# terms

id: GO:0043769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of four polypeptides, a telomere-protecting terminal protein (Tpg), a telomere-associated protein (Tap), DNA polymerase (PolA) and topoisomerase I (TopA), that functions in the replication of the telomeric regions of linear chromosomes, plasmids and circular replicons of some bacterial species.","definition_xrefs":["PMID:15353591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere cap complex","termid":"GO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Tpg-containing telomere binding complex","synonyms":[{"name":"telomere complex","type":"broad"}],"termid":"GO:0043769"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: MOD:00523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2dHex1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(1)Pent(1)","type":"related"},{"name":"Hex1HexNAc2dHex1Pent1","type":"related"}],"termid":"MOD:00523"}


id: FYPO:0001089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased glucosyltransferase activity","termid":"FYPO:0001089"}


id: GO:0090480
data:
  {"annotated_genes":["SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[84468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"}]},"cv_name":"biological_process","definition":"The process in which a purine nucleotide-sugar is transported across a membrane. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transport","termid":"GO:0015780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"purine nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0036079"],"synonyms":[{"name":"purine nucleotide-sugar membrane transport","type":"exact"},{"name":"purine nucleotide-sugar transport","type":"related"}],"termid":"GO:0090480","terms_by_termid":{"GO:0036085":null,"GO:1990570":null}}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: PBO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2527","termid":"PBO:0055109"}


id: GO:0050670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte proliferation","termid":"GO:0050670"}


id: PBO:0080588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 12","termid":"PBO:0080588"}


id: PBO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde2 (predicted)","termid":"PBO:0016946"}


id: GO:0006155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosine deaminase reaction (obsolete GO:0006155)","synonyms":[{"name":"adenosine deaminase reaction","type":"exact"}],"termid":"GO:0006155"}


id: PBO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 25","termid":"PBO:0071419"}


id: PATO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased diameter","termid":"PATO:0001715"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased anterior-posterior diameter","synonyms":[{"name":"low anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002042"}


id: GO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a lipopolysaccharide (LPS) on the host cell surface.","definition_xrefs":["GOC:bm","GOC:bf","PMID:12837775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated virion attachment to host cell","synonyms":[{"name":"LPS binding involved in viral attachment to host cell","type":"exact"},{"name":"lipopolysaccharide binding involved in viral attachment to host cell","type":"exact"},{"name":"virion attachment, binding to host lipopolysaccharide","type":"exact"}],"termid":"GO:0039638"}


id: PBO:0073392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 6 pseudogene 1","termid":"PBO:0073392"}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"gap junction assembly","termid":"GO:0016264"}


id: SO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000064 gene_by_transcript_attribute (obsolete SO:0000064)","termid":"SO:0000064"}


id: GO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0046142)","synonyms":[{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0046142"}


id: PBO:0056966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23c","termid":"PBO:0056966"}


id: GO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligodendrocytes from the subpallium to the cerebral cortex during forebrain development.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte cell migration from the subpallium to the cortex","termid":"GO:0021829"}


id: PBO:0074151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1","termid":"PBO:0074151"}


id: SO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A T-cell receptor germline gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene","termid":"SO:0002121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_cell_receptor_gene","synonyms":[{"name":"TR_gene","type":"exact"}],"termid":"SO:0002133"}


id: GO:0007567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parturition","synonyms":[{"name":"egg laying","type":"narrow"},{"name":"giving birth","type":"exact"}],"termid":"GO:0007567"}


id: PBO:0080840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 4","termid":"PBO:0080840"}


id: PBO:0029370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029370"}


id: PATO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting reduced activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased behavioural activity","synonyms":[{"name":"hypoactive","type":"exact"}],"termid":"PATO:0000761"}


id: PBO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (predicted)","termid":"PBO:0002198"}


id: PR:P87152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator spt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.11c","synonyms":[{"name":"Spom972h-spt7","type":"exact"}],"termid":"PR:P87152"}


id: PBO:0069171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 424, pseudogene","termid":"PBO:0069171"}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: GO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound catabolic process","synonyms":[{"name":"toluene and derivative catabolic process","type":"exact"},{"name":"toluene-containing compound breakdown","type":"exact"},{"name":"toluene-containing compound catabolism","type":"exact"},{"name":"toluene-containing compound degradation","type":"exact"}],"termid":"GO:0072491"}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: FYPO:0003762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle spindle assembly checkpoint is normal (i.e. indistinguishable from wild type). The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0000257","FYPO:0001312","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic spindle assembly checkpoint","synonyms":[{"name":"normal mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"normal mitotic spindle assembly checkpoint activation","type":"related"},{"name":"normal spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal spindle assembly checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0003762"}


id: GO:0099400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane microdomain that forms a necklace around the bulb (crater) of a caveola. Intramembrane particles are concentrated in this region and cytoskeletal components, including actin, are highly enriched in the area underlying it.","definition_xrefs":["GOC:pad","GOC:PARL","PMID:17227843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"caveola neck","termid":"GO:0099400"}


id: GO:0034295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which spores form outside a specialized end cell known as a basidium. Basidia are characteristic of the basidiomycete fungi (phylum Basidiomycota), and give rise to spores that each contain a haploid nucleus that is the product of meiosis. The spores are usually attached to the basidium by short spikes called sterigmata (singular: sterigma). In most basidiomycetes there are four sterigmata (and four spores) to a basidium.","definition_xrefs":["GOC:mah","GOC:ds","GOC:di","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"basidiospore formation","termid":"GO:0034295"}


id: GO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body.","definition_xrefs":["PMID:12230507","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair cycle","termid":"GO:0042633"}


id: FYPO:0004431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone. Cells stop growing (and may die) at a concentration of 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","synonyms":[{"name":"hypersensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","type":"exact"},{"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone during mitotic cell cycle","type":"related"},{"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone during vegetative growth","type":"exact"}],"termid":"FYPO:0004431"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"https://github.com/geneontology/go-ontology/issues/26942","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: GO:0006672
data:
  {"annotated_genes":["SJAG_02085","SJAG_01219","SJAG_01057","SJAG_04550","SJAG_04178","SJAG_02842","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97948],"is_not":false,"summary":null,"term":"GO:0006672"},{"annotations":[87437,106008,88389,104733,101383,105648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramides, any N-acylated sphingoid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide metabolism","type":"exact"}],"termid":"GO:0006672","terms_by_termid":{"GO:0006672":null,"GO:0046513":null}}


id: PBO:0087921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress","termid":"PBO:0087921"}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["EC:3.1.2.7","RHEA:22708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["KEGG_REACTION:R00547","MetaCyc:GLUTATHIONE-THIOESTERASE-RXN"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PR:O60064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannose-1-phosphate guanyltransferase alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22572:SF15","OMA:SCHPO03828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.02","secondary_identifiers":["UniProtKB:O60064"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"GTP-mannose-1-phosphate guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"Spom972h-GMPPA","type":"exact"}],"termid":"PR:O60064"}


id: PBO:0080497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor","termid":"PBO:0080497"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aspartate-2-keto-4-methylthiobutyrate transaminase activity","termid":"GO:0046571"}


id: PBO:0073268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 12","termid":"PBO:0073268"}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: PBO:0060784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10 pseudogene 2","termid":"PBO:0060784"}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: PBO:0080943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1 like","termid":"PBO:0080943"}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: PBO:0082276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ankyrin repeat-containing protein; member of a family of putative palmitoyltransferases containing an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; possibly involved in constitutive endocytosis of Ste3p; AKR2 has a paralog, AKR1, that arose from the whole genome duplication","termid":"PBO:0082276"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: PBO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 1","termid":"PBO:0042531"}


id: PBO:0049891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 10","termid":"PBO:0049891"}


id: GO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung vasculature development","synonyms":[{"name":"pulmonary vasculature development","type":"exact"}],"termid":"GO:0060426"}


id: GO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 = 2-phenylacetamide + CO2 + H2O.","definition_xrefs":["RHEA:10712","EC:1.13.12.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylalanine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00690","MetaCyc:PHENYLALANINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-phenylalanine oxidase (deaminating and decarboxylating)","type":"related"},{"name":"L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"l-phenylalanine oxidase (deaminating and decarboxylating) activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating) oxidase activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating)oxidase activity","type":"related"}],"termid":"GO:0050172"}


id: GO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cuticle pigmentation","synonyms":[{"name":"activation of cuticle pigmentation","type":"narrow"},{"name":"stimulation of cuticle pigmentation","type":"narrow"},{"name":"up regulation of cuticle pigmentation","type":"exact"},{"name":"up-regulation of cuticle pigmentation","type":"exact"},{"name":"upregulation of cuticle pigmentation","type":"exact"}],"termid":"GO:0048081"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: FYPO:0007530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 does not occur at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007530"}


id: GO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont protein (obsolete GO:0052417)","termid":"GO:0052417"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: PBO:0066571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh family B glycoprotein","termid":"PBO:0066571"}


id: PBO:0088435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Iwr1","termid":"PBO:0088435"}


id: PR:Q9Y7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG family protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.05c","secondary_identifiers":["UniProtKB:Q9Y7R5"],"synonyms":[{"name":"SPCC306.05c","type":"related"},{"name":"Spom972h-INSIG1","type":"exact"}],"termid":"PR:Q9Y7R5"}


id: PBO:0078630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif family like 1","termid":"PBO:0078630"}


id: PR:Q9UT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase lsb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.19","synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsb6","type":"exact"}],"termid":"PR:Q9UT42"}


id: PBO:0083352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene IES1/YFL013C","termid":"PBO:0083352"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:17693253","PMID:23151511","PMID:15165191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: GO:0039502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type I interferon-mediated signaling in the host organism. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:sp","PMID:19802576","PMID:26712804","GOC:bf","PMID:32464097","PMID:33097660","PMID:32733001","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type I interferon-mediated signaling pathway","secondary_identifiers":["VZ:883"],"synonyms":[{"name":"inhibition of host interferon signaling pathway by virus","type":"related"},{"name":"negative regulation by virus of host type I interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type I IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type I interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0039502"}


id: GO:0033095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded storage granule found in cells of the aleurone layer in plants; contains either a protein matrix, protein-carbohydrate bodies and/or globoids. Aleurone grains are formed by the vacuole, rough endoplasmic reticulum and dictyosomes.","definition_xrefs":["PMID:22452734","Wikipedia:Aleurone"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"aleurone grain","synonyms":[{"name":"aleurone body","type":"exact"}],"termid":"GO:0033095"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: GO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-sinapoylcholine + H2O = choline + H+ + sinapate.","definition_xrefs":["EC:3.1.1.49","RHEA:10016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sinapine esterase activity","secondary_identifiers":["KEGG_REACTION:R02381","MetaCyc:SINAPINE-ESTERASE-RXN"],"synonyms":[{"name":"aromatic choline esterase activity","type":"related"},{"name":"sinapoylcholine sinapohydrolase activity","type":"related"}],"termid":"GO:0050285"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: GO:0140351
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90059,93644],"is_not":false,"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of glycosylceramide from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. Glycosylceramides are ceramides containing a functional group derived from a sugar.","definition_xrefs":["PMID:30530492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"glycosylceramide flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactocerebroside flippase activity","type":"narrow"},{"name":"galactosylceramide flippase activity","type":"narrow"},{"name":"glucosylceramide flippase activity","type":"narrow"},{"name":"glycoceramide flippase activity","type":"exact"},{"name":"glycosylceramide flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140351","terms_by_termid":{"GO:0140351":null}}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: GO:0043531
data:
  {"annotated_genes":["SJAG_03660","SJAG_02564","SJAG_02785","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84627,84715,88459,99204],"is_not":false,"summary":null,"term":"GO:0043531"}]},"cv_name":"molecular_function","definition":"Binding to ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ADP binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-diphosphate binding","type":"exact"},{"name":"adenosine diphosphate binding","type":"exact"}],"termid":"GO:0043531","terms_by_termid":{"GO:0043531":null}}


