# terms

id: PBO:0055047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2462","termid":"PBO:0055047"}


id: FYPO:0000096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cadmium. Cells stop growing (and may die) at a concentration of cadmium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cadmium","synonyms":[{"name":"hypersensitive to cadmium","type":"exact"},{"name":"sensitive to cadmium during mitotic cell cycle","type":"related"},{"name":"sensitive to cadmium during vegetative growth","type":"exact"},{"name":"sensitive to cadmium ions","type":"exact"}],"termid":"FYPO:0000096"}


id: PATO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Haploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haploid","termid":"PATO:0001375"}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: PBO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein (predicted)","termid":"PBO:0004171"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: PBO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D1","termid":"PBO:0045464"}


id: PBO:0028258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3K9me_binding","termid":"PBO:0028258"}


id: GO:0033264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevins, SNAP25 or syntaxin. No detected action on small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bontoxilysin activity (obsolete GO:0033264)","synonyms":[{"name":"BoNT","type":"related"},{"name":"bontoxilysin activity","type":"exact"},{"name":"botulinum neurotoxin activity","type":"exact"}],"termid":"GO:0033264"}


id: MOD:00761
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with one hexose sugar group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"monohexosylated (Hex1)","synonyms":[{"name":"Hex1","type":"exact"}],"termid":"MOD:00761"}


id: PBO:0068542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 148, pseudogene","termid":"PBO:0068542"}


id: SO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Archaeosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaeosine","secondary_identifiers":["RNAMOD:049"],"synonyms":[{"name":"G+","type":"exact"}],"termid":"SO:0001323"}


id: PBO:0061499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 1","termid":"PBO:0061499"}


id: PBO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium permease (predicted)","termid":"PBO:0000626"}


id: PBO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like","termid":"PBO:0048837"}


id: GO:0042726
data:
  {"annotated_genes":["SJAG_04845","SJAG_00491","SJAG_02491","SJAG_00376","SJAG_01054","SJAG_01937","SJAG_00480","SJAG_04711","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[111797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[110164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[113257,111798,82925,96925,102858,106316,110834,102661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin-containing compound metabolism","type":"exact"},{"name":"riboflavin and derivative metabolic process","type":"related"},{"name":"riboflavin and derivative metabolism","type":"related"},{"name":"vitamin B2 and derivative metabolic process","type":"related"},{"name":"vitamin B2 and derivative metabolism","type":"related"}],"termid":"GO:0042726","terms_by_termid":{"GO:0006747":null,"GO:0009231":null,"GO:0009398":null,"GO:0046444":null}}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: PBO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 30","termid":"PBO:0052516"}


id: PBO:0080487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B2","termid":"PBO:0080487"}


id: GO:0034951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-hydroxylaminobenzoate = 3-hydroxyanthranilate.","definition_xrefs":["UM-BBD_reactionID:r1026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"o-hydroxylaminobenzoate mutase activity","secondary_identifiers":["EC:5.4.99.-","MetaCyc:RXN-8846"],"termid":"GO:0034951"}


id: GO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminosalicylate + O2 = cis-4-amino-6-carboxy-2-oxo-hexa-3,5-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-aminosalicylate dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034543"}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity","termid":"GO:0034788"}


id: GO:0001965
data:
  {"annotated_genes":["SJAG_02027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71720],"is_not":false,"summary":null,"term":"GO:0001965"}]},"cv_name":"molecular_function","definition":"Binding to a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-protein alpha-subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-alpha protein subunit binding","type":"exact"}],"termid":"GO:0001965","terms_by_termid":{"GO:0001965":null}}


id: FYPO:0006684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNAs transcribed from the centromeric region is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah","PMID:19111658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002131","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased centromeric transcript binding","synonyms":[{"name":"decreased cen transcript binding","type":"exact"},{"name":"decreased centromeric RNA binding","type":"exact"},{"name":"decreased protein-centromeric transcript interaction","type":"exact"},{"name":"reduced centromeric transcript binding","type":"exact"}],"termid":"FYPO:0006684"}


id: PBO:0059321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 6","termid":"PBO:0059321"}


id: PBO:0074542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal nuclease and tudor domain containing 1","termid":"PBO:0074542"}


id: GO:0010009
data:
  {"annotated_genes":["SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86087],"is_not":false,"summary":null,"term":"GO:0010009"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external leaflet of endosome membrane","type":"exact"},{"name":"external side of endosome membrane","type":"exact"}],"termid":"GO:0010009","terms_by_termid":{"GO:0010009":null}}


id: GO:2001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"positively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"positive regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"positive regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001196"}


