.2.9","MetaCyc:PHOSPHOKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoketolase activity","secondary_identifiers":["RHEA:10468"],"synonyms":[{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (phosphate-acetylating) activity","type":"related"},{"name":"xylulose-5-phosphate phosphoketolase activity","type":"related"}],"termid":"GO:0050193"}


id: PBO:0049860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW2 antisense RNA 1","termid":"PBO:0049860"}


id: PBO:0039354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 4","termid":"PBO:0039354"}


id: PATO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficient","synonyms":[{"name":"adequate","type":"related"}],"termid":"PATO:0001627"}


id: PBO:0058719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6847","termid":"PBO:0058719"}


id: PBO:0088352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldo-keto reductase family protein","termid":"PBO:0088352"}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: PBO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3","termid":"PBO:0090035"}


id: PBO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 27","termid":"PBO:0070848"}


id: GO:0097127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B3 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin B3-CDK2 complex","termid":"GO:0097127"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0087823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (67 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087823"}


id: GO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric sinus over time, from its formation to the mature structure. The pronephric sinus is an ill-defined capillary network that lies between the pronephric tubules.","definition_xrefs":["PMID:10535314","XAO:0000385","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric sinus development","termid":"GO:0039012"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: PBO:0027124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomere-nuclear_envelope_distance_during_mitotic_M_phase","termid":"PBO:0027124"}


id: PBO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transmembrane transporter Zhf1","termid":"PBO:0017636"}


id: PBO:0068877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 117, pseudogene","termid":"PBO:0068877"}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["GO:0006514"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: FYPO:0001267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur when the cell is subject to a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear export during cellular hypotonic salinity response","synonyms":[{"name":"abolished nuclear export during cellular hypotonic salinity response during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during cellular hypotonic salinity response","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to salt starvation abolished","type":"exact"}],"termid":"FYPO:0001267"}


id: GO:0012502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death","secondary_identifiers":["GO:0012503"],"synonyms":[{"name":"induction of non-apoptotic programmed cell death","type":"narrow"},{"name":"induction of nonapoptotic programmed cell death","type":"narrow"}],"termid":"GO:0012502"}


id: PBO:0061575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 gamma (pseudogene)","termid":"PBO:0061575"}


id: PBO:0087769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087769"}


id: PATO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased flexibility","synonyms":[{"name":"high flexibility","type":"exact"}],"termid":"PATO:0001776"}


id: GO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:32139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"malonyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12359","EC:6.2.1.76"],"termid":"GO:0090409"}


id: PBO:0061488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor interacting protein 1","termid":"PBO:0061488"}


id: PBO:0077664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11a","termid":"PBO:0077664"}


id: GO:0035252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group from UDP-xylose to an acceptor molecule.","definition_xrefs":["PMID:30127001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5617138","Reactome:R-HSA-9638090","Reactome:R-HSA-6785668"],"termid":"GO:0035252"}


id: GO:1904213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:20392814","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"},{"relation_name":"is_a","term_name":"negative regulation of iodide transport","termid":"GO:1904202"},{"relation_name":"is_a","term_name":"regulation of iodide transmembrane transport","termid":"GO:1904212"},{"relation_name":"negatively_regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iodide transmembrane transport","synonyms":[{"name":"down regulation of iodide transmembrane transport","type":"exact"},{"name":"down-regulation of iodide transmembrane transport","type":"exact"},{"name":"downregulation of iodide transmembrane transport","type":"exact"},{"name":"inhibition of iodide transmembrane transport","type":"narrow"}],"termid":"GO:1904213"}


id: PBO:0055260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2687","termid":"PBO:0055260"}


id: FYPO:0003053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is increased (i.e. occurs to a greater extent) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PomBase:mah","PMID:23117617","PMID:24173580","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"increased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"increased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"increased synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003053"}


id: PBO:0044956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 3","termid":"PBO:0044956"}


id: PBO:0069565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 837, pseudogene","termid":"PBO:0069565"}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11805081","PMID:19801898","PMID:18037263","PMID:29571981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing by symbiont of host cells","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0060139","GO:0033669","GO:0052030","GO:0039651"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