id: PBO:0085383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; required for the export of a-factor, catalyzes ATP hydrolysis coupled to a-factor transport; contains 12 transmembrane domains and two ATP binding domains; expressed only in MATa cells; human homolog ABCB1 mediates multidrug resistance in many chemotherapy-resistant tumors by effluxing toxic compounds from the cell","termid":"PBO:0085383"}


id: GO:0016647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","secondary_identifiers":["EC:1.5.3.-"],"termid":"GO:0016647"}


id: PBO:0090302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase/6-phosphofructo-2-kinase family","termid":"PBO:0090302"}


id: PBO:0056536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 1","termid":"PBO:0056536"}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["PMID:15177031","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: GO:0097290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).","definition_xrefs":["UniPathway:UPA00061","GOC:yaf","MetaCyc:PWY-5508","MetaCyc:PWY-6269"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ribazole biosynthetic process (obsolete GO:0097290)","synonyms":[{"name":"alpha-ribazole anabolism","type":"exact"},{"name":"alpha-ribazole biosynthesis","type":"exact"},{"name":"alpha-ribazole formation","type":"exact"},{"name":"alpha-ribazole synthesis","type":"exact"}],"termid":"GO:0097290"}


id: PBO:0056729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm posterior bHLH transcription factor 2","termid":"PBO:0056729"}


id: PBO:0061998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 1 pseudogene","termid":"PBO:0061998"}


id: PBO:0030568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_glycine_level","termid":"PBO:0030568"}


id: PBO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 5","termid":"PBO:0052491"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: GO:0030411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scytalone = 1,3,8-trihydroxynaphthalene + H2O.","definition_xrefs":["EC:4.2.1.94","RHEA:24396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"scytalone dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02907","MetaCyc:SCYTALONE-DEHYDRATASE-RXN"],"synonyms":[{"name":"scytalone 7,8-hydro-lyase (1,3,8-trihydroxynaphthalene-forming)","type":"related"},{"name":"scytalone 7,8-hydro-lyase activity","type":"related"}],"termid":"GO:0030411"}


id: PBO:0084144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity histidine permease; also involved in the transport of manganese ions","termid":"PBO:0084144"}


id: GO:0071184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-a1, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-a1 complex","synonyms":[{"name":"Pcdhga1-Pcdha4 complex","type":"narrow"}],"termid":"GO:0071184"}


id: SO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array that corresponds to a silenced version of a mating type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_array","termid":"SO:0005854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mating_type_cassette_array","synonyms":[{"name":"silent mating-type cassette","type":"related"}],"termid":"SO:0001984"}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_03635","SJAG_01465","SJAG_03286","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82844],"is_not":false,"summary":null,"term":"GO:0032453"},{"annotations":[82845,92344,109079,108212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0032452","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822467","Reactome:R-HSA-9822461"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0032453":null,"GO:0034647":null}}


id: PBO:0081497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 395","termid":"PBO:0081497"}


id: PBO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_non-growing_cell_tip","termid":"PBO:0034683"}


id: PBO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11 (predicted)","termid":"PBO:0001187"}


id: GO:0009445
data:
  {"annotated_genes":["SJAG_00043","SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[82859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving putrescine, 1,4-diaminobutane; putrescine can be formed by decarboxylation of ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"putrescine metabolism","type":"exact"}],"termid":"GO:0009445","terms_by_termid":{"GO:0009447":null,"GO:0033387":null}}


id: GO:0047928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + gibberellin = UDP + gibberellin 2-O-beta-D-glucoside.","definition_xrefs":["MetaCyc:GIBBERELLIN-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"gibberellin beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:20025"],"synonyms":[{"name":"UDP-glucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"gibberellin b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-gibberellate 3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-gibberellate 7-glucosyltransferase activity","type":"related"}],"termid":"GO:0047928"}


id: PBO:0003329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-like I protein Txl1","termid":"PBO:0003329"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0034444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endosome_to_Golgi_transport","termid":"PBO:0034444"}


id: PBO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036212"}


id: PBO:0052183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK15 and WISP2 antisense RNA 1","termid":"PBO:0052183"}


id: GO:0052407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of carbohydrate in other organism involved in symbiotic interaction (obsolete GO:0052407)","synonyms":[{"name":"metabolism by organism of carbohydrate in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052407"}


id: PBO:0079729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 6 (pseudogene)","termid":"PBO:0079729"}


id: SO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription terminator that is not dependent upon Rho. Rather, the mRNA contains a sequence that allows it to base-pair with itself and make a stem-loop structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_terminator","termid":"SO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho_independent_bacterial_terminator","synonyms":[{"name":"rho independent bacterial terminator","type":"exact"}],"termid":"SO:0000982"}


id: FYPO:0003194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule stability during vegetative growth","type":"related"},{"name":"increased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"increased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"increased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"increased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0003194"}


id: FYPO:0003211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which secondary cell septum biogenesis is abnormal. Secondary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the secondary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"abnormal secondary cell septum biogenesis","synonyms":[{"name":"abnormal secondary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal secondary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal secondary cell septum formation","type":"related"},{"name":"abnormal secondary cell septum synthesis","type":"related"},{"name":"abnormal secondary septum biogenesis","type":"exact"}],"termid":"FYPO:0003211"}


id: GO:0015820
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_03970","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83557],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[94615,88941,87269],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of leucine, 2-amino-4-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"leucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine transport","type":"narrow"}],"termid":"GO:0015820","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: GO:0002887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"negatively_regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid leukocyte mediated immunity","synonyms":[{"name":"down regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"down-regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"downregulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"inhibition of myeloid leukocyte mediated immunity","type":"narrow"}],"termid":"GO:0002887"}


id: GO:0045661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast differentiation","termid":"GO:0045661"}


id: PBO:0067531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 675, pseudogene","termid":"PBO:0067531"}


id: PBO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 38","termid":"PBO:0080075"}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: GO:0004421
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93756],"is_not":false,"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + acetyl-CoA + H2O = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H+.","definition_xrefs":["RHEA:10188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.10","Reactome:R-HSA-73918","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN","Reactome:R-HSA-191323","KEGG_REACTION:R01978"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA-acetylating)","type":"related"},{"name":"(s)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA- acetylating) activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-coenzyme A synthase activity","type":"related"},{"name":"HMG-CoA synthase activity","type":"related"},{"name":"acetoacetyl coenzyme A transacetase activity","type":"related"},{"name":"acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-condensing enzyme","type":"related"},{"name":"hydroxymethylglutaryl coenzyme alpha-condensing enzyme activity","type":"related"}],"termid":"GO:0004421","terms_by_termid":{"GO:0004421":null}}


id: GO:0051997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H imidazole-5-carboxylate + H+ = S-allantoin + CO2.","definition_xrefs":["MetaCyc:RXN-6201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R06604","EC:4.1.1.97","RHEA:26301"],"synonyms":[{"name":"4-(carbamoylamino)-5-hydroxy-2-oxo-2,5-dihydro-1H-imidazole-5-carboxylate decarboxylase activity","type":"exact"},{"name":"OHCU decarboxylase activity","type":"exact"}],"termid":"GO:0051997"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: PBO:0076032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32A","termid":"PBO:0076032"}


id: PBO:0050132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 42","termid":"PBO:0050132"}


id: PBO:0044959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 1 (pseudogene)","termid":"PBO:0044959"}


id: GO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ovulation cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the fused antrum stage of oogenesis.","definition_xrefs":["GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in fused antrum stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during fused antrum stage","type":"related"}],"termid":"GO:0003003"}


id: GO:2000081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of canonical Wnt signaling pathway","termid":"GO:0090263"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation","termid":"GO:2000079"},{"relation_name":"positively_regulates","term_name":"canonical Wnt signaling pathway involved in regulation of type B pancreatic cell proliferation","termid":"GO:0044343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation","synonyms":[{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000081"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: PBO:0090809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase","termid":"PBO:0090809"}


id: PBO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 2","termid":"PBO:0043553"}


id: GO:0048008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a platelet-derived growth factor receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"PDGF receptor signaling pathway","type":"exact"},{"name":"PDGF receptor signalling pathway","type":"exact"},{"name":"PDGFR signaling pathway","type":"exact"}],"termid":"GO:0048008"}


id: GO:1900144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of BMP secretion","termid":"GO:2001284"},{"relation_name":"positively_regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of BMP secretion","synonyms":[{"name":"activation of BMP protein secretion","type":"narrow"},{"name":"activation of BMP secretion","type":"narrow"},{"name":"activation of bone morphogenetic protein secretion","type":"narrow"},{"name":"positive regulation of BMP protein secretion","type":"exact"},{"name":"positive regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"up regulation of BMP protein secretion","type":"exact"},{"name":"up regulation of BMP secretion","type":"exact"},{"name":"up regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"up-regulation of BMP protein secretion","type":"exact"},{"name":"up-regulation of BMP secretion","type":"exact"},{"name":"up-regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"upregulation of BMP protein secretion","type":"exact"},{"name":"upregulation of BMP secretion","type":"exact"},{"name":"upregulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:1900144"}


id: PBO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec27","termid":"PBO:0003326"}


id: PR:Q09668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L22-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.15","secondary_identifiers":["UniProtKB:Q09668"],"synonyms":[{"name":"Spom972h-RPL22L1","type":"exact"}],"termid":"PR:Q09668"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: PBO:0055898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 19","termid":"PBO:0055898"}


id: GO:0106107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-mevalonic acid biosynthetic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:24296663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"(R)-mevalonic acid biosynthetic process","termid":"GO:1901737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of (R)-mevalonic acid biosynthetic process","termid":"GO:0106107"}


id: GO:0102166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acetyl-alpha-D-glucosaminyl-L-threonine-[glycoprotein] = N-acetyl-alpha-D-glucosaminide + a [protein]-L-threonine.","definition_xrefs":["EC:3.2.1.169","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity","secondary_identifiers":["RHEA:48892","MetaCyc:RXN-11891"],"termid":"GO:0102166"}


id: GO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a malonyl group (CO-CH2-CO), from an amino acid residue within a protein or peptide.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demalonylation","termid":"GO:0036046"}


id: PBO:0040226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 2","termid":"PBO:0040226"}


id: PBO:0055834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 4","termid":"PBO:0055834"}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: GO:0008168
data:
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id: PBO:0063396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6 pseudogene 1","termid":"PBO:0063396"}


id: FYPO:0005467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring during mitosis","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring during mitosis","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitotic nuclear division","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis during mitosis","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring during mitosis","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring during mitosis","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring during mitosis","type":"exact"}],"termid":"FYPO:0005467"}


id: PBO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 3","termid":"PBO:0060373"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: GO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to transforming growth factor beta receptor and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor anchoring activity (obsolete GO:0042057)","synonyms":[{"name":"TGF-beta receptor anchoring activity","type":"exact"},{"name":"TGFbeta receptor anchoring activity","type":"exact"},{"name":"transforming growth factor beta receptor anchor activity","type":"exact"},{"name":"transforming growth factor beta receptor anchoring activity","type":"exact"}],"termid":"GO:0042057"}


