# terms

id: GO:0015742
data:
  {"annotated_genes":["SJAG_00275","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108244],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[92249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: FYPO:0005728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint is normal (i.e. indistinguishable from wild type. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:19592249","PMID:21664573","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle assembly checkpoint","termid":"FYPO:0003762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0000257"],"is_obsolete":false,"name":"normal deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"normal deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"normal mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"normal mitotic spindle assembly checkpoint silencing","type":"exact"}],"termid":"FYPO:0005728"}


id: PBO:0049094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 151","termid":"PBO:0049094"}


id: GO:0004746
data:
  {"annotated_genes":["SJAG_02360","SJAG_02491"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106319,110835],"is_not":false,"summary":null,"term":"GO:0004746"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+ = 5-amino-6-(D-ribitylamino)uracil + riboflavin.","definition_xrefs":["EC:2.5.1.9","RHEA:20772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02360":null,"SJAG_02491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"riboflavin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00066","MetaCyc:RIBOFLAVIN-SYN-RXN"],"synonyms":[{"name":"6,7-dimethyl-8-(1-D-ribityl)lumazine:6,7-dimethyl-8-(1-D-ribityl)lumazine 2,3-butanediyltransferase activity","type":"related"},{"name":"heavy riboflavin synthase","type":"narrow"},{"name":"light riboflavin synthase","type":"narrow"},{"name":"lumazine synthase activity","type":"broad"},{"name":"riboflavin synthetase activity","type":"related"},{"name":"riboflavine synthase activity","type":"related"},{"name":"riboflavine synthetase activity","type":"related"},{"name":"vitamin B2 synthase activity","type":"exact"}],"termid":"GO:0004746","terms_by_termid":{"GO:0004746":null}}


id: PBO:0055145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2564","termid":"PBO:0055145"}


id: GO:1904464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GOC:TermGenie","PMID:8679543","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of matrix metallopeptidase secretion","synonyms":[{"name":"regulation of MMP secretion","type":"exact"},{"name":"regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904464"}


id: GO:0008641
data:
  {"annotated_genes":["SJAG_02084","SJAG_00878","SJAG_05032","SJAG_00604","SJAG_02082","SJAG_00853","SJAG_03950","SJAG_00645","SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87444],"is_not":false,"summary":null,"term":"GO:0008641"},{"annotations":[107663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[107664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[92172,90245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[100317,93469,91887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[99590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[91675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ubiquitin-like modifier activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008642"],"synonyms":[{"name":"small protein activating enzyme activity","type":"narrow"}],"termid":"GO:0008641","terms_by_termid":{"GO:0004839":null,"GO:0008641":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0042292":null}}


id: PBO:0027369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_amino_acid_level","termid":"PBO:0027369"}


id: PR:Q10227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E12.03c gene.","definition_xrefs":["UniProtKB:Q10227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2E12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.03c","synonyms":[{"name":"Spom972h-SPAC2E12.03c","type":"exact"}],"termid":"PR:Q10227"}


id: GO:0102971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphinothricin = H+ + coenzyme A(4-) + N-acetylphosphinatothricinate.","definition_xrefs":["EC:2.3.1.183","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"phosphinothricin N-acetyltransferase activity","secondary_identifiers":["RHEA:12597","MetaCyc:RXN-9382"],"termid":"GO:0102971"}


id: PBO:0039614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 1","termid":"PBO:0039614"}


id: GO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"}],"termid":"GO:0002814"}


id: PBO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 8","termid":"PBO:0075196"}


id: GO:1901846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["PMID:17130302","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling involved in cardiac conduction","synonyms":[{"name":"activation of cell communication by electrical coupling involved in cardiac conduction","type":"narrow"},{"name":"up regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"up-regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"upregulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"}],"termid":"GO:1901846"}


id: SO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding phenylalanyl tRNA (SO:0000267).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine_tRNA_primary_transcript","synonyms":[{"name":"phenylalanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000224"}


id: PBO:0038743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 2","termid":"PBO:0038743"}


id: PBO:0047281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group E","termid":"PBO:0047281"}


id: PBO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor (predicted)","termid":"PBO:0003770"}


id: PBO:0082773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p","termid":"PBO:0082773"}


id: GO:0042844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["PMID:9851711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycol metabolic process","synonyms":[{"name":"dihydric alcohol metabolic process","type":"broad"},{"name":"dihydric alcohol metabolism","type":"broad"},{"name":"glycol metabolism","type":"exact"}],"termid":"GO:0042844"}


id: GO:0045957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, alternative pathway","termid":"GO:0030451"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, alternative pathway","synonyms":[{"name":"down regulation of complement activation, alternative pathway","type":"exact"},{"name":"down-regulation of complement activation, alternative pathway","type":"exact"},{"name":"downregulation of complement activation, alternative pathway","type":"exact"},{"name":"inhibition of complement activation, alternative pathway","type":"narrow"},{"name":"negative regulation of complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0045957"}


id: PBO:0089652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic23/26/27","termid":"PBO:0089652"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: PBO:0074517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A9","termid":"PBO:0074517"}


id: PBO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 28","termid":"PBO:0052789"}


id: PBO:0045921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB14 antisense RNA 1","termid":"PBO:0045921"}


id: PBO:0067735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 34","termid":"PBO:0067735"}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: FYPO:0000690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased oxidoreductase activity","synonyms":[{"name":"reduced oxidoreductase activity","type":"exact"}],"termid":"FYPO:0000690"}


id: GO:0010347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactose-1-phosphate + H2O = L-galactose + phosphate.","definition_xrefs":["PMID:15550539","PMID:16595667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"L-galactose-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXNQT-4142","RHEA:26349"],"termid":"GO:0010347"}


id: GO:0030979
data:
  {"annotated_genes":["SJAG_03057","SJAG_04236","SJAG_01028","SJAG_04666","SJAG_00610","SJAG_00424","SJAG_02916","SJAG_02278","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110430],"is_not":false,"summary":null,"term":"GO:0030979"},{"annotations":[100006,104992,110431,113879,84641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[84942,98650,87983,90588],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan anabolism","type":"exact"},{"name":"alpha-glucan biosynthesis","type":"exact"},{"name":"alpha-glucan formation","type":"exact"},{"name":"alpha-glucan synthesis","type":"exact"}],"termid":"GO:0030979","terms_by_termid":{"GO:0030979":null,"GO:0070600":null,"GO:0070610":null}}


id: PBO:0062592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 2 pseudogene","termid":"PBO:0062592"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94258],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["EC:2.1.1.10","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21820","MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: PBO:0068219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 526","termid":"PBO:0068219"}


id: GO:0098001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion receptor-mediated virion attachment to host cell","termid":"GO:0098671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage reversible attachment to host cell","synonyms":[{"name":"phage reversible adsorption","type":"related"},{"name":"reversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0098001"}


id: PBO:0011138
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOsphate metabolism","termid":"PBO:0011138"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: GO:1902653
data:
  {"annotated_genes":["SJAG_02044","SJAG_02104","SJAG_03598","SJAG_03715","SJAG_03352","SJAG_03750","SJAG_00580","SJAG_02719","SJAG_03018","SJAG_00624","SJAG_03024","SJAG_03929","SJAG_01474","SJAG_03349","SJAG_03249","SJAG_00717","SJAG_03235","SJAG_02982","SJAG_00370","SJAG_04810","SJAG_02068","SJAG_04270","SJAG_04018","SJAG_03531","SJAG_04049","SJAG_03509","SJAG_04217","SJAG_04059","SJAG_00158","SJAG_02855","SJAG_00770","SJAG_00413","SJAG_05311","SJAG_01307","SJAG_04865","SJAG_04790","SJAG_04499","SJAG_00453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114959,106020,84250,103607,107778,85157,105164,110960,100295,93754,95326,88155,92279,100102,112629,102402,90075,111295,83959,94581,87017,84215,100535,103744,108527,99829,84186,105410,103419,90277,111135,107265,99174,88101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89508],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105784],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105785],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84047,101705,84046],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary alcohol.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:11288200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"secondary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol anabolism","type":"exact"},{"name":"secondary alcohol biosynthesis","type":"exact"},{"name":"secondary alcohol formation","type":"exact"},{"name":"secondary alcohol synthesis","type":"exact"}],"termid":"GO:1902653","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:1901536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA demethylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA demethylation","termid":"GO:1901535"},{"relation_name":"negatively_regulates","term_name":"DNA demethylation","termid":"GO:0080111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA demethylation","synonyms":[{"name":"down regulation of DNA demethylation","type":"exact"},{"name":"down-regulation of DNA demethylation","type":"exact"},{"name":"downregulation of DNA demethylation","type":"exact"},{"name":"inhibition of DNA demethylation","type":"narrow"}],"termid":"GO:1901536"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: GO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of sevenless signaling pathway","synonyms":[{"name":"regulation of sev signaling pathway","type":"exact"},{"name":"regulation of sevenless signalling pathway","type":"exact"}],"termid":"GO:0045501"}


id: FYPO:0007580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase B of mitosis.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0005211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase B","type":"exact"}],"termid":"FYPO:0007580"}


id: PBO:0027111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_cell_wall_disassembly_at_cell_fusion_site","termid":"PBO:0027111"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: GO:0030304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase trypsin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trypsin inhibitor activity (obsolete GO:0030304)","synonyms":[{"name":"trypsin inhibitor activity","type":"exact"}],"termid":"GO:0030304"}


id: PATO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000680 absolute temporal value (obsolete PATO:0000680)","termid":"PATO:0000680"}


id: GO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mature B cell apoptotic process","synonyms":[{"name":"regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002905"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: PBO:0077781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TONSL antisense RNA 1","termid":"PBO:0077781"}


id: PBO:0075785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 8B, pseudogene","termid":"PBO:0075785"}


id: GO:2000624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:2000622"},{"relation_name":"positively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0044248"],"is_obsolete":false,"name":"positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"positive regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"positive regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"positive regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"positive regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"positive regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"positive regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000624"}


id: GO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa > Lys-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acrosin activity (obsolete GO:0004284)","synonyms":[{"name":"acrozonase activity","type":"related"},{"name":"alpha-acrosin","type":"related"},{"name":"beta-acrosin","type":"related"},{"name":"psi-acrosin","type":"related"},{"name":"acrosin activity","type":"exact"},{"name":"acrosin amidase activity","type":"related"},{"name":"acrosomal protease activity","type":"related"},{"name":"acrosomal proteinase activity","type":"related"}],"termid":"GO:0004284"}


id: PBO:0080526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 8, pseudogene","termid":"PBO:0080526"}


id: GO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An apical protein complex that contains the proteins Kibra, Expanded and Merlin (Mer), or orthologs thereof. In humans, the complex contains KIBRA, FDM6 and NF2.","definition_xrefs":["PMID:20159598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kibra-Ex-Mer complex","synonyms":[{"name":"KEM complex","type":"exact"},{"name":"Kbr, Ex and Mer complex","type":"exact"}],"termid":"GO:0036375"}


id: PBO:0056592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing glycosylphosphatidylinositol anchor 1","termid":"PBO:0056592"}


id: GO:0008955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-diphosphoundecaprenol + GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol = [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-diphosphoundecaprenol + undecaprenyl diphosphate.","definition_xrefs":["EC:2.4.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan glycosyltransferase activity","secondary_identifiers":["RHEA:23708","MetaCyc:RXN-14712"],"synonyms":[{"name":"PG-II activity","type":"related"},{"name":"bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"penicillin binding protein (3 or 1B) activity","type":"narrow"},{"name":"peptidoglycan TGase activity","type":"related"},{"name":"peptidoglycan transglycosylase activity","type":"related"},{"name":"undecaprenyldiphospho-N-acetyl-D-glucosaminyl-(1->4)-(N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase activity","type":"related"}],"termid":"GO:0008955"}


id: SO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal_peptide is a short region of the peptide located at the N-terminus that directs the protein to be secreted or part of membrane components.","direct_ancestors":[{"relation_name":"derives_from","term_name":"signal_peptide_region_of_CDS","termid":"SO:0002251"},{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"},{"relation_name":"part_of","term_name":"propeptide","termid":"SO:0001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"signal_peptide","secondary_identifiers":["BS:00159","http://en.wikipedia.org/wiki/Signal_peptide"],"synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"signal","type":"related"},{"name":"signal peptide","type":"exact"},{"name":"signal peptide coding sequence","type":"exact"}],"termid":"SO:0000418"}


id: PBO:0004791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.9","termid":"PBO:0004791"}


id: GO:0101002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Highly exocytosable gelatinase-poor granules found in neutrophils and rich in ficolin-1. Ficolin-1 is released from neutrophil granules by stimulation with fMLP or PMA, and the majority becomes associated with the surface membrane of the cells and can be detected by flow cytometry.","definition_xrefs":["PMID:19741154","GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"ficolin-1-rich granule","synonyms":[{"name":"ficolin granule","type":"related"},{"name":"ficolin-1 rich granule","type":"exact"}],"termid":"GO:0101002"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: PBO:0057441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 558","termid":"PBO:0057441"}


id: GO:0035658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions as a guanine nucleotide exchange factor (GEF) and converts Rab-GDP to Rab-GTP. In S. cerevisiae, this complex consists of at least Mon1 and Ccz1, and serves as a GEF for the Rab Ypt7p.","definition_xrefs":["PMID:20797862","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Mon1-Ccz1 complex","termid":"GO:0035658"}