id: PBO:0078944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 2-1","termid":"PBO:0078944"}


id: PBO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necdin, MAGE family member","termid":"PBO:0060675"}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["ChEBI:141809","PubMed:23385463","RESID:AA0602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: GO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nodular inflammatory lesions, usually small or granular, firm, persistent, well-structured, and containing compactly grouped T lymphocytes and modified phagocytes such as epithelioid cells, giant cells, and other macrophages. Granuloma formation represents a chronic inflammatory response initiated by various infectious and noninfectious agents. The center of a granuloma consists of fused macrophages, which can become necrotic.","definition_xrefs":["ISBN:0721601464","ISBN:081533642X","GO_REF:0000022","ISBN:068340007X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granuloma formation","termid":"GO:0002432"}


id: GO:0008872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"glucarate dehydratase activity","secondary_identifiers":["RHEA:14573","MetaCyc:GLUCARDEHYDRA-RXN"],"synonyms":[{"name":"D-glucarate dehydratase activity","type":"related"},{"name":"D-glucarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-glucarate hydro-lyase activity","type":"related"}],"termid":"GO:0008872"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: PBO:0091983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa2","termid":"PBO:0091983"}


id: GO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"farnesol biosynthetic process","synonyms":[{"name":"farnesol anabolism","type":"exact"},{"name":"farnesol biosynthesis","type":"exact"},{"name":"farnesol formation","type":"exact"},{"name":"farnesol synthesis","type":"exact"}],"termid":"GO:0006715"}


id: PBO:0028107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall_glycoprotein_glycan","termid":"PBO:0028107"}


id: PBO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_vegetative_growth","termid":"PBO:0036115"}


id: GO:1903366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fear response.","definition_xrefs":["GOC:mr","PMID:8677262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"negatively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fear response","synonyms":[{"name":"down regulation of fear response","type":"exact"},{"name":"down regulation of physiological fear response","type":"exact"},{"name":"down-regulation of fear response","type":"exact"},{"name":"down-regulation of physiological fear response","type":"exact"},{"name":"downregulation of fear response","type":"exact"},{"name":"downregulation of physiological fear response","type":"exact"},{"name":"inhibition of fear response","type":"narrow"},{"name":"inhibition of physiological fear response","type":"narrow"},{"name":"negative regulation of physiological fear response","type":"exact"}],"termid":"GO:1903366"}


id: GO:0102106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloylacetyl-CoA + feruloyl-CoA(4-) + H2O = curcumin + 2 coenzyme A(4-) + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"curcumin synthase activity","secondary_identifiers":["RHEA:34823","MetaCyc:RXN-11226"],"termid":"GO:0102106"}


id: GO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a glioblast into daughter cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glioblast division","termid":"GO:0048860"}


id: PR:P04910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15226425","PMID:21516229","PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.06c","secondary_identifiers":["PR:000027546","UniProtKB:P04910"],"synonyms":[{"name":"SPAC19G12.06C","type":"related"},{"name":"Spom972h-HTA2","type":"exact"}],"termid":"PR:P04910"}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: GO:0044676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three polypeptides which also contains molybdenum, a molybdopterin guanine dinucleotide and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["PMID:8954165","PMID:1915887","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (molybdenum enzyme) complex","termid":"GO:0044676"}


id: FYPO:0005403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is not present. Total telomere length may be normal or abnormal.","definition_xrefs":["PMID:12861005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"telomeric 3' overhang absent during vegetative growth","synonyms":[{"name":"single-stranded telomeric 3' overhang absent during vegetative growth","type":"exact"},{"name":"telomere 3' overhang absent during vegetative growth","type":"exact"},{"name":"telomeric 3' overhang absent during mitotic cell cycle","type":"related"},{"name":"telomeric G-strand overhang absent during vegetative growth","type":"exact"}],"termid":"FYPO:0005403"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","PMID:24415760","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: PBO:0053622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 664","termid":"PBO:0053622"}


id: PBO:0089914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl1","termid":"PBO:0089914"}


id: PBO:0055294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2721","termid":"PBO:0055294"}


id: PBO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase (predicted)","termid":"PBO:0000221"}


id: PBO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Alp3 (predicted)","termid":"PBO:0003623"}