id: SO:1000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000117 sequence_variant_affecting_polypeptide_function (obsolete SO:1000117)","synonyms":[{"name":"mutation affecting polypeptide function","type":"related"},{"name":"sequence variant affecting polypeptide function","type":"exact"}],"termid":"SO:1000117"}


id: GO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"is_a","term_name":"mucilage metabolic process involved in seed coat development","termid":"GO:0048359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process involved in seed coat development","synonyms":[{"name":"mucilage anabolism during seed coat development","type":"exact"},{"name":"mucilage biosynthetic process during seed coat development","type":"related"},{"name":"mucilage formation during seed coat development","type":"exact"},{"name":"mucilage synthesis during seed coat development","type":"exact"}],"termid":"GO:0048354"}


id: PBO:0084282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the Golgi; required for targeting of the Arf-like GTPase Arl3p to the Golgi; multicopy suppressor of ypt6 null mutation","termid":"PBO:0084282"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: PBO:0065977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap associating with DIL domain","termid":"PBO:0065977"}


id: PBO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-actinomyosin ring linker protein Sbg1","termid":"PBO:0036415"}


id: PBO:0060081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 28","termid":"PBO:0060081"}


id: PBO:0004721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit (predicted)","termid":"PBO:0004721"}


id: PBO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cka1","termid":"PBO:0001374"}


id: PBO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein Vac8 (predicted)","termid":"PBO:0003251"}


id: PBO:0087467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a replication-pausing checkpoint complex; Tof1p-Mrc1p-Csm3p acts at the stalled replication fork to promote sister chromatid cohesion after DNA damage, facilitating gap repair of damaged DNA; interacts with the MCM helicase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087467"}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: PBO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd3","termid":"PBO:0003736"}


id: PBO:0051900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 8","termid":"PBO:0051900"}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: FYPO:0003178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the organization and subsequent separation of sister chromatids during the second meiotic nuclear division is normal (i.e. indistinguishable from wild type) during meiosis.","definition_xrefs":["PomBase:mah","GO:0045144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid segregation","synonyms":[{"name":"normal chromosome disjunction at meiosis II","type":"exact"},{"name":"normal sister chromatid segregation during meiosis","type":"exact"}],"termid":"FYPO:0003178"}


id: PBO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 37","termid":"PBO:0050259"}


id: GO:1901257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"down regulation of M-CSF production","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of M-CSF production","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of M-CSF production","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of M-CSF production","type":"exact"},{"name":"inhibition of macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of M-CSF production","type":"exact"}],"termid":"GO:1901257"}


id: PBO:0026854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_central_core","termid":"PBO:0026854"}


id: PBO:0028471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cytochrome_absorption_spectrum","termid":"PBO:0028471"}


id: PR:Q10445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp41 gene.","definition_xrefs":["UniProtKB:Q10445","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.12c","synonyms":[{"name":"Spom972h-rhp41","type":"exact"}],"termid":"PR:Q10445"}


id: PBO:0053893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1177","termid":"PBO:0053893"}


id: GO:0032021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of five proteins, designated NELF-A, -B, -C, -D, and -E in human, that can physically associate with RNP polymerase II to induce transcriptional pausing.","definition_xrefs":["PMID:12612062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"NELF complex","synonyms":[{"name":"negative elongation factor complex","type":"exact"}],"termid":"GO:0032021"}


id: GO:0046541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin.","definition_xrefs":["GOC:curators","UBERON:0001836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"saliva secretion","secondary_identifiers":["Wikipedia:Salivation"],"synonyms":[{"name":"salivation","type":"exact"}],"termid":"GO:0046541"}


id: PATO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A thickness which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"thickness","termid":"PATO:0000915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased thickness","synonyms":[{"name":"low thickness","type":"exact"},{"name":"slender","type":"related"},{"name":"thin","type":"related"}],"termid":"PATO:0000592"}


id: GO:0019277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5512","MetaCyc:PWY-5514","MetaCyc:PWY-8013"],"synonyms":[{"name":"UDP-N-acetylgalactosamine anabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine biosynthesis","type":"exact"},{"name":"UDP-N-acetylgalactosamine formation","type":"exact"},{"name":"UDP-N-acetylgalactosamine synthesis","type":"exact"}],"termid":"GO:0019277"}


id: SO:1000021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from T to A.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_A_transversion","synonyms":[{"name":"T to A transversion","type":"exact"}],"termid":"SO:1000021"}


id: PBO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNPEP antisense RNA 1","termid":"PBO:0045313"}


id: PBO:0056962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR22 host gene","termid":"PBO:0056962"}


id: PBO:0052087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 3","termid":"PBO:0052087"}


id: GO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell tolerance induction","synonyms":[{"name":"regulation of NK cell tolerance induction","type":"exact"}],"termid":"GO:0002871"}


id: PBO:0061196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NNT antisense RNA 1","termid":"PBO:0061196"}


id: PBO:0063741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 6","termid":"PBO:0063741"}


id: PBO:0028671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Sad1_foci_during_response_to_DNA_damage","termid":"PBO:0028671"}


id: PBO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030925"}


id: PBO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: PBO:0040972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 43","termid":"PBO:0040972"}


id: PBO:0072809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 4B","termid":"PBO:0072809"}


id: PBO:0035986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035986"}


id: FYPO:0001139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal leucine import","synonyms":[{"name":"abnormal L-leucine import","type":"exact"},{"name":"abnormal L-leucine import across plasma membrane","type":"exact"},{"name":"abnormal leucine import during mitotic cell cycle","type":"related"},{"name":"abnormal leucine import during vegetative growth","type":"exact"},{"name":"abnormal leucine import into cell","type":"exact"},{"name":"abnormal leucine uptake","type":"exact"}],"termid":"FYPO:0001139"}


id: PBO:0018170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent DNA helicase Rhp26","termid":"PBO:0018170"}


id: PR:O74761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA primase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10537:SF0","PRO:DNx","OMA:SCHPO03657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.06","secondary_identifiers":["UniProtKB:O74761"],"synonyms":[{"name":"Spom972h-PRIM2","type":"exact"}],"termid":"PR:O74761"}


id: GO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 2 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to extracellular organisms such as helminths, enhanced production of particular antibody isotypes, and pathological conditions such as allergy.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell lineage commitment","synonyms":[{"name":"T-helper 2 cell fate commitment","type":"exact"},{"name":"Th2 fate commitment","type":"exact"}],"termid":"GO:0002297"}


id: GO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H3 in which the lysine residue at position 9 has been modified by trimethylation.","definition_xrefs":["PMID:30110338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"H3K9me3 modified histone binding","termid":"GO:0062072"}


id: GO:0036086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.","definition_xrefs":["GOC:cjk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (obsolete GO:0036086)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to iron deficiency","type":"exact"}],"termid":"GO:0036086"}


id: PBO:0038654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 4","termid":"PBO:0038654"}


id: PBO:0063520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphatase","termid":"PBO:0063520"}


id: PBO:0029831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell","termid":"PBO:0029831"}


id: GO:0006033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which chitin is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chitin localization","synonyms":[{"name":"chitin localisation","type":"exact"},{"name":"establishment and maintenance of chitin localization","type":"exact"}],"termid":"GO:0006033"}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["UniProtKB:Q92359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: PBO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 21 pseudogene","termid":"PBO:0062089"}


id: PR:O42958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc2 gene.","definition_xrefs":["UniProtKB:O42958","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2-associated protein pat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.10c","synonyms":[{"name":"Spom972h-pdc2","type":"exact"},{"name":"decapping activator and translational repressor pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"topoisomerase II-associated protein pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42958"}


id: GO:0009499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monocluster bacterial-type ferredoxin (obsolete GO:0009499)","synonyms":[{"name":"monocluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009499"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: PBO:0091388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rrg9","termid":"PBO:0091388"}


id: PBO:0053360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-3, pseudogene","termid":"PBO:0053360"}


id: GO:0021841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons toward the signal, where this process is involved in migration from the subpallium to the cortex.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"positive chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021841"}


id: PBO:0067403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 510, pseudogene","termid":"PBO:0067403"}


id: PBO:0082271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase; tetrameric enzyme that catalyzes the deamination of AMP to form IMP and ammonia; thought to be involved in regulation of intracellular purine (adenine, guanine, and inosine) nucleotide pools","termid":"PBO:0082271"}


id: PBO:0079794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A2","termid":"PBO:0079794"}


id: GO:0000266
data:
  {"annotated_genes":["SJAG_01212","SJAG_03464","SJAG_05261","SJAG_04732","SJAG_01594","SJAG_02384","SJAG_02848","SJAG_01458","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66604,90620,95000,95700],"is_not":false,"summary":null,"term":"GO:0000266"},{"annotations":[98295,90621,98564],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090149"},{"annotations":[99293,112389],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090258"},{"annotations":[104797],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["PMID:11038192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_01458":null,"SJAG_01594":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_04203":null,"SJAG_04732":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial fission","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial division","type":"exact"},{"name":"mitochondrial proliferation","type":"related"}],"termid":"GO:0000266","terms_by_termid":{"GO:0000266":null,"GO:0090141":null,"GO:0090149":null,"GO:0090258":null}}


id: GO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line over time, from its formation to the mature structure. The posterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body and trunk of all fishes and most amphibians. The posterior lateral line develops from cranial ectodermal placodes situated behind the ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line development","termid":"GO:0048882"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line development","synonyms":[{"name":"PLL development","type":"exact"}],"termid":"GO:0048916"}


id: PR:Q10414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CWF19-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00248","PANTHER:PTHR12072:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19-like protein mug161 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.09","secondary_identifiers":["UniProtKB:Q10414"],"synonyms":[{"name":"Spom972h-CWF19L1","type":"exact"},{"name":"meiotically up-regulated gene 161 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10414"}


id: PBO:0045363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 3","termid":"PBO:0045363"}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: GO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary artery morphogenesis","termid":"GO:0060982"}


id: PATO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000968 albino value (obsolete PATO:0000968)","termid":"PATO:0000968"}


id: SO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The R segment of the long terminal repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_LTR_region","synonyms":[{"name":"R LTR region","type":"exact"},{"name":"R long terminal repeat region","type":"exact"}],"termid":"SO:0000423"}


id: PBO:0069529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 798, pseudogene","termid":"PBO:0069529"}


id: PBO:0027562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0027562"}


id: FYPO:0005230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to ultraviolet light is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26493332","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of translation in response to UV","synonyms":[{"name":"normal regulation of translation in response to UV during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to UV during vegetative growth","type":"exact"},{"name":"normal regulation of translation in response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005230"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: FYPO:0000928
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115447,115448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115430,115419,115418,115426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000928","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0043562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 1 chain","termid":"PBO:0043562"}


id: FYPO:0003020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein autophosphorylation during vegetative growth","synonyms":[{"name":"abolished protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"protein autophosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003020"}


id: PBO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Cia1","termid":"PBO:0090109"}


id: GO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxycytidine metabolic process","synonyms":[{"name":"deoxycytidine metabolism","type":"exact"}],"termid":"GO:0046092"}


id: GO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart trabecula formation","synonyms":[{"name":"cardiac trabecula formation","type":"exact"},{"name":"cardiac trabeculation","type":"exact"},{"name":"heart trabecula biogenesis","type":"related"},{"name":"heart trabeculation","type":"exact"}],"termid":"GO:0060347"}


id: GO:0019976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-2 binding","synonyms":[{"name":"IL-2 binding","type":"exact"}],"termid":"GO:0019976"}