id: FYPO:0003253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of one or more amino acids into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished amino acid import during vegetative growth","synonyms":[{"name":"abolished amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abolished amino acid import during mitotic cell cycle","type":"related"},{"name":"abolished amino acid import into cell","type":"exact"},{"name":"abolished amino acid uptake","type":"exact"},{"name":"amino acid import abolished","type":"exact"}],"termid":"FYPO:0003253"}


id: PBO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 2","termid":"PBO:0075250"}


id: PBO:0004499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A (predicted)","termid":"PBO:0004499"}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: GO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-cysteine amide by hydrolysis and oxidation of an interior Cys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0085"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-cysteine amidation (obsolete GO:0018038)","termid":"GO:0018038"}


id: SO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor gene cluster","type":"exact"},{"name":"vertebrate_immunoglobulin/T-cell receptor gene cluster","type":"exact"}],"termid":"SO:0000482"}


id: GO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036494"}


id: PBO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JRKL antisense RNA 1","termid":"PBO:0052033"}


id: GO:0008277
data:
  {"annotated_genes":["SJAG_01245","SJAG_02481","SJAG_02426","SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[87631,112469,88356,103875,96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of GPCR protein signaling pathway","type":"exact"},{"name":"regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0008277","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PBO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 48","termid":"PBO:0071442"}


id: GO:0102301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + gamma-linolenoyl-CoA + H+ = (8Z,11Z,14Z)-3-oxoicosa-8,11,14-trienoyl-CoA + coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"gamma-linolenate elongase activity","secondary_identifiers":["MetaCyc:RXN-12777"],"termid":"GO:0102301"}


id: PBO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_molecular_function","termid":"PBO:0031514"}


id: PBO:0065200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 pseudogene 1","termid":"PBO:0065200"}


id: FYPO:0008052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which the dimethylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0005225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during mitosis","termid":"FYPO:0008052"}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.7","RHEA:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0102","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN","KEGG_REACTION:R03630"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: GO:0033066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA recombinase mediator complex that contains the Rad51 paralogs RAD51B and RAD51C, or orthologs thereof.","definition_xrefs":["PMID:16093548","GOC:mah","PMID:17114795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Rad51B-Rad51C complex","synonyms":[{"name":"BC complex","type":"exact"}],"termid":"GO:0033066"}


id: GO:0072232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the S2 portion of the metanephric proximal convoluted tubule over time, from its formation to the mature structure. The S2 portion of the metanephric proximal tubule is involved in reabsorption of water and sodium chloride.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal convoluted tubule segment 2 development","termid":"GO:0072032"},{"relation_name":"part_of","term_name":"metanephric proximal convoluted tubule development","termid":"GO:0072229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal convoluted tubule segment 2 development","synonyms":[{"name":"metanephric S2 development","type":"exact"}],"termid":"GO:0072232"}


id: GO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + succinyl-CoA = CoA + H+ + succinate.","definition_xrefs":["EC:3.1.2.3","RHEA:11516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"succinyl-CoA hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00407","MetaCyc:SUCCINYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"succinyl coenzyme A deacylase activity","type":"related"},{"name":"succinyl coenzyme A hydrolase activity","type":"related"},{"name":"succinyl-CoA acylase activity","type":"related"}],"termid":"GO:0004778"}


id: FYPO:0000836
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115259,115261,115260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: increased","type":"related"}],"termid":"FYPO:0000836","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0003256"}


id: GO:0035888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoguanine + H2O = xanthine + NH3.","definition_xrefs":["PMID:21604715","EC:3.5.4.-","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"isoguanine deaminase activity","synonyms":[{"name":"2-hydroxyadenine deaminase activity","type":"exact"},{"name":"2-oxoadenine deaminase activity","type":"exact"}],"termid":"GO:0035888"}


id: PBO:0074427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 27","termid":"PBO:0074427"}


id: GO:0033955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which copies of the mitochondrial genome are distributed into daughter mitochondria upon mitochondrial fission.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA inheritance (obsolete GO:0033955)","synonyms":[{"name":"mitochondrial DNA segregation","type":"related"},{"name":"mitochondrial chromosome segregation","type":"related"}],"termid":"GO:0033955"}


id: GO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"regulation of EGF receptor activity","type":"exact"},{"name":"regulation of EGFR activity","type":"exact"},{"name":"regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007176"}


id: PBO:0081882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 830","termid":"PBO:0081882"}


id: PBO:0084311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; not required for isomaltose utilization, but Ima2p overexpression allows the ima1 null mutant to grow on isomaltose","termid":"PBO:0084311"}


id: PBO:0088921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5","termid":"PBO:0088921"}


id: PBO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1B","termid":"PBO:0043204"}


id: PBO:0086373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role; AAD15 has a paralog, AAD3, that arose from a segmental duplication; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086373"}


id: PBO:0109630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase (pseudogene)","termid":"PBO:0109630"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: PBO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter (predicted)","termid":"PBO:0008038"}


id: GO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2R)-3-phosphoglycerate + 2 H+ = CO2 + D-ribulose 1,5-bisphosphate + H2O.","definition_xrefs":["RHEA:23124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribulose-bisphosphate carboxylase activity","secondary_identifiers":["EC:4.1.1.39","MetaCyc:RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN"],"synonyms":[{"name":"D-ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"D-ribulose-1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"RuBP carboxylase activity","type":"exact"},{"name":"RuBisCO activity","type":"exact"},{"name":"carboxydismutase activity","type":"related"},{"name":"diphosphoribulose carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase/oxygenase activity","type":"exact"}],"termid":"GO:0016984"}


id: GO:1905844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to gamma radiation.","definition_xrefs":["GO_REF:0000058","PMID:23505386","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to gamma radiation","termid":"GO:1905843"},{"relation_name":"is_a","term_name":"negative regulation of response to gamma radiation","termid":"GO:2001229"},{"relation_name":"negatively_regulates","term_name":"cellular response to gamma radiation","termid":"GO:0071480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to gamma radiation","synonyms":[{"name":"down regulation of cellular response to gamma radiation","type":"exact"},{"name":"down regulation of cellular response to gamma ray","type":"related"},{"name":"down regulation of cellular response to gamma-ray photon","type":"related"},{"name":"down-regulation of cellular response to gamma radiation","type":"exact"},{"name":"down-regulation of cellular response to gamma ray","type":"related"},{"name":"down-regulation of cellular response to gamma-ray photon","type":"related"},{"name":"downregulation of cellular response to gamma radiation","type":"exact"},{"name":"downregulation of cellular response to gamma ray","type":"related"},{"name":"downregulation of cellular response to gamma-ray photon","type":"related"},{"name":"inhibition of cellular response to gamma radiation","type":"narrow"},{"name":"inhibition of cellular response to gamma ray","type":"related"},{"name":"inhibition of cellular response to gamma-ray photon","type":"related"},{"name":"negative regulation of cellular response to gamma ray","type":"related"},{"name":"negative regulation of cellular response to gamma-ray photon","type":"related"}],"termid":"GO:1905844"}


id: PBO:0058251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4538","termid":"PBO:0058251"}


id: PBO:0068598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 49, pseudogene","termid":"PBO:0068598"}


id: PBO:0088430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim16","termid":"PBO:0088430"}


id: PBO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_lysine_level","termid":"PBO:0030591"}


id: GO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,6-tetrakisphosphate + H2O = inositol-3,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855159"],"termid":"GO:0052831"}


id: PBO:0077904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase pseudogene 2","termid":"PBO:0077904"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: PBO:0059901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 24","termid":"PBO:0059901"}


id: GO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process, catalyzed by subunits of nonribosomal peptide synthase. The amino acid is adenylated at its carboxylate group (ATP-dependent) then transferred to the thiol group of an enzyme-bound phosphopantetheine cofactor.","definition_xrefs":["PMID:9250661","GOC:jl","PMID:9712910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid adenylylation by nonribosomal peptide synthase","synonyms":[{"name":"amino acid adenylation by NRPS","type":"exact"},{"name":"amino acid adenylation by nonribosomal peptide synthase","type":"exact"}],"termid":"GO:0043042"}


id: PBO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Z member 1","termid":"PBO:0062062"}


id: SO:1000042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant where a monocentric element is caused by the fusion of two chromosome arms.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound_chromosome","synonyms":[{"name":"compound chromosome","type":"exact"}],"termid":"SO:1000042"}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_01209","SJAG_02178","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104820,110495,114577],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: GO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"kynurenine metabolic process","termid":"GO:0070189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"tryptophan catabolic process to kynurenine","secondary_identifiers":["MetaCyc:TRPKYNCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to kynurenine","type":"exact"},{"name":"tryptophan degradation to kynurenine","type":"exact"}],"termid":"GO:0019441"}


id: GO:0141085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141085"}


id: GO:0033309
data:
  {"annotated_genes":["SJAG_03845","SJAG_00693","SJAG_00987","SJAG_02810"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88904,105101,107897,108070],"is_not":false,"summary":null,"term":"GO:0033309"}]},"cv_name":"cellular_component","definition":"A protein complex that binds to the Swi4/6 cell cycle box (SCB) promoter element, consensus sequence CRCGAAA, and activates transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Swi4p and the activator Swi6p, and is associated with additional proteins known as Whi5p and Msa1p.","definition_xrefs":["GOC:mah","PMID:18160399","PMID:15838511","PMID:7917338","PMID:11206552","PMID:19150335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00693":null,"SJAG_00987":null,"SJAG_02810":null,"SJAG_03845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"SBF transcription complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SBF complex","type":"exact"}],"termid":"GO:0033309","terms_by_termid":{"GO:0033309":null}}


id: GO:0061041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of wound healing","termid":"GO:0061041"}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


id: GO:1901693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["PMID:12021768","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"},{"relation_name":"negatively_regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye retinal cell apoptotic process","synonyms":[{"name":"down regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"down-regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"downregulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"inhibition of compound eye retinal cell apoptotic process","type":"narrow"}],"termid":"GO:1901693"}


id: GO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generation of neurons","synonyms":[{"name":"neuron generation","type":"exact"}],"termid":"GO:0048699"}


id: GO:0062236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an ionocyte. Ionocytes are specialized epithelial cells that contribute to osmotic homeostasis.","definition_xrefs":["PMID:17555741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ionocyte differentiation","termid":"GO:0062236"}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23555824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: PBO:0066369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 12","termid":"PBO:0066369"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: PBO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 1","termid":"PBO:0075309"}


id: GO:0031873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 proteinase activated receptor binding","synonyms":[{"name":"type 2 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031873"}


id: PBO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level, annotation_extension=during(GO:0000090)","termid":"PBO:0031900"}


id: FYPO:0004674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to dimethyl sulfoxide. Cells stop growing (and may die) at a concentration of dimethyl sulfoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to dimethyl sulfoxide","synonyms":[{"name":"hypersensitive to dimethyl sulfoxide","type":"exact"},{"name":"sensitive to DMSO","type":"exact"},{"name":"sensitive to dimethyl sulfoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to dimethyl sulfoxide during vegetative growth","type":"exact"},{"name":"sensitive to dimethyl sulphoxide","type":"exact"}],"termid":"FYPO:0004674"}


id: PBO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 26","termid":"PBO:0060587"}


id: PBO:0086420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from 60S subunits in the cytoplasm","termid":"PBO:0086420"}


id: MOD:00723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to either N2-acetyl-L-lysine, or N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetylated L-lysine","synonyms":[{"name":"NAcLys","type":"exact"}],"termid":"MOD:00723"}


id: GO:0048742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:sm","GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle fiber development","synonyms":[{"name":"regulation of skeletal muscle fibre development","type":"exact"},{"name":"regulation of skeletal myofiber development","type":"exact"},{"name":"regulation of skeletal myofibre development","type":"exact"}],"termid":"GO:0048742"}


id: PBO:0064983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich acidic protein 1","termid":"PBO:0064983"}


id: PBO:0066086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0066086"}


id: GO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine biosynthetic process","synonyms":[{"name":"phosphocreatine anabolism","type":"exact"},{"name":"phosphocreatine biosynthesis","type":"exact"},{"name":"phosphocreatine formation","type":"exact"},{"name":"phosphocreatine synthesis","type":"exact"}],"termid":"GO:0046314"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["PubMed:23030644","RESID:AA0607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: GO:0006481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the C-terminal amino acid of a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein methylation","synonyms":[{"name":"C-terminal protein amino acid methylation","type":"exact"}],"termid":"GO:0006481"}


id: PBO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase (predicted)","termid":"PBO:0001508"}


id: FYPO:0002313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular ergosterol level","termid":"FYPO:0002321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"ergosterol absent from cell","synonyms":[{"name":"ergosterol absent from cell during mitotic cell cycle","type":"related"},{"name":"ergosterol absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002313"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111592],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PATO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinodromous","termid":"PATO:0001967"}


id: GO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of centrosome cycle","synonyms":[{"name":"down regulation of centrosome cycle","type":"exact"},{"name":"down-regulation of centrosome cycle","type":"exact"},{"name":"downregulation of centrosome cycle","type":"exact"},{"name":"inhibition of centrosome cycle","type":"narrow"}],"termid":"GO:0046606"}


id: PBO:0087303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI complex-associated protein; involved in 3'-5' degradation of long 3'UTR-containing mRNA, poorly translated mRNA, and other RNA regions devoid of ribosomes; proposed to assist the cytoplasmic exosome in a Ska1-SKI complex when a direct interaction between the ribosome and the SKI complex is absent","termid":"PBO:0087303"}