id: FYPO:0001408
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115399],"is_not":false,"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show increased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth at high temperature","termid":"FYPO:0000082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"sensitive to heat shock","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased growth during cellular response to heat shock","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to heat shock","type":"exact"},{"name":"hypersensitive to heat shock","type":"exact"},{"name":"sensitive to heat shock during mitotic cell cycle","type":"related"},{"name":"sensitive to heat shock during vegetative growth","type":"exact"},{"name":"thermo-sensitive","type":"related"},{"name":"thermosensitive","type":"related"}],"termid":"FYPO:0001408","terms_by_termid":{"FYECO:0000117":null,"FYPO:0001408":null}}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: GO:0006285
data:
  {"annotated_genes":["SJAG_02528","SJAG_05257","SJAG_01971","SJAG_02261","SJAG_03724","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73416,90510,91823,97354,102949],"is_not":false,"summary":null,"term":"GO:0006285"},{"annotations":[109955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097510"},{"annotations":[90511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"base-excision repair, AP site formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006285","terms_by_termid":{"GO:0006285":null,"GO:0045007":null,"GO:0097510":null}}


id: GO:0072255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular mesangial cell in the metanephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell development","termid":"GO:0072144"},{"relation_name":"part_of","term_name":"metanephric glomerular mesangial cell differentiation","termid":"GO:0072254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangial cell development","termid":"GO:0072255"}


id: GO:2001080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chitosan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chitosan binding","termid":"GO:2001080"}


id: PBO:0027755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0027755"}


id: PBO:0073393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 7, histone lysine methyltransferase","termid":"PBO:0073393"}


id: GO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"peptide antibiotic catabolic process","synonyms":[{"name":"peptide antibiotic breakdown","type":"exact"},{"name":"peptide antibiotic catabolism","type":"exact"},{"name":"peptide antibiotic degradation","type":"exact"}],"termid":"GO:0030652"}


id: PBO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A transmembrane transporter Bfr1","termid":"PBO:0018135"}


id: GO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a connective tissue over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue development","termid":"GO:0061448"}


id: GO:0016514
data:
  {"annotated_genes":["SJAG_00743","SJAG_04005","SJAG_00735","SJAG_02589","SJAG_01016","SJAG_00739","SJAG_03576","SJAG_02869","SJAG_03579","SJAG_02254","SJAG_00440","SJAG_01111","SJAG_02447","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83115,86105,89127,89638,89759,89777,89834,91563,100852,103326,104374,109150,109166,111068],"is_not":false,"summary":null,"term":"GO:0016514"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:12672490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"SWI/SNF complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SWI-SNF complex","type":"exact"}],"termid":"GO:0016514","terms_by_termid":{"GO:0016514":null}}


id: GO:0160059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a retinoic acid.","definition_xrefs":["PMID:9187263","PMID:17869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to retinoic acid","termid":"GO:0071300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to retinoic acid","synonyms":[{"name":"retinoic acid-induced apoptosis","type":"exact"}],"termid":"GO:0160059"}


id: GO:0009970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfate starvation","synonyms":[{"name":"cellular response to sulphate starvation","type":"exact"}],"termid":"GO:0009970"}


id: PBO:0040086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase F pseudogene 1","termid":"PBO:0040086"}


id: PBO:0050649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 5, pseudogene","termid":"PBO:0050649"}


id: GO:0016254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"part_of","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0042158"],"is_obsolete":false,"name":"preassembly of GPI anchor in ER membrane","synonyms":[{"name":"preassembly of GPI anchor in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0016254"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: FYPO:0002780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is lower than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"decreased ROS accumulation during vegetative growth","type":"related"},{"name":"decreased cellular ROS accumulation during vegetative growth","type":"related"},{"name":"decreased cellular ROS level during vegetative growth","type":"exact"},{"name":"decreased cellular reactive oxygen species accumulation during vegetative growth","type":"related"},{"name":"decreased cellular reactive oxygen species level during mitotic cell cycle","type":"related"},{"name":"reduced cellular ROS level during vegetative growth","type":"exact"},{"name":"reduced cellular reactive oxygen species level during vegetative growth","type":"exact"}],"termid":"FYPO:0002780"}


id: PBO:0109115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 9, His-X-His N1(pi)-histidine","termid":"PBO:0109115"}


id: PBO:0055828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 3","termid":"PBO:0055828"}


id: GO:2000558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunoglobulin production in mucosal tissue.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production in mucosal tissue","termid":"GO:2000557"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production in mucosal tissue","termid":"GO:0002426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production in mucosal tissue","synonyms":[{"name":"positive regulation of antibody production in mucosal tissue","type":"exact"}],"termid":"GO:2000558"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: GO:0007421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomatogastric nervous system over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatogastric nervous system development","termid":"GO:0007421"}


id: PBO:0077542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 254","termid":"PBO:0077542"}


id: PBO:0067438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 559, pseudogene","termid":"PBO:0067438"}