id: GO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = cis-2,3-dehydroacyl-CoA + NADPH.","definition_xrefs":["MetaCyc:CIS-2-ENOYL-COA-REDUCTASE-NADPH-RXN","EC:1.3.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cis-2-enoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"NADPH-dependent cis-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ cis-2-oxidoreductase activity","type":"related"},{"name":"cis-2-enoyl-coenzyme A reductase activity","type":"related"},{"name":"reductase, cis-2-enoyl coenzyme A","type":"related"}],"termid":"GO:0047774"}


id: GO:0097020
data:
  {"annotated_genes":["SJAG_00785","SJAG_02120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111677,114890],"is_not":false,"summary":null,"term":"GO:0097020"}]},"cv_name":"molecular_function","definition":"Binding specifically to a substance (cargo) to deliver it to a COPII transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles.","definition_xrefs":["PMID:20236934","PMID:16957051","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00785":null,"SJAG_02120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"COPII receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097020","terms_by_termid":{"GO:0097020":null}}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: GO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to one or more amino acids in a protein, occurring after the protein has been completely translated and released from the ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-translational protein acetylation","synonyms":[{"name":"post-translational protein amino acid acetylation","type":"exact"},{"name":"posttranslational protein amino acid acetylation","type":"exact"}],"termid":"GO:0034421"}


id: PBO:0091747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Sul1","termid":"PBO:0091747"}


id: GO:1905415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["PMID:18468511","GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"positively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of dense core granule exocytosis","synonyms":[{"name":"activation of dense core granule exocytosis","type":"narrow"},{"name":"activation of dense core vesicle exocytosis","type":"narrow"},{"name":"positive regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up regulation of dense core granule exocytosis","type":"exact"},{"name":"up regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up-regulation of dense core granule exocytosis","type":"exact"},{"name":"up-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"upregulation of dense core granule exocytosis","type":"exact"},{"name":"upregulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905415"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["PubMed:3838747","PubMed:3208761","PubMed:8876649","RESID:AA0132","ChEBI:15618","PubMed:14588022","Unimod:388#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: PBO:0005387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase (predicted)","termid":"PBO:0005387"}


id: GO:0006922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of lamins during apoptosis, leading to the irreversible breakdown of the nuclear lamina.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0815332181","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of lamin involved in execution phase of apoptosis (obsolete GO:0006922)","synonyms":[{"name":"cleavage of lamin","type":"broad"},{"name":"cleavage of lamin involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006922"}


id: GO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a temperature stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception of pain","synonyms":[{"name":"perception of pain, detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"sensory perception of pain, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception of pain, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"thermal nociception","type":"related"}],"termid":"GO:0050965"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: GO:0090115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule that contributes to chromatin silencing.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation on cytosine involved in chromatin silencing (obsolete GO:0090115)","termid":"GO:0090115"}


id: PBO:0060193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 13, cell surface associated","termid":"PBO:0060193"}


id: PBO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho2","termid":"PBO:0048215"}


id: PBO:0036179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_at_Ser/Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036179"}


id: PBO:0065581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 2 beta","termid":"PBO:0065581"}


id: PBO:0054898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2312","termid":"PBO:0054898"}


id: PBO:0011474
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (mM min-1 ml-2)","termid":"PBO:0011474"}


id: PBO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Acr1","termid":"PBO:0090504"}


id: PBO:0049483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.7 linker histone","termid":"PBO:0049483"}


id: PATO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000338 compatability value (obsolete PATO:0000338)","termid":"PATO:0000338"}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: PBO:0074118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 4","termid":"PBO:0074118"}


id: FYPO:0000672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell morphology","synonyms":[{"name":"cellular morphology: normal","type":"related"}],"termid":"FYPO:0000672"}


id: PBO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 99","termid":"PBO:0071097"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12172:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: PBO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase","termid":"PBO:0001308"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GOC:TermGenie","GOC:rjd","PMID:24587195","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: GO:0031729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR4 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CCR4 chemokine receptor binding","synonyms":[{"name":"CCR4 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031729"}


id: FYPO:0003961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"abnormal PDAT activity","type":"exact"}],"termid":"FYPO:0003961"}


id: PBO:0042321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 ligand","termid":"PBO:0042321"}


id: PBO:0076277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 1","termid":"PBO:0076277"}


id: FYPO:0006436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"abnormal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abnormal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006436"}


id: PBO:0027593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027593"}


id: GO:2001162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K79 methylation (obsolete GO:2001162)","synonyms":[{"name":"positive regulation of histone H3 K79 methylation","type":"exact"},{"name":"positive regulation of histone H3K79me","type":"exact"},{"name":"positive regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001162"}


id: GO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 NAD+ + UDP-alpha-D-glucose = 3 H+ + 2 NADH + UDP-alpha-D-glucuronate.","definition_xrefs":["EC:1.1.1.22","RHEA:23596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose 6-dehydrogenase activity","secondary_identifiers":["MetaCyc:UGD-RXN","KEGG_REACTION:R00286","Reactome:R-HSA-173597"],"termid":"GO:0003979"}


id: PBO:0108712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGEF, implicated in endosomal transport","termid":"PBO:0108712"}


id: PBO:0065245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 16","termid":"PBO:0065245"}


id: FYECO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which beta-estradiol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ beta-estradiol","termid":"FYECO:0000218"}


id: PBO:0067337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 430, pseudogene","termid":"PBO:0067337"}


id: GO:0045283
data:
  {"annotated_genes":["SJAG_02398","SJAG_00260","SJAG_01671","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84302,109215,84680,112849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:IPR003510; InterPro:IPR004224) and D (InterPro:IPR003418) link the catalytic centers to the electron-transport chain. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)).","definition_xrefs":["InterPro:IPR003418","InterPro:IPR004224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"respiratory chain complex II","termid":"GO:0045273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fumarate reductase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045283","terms_by_termid":{"GO:0005749":null}}


id: FYPO:0002380
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115461,115466,115472,115498],"is_not":false,"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":4,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable spheroid vegetative cell","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_03453","SJAG_00514","SJAG_02819"],"single_locus_genotype_uniquenames":["scd2delta","efc25delta","ras1delta","scd1delta"],"synonyms":[{"name":"viable spheroid cell during vegetative growth","type":"exact"},{"name":"spheroid viable cell","type":"exact"},{"name":"viable round vegetative cell","type":"related"},{"name":"viable rounded vegetative cell","type":"exact"},{"name":"viable spheroid cell","type":"exact"},{"name":"viable spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002380","terms_by_termid":{"FYECO:0000137":null,"FYPO:0002380":null}}


id: GO:0070965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"activation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"upregulation of neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070965"}


id: GO:1900146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:signaling","GOC:vk","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900146)","synonyms":[{"name":"down regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"down-regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900146"}


id: PBO:0054453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1850","termid":"PBO:0054453"}


id: PBO:0083514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C","termid":"PBO:0083514"}


id: PBO:0039178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 8 pseudogene 1","termid":"PBO:0039178"}


id: GO:0008062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The timing of the emergence of the adult fly from its pupal case, which usually occurs at dawn.","definition_xrefs":["PMID:11715043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eclosion rhythm","termid":"GO:0008062"}


id: PBO:0089249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Taz1","termid":"PBO:0089249"}


id: GO:0022624
data:
  {"annotated_genes":["SJAG_01652","SJAG_02900","SJAG_04477","SJAG_01203","SJAG_04088","SJAG_01131","SJAG_04144","SJAG_00738","SJAG_00712","SJAG_03638","SJAG_01544","SJAG_01489","SJAG_04572","SJAG_01617","SJAG_04211","SJAG_03408","SJAG_04484","SJAG_03733","SJAG_00762","SJAG_03321","SJAG_02992","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109057,106177],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005838"},{"annotations":[101177,111248,106178,102955,100422,94686,92440,109058,99906,113506],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[105235,92082,100189,107180,88606,111216,111328,94687,89783,84343,92792,97435,94534,97892],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A protein complex, that caps one or both ends of the proteasome core complex and regulates entry into, or exit from, the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01617":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03733":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome accessory complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022624","terms_by_termid":{"GO:0005838":null,"GO:0008540":null,"GO:0008541":null}}


id: PATO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficiency","synonyms":[{"name":"high efficiency","type":"exact"}],"termid":"PATO:0001676"}


id: PBO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 (predicted)","termid":"PBO:0012547"}


id: GO:0106323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + NADPH+= + H+ + O2 = NADP+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-limonene 1,2-monooxygenase activity","termid":"GO:0052601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-limonene 1,2-monooxygenase NADPH activity","termid":"GO:0106323"}


id: PBO:0091874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter","termid":"PBO:0091874"}


id: GO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the concentration of calcium ions in the cytosol after fertilization or the physiological activation of an egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","synonyms":[{"name":"elevation of cytosolic calcium ion concentration involved in egg activation","type":"exact"}],"termid":"GO:0060470"}


id: PBO:0017615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Saf5","termid":"PBO:0017615"}


id: PBO:0053942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1243","termid":"PBO:0053942"}


id: FYPO:0004942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains galactose and mannose residues in a normal (i.e. indistinguishable from wild type) ratio. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:11015724","PMID:8782411","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal galactose:mannose ratio in glycoprotein glycan","synonyms":[{"name":"normal galactose:mannose ratio in glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0004942"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["GO:0061817","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: PBO:0083005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific protein; may regulate cross-talk between the mating and filamentation pathways; deletion affects cell separation after division and sensitivity to alpha-factor and drugs affecting the cell wall; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083005"}


id: FYPO:0001961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA topoisomerase II activity","termid":"FYPO:0001960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA topoisomerase II activity","synonyms":[{"name":"decreased DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"},{"name":"reduced DNA topoisomerase II activity","type":"exact"}],"termid":"FYPO:0001961"}


id: GO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of alpha-amylase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"alpha-amylase inhibitor activity","termid":"GO:0015066"}


id: MOD:01499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01499"}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: PATO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of rate","synonyms":[{"name":"high variability of rate","type":"exact"}],"termid":"PATO:0001587"}


id: PBO:0029630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_chromosomes","termid":"PBO:0029630"}


id: GO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland cord morphogenesis","synonyms":[{"name":"epithelial cell differentiation involved in mammary gland sprout morphogenesis","type":"related"}],"termid":"GO:0060653"}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:cjm","GOC:mtg_berkeley_2012_08_27","GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: PBO:0042214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2","termid":"PBO:0042214"}


id: PBO:0014307
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GlycosylPhosphatidylInositol","termid":"PBO:0014307"}


id: PBO:0070901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 9","termid":"PBO:0070901"}


id: PBO:0039494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A17, pseudogene","termid":"PBO:0039494"}


id: PBO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoneurin","termid":"PBO:0060320"}


id: PBO:0083861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl-diphosphate farnesyl transferase (squalene synthase); joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway","termid":"PBO:0083861"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jsg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine","termid":"GO:0044526"}


id: GO:0018687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl + NADH + H+ + O2 = (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+. This reaction requires Fe2+.","definition_xrefs":["EC:1.14.12.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biphenyl 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0089","RHEA:18165","MetaCyc:1.14.12.18-RXN"],"synonyms":[{"name":"biphenyl dioxygenase activity","type":"related"},{"name":"biphenyl,NADH:oxygen oxidoreductase (2,3-hydroxylating)","type":"related"}],"termid":"GO:0018687"}