id: PATO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bend or hang downwards due to loss of water","direct_ancestors":[{"relation_name":"is_a","term_name":"drooping","termid":"PATO:0002165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wilty","termid":"PATO:0002461"}


id: GO:0047227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1L-1-O-(indol-3-yl)acetyl-myo-inositol + UDP-D-galactose = 5-O-(indol-3-ylacetyl)-myo-inositol D-galactoside + H+ + UDP.","definition_xrefs":["RHEA:21148","EC:2.4.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"indolylacetyl-myo-inositol galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.156-RXN","KEGG_REACTION:R04334"],"synonyms":[{"name":"UDP-galactose:(indol-3-yl)acetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:indol-3-ylacetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"indol-3-ylacetyl-myo-inositol galactoside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-indolylacetylinositol galactosyltransferase activity","type":"related"}],"termid":"GO:0047227"}


id: GO:1990173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nucleoplasm.","definition_xrefs":["PMID:22918952","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleoplasm","secondary_identifiers":["GO:0032066"],"synonyms":[{"name":"nucleolus to nucleoplasm transport","type":"related"},{"name":"protein localisation to nucleoplasm","type":"exact"}],"termid":"GO:1990173"}


id: GO:0030884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exogenous lipid antigen (examples include microbial lipids and glycolipids).","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid antigen binding","termid":"GO:0030882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"exogenous lipid antigen binding","termid":"GO:0030884"}


id: PBO:0070192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 113 pseudogene","termid":"PBO:0070192"}


id: PBO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (predicted)","termid":"PBO:0005827"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: GO:0045474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of an insect (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ether stimulus.","definition_xrefs":["GOC:jid","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to ether (sensu Insecta) (obsolete GO:0045474)","synonyms":[{"name":"response to ether (sensu Insecta)","type":"exact"}],"termid":"GO:0045474"}


id: PBO:0064921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3C","termid":"PBO:0064921"}


id: PBO:0027399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_triglyceride_biosynthetic_process","termid":"PBO:0027399"}


id: FYPO:0000831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of actinomycin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to actinomycin D","synonyms":[{"name":"resistance to actinomycin D during mitotic cell cycle","type":"related"},{"name":"resistance to actinomycin D during vegetative growth","type":"exact"},{"name":"resistant to actinomycin D","type":"exact"}],"termid":"FYPO:0000831"}


id: PR:O74891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ret3 gene.","definition_xrefs":["UniProtKB:O74891","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.07","synonyms":[{"name":"Spom972h-ret3","type":"exact"},{"name":"zeta-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"zeta-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74891"}


id: PBO:0066749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 47","termid":"PBO:0066749"}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: GO:0000910
data:
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ames":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[103860],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031991"},{"annotations":[115643,90006],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[85471,85514,82991,99316,113605,114779,112770,105135,111529,85317],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[107337,83317,97166],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[113981],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111897],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"The division of the cytoplasm and the plasma membrane of a cell and its partitioning into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell 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id: PBO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.3.5","termid":"PBO:0000958"}


id: PBO:0060851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 2","termid":"PBO:0060851"}


id: GO:0000015
data:
  {"annotated_genes":["SJAG_02107","SJAG_00461","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101296,101297,101298],"is_not":false,"summary":null,"term":"GO:0000015"}]},"cv_name":"cellular_component","definition":"A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phosphopyruvate hydratase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"enolase complex","type":"exact"}],"termid":"GO:0000015","terms_by_termid":{"GO:0000015":null}}


id: PBO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jrk helix-turn-helix protein","termid":"PBO:0052031"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:19730411","GOC:BHF","GOC:sjp","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: GO:0003089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","termid":"GO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating epinephrine-norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating adrenaline-noradrenaline","type":"exact"},{"name":"increased force of heart contraction by circulating epinephrine-norepinephrine","type":"exact"},{"name":"increased force of heart contraction by epinephrine-norepinephrine in the blood stream","type":"exact"},{"name":"positive regulation of heart contraction by circulating adrenaline-noradrenaline","type":"related"},{"name":"positive regulation of heart contraction by circulating epinephrine-norepinephrine","type":"related"}],"termid":"GO:0003089"}


id: GO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"negative regulation of CCL4 production","type":"exact"},{"name":"negative regulation of MIP-1b production","type":"exact"},{"name":"negative regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071644"}


id: FYPO:0002842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromere outer repeat","synonyms":[{"name":"decreased protein localisation to centromere outer repeat","type":"exact"},{"name":"decreased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to pericentric region","type":"related"},{"name":"decreased protein localization to pericentromeric region","type":"related"},{"name":"reduced protein localization to centromere outer repeat","type":"exact"}],"termid":"FYPO:0002842"}


id: GO:0004679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of AMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0003674","GO:0140096","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"AMP-activated protein kinase activity","secondary_identifiers":["Reactome:R-HSA-447074","Reactome:R-HSA-163691","Reactome:R-HSA-5673768","Reactome:R-HSA-380927","Reactome:R-HSA-1592244","EC:2.7.11.11","Reactome:R-HSA-200423","Reactome:R-HSA-6805470"],"synonyms":[{"name":"5'-AMP-activated protein kinase activity","type":"exact"},{"name":"AMPK activity","type":"related"},{"name":"SNF1A/AMP-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004679"}


id: PBO:0013837
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Choline Transporter-Like","termid":"PBO:0013837"}


id: GO:0005791
data:
  {"annotated_genes":["SJAG_00175","SJAG_01558","SJAG_00360","SJAG_02330","SJAG_03955","SJAG_02208","SJAG_00959","SJAG_00064","SJAG_02588","SJAG_02354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102036,93763,104219,105263],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[86098,91411,106343,105561],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[89906,105687],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[93764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01558":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"rough endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Endoplasmic_reticulum#Rough_endoplasmic_reticulum","NIF_Subcellular:sao1881364067"],"synonyms":[{"name":"RER","type":"exact"},{"name":"rough ER","type":"exact"}],"termid":"GO:0005791","terms_by_termid":{"GO:0005784":null,"GO:0005785":null,"GO:0031207":null,"GO:0071261":null}}


id: GO:1905104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ouabain stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23643758","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to ouabain (obsolete GO:1905104)","termid":"GO:1905104"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: PBO:0031517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_binding","termid":"PBO:0031517"}


id: PBO:0085481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable multiple transmembrane protein; involved in diploid invasive and pseudohyphal growth upon nitrogen starvation; is glycosylated and phosphorylated; interacts with Rim21p and Rim9p in the plasma membrane to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; required for accumulation of processed Rim101p","termid":"PBO:0085481"}


id: GO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that inhibits protein phosphatase activity by directly binding to a protein phosphatase.","definition_xrefs":["PMID:19407142","PMID:19933100","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase inhibitor complex","termid":"GO:0062049"}


id: GO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a neutrophil from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000775","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil extravasation","termid":"GO:0072672"}


id: GO:0110089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"}


id: GO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the posterior semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior semicircular canal development","termid":"GO:0060874"}


id: GO:1904610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23196670","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"response to PCB 126","type":"exact"}],"termid":"GO:1904610"}


id: PBO:0040707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 12 pseudogene 1","termid":"PBO:0040707"}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: GO:0018860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + anthranilate + CoA = AMP + diphosphate + anthranilyl-CoA.","definition_xrefs":["EC:6.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"anthranilate-CoA ligase activity","secondary_identifiers":["UM-BBD_reactionID:r0341","KEGG_REACTION:R00982","MetaCyc:AMINOBENZCOALIG-RXN","RHEA:10828"],"synonyms":[{"name":"2-aminobenzoate coenzyme A ligase activity","type":"related"},{"name":"2-aminobenzoate-CoA ligase activity","type":"related"},{"name":"2-aminobenzoate-coenzyme A ligase activity","type":"related"},{"name":"anthranilate--CoA ligase activity","type":"exact"},{"name":"anthranilate:CoA ligase (AMP-forming)","type":"related"},{"name":"anthraniloyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018860"}


id: PBO:0062796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL1 pseudogene 1","termid":"PBO:0062796"}


id: PBO:0004660
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA Interacting Protein","termid":"PBO:0004660"}


id: PBO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein 1, Bdc1","termid":"PBO:0004055"}


id: PBO:0074726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 81","termid":"PBO:0074726"}


id: PBO:0073256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN7 divergent transcript","termid":"PBO:0073256"}


id: PBO:0014280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm12","termid":"PBO:0014280"}


id: PBO:0058934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18A antisense RNA 1","termid":"PBO:0058934"}


id: PATO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return.","definition_xrefs":["www.answers.com:www.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"passive","termid":"PATO:0000764"}


id: PBO:0067737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 36","termid":"PBO:0067737"}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:11445442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0140677","GO:0005515","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: PBO:0029358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dGTP_level","termid":"PBO:0029358"}


id: PBO:0073472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan beta","termid":"PBO:0073472"}


id: PBO:0082380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 1 subunit of the 20S proteasome; responsible for cleavage after acidic residues in peptides","termid":"PBO:0082380"}


id: GO:0047396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol = 1,2-diacyl-sn-glycerol + 6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate.","definition_xrefs":["EC:4.6.1.14","MetaCyc:3.1.4.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycosylphosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:14333"],"synonyms":[{"name":"(glycosyl)phosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase [6-(alpha-D-glucosaminyl)-1D-myo-inositol 1,2-cyclic phosphate-forming]","type":"related"},{"name":"6-(alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming) activity","type":"related"},{"name":"GPI-PLC activity","type":"related"},{"name":"GPI-specific phospholipase C activity","type":"related"},{"name":"VSG-lipase activity","type":"related"},{"name":"glycosyl inositol phospholipid anchor-hydrolyzing enzyme activity","type":"related"},{"name":"glycosylphosphatidylinositol-phospholipase C activity","type":"narrow"},{"name":"glycosylphosphatidylinositol-specific phospholipase C activity","type":"related"},{"name":"variant-surface-glycoprotein phospholipase C activity","type":"exact"}],"termid":"GO:0047396"}


id: PBO:0069518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 787, pseudogene","termid":"PBO:0069518"}


id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: PBO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_aseptate_vegetative_cell","termid":"PBO:0030786"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: GO:0010814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the neuropeptide substance P.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide catabolic process","termid":"GO:0010813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"substance P catabolic process","termid":"GO:0010814"}


id: PBO:0074793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12B","termid":"PBO:0074793"}


id: PBO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144A","termid":"PBO:0042074"}


id: GO:0103061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(4-) + H2O + a trans-methoxy-C60-meroacyl-[acp] = diphosphoric acid + a trans-methoxy-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz","PMID:15042094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"trans-methoxy-C60-meroacyl-AMP ligase activity","secondary_identifiers":["MetaCyc:RXN1G-4141"],"termid":"GO:0103061"}


id: GO:0106245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-1-phosphatidylethanolamine + L-serine = L-1-phosphatidylserine + ethanolamine.","definition_xrefs":["PMID:19014349","RHEA:27606","PMID:31869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"L-serine-phosphatidylethanolamine phosphatidyltransferase activity","secondary_identifiers":["EC:2.7.8.29"],"termid":"GO:0106245"}


id: PATO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female sterile","termid":"PATO:0000892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovariectomized female","termid":"PATO:0002380"}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: PBO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035760"}


id: PBO:0086524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR209W is not an essential gene","termid":"PBO:0086524"}


id: GO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hyperoxia","synonyms":[{"name":"response to hyperoxic stress","type":"exact"},{"name":"response to increased oxygen tension","type":"exact"}],"termid":"GO:0055093"}


id: PBO:0039972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 3","termid":"PBO:0039972"}


id: PBO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 31","termid":"PBO:0070532"}


id: PBO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 74","termid":"PBO:0042858"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["PMID:2557057","GOC:vk","GOC:BHF","PMID:6218174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0027002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_sporulation","termid":"PBO:0027002"}


id: PBO:0083159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A","termid":"PBO:0083159"}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: PBO:0040690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 2","termid":"PBO:0040690"}


id: GO:0110038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode male tail tip morphogenesis","termid":"GO:0110038"}


id: PBO:0039877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 33","termid":"PBO:0039877"}


id: PBO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 1","termid":"PBO:0051732"}


id: PBO:0057742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1537","termid":"PBO:0057742"}


id: PBO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035790"}


id: PBO:0058187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4480","termid":"PBO:0058187"}


id: PBO:0085610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in directionality of mating type switching; acts with Fkh1p to control which donor mating-type locus is inserted into MAT locus during mating type switching; localized to the nucleus; not an essential gene","termid":"PBO:0085610"}


id: GO:0030618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that is phosphorylated by a TGFbeta receptor and complexes with a common-partner mediator. The- heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity (obsolete GO:0030618)","synonyms":[{"name":"TGF-beta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"pathway restricted SMAD protein","type":"related"},{"name":"pathway-restricted SMAD protein","type":"related"},{"name":"pathway-specific SMAD protein","type":"related"},{"name":"receptor regulated SMAD protein","type":"related"},{"name":"receptor-regulated SMAD protein","type":"related"}],"termid":"GO:0030618"}


id: PR:P87144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonyl-tRNA synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.02","secondary_identifiers":["UniProtKB:P87144"],"synonyms":[{"name":"Spom972h-thrS","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87144"}


id: PBO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 1","termid":"PBO:0042417"}


id: FYPO:0003071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a single-stranded DNA 5'-3' exodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished single-stranded DNA 5'-3' exodeoxyribonuclease activity","synonyms":[{"name":"single-stranded DNA 5'-3' exodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0003071"}