id: PBO:0084133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter with moderate affinity for glucose; induced in the presence of non-fermentable carbon sources, induced by a decrease in growth rate, contains an extended N-terminal domain relative to other HXTs; HXT5 has a paralog, HXT3, that arose from the whole genome duplication","termid":"PBO:0084133"}


id: GO:0048571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that exceeds a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["ISBN:0709408862","GOC:jid","ISBN:0582015952","ISBN:0697037754","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-day photoperiodism","synonyms":[{"name":"response to long-day","type":"exact"},{"name":"response to long-day photoperiod","type":"related"},{"name":"response to short-night","type":"exact"},{"name":"short-night photoperiodism","type":"exact"}],"termid":"GO:0048571"}


id: MOD:01065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein N-terminal amino group to form a Schiff-base or an Amadori ketosamine  (or aminoketose) residue adduct.","definition_xrefs":["Unimod:41#N-term","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose glycated N-terminal","termid":"MOD:01065"}


id: PBO:0076790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectorin beta","termid":"PBO:0076790"}


id: PBO:0044556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DARS1 antisense RNA 1","termid":"PBO:0044556"}


id: PBO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 1","termid":"PBO:0044306"}


id: PBO:0091151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vph2/Vma12","termid":"PBO:0091151"}


id: PBO:0042535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 2","termid":"PBO:0042535"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: PBO:0055574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3010","termid":"PBO:0055574"}


id: PBO:0036138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0036138"}


id: PBO:0086370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; localizes to cytosol; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance","termid":"PBO:0086370"}


id: GO:0075216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"modulation of spore encystment on host","termid":"GO:0075215"},{"relation_name":"positively_regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore encystment on host","termid":"GO:0075216"}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_01831","SJAG_03698","SJAG_03926","SJAG_05019"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83273,103633,103714,113150],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["PMID:12750522","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: GO:0055125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that forms part of the nuclear pore complex, and is required for its correct assembly. In Saccharomyces cerevisiae Nic96 contains Nsp1p, Nup57p, Nup49p, and Nic96p.","definition_xrefs":["PMID:12791264","GOC:jh","PMID:15741174"],"gene_count":0,"genotype_count":0,"name":"obsolete Nic96 complex (obsolete GO:0055125)","synonyms":[{"name":"Nic96 complex","type":"exact"}],"termid":"GO:0055125"}


id: PBO:0028361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_polynucleotide_5'-phosphatase_activity","termid":"PBO:0028361"}


id: GO:0009448
data:
  {"annotated_genes":["SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87232],"is_not":false,"summary":null,"term":"GO:0009448"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-aminobutanoate metabolic process","type":"exact"},{"name":"4-aminobutanoate metabolism","type":"exact"},{"name":"4-aminobutyrate metabolic process","type":"exact"},{"name":"4-aminobutyrate metabolism","type":"exact"},{"name":"GABA metabolic process","type":"exact"},{"name":"GABA metabolism","type":"exact"},{"name":"gamma-aminobutyric acid metabolism","type":"exact"}],"termid":"GO:0009448","terms_by_termid":{"GO:0009448":null}}


id: GO:0017053
data:
  {"annotated_genes":["SJAG_00861","SJAG_03095","SJAG_00958","SJAG_04921","SJAG_00290"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94618,102880,86776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160051"},{"annotations":[86181,104408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses activity that prevents or downregulates transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00290":null,"SJAG_00861":null,"SJAG_00958":null,"SJAG_03095":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription repressor complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090569","GO:0090568"],"synonyms":[{"name":"cytoplasmic transcriptional repressor complex","type":"related"},{"name":"nuclear transcriptional repressor complex","type":"related"},{"name":"transcription factor inhibitor complex","type":"exact"},{"name":"transcriptional repressor complex","type":"exact"}],"termid":"GO:0017053","terms_by_termid":{"GO:0017054":null,"GO:0160051":null}}


id: GO:0010485
data:
  {"annotated_genes":["SJAG_00676","SJAG_02990","SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114636],"is_not":false,"summary":null,"term":"GO:0010485"},{"annotations":[83912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[94708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[83913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[83914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 = CoA + acetyl-histone H4.","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_02990":null,"SJAG_03537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0034212","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"histone H4 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H4 histone acetylase activity","type":"exact"},{"name":"H4 histone acetyltransferase activity","type":"exact"}],"termid":"GO:0010485","terms_by_termid":{"GO:0010485":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0046972":null}}


id: PBO:0057850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3161","termid":"PBO:0057850"}