id: FYPO:0006996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell normal (i.e. indistinguishable from wild type). Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["SO:0000644","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal antisense RNA level","synonyms":[{"name":"normal antisense RNA accumulation","type":"related"},{"name":"normal antisense RNA level during mitotic cell cycle","type":"related"},{"name":"normal antisense RNA level during vegetative growth","type":"exact"},{"name":"normal antisense RNA transcript level","type":"exact"},{"name":"normal level of antisense transcripts","type":"exact"}],"termid":"FYPO:0006996"}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: FYPO:0000391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal passage through START of mitotic cell cycle","synonyms":[{"name":"cell cycle passage through START: normal","type":"related"},{"name":"normal mitotic cell cycle passage through START","type":"exact"},{"name":"normal passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000391"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: PBO:0013830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16 (predicted)","termid":"PBO:0013830"}


id: GO:0009168
data:
  {"annotated_genes":["SJAG_03355","SJAG_04681","SJAG_02364","SJAG_01661","SJAG_01859","SJAG_00964","SJAG_04634","SJAG_04123","SJAG_02850","SJAG_06634","SJAG_01070","SJAG_03140","SJAG_01298","SJAG_01081","SJAG_00044","SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99239,84363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106185,93518,113438,99240,115065,110562,95301,106298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[89159,112934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59161,96971,104182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[115066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89385,97598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[89387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside monophosphate formation","type":"exact"},{"name":"purine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009168","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: GO:0021745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nucleus ambiguus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:curators","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus ambiguus development","termid":"GO:0021745"}


id: PBO:0083178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the characterized snoRNA gene snR73","termid":"PBO:0083178"}


id: PBO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.99.7","termid":"PBO:0003379"}


id: PBO:0027578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposon-derived_cDNA_recombination","termid":"PBO:0027578"}


id: _global:is_unit_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_unit_of","termid":"_global:is_unit_of"}


id: GO:0047469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxymethyl-4-methylbut-2-en-1,4-olide = 4-carboxymethyl-3-methylbut-2-en-1,4-olide.","definition_xrefs":["RHEA:19237","EC:5.4.99.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"4-carboxymethyl-4-methylbutenolide mutase activity","secondary_identifiers":["MetaCyc:5.4.99.14-RXN","KEGG_REACTION:R04510"],"synonyms":[{"name":"4-carboxymethyl-4-methylbut-2-en-1,4-olide methylmutase activity","type":"related"},{"name":"4-methyl-2-enelactone isomerase activity","type":"related"},{"name":"4-methyl-2-enelactone methyl-isomerase activity","type":"related"},{"name":"4-methyl-3-enelactone methyl isomerase activity","type":"related"},{"name":"4-methylmuconolactone methylisomerase activity","type":"related"}],"termid":"GO:0047469"}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: PBO:0003882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20 (predicted)","termid":"PBO:0003882"}


id: GO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-fructose 6-phosphate = UDP + sucrose 6-phosphate.","definition_xrefs":["EC:2.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sucrose-phosphate synthase activity","secondary_identifiers":["MetaCyc:SUCROSE-PHOSPHATE-SYNTHASE-RXN","RHEA:22172"],"synonyms":[{"name":"SPS","type":"related"},{"name":"UDP-glucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"sucrose 6-phosphate synthase activity","type":"related"},{"name":"sucrose phosphate synthetase activity","type":"related"},{"name":"sucrose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"sucrosephosphate-UDP glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-fructose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0046524"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: PBO:0015234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in sporulation Dbl4","termid":"PBO:0015234"}


id: GO:0002749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Antigen processing and presentation which is initiated by phagocytosis of antigen bound directly or indirectly to a cell surface toll-like receptor (TLR).","definition_xrefs":["PMID:15596122","GOC:add","ISBN:0781735149"],"gene_count":0,"genotype_count":0,"name":"obsolete antigen processing and presentation initiated by toll-like receptor mediated phagocytosis of antigen (obsolete GO:0002749)","synonyms":[{"name":"antigen processing and presentation initiated by TLR mediated phagocytosis of antigen","type":"exact"}],"termid":"GO:0002749"}


id: GO:0018617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzenesulfonate + 2 H+ + O2 + 2 e- = NH3 + 4-sulfocatechol.","definition_xrefs":["UM-BBD_reactionID:r0580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-aminobenzenesulfonate 3,4-dioxygenase (deaminating) activity","secondary_identifiers":["EC:1.14.12.-"],"synonyms":[{"name":"4-aminobenzenesulphonate 3,4-dioxygenase (deaminating) activity","type":"exact"}],"termid":"GO:0018617"}


id: FYPO:0007904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal glucan synthesis","synonyms":[{"name":"abnormal glucan biosynthetic process","type":"exact"},{"name":"beta-glucan synthesis defective","type":"exact"}],"termid":"FYPO:0007904"}


id: GO:0047109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (S)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.280","RHEA:18269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.56-RXN","KEGG_REACTION:R04106"],"synonyms":[{"name":"(S)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (S)-reductase activity","type":"related"},{"name":"ethyl-(S)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047109"}


id: PBO:0055276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2703","termid":"PBO:0055276"}


id: GO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"positively_regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonoid biosynthetic process","synonyms":[{"name":"activation of flavonoid biosynthetic process","type":"narrow"},{"name":"positive regulation of flavonoid anabolism","type":"exact"},{"name":"positive regulation of flavonoid biosynthesis","type":"exact"},{"name":"positive regulation of flavonoid formation","type":"exact"},{"name":"positive regulation of flavonoid synthesis","type":"exact"},{"name":"stimulation of flavonoid biosynthetic process","type":"narrow"},{"name":"up regulation of flavonoid biosynthetic process","type":"exact"},{"name":"up-regulation of flavonoid biosynthetic process","type":"exact"},{"name":"upregulation of flavonoid biosynthetic process","type":"exact"}],"termid":"GO:0009963"}


id: PBO:0041449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 153","termid":"PBO:0041449"}


id: FYPO:0005340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H4 is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24478943","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4 deacetylation during cellular response to hydroxyurea","synonyms":[{"name":"normal histone H4 deacetylation during cellular response to HU","type":"exact"},{"name":"normal histone H4 deacetylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal histone H4 deacetylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005340"}


id: GO:0032767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex, in the presence of copper.","definition_xrefs":["GOC:ecd","PMID:16884690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"copper-dependent protein binding","termid":"GO:0032767"}


id: PBO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease Uve1","termid":"PBO:0004230"}


id: PBO:0080636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83 opposite strand","termid":"PBO:0080636"}


id: PBO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 83","termid":"PBO:0071242"}


id: PBO:0087950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in biogenesis of the 60S ribosomal subunit","termid":"PBO:0087950"}


id: PBO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 24","termid":"PBO:0070351"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: PATO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000166 absolute time (obsolete PATO:0000166)","termid":"PATO:0000166"}


id: SO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A bacterial promoter with sigma ecf factor binding dependency. This is a type of bacterial promoters that requires a sigma ECF factor to bind to identified -10 and -35 sequence regions in order to mediate binding of the RNA polymerase to the promoter region as part of transcription initiation.","definition_xrefs":["Invitrogen:kc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_ecf_element","synonyms":[{"name":"bacterial RNApol promoter sigma ecf ","type":"exact"}],"termid":"SO:0001913"}


id: PBO:0064190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XV","termid":"PBO:0064190"}


id: PBO:0056828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase 2 (putative)","termid":"PBO:0056828"}


id: GO:1905427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction that is involved in positive regulation of cell growth.","definition_xrefs":["GOC:TermGenie","GOC:vw","GOC:al","GO_REF:0000060","PMID:15917811"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in positive regulation of cell growth (obsolete GO:1905427)","synonyms":[{"name":"intracellular protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signal transduction pathway involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"intracellular signaling chain involved in activation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in positive regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signaling pathway involved in activation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in upregulation of cell growth","type":"related"},{"name":"protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"signal transduction via intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"signal transmission via intracellular cascade involved in activation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in stimulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in upregulation of cell growth","type":"narrow"}],"termid":"GO:1905427"}


id: GO:1902218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:14569084","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"}


id: FYPO:0002732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains a single nucleus, and more DNA than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mononucleate cell with increased DNA content during stationary phase","termid":"FYPO:0002732"}


id: PBO:0062440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 104 pseudogene","termid":"PBO:0062440"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: FYPO:0003006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to caffeine","synonyms":[{"name":"decreased protein phosphorylation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003006"}


id: PBO:0078777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 3-1","termid":"PBO:0078777"}


id: GO:0001510
data:
  {"annotated_genes":["SJAG_01261","SJAG_02302","SJAG_03901","SJAG_02350","SJAG_00744","SJAG_02386","SJAG_01269","SJAG_02024","SJAG_02099","SJAG_04453","SJAG_05249","SJAG_00943","SJAG_04181","SJAG_01375","SJAG_04993","SJAG_01958","SJAG_00886","SJAG_03410","SJAG_04735","SJAG_04848","SJAG_02281","SJAG_03773","SJAG_02352","SJAG_04736","SJAG_04034","SJAG_02377","SJAG_02637","SJAG_04367","SJAG_00255","SJAG_03367","SJAG_03008","SJAG_03289","SJAG_03016","SJAG_02042","SJAG_01314","SJAG_04680","SJAG_03713","SJAG_00325","SJAG_04890","SJAG_03332","SJAG_02417","SJAG_03877","SJAG_00722","SJAG_00499","SJAG_05334","SJAG_04649","SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[97158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[90552,91897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[90849,109648,112288,86847,91290,93789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[63536,94594,64175,65618,105015,85127,59370,94136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[104006,94522,106140,107308,89754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[58413,111781,115072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[106099,102646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[101646,85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[86468,93782,90342,98691,110881,96745,91898,89555,101796,93790,88408,108128,85970,104390,114053,109649,84058,93560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[97159,95150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[103154,99971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[110882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[83736,89556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[93561,98692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.","definition_xrefs":["PMID:21823225","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02637":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA methylation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0001510","terms_by_termid":{"GO:0000452":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0031167":null,"GO:0036261":null,"GO:0070475":null,"GO:0070476":null,"GO:0070901":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null}}


id: PBO:0025478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schindler disease","termid":"PBO:0025478"}


id: GO:0031430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines.","definition_xrefs":["GOC:mtg_muscle","ISBN:0198506732","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"M band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"M disc","type":"exact"},{"name":"M line","type":"narrow"},{"name":"mesophragma","type":"exact"},{"name":"midline","type":"broad"}],"termid":"GO:0031430"}


id: PBO:0071055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 57","termid":"PBO:0071055"}


id: PBO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN1 antisense RNA 1","termid":"PBO:0060824"}


id: GO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone mediated signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"thyroid hormone mediated signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of thyroid hormone mediated signaling pathway","synonyms":[{"name":"positive regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002157"}


id: PBO:0055601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3037","termid":"PBO:0055601"}


id: PBO:0073655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 2","termid":"PBO:0073655"}


id: GO:0019729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP583 chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0189"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine (obsolete GO:0019729)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0019729"}


id: GO:0030375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of a transcription cofactor that activates transcription in conjunction with a thyroid hormone-dependent nuclear receptor from a RNA polymerase II promoter; does not bind DNA itself.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete thyroid hormone receptor coactivator activity (obsolete GO:0030375)","synonyms":[{"name":"thyroid hormone receptor activator activity","type":"narrow"},{"name":"thyroid hormone receptor co-activator activity","type":"exact"}],"termid":"GO:0030375"}


id: GO:1902637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell differentiation that is involved in thymus development.","definition_xrefs":["GO_REF:0000060","GOC:nhn","PMID:15741317","GOC:TermGenie","PMID:18292542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell differentiation involved in thymus development","termid":"GO:1902637"}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: GO:0160003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon mono-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:34023495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"mono-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160003"}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: GO:0103037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP = H+ + L-glyceraldehyde 3-phosphate + NADPH.","definition_xrefs":["PMID:18620424","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-glyceraldehyde 3-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN0-5410"],"termid":"GO:0103037"}