id: PBO:0074396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 6","termid":"PBO:0074396"}


id: PBO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 17 pseudogene","termid":"PBO:0062086"}


id: GO:1903281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","GOC:mtg_cardiac_conduct_nov11","PMID:19683723","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of calcium:sodium antiporter activity","termid":"GO:1903279"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium:sodium antiporter activity","synonyms":[{"name":"activation of calcium:sodium antiporter activity","type":"narrow"},{"name":"activation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"activation of sodium/calcium exchanger","type":"narrow"},{"name":"activation of sodium:calcium exchange","type":"related"},{"name":"positive regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"positive regulation of sodium/calcium exchanger","type":"exact"},{"name":"positive regulation of sodium:calcium exchange","type":"related"},{"name":"up regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up regulation of sodium/calcium exchanger","type":"exact"},{"name":"up regulation of sodium:calcium exchange","type":"related"},{"name":"up-regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up-regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up-regulation of sodium/calcium exchanger","type":"exact"},{"name":"up-regulation of sodium:calcium exchange","type":"related"},{"name":"upregulation of calcium:sodium antiporter activity","type":"exact"},{"name":"upregulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"upregulation of sodium/calcium exchanger","type":"exact"},{"name":"upregulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903281"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: FYPO:0005838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to each side of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"symmetric mitochondrial aggregation","synonyms":[{"name":"bipolar intracellular mitochondrion distribution","type":"related"},{"name":"bipolar intracellular mitochondrion localisation","type":"related"},{"name":"bipolar intracellular mitochondrion localization","type":"related"},{"name":"bipolar mitochondrial aggregation","type":"related"},{"name":"bipolar mitochondrion distribution","type":"related"},{"name":"symmetric mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"symmetric mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0005838"}


id: PBO:0065961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 3","termid":"PBO:0065961"}


id: SO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which Bacteriophage RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_promoter","termid":"SO:0002311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phage_RNA_Polymerase_Promoter","synonyms":[{"name":"Phage RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001204"}


id: PATO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual whose sex is unknown.","definition_xrefs":["MGED:MGED"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001336 unknown sex (obsolete PATO:0001336)","termid":"PATO:0001336"}


id: PBO:0089665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Sbp1","termid":"PBO:0089665"}


id: PR:Q92339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght3 gene.","definition_xrefs":["UniProtKB:Q92339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity gluconate transporter ght3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.01","synonyms":[{"name":"Spom972h-ght3","type":"exact"},{"name":"hexose transporter 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92339"}


id: FYPO:0002851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the eisosome is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to eisosome","synonyms":[{"name":"ectopic protein localization to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome during vegetative growth","type":"exact"},{"name":"protein mislocalized to eisosome during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to eisosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002851"}


id: PBO:0055665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 2","termid":"PBO:0055665"}


id: PBO:0054317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1709","termid":"PBO:0054317"}


id: PBO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.42","termid":"PBO:0003190"}


id: GO:0141046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of an Atg8 family modifer from one protein to a phosphatidylethanolamine or phosphatidylserine on a membrane, via the reaction X-Atg8 + Y = Y-Atg8 + X.","definition_xrefs":["PMID:17986448","PMID:18704115","PMID:28234446","PMID:33909989","PMID:11100732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0019787","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"Atg8-family conjugating enzyme activity","synonyms":[{"name":"APG8 conjugating enzyme activity","type":"exact"},{"name":"Atg8 conjugating enzyme activity","type":"narrow"},{"name":"Atg8-like conjugating activity","type":"exact"},{"name":"E2","type":"broad"}],"termid":"GO:0141046"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: PBO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rvb1","termid":"PBO:0002756"}


id: FYPO:0000451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"},{"relation_name":"is_a","term_name":"increased protein localization to centromere","termid":"FYPO:0006239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromere during vegetative growth","synonyms":[{"name":"increased protein localisation to centromere during vegetative growth","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"increased protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region during vegetative growth","type":"exact"}],"termid":"FYPO:0000451"}


id: SO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcript_stability_variant","synonyms":[{"name":"increased transcript stability variant","type":"exact"}],"termid":"SO:0001548"}


id: PBO:0027944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_segregation","termid":"PBO:0027944"}


id: PBO:0017847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, implicated in calcium transport","termid":"PBO:0017847"}


id: PBO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 15","termid":"PBO:0062172"}


id: PBO:0050948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 22, pseudogene","termid":"PBO:0050948"}


id: GO:0033179
data:
  {"annotated_genes":["SJAG_00516","SJAG_01913","SJAG_05294","SJAG_02782","SJAG_03406","SJAG_02023"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85346,85673,87594,91327,95679,99743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033179","terms_by_termid":{"GO:0000220":null}}


id: GO:0050560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Asx) + L-aspartate + ATP = aspartyl-tRNA(Asx) + diphosphate + AMP.","definition_xrefs":["EC:6.1.1.23","MetaCyc:6.1.1.23-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0003674","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"aspartate-tRNA(Asn) ligase activity","secondary_identifiers":["RHEA:18349"],"synonyms":[{"name":"L-aspartate:tRNAAsx ligase (AMP-forming)","type":"related"},{"name":"aspartate-tRNAAsn ligase activity","type":"exact"},{"name":"nondiscriminating aspartyl-tRNA synthetase activity","type":"related"}],"termid":"GO:0050560"}


id: PR:G2TRS9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC337.02c gene.","definition_xrefs":["UniProtKB:G2TRS9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein C337.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.02c","synonyms":[{"name":"Spom972h-SPBC337.02c","type":"exact"}],"termid":"PR:G2TRS9"}


id: PBO:0041993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 39","termid":"PBO:0041993"}


id: PATO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's relative inability of electromagnetism to pass through a particular material, particularly X-rays.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiopacity","termid":"PATO:0002136"}


id: GO:0141034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that disrupts the host actin cytoskeleton by inhibiting host actin from polymerizing. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30297616","PMID:24253566","PMID:23409096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via inhibition of actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via inhibition of actin polymerization","type":"exact"}],"termid":"GO:0141034"}


id: PATO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being slightly out of its usual or proper place, or position.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dislocated","termid":"PATO:0001852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially dislocated","secondary_identifiers":["PATO:0002160"],"synonyms":[{"name":"partial dislocated towards","type":"exact"},{"name":"subluxation","type":"exact"},{"name":"suluxated towards","type":"exact"}],"termid":"PATO:0002157"}


id: PBO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX5 pseudogene 1","termid":"PBO:0052614"}


id: PBO:0090840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like","termid":"PBO:0090840"}


id: GO:0036455
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113946],"is_not":false,"summary":null,"term":"GO:0036455"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a iron-sulfur cluster from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"iron-sulfur transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564828"],"synonyms":[{"name":"Fe-S transferase activity","type":"exact"}],"termid":"GO:0036455","terms_by_termid":{"GO:0036455":null}}


id: GO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol + all-trans-undecaprenyl phosphate + ADP + H+.","definition_xrefs":["RHEA:23752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenol kinase activity","termid":"GO:0009038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans undecaprenol kinase activity","termid":"GO:0036432"}


id: PBO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member A","termid":"PBO:0047215"}


id: PBO:0053682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 869","termid":"PBO:0053682"}


id: PBO:0065721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA, SNRPN neighbor","termid":"PBO:0065721"}


id: PBO:0034273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts","termid":"PBO:0034273"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:pr","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: GO:0097652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phosphatidylinositol 3-kinase complex that contains a catalytic subunit of a phosphatidylinositol 3-kinase (PI3K) enzyme and one or more adaptor proteins. There is no known obligatory regulatory subunit. The class II PI3K (PI3KC2) subfamily of genes has members in vertebrates, worm and fly, but none in yeast.","definition_xrefs":["PMID:24587488","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex","termid":"GO:0005942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class II","synonyms":[{"name":"class II PI3K complex","type":"exact"},{"name":"class II phosphatidylinositol 3-kinase complex","type":"exact"}],"termid":"GO:0097652"}


id: FYPO:0006712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular acetyl-CoA level","synonyms":[{"name":"decreased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular acetyl-CoA level during vegetative growth","type":"exact"},{"name":"reduced cellular acetyl-CoA level","type":"exact"}],"termid":"FYPO:0006712"}


id: GO:0003852
data:
  {"annotated_genes":["SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106013],"is_not":false,"summary":null,"term":"GO:0003852"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + acetyl-CoA + H2O = (2S)-2-isopropylmalate + CoA + H+.","definition_xrefs":["RHEA:21524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-isopropylmalate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2-ISOPROPYLMALATESYN-RXN","EC:2.3.3.13","KEGG_REACTION:R01213"],"synonyms":[{"name":"3-carboxy-3-hydroxy-4-methylpentanoate 3-methyl-2-oxobutanoate-lyase (CoA-acetylating) activity","type":"related"},{"name":"acetyl-CoA:3-methyl-2-oxobutanoate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"alpha-IPM synthetase activity","type":"related"},{"name":"alpha-isopropylmalate synthase activity","type":"related"},{"name":"alpha-isopropylmalate synthetase activity","type":"related"},{"name":"alpha-isopropylmalic synthetase activity","type":"related"},{"name":"isopropylmalate synthase activity","type":"related"},{"name":"isopropylmalate synthetase activity","type":"related"}],"termid":"GO:0003852","terms_by_termid":{"GO:0003852":null}}


id: GO:1901161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound catabolic process","synonyms":[{"name":"primary amino compound breakdown","type":"exact"},{"name":"primary amino compound catabolism","type":"exact"},{"name":"primary amino compound degradation","type":"exact"}],"termid":"GO:1901161"}


id: PBO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 26","termid":"PBO:0048075"}


id: FYPO:0003150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005568","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased NETO","synonyms":[{"name":"decreased NETO during mitotic cell cycle","type":"related"},{"name":"decreased NETO during vegetative growth","type":"exact"},{"name":"decreased activation of bipolar cell growth","type":"related"},{"name":"decreased cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"decreased new end take-off","type":"exact"},{"name":"decreased switch from monopolar to bipolar cell growth","type":"exact"},{"name":"reduced NETO","type":"exact"}],"termid":"FYPO:0003150"}


id: GO:0006049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine catabolic process","synonyms":[{"name":"UDP-N-acetylglucosamine breakdown","type":"exact"},{"name":"UDP-N-acetylglucosamine catabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006049"}


id: PBO:0041057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 8","termid":"PBO:0041057"}


id: FYPO:0004538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"microtubules present in increased numbers","synonyms":[{"name":"increased level of MTs","type":"exact"},{"name":"microtubules present in greater numbers","type":"exact"},{"name":"microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004538"}


id: GO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["GOC:BHF","CL:0000236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"},{"relation_name":"is_a","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis across high endothelial venule","synonyms":[{"name":"B-cell chemotaxis across high endothelial venule","type":"exact"}],"termid":"GO:0035769"}


id: PBO:0053418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 358","termid":"PBO:0053418"}


id: GO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directed cell movement in the neural plate resulting in tissue elongation via intercalation of adjacent cells in an epithelial sheet at the midline, leading to narrowing and lengthening of the neural plate.","definition_xrefs":["PMID:15806586","GO_REF:0000021","GOC:cls","GOC:dph","PMID:13679871","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}


id: PBO:0068676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 57, pseudogene","termid":"PBO:0068676"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: PBO:0056867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 3","termid":"PBO:0056867"}


id: FYPO:0004276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of negative regulation of transcription is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during G0","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during G0","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal negative regulation of transcription during cell quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription during quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during G0","type":"exact"}],"termid":"FYPO:0004276"}


id: PBO:0075283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 24","termid":"PBO:0075283"}


id: PBO:0061414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide W","termid":"PBO:0061414"}


id: PBO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B pseudogene 1","termid":"PBO:0042019"}


id: GO:0097207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a bud. Bud dormancy is a suspension of most physiological activity and growth that can be reactivated. It may be a response to environmental conditions such as seasonality or extreme heat, drought, or cold. The exit from bud dormancy is marked by the resumed growth of the bud.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dormancy process","synonyms":[{"name":"bud dormancy","type":"related"}],"termid":"GO:0097207"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: PBO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 7 like","termid":"PBO:0042470"}


id: GO:1901367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-cysteine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-cysteine","termid":"GO:1901367"}


id: PBO:0065342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periaxin","termid":"PBO:0065342"}


id: PBO:0051957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR3 antisense RNA 1","termid":"PBO:0051957"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: PBO:0068578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 29, pseudogene","termid":"PBO:0068578"}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah","PMID:34019809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: PBO:0042774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP83 divergent transcript","termid":"PBO:0042774"}


id: PBO:0004471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family protein, human SRFS2 ortholog Srp1","termid":"PBO:0004471"}


id: PBO:0075515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPCS3 antisense RNA 1","termid":"PBO:0075515"}


id: FYPO:0004322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a smaller portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:vw","PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"decreased extent of CENP-A containing nucleosome","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of CENP-A deposition","type":"related"},{"name":"decreased spatial extent of CENP-A loading","type":"related"},{"name":"decreased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"decreased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced spatial extent of CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0004322"}


id: PBO:0090810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Meikin ortholog, syntenic position","termid":"PBO:0090810"}


id: PBO:0029405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029405"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["GO_REF:0000068","GOC:kmv","GOC:TermGenie","PMID:25775534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"ascaroside metabolic process","termid":"GO:1904069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: PBO:0056754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 6, methylcytidine","termid":"PBO:0056754"}