id: GO:0031171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["GOC:mah","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"},{"relation_name":"is_a","term_name":"ferricrocin metabolic process","termid":"GO:0031170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferricrocin biosynthetic process","secondary_identifiers":["GO:0031186","GO:0031185"],"synonyms":[{"name":"ferricrocin anabolism","type":"exact"},{"name":"ferricrocin biosynthesis","type":"exact"},{"name":"ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"ferricrocin formation","type":"exact"},{"name":"ferricrocin synthesis","type":"exact"}],"termid":"GO:0031171"}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: GO:0006369
data:
  {"annotated_genes":["SJAG_04942","SJAG_03689","SJAG_02156","SJAG_04527","SJAG_03624","SJAG_03179","SJAG_04006","SJAG_01713","SJAG_03126","SJAG_03923","SJAG_02242","SJAG_02037"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72850,88437,92889,93854,95623,103595,103692,112066],"is_not":false,"summary":null,"term":"GO:0006369"},{"annotations":[107939],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[92954,97964,103349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript.","definition_xrefs":["PMID:27371117","GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_02037":null,"SJAG_02156":null,"SJAG_02242":null,"SJAG_03126":null,"SJAG_03179":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03923":null,"SJAG_04006":null,"SJAG_04527":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019224"],"synonyms":[{"name":"RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"RNA polymerase II transcription termination","type":"exact"},{"name":"RNA polymerase II transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol II promoter","type":"exact"},{"name":"transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006369","terms_by_termid":{"GO:0006369":null,"GO:0030847":null,"GO:1904595":null}}


id: GO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.","definition_xrefs":["GOC:elh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA catabolic process, exonucleolytic (obsolete GO:0000738)","synonyms":[{"name":"DNA breakdown, exonucleolytic","type":"exact"},{"name":"DNA degradation, exonucleolytic","type":"exact"},{"name":"exonucleolytic degradation of DNA","type":"exact"}],"termid":"GO:0000738"}


id: PBO:0042444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42EP3 antisense RNA 1","termid":"PBO:0042444"}


id: PBO:0091665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0091665"}


id: PBO:0082035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase; catalyzes the acylation of lysophosphatidic acid to form phosphatidic acid, a key intermediate in lipid metabolism; enzymatic activity detected in lipid particles and microsomes","termid":"PBO:0082035"}


id: PBO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 3","termid":"PBO:0045588"}


id: PBO:0025466
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mrc1 associates with origins later than MCM complex, but slightly earlier than Cdc45","termid":"PBO:0025466"}


id: FYECO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleic acid","termid":"FYECO:0000049"}


id: PBO:0062780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 2 pseudogene","termid":"PBO:0062780"}


id: GO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is not coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase type II (ATP-independent) activity (obsolete GO:0061506)","termid":"GO:0061506"}


id: PBO:0089301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH/NADPH-dependent indole-3-acetaldehyde reductase, implicated in cellular detoxification","termid":"PBO:0089301"}


id: GO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"positively_regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response","synonyms":[{"name":"stimulation of immune response","type":"narrow"},{"name":"up regulation of immune response","type":"exact"},{"name":"up-regulation of immune response","type":"exact"},{"name":"upregulation of immune response","type":"exact"}],"termid":"GO:0050778"}


id: GO:2000503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of natural killer cell chemotaxis","termid":"GO:2000501"},{"relation_name":"positively_regulates","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell chemotaxis","termid":"GO:2000503"}


id: PATO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000747 coordination value (obsolete PATO:0000747)","termid":"PATO:0000747"}


id: PBO:0044152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 1","termid":"PBO:0044152"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: GO:0140738
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of NLRP6, PYCARD/ASC and caspase-1 or caspase-4/caspase-11.","definition_xrefs":["PMID:34678144","PMID:30674671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"NLRP6 inflammasome complex","termid":"GO:0140738"}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: GO:2001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xanthone-containing compound.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthone-containing compound metabolic process","synonyms":[{"name":"xanthone metabolism","type":"narrow"},{"name":"xanthone-containing compound metabolism","type":"exact"},{"name":"xanthones metabolic process","type":"exact"},{"name":"xanthones metabolism","type":"exact"}],"termid":"GO:2001305"}


id: GO:1990936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a vascular smooth muscle cell (a non-striated, elongated, spindle-shaped cell found lining the blood vessels) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:19088079","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation involved in phenotypic switching","termid":"GO:0090678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1990936"}


id: GO:0019888
data:
  {"annotated_genes":["SJAG_04627","SJAG_04999","SJAG_03940","SJAG_04968","SJAG_03272","SJAG_04871","SJAG_00229","SJAG_04638","SJAG_03309","SJAG_00078","SJAG_00534","SJAG_03681","SJAG_01901","SJAG_03353","SJAG_03793","SJAG_00095","SJAG_02380","SJAG_01270","SJAG_00369","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88531,88582,92006,93410,97055,108743],"is_not":false,"summary":null,"term":"GO:0019888"},{"annotations":[114666,84211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[111983,114033,93409,95322,88530,102458,111040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[84885,85797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[83318,107339,95177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[93573,85474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"protein phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030362","Reactome:R-HSA-180038","GO:0008601","GO:0008599","GO:0030359"],"synonyms":[{"name":"calcineurin regulator activity","type":"narrow"},{"name":"calcineurin, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase 2 regulator activity","type":"narrow"},{"name":"protein phosphatase 2, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase 3 regulator activity","type":"narrow"},{"name":"protein phosphatase 3, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 1 regulator activity","type":"narrow"},{"name":"protein phosphatase type 1, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 2A regulator activity","type":"narrow"},{"name":"protein phosphatase type 2A, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 2B regulator activity","type":"narrow"},{"name":"protein phosphatase type 2B, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 4 regulator activity","type":"narrow"},{"name":"protein phosphatase type 4, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019888","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019888":null,"GO:0072542":null}}


id: PBO:0083422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YPL034W; YPL035C is not an essential gene","termid":"PBO:0083422"}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: PBO:0046943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member E","termid":"PBO:0046943"}


id: GO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose = UDP-beta-L-arabinopyranose.","definition_xrefs":["EC:5.4.99.30","RHEA:28350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-arabinopyranose mutase activity","secondary_identifiers":["MetaCyc:RXN-11552"],"synonyms":[{"name":"UDP-L-Ara mutase activity","type":"related"},{"name":"UDP-L-arabinopyranose furanomutase activity","type":"related"},{"name":"UDP-L-arabinose mutase activity","type":"related"},{"name":"UDP-arabinopyranose pyranomutase activity","type":"exact"},{"name":"uridine-diphosphate-L-arabinose mutase activity","type":"related"}],"termid":"GO:0052691"}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["PMID:12060258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: PBO:0070698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 2","termid":"PBO:0070698"}


id: GO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = epi-cedrol + diphosphate.","definition_xrefs":["RHEA:26115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"epi-cedrol synthase activity","secondary_identifiers":["KEGG_REACTION:R09140","EC:4.2.3.39","MetaCyc:RXN-10004"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase (8-epi-cedrol-forming) activity","type":"exact"},{"name":"8-epicedrol synthase activity","type":"exact"},{"name":"epicedrol synthase activity","type":"exact"}],"termid":"GO:0052682"}


id: CHEBI:34653
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Congo Red","termid":"CHEBI:34653"}


id: PBO:0052859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: PBO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPX chromosome region candidate 1","termid":"PBO:0043845"}


id: MOD:00988
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated tyrosine","synonyms":[{"name":"BrTyr","type":"exact"}],"termid":"MOD:00988"}


id: PBO:0072890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBNO1 antisense RNA 1","termid":"PBO:0072890"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: GO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of cardiac progenitor cells to one another that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cardioblast cell midline fusion","synonyms":[{"name":"cardiac progenitor cell midline fusion","type":"exact"}],"termid":"GO:0003317"}


id: FYPO:0006342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule binding","synonyms":[{"name":"reduced microtubule binding","type":"exact"}],"termid":"FYPO:0006342"}


id: PBO:0083622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core","termid":"PBO:0083622"}


id: PR:Q9USW2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheritance of peroxisomes protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.06c","synonyms":[{"name":"Spom972h-inp2","type":"exact"}],"termid":"PR:Q9USW2"}


id: GO:0160057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant endodermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:26415082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell fate specification","termid":"GO:0160057"}


id: FYPO:0005386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin along chromosome arms is decreased.","definition_xrefs":["PMID:16682348","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at chromosome arms","synonyms":[{"name":"decreased protein localisation to chromatin at chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin along chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin at chromosome arms during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome arms during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at chromosome arms","type":"exact"}],"termid":"FYPO:0005386"}


id: PBO:0063670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 2","termid":"PBO:0063670"}


id: GO:0098774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous extracellular fiber, produced by an enteric bacterium, that is involved in surface and cell-cell contacts that promote community behavior and host colonization.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"},{"relation_name":"part_of","term_name":"bacterial biofilm matrix","termid":"GO:0097311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"curli","synonyms":[{"name":"tafi","type":"narrow"},{"name":"thin aggregative fimbrae","type":"narrow"}],"termid":"GO:0098774"}


id: GO:0009049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by an aspartic endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartic-type signal peptidase activity (obsolete GO:0009049)","synonyms":[{"name":"aspartic-type signal peptidase activity","type":"exact"}],"termid":"GO:0009049"}


id: PBO:0057915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3618","termid":"PBO:0057915"}


id: PBO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 3","termid":"PBO:0039556"}


id: PBO:0028712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_global_homologous_chromosome_pairing","termid":"PBO:0028712"}


id: PBO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 2","termid":"PBO:0045863"}


id: PBO:0075391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp4 transcription factor","termid":"PBO:0075391"}


id: FYPO:0008063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following osmotic shock. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:36200871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following osmotic shock","termid":"FYPO:0008063"}


id: PBO:0029874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation","termid":"PBO:0029874"}


id: GO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + O2 = acetate + CO2 + H2O.","definition_xrefs":["RHEA:16513","EC:1.13.12.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00319","MetaCyc:LACTATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(S)-lactate:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"L-lactate monooxygenase activity","type":"related"},{"name":"L-lactate-2-monooxygenase activity","type":"related"},{"name":"lactate monooxygenase activity","type":"related"},{"name":"lactate oxidase activity","type":"related"},{"name":"lactate oxidative decarboxylase activity","type":"related"},{"name":"lactate oxygenase activity","type":"related"},{"name":"lactic oxidase activity","type":"related"},{"name":"lactic oxygenase activity","type":"related"}],"termid":"GO:0050040"}


id: PBO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter, pseudogene","termid":"PBO:0003018"}


id: GO:0002806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide biosynthetic process","synonyms":[{"name":"down regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"downregulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"inhibition of antimicrobial peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002806"}


id: GO:0008785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol.","definition_xrefs":["UM-BBD_reactionID:r0684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase activity","secondary_identifiers":["Reactome:R-HSA-1222526"],"termid":"GO:0008785"}


id: GO:1900469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8614637","PMID:8056324","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylserine formation","type":"exact"},{"name":"down regulation of phosphatidylserine synthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylserine formation","type":"exact"},{"name":"down-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"downregulation of phosphatidylserine anabolism","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylserine formation","type":"exact"},{"name":"downregulation of phosphatidylserine synthesis","type":"exact"},{"name":"inhibition of phosphatidylserine anabolism","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthesis","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylserine formation","type":"exact"},{"name":"inhibition of phosphatidylserine synthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine formation","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900469"}


id: PBO:0029724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_1C_DNA_content","termid":"PBO:0029724"}


id: GO:0034958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aminohydroquinone + 2 e- + 2 H+ + 1/2 O2 = 1,2,4-benzenetriol + NH3.","definition_xrefs":["UM-BBD_reactionID:r1497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"aminohydroquinone monooxygenase activity","secondary_identifiers":["EC:3.5.99.-"],"termid":"GO:0034958"}


id: PBO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKE antisense RNA 1","termid":"PBO:0051508"}


id: PBO:0028609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_urease_activity","termid":"PBO:0028609"}


id: PBO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 15","termid":"PBO:0070785"}


id: PR:Q9Y7L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit sigma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11753:SF6","PRO:DNx","OMA:SCHPO03413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit sigma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.04c","secondary_identifiers":["UniProtKB:Q9Y7L6"],"synonyms":[{"name":"Spom972h-AP2S1","type":"exact"},{"name":"adaptin small chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein 2 sigma small chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7L6"}


id: GO:0140733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a tRNA ligase.","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"tRNA ligase activator activity","termid":"GO:0140733"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: PBO:0086115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytochrome c oxidase assembly; located in the cytosol and mitochondrial intermembrane space; putative copper metallochaperone that delivers copper to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0086115"}


id: FYPO:0004960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondria is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"},{"relation_name":"is_a","term_name":"normal level of substance in mitochondrion","termid":"FYPO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial RNA level","synonyms":[{"name":"normal mitochondrial RNA accumulation","type":"related"},{"name":"normal mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"normal mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0004960"}


id: GO:0052641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoic acid + UDP-glucose = benzoic acid glucose ester + UDP.","definition_xrefs":["MetaCyc:RXN-11660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"benzoic acid glucosyltransferase activity","synonyms":[{"name":"UDP:glucose:BA glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoate glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoic acid glucosyltransferase activity","type":"exact"},{"name":"benzoate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052641"}


id: FYPO:0005526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of organelles or other particles along microtubules is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased transport along microtubule during vegetative growth","synonyms":[{"name":"decreased establishment of localization by movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased microtubule-based transport during vegetative growth","type":"broad"},{"name":"decreased movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005526"}


id: PBO:0043956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma A","termid":"PBO:0043956"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731","SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90064,93649,95213,108492],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["RHEA:38567","PMID:16452632","GOC:ab","PMID:20224745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: GO:1903477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any actin filament bundle assembly that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring actin filament bundle assembly","termid":"GO:0071519"},{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring assembly actin filament organization","termid":"GO:1903479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000281","GO:0008150","GO:0007049","GO:0030036"],"is_obsolete":false,"name":"mitotic contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903477"}


id: GO:0097142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of PUMA and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PUMA-BCL-2 complex","termid":"GO:0097142"}


id: GO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoaphin aglucone = H2O + xanthoaphin.","definition_xrefs":["RHEA:23876","EC:4.2.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"protoaphin-aglucone dehydratase (cyclizing) activity","secondary_identifiers":["KEGG_REACTION:R03742","MetaCyc:4.2.1.73-RXN"],"synonyms":[{"name":"protoaphin dehydratase (cyclizing)","type":"related"},{"name":"protoaphin dehydratase activity","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing)","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing; xanthoaphin-forming)","type":"related"}],"termid":"GO:0047452"}


id: GO:0033962
data:
  {"annotated_genes":["SJAG_03023","SJAG_03157","SJAG_02213","SJAG_02638","SJAG_03460","SJAG_03070","SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88107,101426,102005,104451,107978,108134,108884],"is_not":false,"summary":null,"term":"GO:0033962"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["PMID:17429074","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02213":null,"SJAG_02638":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03157":null,"SJAG_03460":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P-body assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P body assembly","type":"exact"},{"name":"P body biogenesis","type":"related"},{"name":"cytoplasmic mRNA processing body assembly","type":"exact"}],"termid":"GO:0033962","terms_by_termid":{"GO:0033962":null}}


id: GO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydromethanopterin + L-serine = 5,10-methylenetetrahydromethanopterin + glycine + H2O.","definition_xrefs":["PMID:12902326","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tetrahydromethanopterin-dependent serine hydroxymethyltransferase activity","secondary_identifiers":["EC:2.1.2.-"],"termid":"GO:0044685"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: GO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin catabolic process","synonyms":[{"name":"saponin breakdown","type":"exact"},{"name":"saponin catabolism","type":"exact"},{"name":"saponin degradation","type":"exact"}],"termid":"GO:0016136"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: GO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA.","definition_xrefs":["MetaCyc:BUTYRATE--COA-LIGASE-RXN","EC:6.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"butyrate-CoA ligase activity","secondary_identifiers":["RHEA:24336","Reactome:R-HSA-8875013"],"synonyms":[{"name":"L-(+)-3-hydroxybutyryl CoA ligase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"related"},{"name":"butanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"butyryl-CoA synthetase activity","type":"related"},{"name":"butyryl-coenzyme A synthetase activity","type":"related"},{"name":"fatty acid activating enzyme","type":"related"},{"name":"fatty acid thiokinase (medium chain) activity","type":"related"},{"name":"fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"medium chain acyl-CoA synthetase activity","type":"related"},{"name":"short-chain acyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047760"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: PBO:0028547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_copper_ion_starvation","termid":"PBO:0028547"}


id: PBO:0012597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1 family chromodomain protein 2","termid":"PBO:0012597"}


id: PBO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 1","termid":"PBO:0048540"}


id: PBO:0111835
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF4 family","termid":"PBO:0111835"}


id: GO:0050290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide 1-phosphate + choline + H+.","definition_xrefs":["RHEA:20984","EC:3.1.4.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase D activity","secondary_identifiers":["KEGG_REACTION:R02542","MetaCyc:SPHINGOMYELIN-PHOSPHODIESTERASE-D-RXN"],"synonyms":[{"name":"sphingomyelin ceramide-phosphohydrolase activity","type":"related"},{"name":"sphingomyelinase D","type":"related"}],"termid":"GO:0050290"}


id: GO:0102656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-18:2-2-trans-16:1-phosphatidylglycerol desaturase activity","secondary_identifiers":["MetaCyc:RXN-1727"],"termid":"GO:0102656"}


id: PBO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 7","termid":"PBO:0072020"}


id: PBO:0079822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like autophagy activating kinase 1","termid":"PBO:0079822"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: FYPO:0005354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at the RTS1 barrier in the mating type region is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"normal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005354"}


id: GO:0097005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone receptor. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["GOC:sart","PMID:11904407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"adipokinetic hormone receptor binding","synonyms":[{"name":"AKH receptor binding","type":"exact"}],"termid":"GO:0097005"}


id: PBO:0072602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase related","termid":"PBO:0072602"}


id: PBO:0030907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_vegetative_growth","termid":"PBO:0030907"}


id: SO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=-79.0 - psi(i+1)=69.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_inverse","secondary_identifiers":["BS:00221"],"synonyms":[{"name":"gamma turn inverse","type":"exact"}],"termid":"SO:0001140"}


id: PBO:0052979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta 2","termid":"PBO:0052979"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: PBO:0005198
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open-angle glaucoma","termid":"PBO:0005198"}


id: GO:0140337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to diacylglyceride and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"diacylglyceride transfer activity","synonyms":[{"name":"diacylglyceride carrier activity","type":"exact"}],"termid":"GO:0140337"}


id: PBO:0089336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc1","termid":"PBO:0089336"}


id: PBO:0085264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in the vacuolar membrane; VBA3 has a paralog, VBA5, that arose from a segmental duplication","termid":"PBO:0085264"}


id: PBO:0077593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 4","termid":"PBO:0077593"}


id: PBO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 antisense RNA 1","termid":"PBO:0047828"}


id: PBO:0025419
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic disorders","termid":"PBO:0025419"}


id: GO:0010451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a floral meristem, a population of undifferentiated cells in a plant that gives rise to a flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral meristem growth","termid":"GO:0010451"}


id: PBO:0091488
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ErMes Regulator","termid":"PBO:0091488"}


id: GO:0033007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of mast cell activation","termid":"GO:0033004"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation involved in immune response","synonyms":[{"name":"negative regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033007"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: PATO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000601 spatial value (obsolete PATO:0000601)","termid":"PATO:0000601"}


id: PBO:0004487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php5","termid":"PBO:0004487"}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: GO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon regeneration.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"positive regulation of neuron projection regeneration","termid":"GO:0070572"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon regeneration","synonyms":[{"name":"activation of axon regeneration","type":"narrow"},{"name":"stimulation of axon regeneration","type":"narrow"},{"name":"up regulation of axon regeneration","type":"exact"},{"name":"up-regulation of axon regeneration","type":"exact"},{"name":"upregulation of axon regeneration","type":"exact"}],"termid":"GO:0048680"}


id: GO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.","definition_xrefs":["GOC:dph","PMID:10978835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"part_of","term_name":"auditory receptor cell morphogenesis","termid":"GO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell stereocilium organization","synonyms":[{"name":"auditory receptor cell stereocilium organisation","type":"exact"},{"name":"auditory receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060088"}


id: FYPO:0003043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Mei2 nuclear dot","termid":"FYPO:0002958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to Mei2 nuclear dot","synonyms":[{"name":"increased protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"increased protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0003043"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_00612","SJAG_04325","SJAG_00434","SJAG_04162","SJAG_01960","SJAG_00154","SJAG_04328","SJAG_03334","SJAG_03452","SJAG_03503","SJAG_00339","SJAG_00760","SJAG_04697","SJAG_01357","SJAG_01177","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[87474,86359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[103458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[84470,88951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[84471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[111211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[95042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[108358,111629,83848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[100814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[100815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01357":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: MOD:00247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-serine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0242","PubMed:8183941","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Ser-Cys)","type":"exact"},{"name":"L-serine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00247"}


id: GO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the rhamnose-binding lectin (RBL) family, a family of animal lectins that show specific binding activities to L-rhamnose or D-galactose.","definition_xrefs":["PMID:22312473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RBL family protein binding","synonyms":[{"name":"rhamnose-binding lectin family protein binding","type":"exact"}],"termid":"GO:0061675"}


id: GO:0010856
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89856],"is_not":false,"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of adenylate cyclase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activator activity","termid":"GO:0010853"},{"relation_name":"is_a","term_name":"adenylate cyclase regulator activity","termid":"GO:0010854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"adenylate cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010856","terms_by_termid":{"GO:0010856":null}}


id: PBO:0001379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.8","termid":"PBO:0001379"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:22704558","PMID:22705370","PMID:22759634","PMID:22888405","PMID:21078962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: SO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two H-bonds in which: Residue(i) is Aspartate or Asparagine (Asx), side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3), main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_motif","secondary_identifiers":["BS:00202"],"synonyms":[{"name":"asx motif","type":"exact"}],"termid":"SO:0001106"}


id: PBO:0108684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP","termid":"PBO:0108684"}


id: PBO:0040981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 like 1","termid":"PBO:0040981"}


id: GO:0015936
data:
  {"annotated_genes":["SJAG_01139","SJAG_05277","SJAG_04627","SJAG_04288","SJAG_00427","SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87763,110896,84879,113144,106547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_01139":null,"SJAG_02247":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"coenzyme A metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006763"],"synonyms":[{"name":"CoA metabolism","type":"exact"},{"name":"coenzyme A metabolism","type":"exact"}],"termid":"GO:0015936","terms_by_termid":{"GO:0015937":null,"GO:0015938":null}}