id: GO:0044233
data:
  {"annotated_genes":["SJAG_01305","SJAG_03416","SJAG_01929","SJAG_04370","SJAG_03710"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103409,101709,86428,103544,112701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A zone of apposition between endoplasmic-reticulum and mitochondrial membranes, structured by bridging complexes. These contact sites are thought to facilitate inter-organelle calcium and phospholipid exchange.","definition_xrefs":["PMID:29684109","PMID:19556461","GOC:jl","PMID:22078959","PMID:29626751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondria-associated endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane contact site","type":"exact"},{"name":"MAM","type":"related"},{"name":"endoplasmic reticulum-mitochondrion membrane contact site","type":"exact"},{"name":"mitochondria-associated ER membrane","type":"exact"},{"name":"mitochondria-associated membrane","type":"exact"},{"name":"mitochondria-endoplasmic reticulum (ER) contact","type":"exact"}],"termid":"GO:0044233","terms_by_termid":{"GO:0032865":null}}


id: FYPO:0000883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000883"}


id: GO:0048499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.","definition_xrefs":["GOC:mah","PMID:10620806","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle membrane organization","synonyms":[{"name":"SLMV biogenesis","type":"narrow"},{"name":"synaptic vesicle membrane organisation","type":"exact"},{"name":"synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:0048499"}


id: PBO:0081691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 613","termid":"PBO:0081691"}


id: PATO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001000 relative alternation (obsolete PATO:0001000)","termid":"PATO:0001000"}


id: PBO:0029723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nocodazole","termid":"PBO:0029723"}


id: PBO:0087958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein; subunit of the glycosylphosphatidylinositol transamidase complex that adds GPIs to newly synthesized proteins; human PIG-S homolog","termid":"PBO:0087958"}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: GO:1900478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:7891681","GOC:dgf","PMID:7601277","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900478)","synonyms":[{"name":"activation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900478"}


id: GO:1904890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of excitatory synapse assembly","synonyms":[{"name":"down regulation of excitatory synapse assembly","type":"exact"},{"name":"down regulation of excitatory synapse formation","type":"exact"},{"name":"down-regulation of excitatory synapse assembly","type":"exact"},{"name":"down-regulation of excitatory synapse formation","type":"exact"},{"name":"downregulation of excitatory synapse assembly","type":"exact"},{"name":"downregulation of excitatory synapse formation","type":"exact"},{"name":"inhibition of excitatory synapse assembly","type":"narrow"},{"name":"inhibition of excitatory synapse formation","type":"narrow"},{"name":"negative regulation of excitatory synapse formation","type":"exact"}],"termid":"GO:1904890"}


id: PBO:0078966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 5-1","termid":"PBO:0078966"}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: PBO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16 (predicted)","termid":"PBO:0011090"}


id: PBO:0077649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 1","termid":"PBO:0077649"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: GO:0097315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["GOC:di","PMID:21700702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"}


id: PBO:0055236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2663","termid":"PBO:0055236"}


id: MOD:01408
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazoline-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK (4S)-thiazoline-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine (4S)-thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01408"}


id: PBO:0077415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150C","termid":"PBO:0077415"}


id: GO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052504)","synonyms":[{"name":"induction by organism of defense-related papilla formation in symbiont","type":"narrow"},{"name":"induction by organism of defense-related symbiont callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related papilla formation in symbiont","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052504"}


id: PBO:0004822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Mak10 (predicted)","termid":"PBO:0004822"}


id: PBO:0056123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYSET pseudogene 1","termid":"PBO:0056123"}


id: PBO:0059343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 2","termid":"PBO:0059343"}


id: PBO:0057258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 485","termid":"PBO:0057258"}


id: FYPO:0006394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the meiotic spindle is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal meiotic spindle localization","synonyms":[{"name":"abnormal establishment of meiotic spindle localization","type":"exact"},{"name":"abnormal meiotic spindle localisation","type":"exact"},{"name":"abnormal spindle localization during meiosis","type":"exact"},{"name":"abnormal spindle localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006394"}


id: PBO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C22","termid":"PBO:0045243"}


id: GO:0005314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glutamate from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.3.10.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"glutamate:sodium symporter activity","termid":"GO:0015501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity L-glutamate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-210404","Reactome:R-HSA-428015","Reactome:R-HSA-5625029","Reactome:R-HSA-5625015","RHEA:66336"],"synonyms":[{"name":"high-affinity glutamate transmembrane transporter activity","type":"broad"},{"name":"high-affinity glutamate transporter activity","type":"broad"}],"termid":"GO:0005314"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: GO:0060958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell development","termid":"GO:0060958"}


id: PBO:0031365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-azacytidine","termid":"PBO:0031365"}


id: PBO:0090084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox11","termid":"PBO:0090084"}


id: PBO:0057191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 363","termid":"PBO:0057191"}


id: SO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 1 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_1_frameshift","termid":"SO:0000868"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_1_frameshift","synonyms":[{"name":"mRNA with plus 1 frameshift","type":"exact"}],"termid":"SO:0000321"}


id: PBO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 2","termid":"PBO:0071925"}


id: PBO:0083293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GCY1/YOR120W","termid":"PBO:0083293"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: GO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The environmental space outside of an organism; this may be a host organism in the case of parasitic and symbiotic organisms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extraorganismal space","termid":"GO:0043245"}


id: PR:O36030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup37 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C4F10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.18","synonyms":[{"name":"Spom972h-nup37","type":"exact"}],"termid":"PR:O36030"}


id: PBO:0084818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations; UPS3 has a paralog, UPS2, that arose from the whole genome duplication","termid":"PBO:0084818"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: PBO:0076912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2A antisense RNA 1","termid":"PBO:0076912"}


id: PBO:0087221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an autophagy-specific complex that includes Atg1p and Atg13p; stimulates Atg1p kinase activity; human ortholog RB1CC1/FIP200 interacts with p53, which inhibits autophagy in human cells","termid":"PBO:0087221"}


id: PBO:0073363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family G member 1","termid":"PBO:0073363"}


id: PBO:0005293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L20 (predicted)","termid":"PBO:0005293"}


id: GO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bicyclic nitroimidazole.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole metabolic process","termid":"GO:0052801"},{"relation_name":"is_a","term_name":"nitroimidazole catabolic process","termid":"GO:0052804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"bicyclic nitroimidazole catabolic process","synonyms":[{"name":"bicyclic nitroimidazole breakdown","type":"exact"},{"name":"bicyclic nitroimidazole catabolism","type":"exact"},{"name":"bicyclic nitroimidazole degradation","type":"exact"}],"termid":"GO:0052800"}


id: GO:0102974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versicolorone + NADP = hydroxyversicolorone + NADPH.","definition_xrefs":["GOC:pz","RHEA:35691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxyversicolorone reductase activity","secondary_identifiers":["EC:1.1.1.353","MetaCyc:RXN-9489"],"termid":"GO:0102974"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: FYPO:0006675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed during conjugation in which a pattern of transcriptional regulation that normally differs between parental genomes has the opposite parental specificity compared to normal. For example, a gene that is normally transcribed first from the P (h+) parental genome is instead transcribed from the M (h-) genome earlier.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"reversed parental genome-dependent asymmetric transcription","synonyms":[{"name":"reversed asymmetric transcription from parental genomes","type":"exact"},{"name":"reversed parental genome-dependent transcriptional asymmetry","type":"exact"}],"termid":"FYPO:0006675"}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: GO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = pyruvate + succinate.","definition_xrefs":["RHEA:16809","EC:4.1.3.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylisocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00409","MetaCyc:METHYLISOCITRATE-LYASE-RXN"],"synonyms":[{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase (succinate-forming)","type":"related"},{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase activity","type":"related"},{"name":"2-methylisocitrate lyase activity","type":"exact"},{"name":"MICL","type":"related"}],"termid":"GO:0046421"}


id: PBO:0084548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the quinone oxidoreductase family; up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine","termid":"PBO:0084548"}


id: PBO:0044077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTF3 divergent transcript","termid":"PBO:0044077"}


id: PR:O94397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.04c","synonyms":[{"name":"Spom972h-sgf73","type":"exact"}],"termid":"PR:O94397"}


id: PBO:0059268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 2","termid":"PBO:0059268"}


id: PBO:0017788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related CDK inhibitor Srw1","termid":"PBO:0017788"}


id: FYPO:0002230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen curved vegetative cell","synonyms":[{"name":"inviable curved cell with increased cell size","type":"related"},{"name":"inviable curved cell with increased cell volume","type":"exact"},{"name":"inviable enlarged curved cell","type":"related"},{"name":"inviable large curved cell","type":"related"},{"name":"inviable swollen curved cell","type":"exact"},{"name":"inviable swollen curved cell during vegetative growth","type":"exact"},{"name":"inviable swollen curved inviable cell","type":"exact"},{"name":"inviable swollen curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen curved vegetative cell","type":"exact"}],"termid":"FYPO:0002230"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: PBO:0059472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 2","termid":"PBO:0059472"}


id: GO:0035605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a nitric oxide (NO) group to a sulphur atom within a cysteine residue of a protein.","definition_xrefs":["GOC:sp","PMID:20972426","PMID:20972425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"peptidyl-cysteine S-nitrosylase activity","synonyms":[{"name":"S-nitrosylase activity","type":"exact"},{"name":"protein nitrosylase activity","type":"related"}],"termid":"GO:0035605"}


id: PBO:0066536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSG2 antisense RNA 1","termid":"PBO:0066536"}


id: GO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign DNA.","definition_xrefs":["PMID:20062055","GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular DNA","secondary_identifiers":["GO:0044356"],"synonyms":[{"name":"clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine","type":"narrow"}],"termid":"GO:0044355"}


id: GO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of two independently transcribed RNAs, where the one that provides the 5' portion of the final mRNA is from a splice leader RNA (SL-RNA). The SL-RNA, or mini-exon donor sequence, is added to the 5'-end of the acceptor RNA molecule which provides the mRNA body.","definition_xrefs":["GOC:krc","PMID:2675423","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA trans splicing, via spliceosome","termid":"GO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA trans splicing, SL addition","synonyms":[{"name":"nuclear mRNA trans splicing, SL addition","type":"exact"},{"name":"nuclear mRNA trans splicing, spliced leader addition","type":"exact"}],"termid":"GO:0045291"}


id: PBO:0080425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 9","termid":"PBO:0080425"}


id: GO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropanoate + NAD+ = (E)-cinnamate + NADH + H+.","definition_xrefs":["PMID:10849007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamate reductase activity","termid":"GO:0043786"}


id: PR:O14233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage stimulation factor subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00546","PANTHER:PTHR19980:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein rna14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.17","secondary_identifiers":["UniProtKB:O14233"],"synonyms":[{"name":"Spom972h-CSTF3","type":"exact"}],"termid":"PR:O14233"}


id: GO:0042065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:jid","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell growth","termid":"GO:0042065"}


id: PBO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 divergent transcript","termid":"PBO:0060852"}


id: GO:0106367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dGTP = a 2'-deoxyribonucleoside 5'-diphosphate + dGDP.","definition_xrefs":["RHEA:62128","PMID:20497505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"(deoxy)nucleoside phosphate kinase activity, dGTP as phosphate donor","termid":"GO:0106367"}


id: PBO:0061237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 ribosome biogenesis factor","termid":"PBO:0061237"}


id: FYPO:0007380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0005568"],"is_obsolete":false,"name":"elongated T-shaped vegetative cell","synonyms":[{"name":"elongated T-shaped cell during vegetative growth","type":"exact"},{"name":"elongated T-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"long T-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007380"}


id: GO:0160109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of a plant from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant gross anatomical part developmental process","synonyms":[{"name":"plant development","type":"related"}],"termid":"GO:0160109"}


id: PBO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga5","termid":"PBO:0004076"}


id: PATO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being overfilled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crowded","termid":"PATO:0000619"}


id: PBO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm3","termid":"PBO:0005108"}


id: PBO:0028767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_glucose_starvation","termid":"PBO:0028767"}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: GO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lamin/chromatin binding (obsolete GO:0003683)","synonyms":[{"name":"lamin/chromatin binding","type":"exact"}],"termid":"GO:0003683"}


id: PBO:0077552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM258 pseudogene 2","termid":"PBO:0077552"}


id: FYPO:0000133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"},{"relation_name":"output_of","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000005","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0000133"}


id: PBO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: GO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue development","synonyms":[{"name":"regulation of heart muscle development","type":"exact"}],"termid":"GO:0055024"}


id: GO:0008521
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102581],"is_not":false,"summary":null,"term":"GO:0008521"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetyl-CoA from one side of a membrane to the other. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","termid":"GO:0071077"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5649742","Reactome:R-HSA-727759"],"synonyms":[{"name":"acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0008521","terms_by_termid":{"GO:0008521":null}}


id: PBO:0091919
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Frataxin Homolog","termid":"PBO:0091919"}


id: PBO:0079654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 2","termid":"PBO:0079654"}


id: PBO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure uopdated","termid":"PBO:0000759"}


id: GO:0035202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the tracheal pits, the first tube-like structures to form in the open tracheal system. Once cells are determined to their tracheal cell fate, the tracheal pits arise by invagination of each ectodermal cluster of tracheal placode cells, between 5 and 7 hours after egg laying. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11063940","PMID:14570584","PMID:11992723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal pit formation in open tracheal system","synonyms":[{"name":"tracheal placode invagination","type":"related"},{"name":"tracheal sac formation","type":"broad"}],"termid":"GO:0035202"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: GO:0099107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of an ion channel via direct interaction with it as part of G protein-coupled receptor signaling.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"ion channel regulator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099107"}


id: PBO:0039780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 5","termid":"PBO:0039780"}


id: GO:0019912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; increases the activity of a cyclin-dependent protein kinase (CDK).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004672","GO:0098772","GO:0016301","GO:0030234","GO:0003824","GO:0016740","GO:0140096","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase activity","secondary_identifiers":["GO:0019913"],"synonyms":[{"name":"CAK","type":"exact"},{"name":"cdk-activating kinase activity","type":"exact"},{"name":"cyclin-dependent protein kinase activating kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0019912"}


id: PBO:0049105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 2","termid":"PBO:0049105"}


id: PBO:0067382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 484, pseudogene","termid":"PBO:0067382"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: PBO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methylation","termid":"PBO:0030442"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: GO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nuclear ribonucleoprotein (obsolete GO:0003734)","synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0003734"}


id: PBO:0059511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome b","termid":"PBO:0059511"}


id: GO:1902998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15897157","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"positively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of neurofibrillary tangle assembly","synonyms":[{"name":"activation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"activation of neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of neurofibrillary tangle formation","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of neurofibrillary tangle formation","type":"exact"},{"name":"positive regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"upregulation of neurofibrillary tangle formation","type":"exact"},{"name":"upregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902998"}


id: GO:0030026
data:
  {"annotated_genes":["SJAG_04867","SJAG_04111","SJAG_04975","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90993,95971,99627,113068],"is_not":false,"summary":null,"term":"GO:0030026"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of manganese ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"manganese ion homeostasis","termid":"GO:0055071"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_04111":null,"SJAG_04867":null,"SJAG_04975":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular manganese ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular manganese ion homeostasis","type":"exact"},{"name":"manganese homeostasis","type":"broad"}],"termid":"GO:0030026","terms_by_termid":{"GO:0030026":null}}


id: PBO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain Dic1","termid":"PBO:0003405"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: PBO:0049880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase family member 1","termid":"PBO:0049880"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R1H + R2OOH = R1OH + R2OH.","definition_xrefs":["PMID:19467604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"plant seed peroxidase activity","secondary_identifiers":["EC:1.11.2.3","MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"related"}],"termid":"GO:1990137"}


id: PBO:0029373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth,_with_protein_distributed_in_non-growing_half_of_cell","termid":"PBO:0029373"}


id: SO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CAGE tag is a sequence tag hat corresponds to 5' ends of mRNA at cap sites, produced by cap analysis gene expression and used to identify transcriptional start sites.","definition_xrefs":["SO:andrewgibson"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAGE_tag","synonyms":[{"name":"CAGE tag","type":"exact"}],"termid":"SO:0001916"}


id: PBO:0057127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR210 host gene","termid":"PBO:0057127"}


id: GO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament cytoskeleton","termid":"GO:0045111"}


id: PBO:0079408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 2","termid":"PBO:0079408"}


id: GO:0006959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated through a body fluid.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"humoral immune response","secondary_identifiers":["Wikipedia:Humoral_immunity"],"termid":"GO:0006959"}


id: PBO:0041946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 6","termid":"PBO:0041946"}


id: PBO:0071048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 50","termid":"PBO:0071048"}


id: PBO:0087543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); putative RNA helicase related to Ski2p; involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses; human homolog is ASCC3","termid":"PBO:0087543"}


id: PBO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 7","termid":"PBO:0046626"}


id: PBO:0017950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Yar1 (predicted)","termid":"PBO:0017950"}


id: PBO:0050864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ID2 antisense RNA 1","termid":"PBO:0050864"}


id: GO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent phospholipid binding","termid":"GO:0005544"}


id: GO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-12","synonyms":[{"name":"response to IL-12","type":"exact"}],"termid":"GO:0070671"}


id: GO:1905866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["PMID:26567215","GO_REF:0000058","GOC:TermGenie","GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"positively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"activation of ATG1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"activation of ATG1-ATG13 complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"activation of Atg1p signalling complex assembly","type":"narrow"},{"name":"activation of Atg1p signalling complex formation","type":"narrow"},{"name":"activation of ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ULK1 signaling complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"positive regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"positive regulation of ATG1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"positive regulation of Atg1p signalling complex formation","type":"exact"},{"name":"positive regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"upregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"upregulation of Atg1p signalling complex formation","type":"exact"},{"name":"upregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905866"}


id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: PBO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 43","termid":"PBO:0060096"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:25639242","PomBase:vw","PMID:10640599","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: PBO:0085958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; originally considered essential but deletion overlapped the TATA box of neighboring essential gene HYP2, while deletion that avoids the HYP2 TATA box is viable; transcription may be regulated by Gcr1p","termid":"PBO:0085958"}


id: FYPO:0003339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is decreased. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring assembly","synonyms":[{"name":"decreased rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring assembly","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"decreased rate of mitotic contractile ring assembly","type":"exact"},{"name":"reduced rate of actomyosin contractile ring assembly","type":"exact"}],"termid":"FYPO:0003339"}


id: PATO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc).","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shape","secondary_identifiers":["PATO:0001647"],"synonyms":[{"name":"relational shape quality","type":"exact"}],"termid":"PATO:0000052"}


id: FYPO:0002046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to stress","synonyms":[{"name":"increased cell population growth during cellular response to stress","type":"exact"},{"name":"increased growth during cellular response to stress","type":"exact"},{"name":"resistant to stress","type":"exact"},{"name":"stress resistance: increased","type":"related"}],"termid":"FYPO:0002046"}


id: PBO:0090998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication preinitiation complex assembly protein","termid":"PBO:0090998"}


id: GO:0099703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The induction of synaptic vesicle release by any process that leads to a rise in intracellular calcium ion concentration at the presynapse. This is the first step in synaptic transmission.","definition_xrefs":["ISBN:9780071120005","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration","termid":"GO:0099703"}


id: PBO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga5","termid":"PBO:0036438"}


id: GO:1905810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["PMID:27779093","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of excitatory synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905810"}


id: GO:0033559
data:
  {"annotated_genes":["SJAG_00099","SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110457,69970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"unsaturated fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-782","MetaCyc:PWY-762"],"synonyms":[{"name":"unsaturated fatty acid metabolism","type":"exact"}],"termid":"GO:0033559","terms_by_termid":{"GO:0006636":null}}


id: GO:0009919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The division of a cell into two daughter cells with cell walls.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis (sensu Viridiplantae) (obsolete GO:0009919)","synonyms":[{"name":"cytokinesis (sensu Viridiplantae)","type":"exact"}],"termid":"GO:0009919"}


id: PBO:0044894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 7","termid":"PBO:0044894"}


id: PBO:0059329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 3","termid":"PBO:0059329"}


id: PBO:0057340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-1","termid":"PBO:0057340"}


id: PBO:0056020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 1","termid":"PBO:0056020"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: GO:1902679
data:
  {"annotated_genes":["SJAG_04607","SJAG_02104","SJAG_04512","SJAG_00142","SJAG_00802","SJAG_03319","SJAG_01799","SJAG_04921","SJAG_03997","SJAG_04381","SJAG_00861","SJAG_05153","SJAG_04613","SJAG_01707","SJAG_00163","SJAG_00441","SJAG_02898","SJAG_04249","SJAG_00969","SJAG_04389","SJAG_02730","SJAG_04539","SJAG_02385","SJAG_02752","SJAG_00926","SJAG_01680","SJAG_04039","SJAG_02981","SJAG_02444","SJAG_03911","SJAG_01230","SJAG_02691","SJAG_04186","SJAG_01157","SJAG_01311","SJAG_01254","SJAG_01494","SJAG_00124","SJAG_04584","SJAG_00410","SJAG_01199","SJAG_00581","SJAG_01728","SJAG_01000","SJAG_02252","SJAG_04312","SJAG_02858","SJAG_00266","SJAG_01804","SJAG_02846","SJAG_03143","SJAG_03845","SJAG_04268","SJAG_03982","SJAG_03081","SJAG_02255","SJAG_04026","SJAG_03473","SJAG_00290","SJAG_00987","SJAG_00996","SJAG_03067","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102120,109434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[103876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[96853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[111701,89509,90284,87698,100617,102627,109883,87676,107096,102934,94623,83401,103878,105397,100026,86707,78577,91961,83045,96750,88843,95547,104933,86779,88905,100861,58995,104370,102609,110636,108071,113454,89693,99034,99383,102883,104486,108987,102122,84329,110311,101680,102365,112154,85564,89008,89855,90366,99789,106672,102378,98580,104146,101770,97634,100092,96772,109315,89368,89408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[92076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[96773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[114018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[88200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031564"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GO:jl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"negatively_regulates","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01494":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02252":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02691":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_03911":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"down regulation of RNA anabolism","type":"exact"},{"name":"down regulation of RNA biosynthesis","type":"exact"},{"name":"down regulation of RNA biosynthetic process","type":"exact"},{"name":"down regulation of RNA formation","type":"exact"},{"name":"down regulation of RNA synthesis","type":"exact"},{"name":"down-regulation of RNA anabolism","type":"exact"},{"name":"down-regulation of RNA biosynthesis","type":"exact"},{"name":"down-regulation of RNA biosynthetic process","type":"exact"},{"name":"down-regulation of RNA formation","type":"exact"},{"name":"down-regulation of RNA synthesis","type":"exact"},{"name":"downregulation of RNA anabolism","type":"exact"},{"name":"downregulation of RNA biosynthesis","type":"exact"},{"name":"downregulation of RNA biosynthetic process","type":"exact"},{"name":"downregulation of RNA formation","type":"exact"},{"name":"downregulation of RNA synthesis","type":"exact"},{"name":"inhibition of RNA anabolism","type":"narrow"},{"name":"inhibition of RNA biosynthesis","type":"narrow"},{"name":"inhibition of RNA biosynthetic process","type":"narrow"},{"name":"inhibition of RNA formation","type":"narrow"},{"name":"inhibition of RNA synthesis","type":"narrow"},{"name":"negative regulation of RNA anabolism","type":"exact"},{"name":"negative regulation of RNA biosynthesis","type":"exact"},{"name":"negative regulation of RNA formation","type":"exact"},{"name":"negative regulation of RNA synthesis","type":"exact"}],"termid":"GO:1902679","terms_by_termid":{"GO:0000122":null,"GO:0000433":null,"GO:0010621":null,"GO:0016480":null,"GO:0031564":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: PBO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication checkpoint kinase Cds1","termid":"PBO:0005261"}


id: PBO:0087713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; target of the global repressor Tup1p","termid":"PBO:0087713"}


id: GO:0051622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of norepinephrine uptake","termid":"GO:0051621"},{"relation_name":"negatively_regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of norepinephrine uptake","synonyms":[{"name":"down regulation of norepinephrine uptake","type":"exact"},{"name":"down-regulation of norepinephrine uptake","type":"exact"},{"name":"downregulation of norepinephrine uptake","type":"exact"},{"name":"negative regulation of levarterenol uptake","type":"exact"},{"name":"negative regulation of noradrenaline uptake","type":"exact"},{"name":"negative regulation of norepinephrine import","type":"exact"}],"termid":"GO:0051622"}


id: FYPO:0000615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic S phase","synonyms":[{"name":"decreased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: increased rate","type":"related"},{"name":"reduced duration of mitotic S phase","type":"exact"}],"termid":"FYPO:0000615"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: GO:0010925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of inositol-polyphosphate 5-phosphatase activity, the catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of inositol-polyphosphate 5-phosphatase activity","termid":"GO:0010924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inositol-polyphosphate 5-phosphatase activity","termid":"GO:0010925"}


id: GO:0035951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oligopeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035951)","synonyms":[{"name":"positive regulation of oligopeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035951"}


id: PR:Q09868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cip2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator cip2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.03","synonyms":[{"name":"Spom972h-cip2","type":"exact"},{"name":"csx1-interacting protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09868"}


id: PBO:0110424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 3","termid":"PBO:0110424"}


id: GO:1902979
data:
  {"annotated_genes":["SJAG_00998"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87690],"is_not":false,"summary":null,"term":"GO:1902979"}]},"cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979","terms_by_termid":{"GO:1902979":null}}


id: PATO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased quality","termid":"PATO:0002301"}


id: PBO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatidylserine_externalization","termid":"PBO:0035891"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: PBO:0085256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagy and CVT; required for cytoplasm-to-vacuole targeting (Cvt) pathway and efficient macroautophagy; cycles between the phagophore assembly site (PAS) and non-PAS locations; forms a complex with Atg9p and Atg27p","termid":"PBO:0085256"}


id: GO:0090721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response mediated by naive T or B cells against an antigen not previously encountered by immune system.","definition_xrefs":["GOC:add","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"primary adaptive immune response","termid":"GO:0090720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary adaptive immune response involving T cells and B cells","termid":"GO:0090721"}


id: PBO:0048414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 3","termid":"PBO:0048414"}


id: PBO:0066458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 11, pseudogene","termid":"PBO:0066458"}


id: PBO:0038586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAA2 pseudogene 1","termid":"PBO:0038586"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: PBO:0049269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell associated 1","termid":"PBO:0049269"}


id: PBO:0091039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit F","termid":"PBO:0091039"}


id: GO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol metabolic process","termid":"GO:0072390"}