id: PBO:0066205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 19","termid":"PBO:0066205"}


id: RO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_flowers_visited_by","termid":"RO:0002623"}


id: GO:0042009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-15.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-15 binding","synonyms":[{"name":"IL-15 binding","type":"exact"}],"termid":"GO:0042009"}


id: GO:0140110
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id: GO:1901017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"down regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"down regulation of potassium transporter activity","type":"exact"},{"name":"down-regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"down-regulation of potassium transporter activity","type":"exact"},{"name":"downregulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"downregulation of potassium transporter activity","type":"exact"},{"name":"inhibition of potassium ion transmembrane transporter activity","type":"narrow"},{"name":"inhibition of potassium transporter activity","type":"exact"},{"name":"negative regulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901017"}


id: PBO:0059165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein MPV17","termid":"PBO:0059165"}


id: PBO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_C-shaped_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034646"}


id: GO:1902990
data:
  {"annotated_genes":["SJAG_01777","SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85266,95450],"is_not":false,"summary":null,"term":"GO:1902990"}]},"cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"mitotic telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equal telomere replication involved in mitotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in mitotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:1902990","terms_by_termid":{"GO:1902990":null}}


id: _global:evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is evidence_for_feature A, if an instance of B supports the existence of A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence_for_feature","termid":"_global:evidence_for_feature"}


id: PBO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily V member 2","termid":"PBO:0052221"}


id: GO:0019713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The coupled methyl esterification and deamidation of peptidyl-glutamine.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from glutamine (obsolete GO:0019713)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from glutamine","type":"exact"}],"termid":"GO:0019713"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: GO:0019206
data:
  {"annotated_genes":["SJAG_01070","SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[88571,110977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[88573,110979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_01070":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleoside kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73598","Reactome:R-HSA-109903","Reactome:R-HSA-73599","Reactome:R-HSA-110138","Reactome:R-HSA-109671","Reactome:R-HSA-73632","Reactome:R-HSA-110137","Reactome:R-HSA-109759"],"termid":"GO:0019206","terms_by_termid":{"GO:0004001":null,"GO:0004849":null,"GO:0043771":null}}


id: PR:Q9USI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","PMID:15184401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.05c","secondary_identifiers":["UniProtKB:Q9USI6","PR:000027729"],"synonyms":[{"name":"SPCC645.05C","type":"related"},{"name":"Spom972h-myo2","type":"exact"}],"termid":"PR:Q9USI6"}


id: GO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.","definition_xrefs":["RESID:AA0187"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (obsolete GO:0018313)","termid":"GO:0018313"}


id: GO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the clypeus are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"clypeus development","termid":"GO:0048723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus morphogenesis","termid":"GO:0048721"}


id: PBO:0072520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 49","termid":"PBO:0072520"}


id: PBO:0081817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 10, Y-linked","termid":"PBO:0081817"}


id: PBO:0039442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH divergent transcript","termid":"PBO:0039442"}


id: GO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle fiber development","synonyms":[{"name":"regulation of cardiac muscle fibre development","type":"exact"},{"name":"regulation of heart muscle fiber development","type":"exact"}],"termid":"GO:0055018"}


id: GO:1902744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:16054028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"negatively_regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium organization","synonyms":[{"name":"down regulation of lamellipodium organization","type":"exact"},{"name":"down-regulation of lamellipodium organization","type":"exact"},{"name":"downregulation of lamellipodium organization","type":"exact"},{"name":"inhibition of lamellipodium organization","type":"narrow"}],"termid":"GO:1902744"}


id: PBO:0013828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nam edescription, PantoThenate Kinase","termid":"PBO:0013828"}


id: PBO:0059320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 3","termid":"PBO:0059320"}


id: PR:Q9USZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle 20 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.04","secondary_identifiers":["UniProtKB:Q9USZ5"],"synonyms":[{"name":"Spom972h-TRAPPC2","type":"exact"},{"name":"TRAPP 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ5"}


id: GO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose on to a glucose residue in xyloglucan, forming a beta-1,4-D-glucosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.1.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"xyloglucan 4-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12419"],"synonyms":[{"name":"UDP-glucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-xyloglucan 4beta-glucosyltransferase activity","type":"related"},{"name":"xyloglucan 4beta-D-glucosyltransferase activity","type":"related"},{"name":"xyloglucan glucosyltransferase activity","type":"related"}],"termid":"GO:0033826"}


id: PBO:0003037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter Aat1 (predicted)","termid":"PBO:0003037"}


id: PBO:0038901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B3","termid":"PBO:0038901"}


id: PBO:0088767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1","termid":"PBO:0088767"}


id: GO:0047111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferricytochrome C-553 + formate = ferrocytochrome C-553 + CO2.","definition_xrefs":["EC:1.17.2.3","MetaCyc:1.2.2.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome-c-553) activity","secondary_identifiers":["RHEA:15189"],"synonyms":[{"name":"formate dehydrogenase (cytochrome c-553)","type":"related"},{"name":"formate:ferricytochrome-c-553 oxidoreductase activity","type":"related"}],"termid":"GO:0047111"}


id: GO:0046943
data:
  {"annotated_genes":["SJAG_02941","SJAG_03829","SJAG_04984","SJAG_01406","SJAG_02062","SJAG_02780","SJAG_04725","SJAG_02011","SJAG_02140","SJAG_03256","SJAG_00232","SJAG_00522","SJAG_01924","SJAG_01960","SJAG_04903","SJAG_02029","SJAG_00626","SJAG_02955","SJAG_00877","SJAG_04296","SJAG_05175","SJAG_03899","SJAG_02150","SJAG_04787","SJAG_00543","SJAG_02133","SJAG_01344","SJAG_05325","SJAG_04588","SJAG_01505","SJAG_01994","SJAG_01096","SJAG_02947","SJAG_04905","SJAG_04593","SJAG_00275","SJAG_00015","SJAG_06598","SJAG_04957","SJAG_02946","SJAG_04637","SJAG_03503","SJAG_01770","SJAG_04295","SJAG_04706","SJAG_04135","SJAG_05342","SJAG_02113","SJAG_01998","SJAG_00051","SJAG_03400","SJAG_00276","SJAG_03827","SJAG_00671","SJAG_01872","SJAG_04718","SJAG_02144","SJAG_00019","SJAG_00149","SJAG_03644","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70746,78116,78244,82914],"is_not":false,"summary":null,"term":"GO:0046943"},{"annotations":[94430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[92250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[83069,83026,83028,109744,83030,114340,99597,76119,83068,83025,114339,114341,105360,105367,83029,101904,83024,95769,114342,83027,74468,75428,85206,99355,83067,114337,114344,114537,83023,115090,106533,114343,83070,114338,114445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015171"},{"annotations":[85916,91376,90239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[92751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015127"},{"annotations":[87606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[109738,115094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[87601,87607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[103459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[88050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[93945,95988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[83898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[91710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[91711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[99673,96118,93065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98604,105964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[93946,92252,99674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[99675,93066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98605,105965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[98606,96119,93067,99676,105966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[93947,103812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96110,96994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99677,86137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99678,93068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[90682,114540,97443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[83899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[104199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[88952,108240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[110211,90025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[97446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[108246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_00877":null,"SJAG_01096":null,"SJAG_01344":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01770":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02011":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02140":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04905":null,"SJAG_04957":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null,"SJAG_05342":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-390347"],"termid":"GO:0046943","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015127":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015171":null,"GO:0015174":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: GO:2000068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to insect","synonyms":[{"name":"regulation of physiological defense response to insect","type":"exact"}],"termid":"GO:2000068"}


id: PBO:0053262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF receptor subunit alpha","termid":"PBO:0053262"}


id: PBO:0070484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 19","termid":"PBO:0070484"}


id: GO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vinylacetyl-CoA = (2E)-butenoyl-CoA.","definition_xrefs":["RHEA:10572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vinylacetyl-CoA delta-isomerase activity","secondary_identifiers":["KEGG_REACTION:R03031","MetaCyc:VINYLACETYL-COA-DELTA-ISOMERASE-RXN","EC:5.3.3.3"],"synonyms":[{"name":"delta3-cis-delta2-trans-enoyl-CoA isomerase","type":"broad"},{"name":"vinylacetyl coenzyme A delta-isomerase activity","type":"related"},{"name":"vinylacetyl coenzyme A isomerase activity","type":"related"},{"name":"vinylacetyl-CoA D-isomerase activity","type":"exact"},{"name":"vinylacetyl-CoA delta3-delta2-isomerase activity","type":"related"}],"termid":"GO:0050393"}


id: FYPO:0003408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylglyoxal. Cells stop growing (and may die) at a concentration of methylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methylglyoxal","synonyms":[{"name":"hypersensitive to methylglyoxal","type":"exact"},{"name":"sensitive to MG","type":"broad"},{"name":"sensitive to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0003408"}


id: PBO:0087256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh1p; PKH2 has a paralog, PKH1, that arose from the whole genome duplication","termid":"PBO:0087256"}


id: PBO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 15","termid":"PBO:0071877"}


id: PBO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 4","termid":"PBO:0050036"}


id: GO:1903482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903482)","synonyms":[{"name":"activation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"activation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903482"}


id: PBO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 34","termid":"PBO:0072505"}


id: PBO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B14, pseudogene","termid":"PBO:0061336"}


id: GO:0102068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,4E,8E)-alpha-humulene + NADPH + O2 + H+ = 10-hydroxy-alpha-humulene + NADP + H2O.","definition_xrefs":["EC:1.14.14.113","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alpha-humulene 10-hydroxylase activity","secondary_identifiers":["RHEA:32491","MetaCyc:RXN-10628"],"termid":"GO:0102068"}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: FYPO:0000596
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115214],"is_not":false,"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal transposable element transposition","type":"exact"},{"name":"normal transposition during mitotic cell cycle","type":"related"},{"name":"normal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: normal","type":"related"}],"termid":"FYPO:0000596","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO_EXT:0000001":null}}


id: GO:0032366
data:
  {"annotated_genes":["SJAG_00261","SJAG_01407","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97258,97449,102199],"is_not":false,"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_01329":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intracellular sterol transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032366","terms_by_termid":{"GO:0032366":null}}


id: GO:0047558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine = 3-cyano-L-alanine + H2O + H+.","definition_xrefs":["EC:4.2.1.65","RHEA:15385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-cyanoalanine hydratase activity","secondary_identifiers":["KEGG_REACTION:R01267","MetaCyc:3-CYANOALANINE-HYDRATASE-RXN"],"synonyms":[{"name":"L-asparagine hydro-lyase (3-cyanoalanine-forming)","type":"related"},{"name":"L-asparagine hydro-lyase activity","type":"related"},{"name":"beta-CNA nitrilase activity","type":"related"},{"name":"beta-CNAla hydrolase activity","type":"related"},{"name":"beta-cyanoalanine hydratase activity","type":"related"},{"name":"beta-cyanoalanine hydrolase activity","type":"related"}],"termid":"GO:0047558"}


id: PBO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine","termid":"PBO:0001090"}


id: GO:0032479
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032727"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479","terms_by_termid":{"GO:0032727":null}}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: GO:0061480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an asparaginase stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to asparaginase","termid":"GO:0061480"}


id: PBO:0078511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 5","termid":"PBO:0078511"}


id: PBO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBR1 autophagy cargo receptor","termid":"PBO:0060588"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: GO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification in which bone formation occurs as result of the direct transformation of non-bone cells into bone cells without cell division.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaplastic ossification","synonyms":[{"name":"metaplasia","type":"related"}],"termid":"GO:0036074"}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