id: GO:0033126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP catabolic process (obsolete GO:0033126)","synonyms":[{"name":"positive regulation of GTP breakdown","type":"exact"},{"name":"positive regulation of GTP catabolism","type":"exact"},{"name":"positive regulation of GTP degradation","type":"exact"}],"termid":"GO:0033126"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["EC:3.2.1.78","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannan 1,3-beta-mannosidase activity","synonyms":[{"name":"1,3-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,3-mannan 3-mannanohydrolase activity","type":"related"},{"name":"exo-1,3-beta-mannanase activity","type":"related"},{"name":"exo-1,3-mannanase activity","type":"related"},{"name":"exo-beta-1,3-mannase activity","type":"related"}],"termid":"GO:0052789"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: GO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate.","definition_xrefs":["EC:2.7.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP-specific glucokinase activity","secondary_identifiers":["Reactome:R-HSA-5696021","RHEA:11460"],"synonyms":[{"name":"ADP-dependent glucokinase activity","type":"related"},{"name":"ADP:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0043843"}


id: PBO:0080250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 13 pseudogene","termid":"PBO:0080250"}


id: PR:O94501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.03","secondary_identifiers":["UniProtKB:O94501"],"synonyms":[{"name":"CCT-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT1","type":"exact"},{"name":"TCP-1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94501"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


id: PBO:0076100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX5 divergent transcript","termid":"PBO:0076100"}


id: PBO:0073796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 3","termid":"PBO:0073796"}


id: PBO:0074994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-5","termid":"PBO:0074994"}


id: PBO:0004736
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.17","termid":"PBO:0004736"}


id: PBO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 5","termid":"PBO:0061585"}


id: GO:0009097
data:
  {"annotated_genes":["SJAG_00234","SJAG_06635","SJAG_00107","SJAG_00830","SJAG_04149","SJAG_03985","SJAG_00396","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83073,86201,99108,99607,104228,106375,107046,109276,111854],"is_not":false,"summary":null,"term":"GO:0009097"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ILEUSYN-PWY"],"synonyms":[{"name":"isoleucine anabolism","type":"exact"},{"name":"isoleucine biosynthesis","type":"exact"},{"name":"isoleucine formation","type":"exact"},{"name":"isoleucine synthesis","type":"exact"}],"termid":"GO:0009097","terms_by_termid":{"GO:0009097":null}}


id: PBO:0071821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 16","termid":"PBO:0071821"}


id: SO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamic acid anticodon, and a 3' glutamic acid binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamine_tRNA_primary_transcript","termid":"SO:0000217"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl_tRNA","synonyms":[{"name":"glutamyl tRNA","type":"exact"},{"name":"glutamyl-transfer RNA","type":"related"},{"name":"glutamyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000260"}


id: GO:1904229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:18160053","GO_REF:0000059","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of succinate dehydrogenase activity","synonyms":[{"name":"regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"regulation of fumarate reductase activity","type":"exact"},{"name":"regulation of fumaric hydrogenase activity","type":"exact"},{"name":"regulation of succinate oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"regulation of succinic dehydrogenase activity","type":"broad"},{"name":"regulation of succinodehydrogenase activity","type":"exact"},{"name":"regulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904229"}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: PBO:0065648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type B","termid":"PBO:0065648"}


id: FYPO:0004193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during mitotic S phase","synonyms":[{"name":"decreased protein accumulation during mitotic S phase","type":"related"},{"name":"decreased protein level during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic S phase","type":"exact"}],"termid":"FYPO:0004193"}


id: PBO:0049750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta pseudogene 1","termid":"PBO:0049750"}


id: PBO:0082214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 3 subunit of the 20S proteasome; the only nonessential 20S subunit; may be replaced by the alpha 4 subunit (Pre6p) under stress conditions to create a more active proteasomal isoform","termid":"PBO:0082214"}


id: PBO:0062925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y12","termid":"PBO:0062925"}


id: PBO:0110356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 3","termid":"PBO:0110356"}


id: PATO:0000947
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elliptic","synonyms":[{"name":"ellipse-shaped","type":"exact"},{"name":"ellipsoid","type":"exact"},{"name":"elliptical","type":"exact"},{"name":"oval","type":"related"},{"name":"ovoid","type":"related"}],"termid":"PATO:0000947"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: GO:0022835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"transmitter-gated channel activity","synonyms":[{"name":"extracellular substance gated channel activity","type":"exact"},{"name":"neurotransmitter-gated channel activity","type":"exact"}],"termid":"GO:0022835"}


id: GO:0008832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dGTP + H2O = 2'-deoxyguanosine + 2 H+ + triphosphate.","definition_xrefs":["EC:3.1.5.1","RHEA:15193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triphosphoric monoester hydrolase activity","termid":"GO:0016793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dGTPase activity","secondary_identifiers":["KEGG_REACTION:R01856","MetaCyc:DGTPTRIPHYDRO-RXN"],"synonyms":[{"name":"dGTP triphosphohydrolase activity","type":"related"},{"name":"deoxy-GTPase activity","type":"related"},{"name":"deoxyguanosine 5-triphosphate triphosphohydrolase activity","type":"related"},{"name":"deoxyguanosine triphosphatase activity","type":"related"},{"name":"deoxyguanosine triphosphate triphosphohydrolase activity","type":"related"},{"name":"deoxyguanosinetriphosphate triphosphohydrolase activity","type":"exact"}],"termid":"GO:0008832"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["RHEA:23196","EC:6.3.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["KEGG_REACTION:R04870","MetaCyc:6.3.2.26-RXN"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: PBO:0051707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase J","termid":"PBO:0051707"}


id: PBO:0064134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 1","termid":"PBO:0064134"}


id: GO:0046081
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94729],"is_not":false,"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUTP metabolic process","termid":"GO:0046080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUTP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUTP breakdown","type":"exact"},{"name":"dUTP catabolism","type":"exact"},{"name":"dUTP degradation","type":"exact"}],"termid":"GO:0046081","terms_by_termid":{"GO:0046081":null}}


id: GO:0035316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of non-sensory hairs. These hairs are polarized cellular extensions that cover much of the insect epidermis.","definition_xrefs":["GOC:mtg_sensu","PMID:11064425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"hair cell differentiation","termid":"GO:0035315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-sensory hair organization","synonyms":[{"name":"non-sensory hair organization and biogenesis","type":"related"},{"name":"trichome organisation","type":"broad"},{"name":"trichome organization and biogenesis","type":"broad"}],"termid":"GO:0035316"}


id: GO:0035079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decondensing (loosening) and swelling of the chromosomal sites of target genes on polytene chromosomes following response to a stimulus, to facilitate sudden bursts of transcriptional activity in response to transient environmental signals.","definition_xrefs":["GOC:bf","PMID:12543962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polytene chromosome puffing","termid":"GO:0035079"}


id: PBO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 3","termid":"PBO:0061210"}


id: GO:1904634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:23692924","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of podocyte apoptotic process","termid":"GO:1904633"},{"relation_name":"negatively_regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of podocyte apoptotic process","synonyms":[{"name":"down regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down regulation of podocyte apoptosis","type":"narrow"},{"name":"down regulation of podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down-regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down-regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down-regulation of podocyte apoptosis","type":"narrow"},{"name":"down-regulation of podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"downregulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"downregulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"downregulation of podocyte apoptosis","type":"narrow"},{"name":"downregulation of podocyte apoptotic process","type":"exact"},{"name":"inhibition of glomerular podocyte apoptosis","type":"narrow"},{"name":"inhibition of glomerular podocyte apoptotic process","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptotic process","type":"narrow"},{"name":"inhibition of podocyte apoptosis","type":"narrow"},{"name":"inhibition of podocyte apoptotic process","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"negative regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"negative regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"negative regulation of podocyte apoptosis","type":"exact"}],"termid":"GO:1904634"}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: PBO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-24 (pseudogene)","termid":"PBO:0051439"}


id: GO:0000444
data:
  {"annotated_genes":["SJAG_01228","SJAG_00418","SJAG_02346","SJAG_03220"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91230,95008,106248,106292],"is_not":false,"summary":null,"term":"GO:0000444"}]},"cv_name":"cellular_component","definition":"A multiprotein kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans, it consists of MIS12, DSN1, NSL1 and PMF1.","definition_xrefs":["PMID:16585270","GOC:krc","PMID:14633972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_01228":null,"SJAG_02346":null,"SJAG_03220":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0000776","GO:0032991"],"is_obsolete":false,"name":"MIS12/MIND type complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000818"],"synonyms":[{"name":"MIND complex","type":"exact"},{"name":"Mis12 complex","type":"narrow"},{"name":"Mtw1p Including Nnf1p-Nsl1p-Dsn1p complex","type":"related"},{"name":"nuclear MIS12/MIND complex","type":"related"}],"termid":"GO:0000444","terms_by_termid":{"GO:0000444":null}}


id: PBO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1 (predicted)","termid":"PBO:0003246"}


id: PBO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 31","termid":"PBO:0072100"}


id: GO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of reactive oxygen species produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced reactive oxygen species (obsolete GO:0052384)","synonyms":[{"name":"evasion by organism of cellular damage caused by symbiont oxidative burst","type":"narrow"},{"name":"evasion or tolerance by organism of reactive oxygen species produced during symbiont defense response","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont metabolic burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont oxidative burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont respiratory burst","type":"exact"},{"name":"evasion or tolerance of reactive oxygen species produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of symbiont-produced AOS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROIs","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced active oxygen species","type":"exact"},{"name":"evasion or tolerance of symbiont-produced reactive oxygen intermediates","type":"exact"}],"termid":"GO:0052384"}


id: PBO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 40, pseudogene","termid":"PBO:0070083"}


id: PBO:0038871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 2","termid":"PBO:0038871"}


id: PBO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase Pdi2","termid":"PBO:0015226"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["VZ:983","UniProtKB-KW:KW-1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: GO:0005680
data:
  {"annotated_genes":["SJAG_01801","SJAG_01956","SJAG_03575","SJAG_03809","SJAG_04661","SJAG_04853","SJAG_03350","SJAG_05329","SJAG_04180","SJAG_04520","SJAG_03561","SJAG_03037","SJAG_02186","SJAG_05236","SJAG_00666","SJAG_00146","SJAG_00071","SJAG_03351","SJAG_03858"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63469,84173,84431,85855,87274,89377,90824,92289,95333,95338,95868,96559,97615,98074,102046,103492,108193,109142,111002],"is_not":false,"summary":null,"term":"GO:0005680"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B.","definition_xrefs":["GOC:jh","PMID:10465783","PMID:10611969","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00666":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02186":null,"SJAG_03037":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04180":null,"SJAG_04520":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"anaphase-promoting complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Anaphase-promoting_complex"],"synonyms":[{"name":"APC","type":"broad"},{"name":"anaphase promoting complex","type":"exact"},{"name":"cyclosome","type":"exact"}],"termid":"GO:0005680","terms_by_termid":{"GO:0005680":null}}


id: PBO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase Fmp31 (predicted)","termid":"PBO:0002245"}


id: PBO:0011425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 complex phosphatidylinositol pseudokinase complex subunit Tra2","termid":"PBO:0011425"}


id: PBO:0075458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 8","termid":"PBO:0075458"}


id: PBO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 92 (putative)","termid":"PBO:0042862"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: PBO:0085478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable membrane protein with three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase; YDR018C has a paralog, CST26, that arose from the whole genome duplication","termid":"PBO:0085478"}


id: PBO:0027128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_late_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027128"}


id: PBO:0004351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein","termid":"PBO:0004351"}


id: GO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to becoming a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate commitment","termid":"GO:0042684"}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: GO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"},{"relation_name":"negatively_regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma kallikrein-kinin cascade","synonyms":[{"name":"down regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of plasma kallikrein-kinin cascade","type":"narrow"}],"termid":"GO:0002549"}


id: PBO:0111068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fbp1 upstream regulatory lncRNA c","termid":"PBO:0111068"}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: PBO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 2B","termid":"PBO:0061729"}


id: PBO:0065817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B, member RAS oncogene family","termid":"PBO:0065817"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: PBO:0085524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication","termid":"PBO:0085524"}


id: PBO:0072136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 13","termid":"PBO:0072136"}


id: PBO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 7","termid":"PBO:0042423"}


id: GO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in contraction of the apical end of a polarized columnar epithelial cell, contributing to formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction involved in gastrulation","termid":"GO:0003384"},{"relation_name":"part_of","term_name":"ventral furrow formation","termid":"GO:0007370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}


id: GO:0033149
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71381],"is_not":false,"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a FFAT motif, a short motif containing diphenylalanine in an acidic tract that targets proteins to the cytosolic surface of the ER and to the nuclear membrane by binding directly to members of the VAP (VAMP-associated protein) protein family.","definition_xrefs":["PMID:15455074","PMID:16004875","PMID:12727870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FFAT motif binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033149","terms_by_termid":{"GO:0033149":null}}


id: PBO:0086187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine phosphatase; regulates Hsp90 chaperone by affecting its ATPase and cochaperone binding activities; has similarity to human phosphatase PP5; present in both the nucleus and cytoplasm; expressed during logarithmic growth","termid":"PBO:0086187"}


id: PBO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_ornithine_level","termid":"PBO:0030104"}


id: GO:1901810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-carotene.","definition_xrefs":["MetaCyc:PWY-5943","UniPathway:UPA00802","PMID:11387982","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene metabolic process","synonyms":[{"name":"beta-carotene metabolism","type":"exact"}],"termid":"GO:1901810"}


id: GO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear retinoid X receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear retinoic acid receptor binding","termid":"GO:0042974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear retinoid X receptor binding","synonyms":[{"name":"RXR binding","type":"exact"},{"name":"retinoid X receptor binding","type":"broad"}],"termid":"GO:0046965"}


id: PBO:0052260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2A","termid":"PBO:0052260"}


id: PBO:0017505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stretch-activated calcium ion channel Yam8","termid":"PBO:0017505"}


id: PBO:0091596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerate PhosphoMutase","termid":"PBO:0091596"}


id: GO:1903202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["PMID:24252804","GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oxidative stress-induced cell death (obsolete GO:1903202)","synonyms":[{"name":"down regulation of cell death in response to oxidative stress","type":"exact"},{"name":"down-regulation of cell death in response to oxidative stress","type":"exact"},{"name":"downregulation of cell death in response to oxidative stress","type":"exact"},{"name":"inhibition of cell death in response to oxidative stress","type":"narrow"},{"name":"negative regulation of cell death in response to oxidative stress","type":"exact"},{"name":"protection against oxidative stress-induced cell death","type":"related"}],"termid":"GO:1903202"}


id: MOD:00653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an palmitoylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-palmitoylated residue","synonyms":[{"name":"S-hexadecanoylated residue","type":"exact"},{"name":"SPamRes","type":"exact"}],"termid":"MOD:00653"}


id: PBO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease Ure2","termid":"PBO:0002787"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PBO:0061618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4","termid":"PBO:0061618"}


id: GO:1904024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20935145","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"negatively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"down regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down regulation of homofermentation","type":"exact"},{"name":"down regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down regulation of homofermentative pathway","type":"exact"},{"name":"down regulation of homolactate fermentation","type":"exact"},{"name":"down regulation of homolactic fermentation","type":"exact"},{"name":"down-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down-regulation of homofermentation","type":"exact"},{"name":"down-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down-regulation of homofermentative pathway","type":"exact"},{"name":"down-regulation of homolactate fermentation","type":"exact"},{"name":"down-regulation of homolactic fermentation","type":"exact"},{"name":"downregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"downregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"downregulation of homofermentation","type":"exact"},{"name":"downregulation of homofermentative lactate fermentation","type":"exact"},{"name":"downregulation of homofermentative pathway","type":"exact"},{"name":"downregulation of homolactate fermentation","type":"exact"},{"name":"downregulation of homolactic fermentation","type":"exact"},{"name":"inhibition of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"inhibition of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"inhibition of homofermentation","type":"narrow"},{"name":"inhibition of homofermentative lactate fermentation","type":"narrow"},{"name":"inhibition of homofermentative pathway","type":"narrow"},{"name":"inhibition of homolactate fermentation","type":"narrow"},{"name":"inhibition of homolactic fermentation","type":"narrow"},{"name":"negative regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"negative regulation of homofermentation","type":"exact"},{"name":"negative regulation of homofermentative lactate fermentation","type":"exact"},{"name":"negative regulation of homofermentative pathway","type":"exact"},{"name":"negative regulation of homolactate fermentation","type":"exact"},{"name":"negative regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904024"}


id: PBO:0012245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012245"}


id: SO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match to a primer sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_match","synonyms":[{"name":"primer match","type":"exact"}],"termid":"SO:0001472"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: GO:0102443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(1-) + a (2S)-2-hydroxycarboxylate = NADH(2-) + H+ + a 2-oxo carboxylate.","definition_xrefs":["EC:1.1.1.337","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:34555","MetaCyc:RXN-13927"],"termid":"GO:0102443"}


id: PBO:0069212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 467, pseudogene","termid":"PBO:0069212"}


id: GO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + A = AH2.","definition_xrefs":["EC:1.12.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:RXN0-5256","RHEA:12116","MetaCyc:RXN0-4141"],"synonyms":[{"name":"H2 producing hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:(acceptor) oxidoreductase activity","type":"related"},{"name":"hydrogen:acceptor oxidoreductase activity","type":"related"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0033748"}


id: GO:0150127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-33 production","secondary_identifiers":["GO:0150130","GO:0150123"],"synonyms":[{"name":"regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150127"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_03221","SJAG_02708","SJAG_00757","SJAG_02267","SJAG_01708","SJAG_02079","SJAG_04530","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96298,91849,94797,103556,97983,88233,106234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[92611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[106240,103561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["PMID:27113759","PMID:27233470","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 12","termid":"PBO:0071817"}


id: GO:1902982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA strand elongation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA strand elongation involved in premeiotic DNA replication","synonyms":[{"name":"DNA strand elongation involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902982"}


id: PATO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated red","synonyms":[{"name":"bright red","type":"related"}],"termid":"PATO:0001283"}


id: FYPO:0004208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K4 specific histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity (H3-K4 specific)","synonyms":[{"name":"abnormal H3-K4 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004208"}


id: PBO:0085685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from arrest in response to pheromone; acts in a cell cycle arrest recovery pathway independent from Far1p; interacts with Far3p, Far7p, Far8p, Far9p, and Far11p; potential Cdc28p substrate; FAR10 has a paralog, VPS64, that arose from the whole genome duplication","termid":"PBO:0085685"}


id: SO:1000181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the gene structure by causing a fusion to another gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000181 sequence_variant_causing_gene_fusion (obsolete SO:1000181)","synonyms":[{"name":"mutation causing gene fusion","type":"related"},{"name":"sequence variant causing gene fusion","type":"exact"}],"termid":"SO:1000181"}


id: GO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadal mesoderm development","termid":"GO:0007506"}


id: PBO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 3","termid":"PBO:0047687"}


id: PBO:0051184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-75 (pseudogene)","termid":"PBO:0051184"}


id: PR:G2TRP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam7 gene.","definition_xrefs":["UniProtKB:G2TRP0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.23","synonyms":[{"name":"Spom972h-tam7","type":"exact"},{"name":"transcripts altered in meiosis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRP0"}


id: PBO:0087436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit e of mitochondrial F1F0-ATPase; ATPase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; essential for the dimeric and oligomeric state of ATP synthase, which in turn determines the shape of inner membrane cristae","termid":"PBO:0087436"}


id: MOD:00352
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl 5-omega-hydroxyceramide ester.","definition_xrefs":["PubMed:10411887","RESID:AA0347","PubMed:9651377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl 5-omega-hydroxyceramide ester","synonyms":[{"name":"(S)-2-amino-5-[30-((2S,3R,4E)-1,3-dihydroxyicos-4-en-2-ylamino)-30-oxotriacontan-1-yloxy]-5-oxopentanoic acid","type":"exact"},{"name":"2-[30-(isoglutamyloxy)triacontanoyl]icosasphingosine","type":"exact"},{"name":"L-glutamyl 5-omega-hydroxyceramide ester","type":"exact"},{"name":"LIPID Omega-hydroxyceramide glutamate ester","type":"exact"}],"termid":"MOD:00352"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: PBO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tex1 (predicted)","termid":"PBO:0005260"}


id: PBO:0076112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18","termid":"PBO:0076112"}


id: FYPO:0004533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal beta-glucan level","termid":"FYPO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell wall beta-glucan level","synonyms":[{"name":"normal cell wall beta-D-glucan level","type":"exact"},{"name":"normal cell wall beta-glucan accumulation","type":"related"},{"name":"normal cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004533"}


id: PBO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31 (predicted)","termid":"PBO:0017501"}


id: FYPO:0007858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes one or more rounds of rereplication of the entire genome without forming a mitotic spindle or undergoing cytokinesis.","definition_xrefs":["PMID:20967237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"mitotic DNA re-replication in absence of mitotic spindle","synonyms":[{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication in the absence of normal mitotic spindle assembly and cytokinesis","type":"exact"}],"termid":"FYPO:0007858"}


id: GO:0016009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The smaller of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation.","definition_xrefs":["PMID:17123504","GOC:mah","PMID:30802236","PMID:24211517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"minor mitochondrial derivative","termid":"GO:0016009"}


id: SO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA including D-region with 5' UTR and 3' UTR, also designated as D-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_gene_segment","synonyms":[{"name":"D gene","type":"exact"},{"name":"D-GENE","type":"exact"},{"name":"INSDC_feature:D_segment","type":"exact"}],"termid":"SO:0000458"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: GO:0008771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + (citrate (pro-3S)-lyase) (thiol form) = AMP + diphosphate + (citrate (pro-3S)-lyase) (acetyl form).","definition_xrefs":["EC:6.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"[citrate (pro-3S)-lyase] ligase activity","secondary_identifiers":["KEGG_REACTION:R04449","MetaCyc:CITC-RXN","RHEA:23788"],"synonyms":[{"name":"acetate: SH-acyl-carrier-protein enzyme ligase (AMP)","type":"related"},{"name":"acetate:HS-citrate lyase ligase activity","type":"related"},{"name":"acetate:citrate-(pro-3S)-lyase(thiol-form) ligase (AMP-forming)","type":"broad"},{"name":"citrate (pro-3S)-lyase ligase activity","type":"related"},{"name":"citrate lyase ligase activity","type":"related"},{"name":"citrate lyase synthetase activity","type":"related"}],"termid":"GO:0008771"}


id: PBO:0063764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain containing endocytic trafficking adaptor 1","termid":"PBO:0063764"}


id: GO:0099614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported, tethered to or otherwise maintained in a spore cell wall.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to spore cell wall","synonyms":[{"name":"protein targeting to spore cell wall","type":"related"}],"termid":"GO:0099614"}


id: GO:0061897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinal + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinal + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans retinal 3,4-desaturase activity","termid":"GO:0061897"}


id: GO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal cysteine of proteins to form the derivative N-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-cysteine acetylation","secondary_identifiers":["GO:0017191"],"synonyms":[{"name":"peptidyl-cysteine N-acetylation","type":"exact"}],"termid":"GO:0018275"}


id: GO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:9442909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development, heterochronic","synonyms":[{"name":"developmental timing","type":"related"},{"name":"heterochronic regulation of development","type":"exact"},{"name":"temporal regulation of development","type":"exact"}],"termid":"GO:0040034"}


id: MOD:01123
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01123. Remap to MOD:01123.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01123 monoiodated tyrosine (obsolete MOD:01123)","termid":"MOD:01123"}


id: PBO:0078187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 3-2 (pseudogene)","termid":"PBO:0078187"}


id: GO:0070649
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104048,112266],"is_not":false,"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:14671023","PMID:16959963","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle assembly","termid":"GO:0030046"},{"relation_name":"is_a","term_name":"formin-nucleated actin cable organization","termid":"GO:0110009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"formin-nucleated actin cable assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formin-nucleated actin cable formation","type":"exact"}],"termid":"GO:0070649","terms_by_termid":{"GO:0070649":null}}


id: PR:Q9UU90
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P/MRP protein subunit POP5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP protein subunit POP5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.09c","secondary_identifiers":["UniProtKB:Q9UU90"],"synonyms":[{"name":"Spom972h-POP5","type":"exact"}],"termid":"PR:Q9UU90"}


id: PBO:0073633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 18, pseudogene","termid":"PBO:0073633"}


id: PATO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (generic)","termid":"PATO:0001730"}


id: GO:0018848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinocarveol = carveol.","definition_xrefs":["UM-BBD_reactionID:r0715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"pinocarveol isomerase activity","secondary_identifiers":["EC:5.5.1.-"],"termid":"GO:0018848"}


id: PBO:0049944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 2","termid":"PBO:0049944"}


id: GO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenylglycerophosphoethanolamine + acyl-CoA = 1-alkenyl-2-acyl-glycerophosphoethanolamine + CoA.","definition_xrefs":["MetaCyc:2.3.1.121-RXN","EC:2.3.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-alkenylglycerophosphoethanolamine O-acyltransferase activity","secondary_identifiers":["RHEA:16245"],"synonyms":[{"name":"acyl-CoA:1-alkenylglycerophosphoethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0047166"}


id: GO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid. The mitochondrial nucleoid is the region of a mitochondrion to which the DNA is confined.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid organization","termid":"GO:0090143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial nucleoid organization","synonyms":[{"name":"mitochondrial nucleoid organisation","type":"exact"}],"termid":"GO:0090144"}


id: SO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting sequence that increases the utilization of (some) eukaryotic promoters, and can function in either orientation and in any location (upstream or downstream) relative to the promoter.","direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer","secondary_identifiers":["http://en.wikipedia.org/wiki/Enhancer_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:enhancer","type":"exact"}],"termid":"SO:0000165"}


id: GO:0010971
data:
  {"annotated_genes":["SJAG_02342","SJAG_04486","SJAG_03067","SJAG_03486","SJAG_01000","SJAG_04332","SJAG_00883","SJAG_03309","SJAG_04597","SJAG_02592","SJAG_03592","SJAG_01805","SJAG_00214","SJAG_00216","SJAG_01901","SJAG_03602","SJAG_00117","SJAG_04140","SJAG_01837","SJAG_00256","SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83513,83522,87260,87677,89429,90000,90040,90183,92004,94163,94739,97543,99314,103119,104487,106281,107154,112571,112763],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[83315,97164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mtg_cell_cycle","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle G2/M phase transition","termid":"GO:1902751"},{"relation_name":"positively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031662"],"synonyms":[{"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle","type":"related"},{"name":"positive regulation of mitotic entry","type":"exact"}],"termid":"GO:0010971","terms_by_termid":{"GO:0010971":null,"GO:1905287":null}}