id: GO:1901906
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine pentaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine pentaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine pentaphosphate metabolism","type":"exact"},{"name":"diadenosyl pentaphosphate metabolic process","type":"exact"},{"name":"diadenosyl pentaphosphate metabolism","type":"exact"}],"termid":"GO:1901906","terms_by_termid":{"GO:1901907":null}}


id: FYPO:0001588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during nitrogen starvation","termid":"FYPO:0001652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased lysine import during nitrogen starvation","synonyms":[{"name":"decreased L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-lysine import during nitrogen starvation","type":"exact"},{"name":"decreased lysine import during nitrogen depletion","type":"exact"},{"name":"decreased lysine import during nitrogen deprivation","type":"exact"},{"name":"decreased lysine import into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine uptake during nitrogen starvation","type":"exact"},{"name":"reduced lysine import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001588"}


id: PBO:0084903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tryptophanyl-tRNA synthetase","termid":"PBO:0084903"}


id: GO:2000822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavioral fear response","synonyms":[{"name":"regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000822"}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: GO:0106083
data:
  {"annotated_genes":["SJAG_01538","SJAG_04558","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98609,92404,108834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[98617,92407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the nuclear membrane.","definition_xrefs":["GOC:lnp","PMID:28356353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear membrane protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106083","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: PBO:0048622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 3","termid":"PBO:0048622"}


id: FYPO:0001573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to rapamycin is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to rapamycin","synonyms":[{"name":"increased RNA accumulation during cellular response to rapamycin","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to rapamycin","type":"narrow"},{"name":"increased transcript level during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0001573"}


id: PBO:0035871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0035871"}


id: GO:0033077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation in thymus","synonyms":[{"name":"T cell development in thymus","type":"related"},{"name":"thymic T cell differentiation","type":"exact"},{"name":"thymocyte cell differentiation","type":"exact"},{"name":"thymocyte differentiation","type":"exact"}],"termid":"GO:0033077"}


id: PBO:0083769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome lid; similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control","termid":"PBO:0083769"}


id: PBO:0030939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrion_inheritance","termid":"PBO:0030939"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: PBO:0074030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18","termid":"PBO:0074030"}


id: GO:0015445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ag+(in) = ADP + phosphate + Ag+(out).","definition_xrefs":["RHEA:14733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silver ion transmembrane transporter activity","termid":"GO:0015080"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type silver transporter activity","secondary_identifiers":["MetaCyc:3.6.3.53-RXN","EC:7.2.2.15"],"synonyms":[{"name":"ATP phosphohydrolase (Ag+-exporting)","type":"related"},{"name":"Ag+-exporting ATPase activity","type":"related"},{"name":"silver exporting ATPase activity","type":"exact"},{"name":"silver transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"silver-exporting ATPase activity","type":"related"}],"termid":"GO:0015445"}


id: PBO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 6","termid":"PBO:0051853"}


id: PBO:0028738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylcysteine_sulfoxide_absent_from_cell","termid":"PBO:0028738"}


id: GO:1903207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903207)","synonyms":[{"name":"regulation of neuron death in response to H2O2","type":"exact"},{"name":"regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903207"}


id: PBO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 3","termid":"PBO:0048627"}


id: PBO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis","termid":"PBO:0030867"}


id: PBO:0027859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027859"}


id: GO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + NADP+ = 5-dehydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.123","RHEA:15001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sorbose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:SORBOSE-5-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01694"],"synonyms":[{"name":"5-keto-D-fructose reductase activity","type":"related"},{"name":"5-ketofructose reductase activity","type":"related"},{"name":"L-sorbose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-linked reductase activity","type":"related"},{"name":"sorbose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0050287"}


id: PBO:0108834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Npr2","termid":"PBO:0108834"}


id: GO:0102105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloylacetyl-CoA + 4-coumaryl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["RHEA:35139","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity from feruloylacetyl-CoA","secondary_identifiers":["EC:2.3.1.219","MetaCyc:RXN-11225"],"termid":"GO:0102105"}


id: GO:0008592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Toll signaling pathway","synonyms":[{"name":"regulation of Tl signaling pathway","type":"exact"},{"name":"regulation of Tl signalling pathway","type":"exact"},{"name":"regulation of Toll signalling pathway","type":"exact"}],"termid":"GO:0008592"}


id: PBO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam11","termid":"PBO:0017041"}


id: PBO:0081621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 550","termid":"PBO:0081621"}


id: PBO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine, mitochondrial","termid":"PBO:0005903"}


id: PR:O13990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgl2 gene.","definition_xrefs":["UniProtKB:O13990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.08c","synonyms":[{"name":"Exo-1,3-beta-glucanase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgl2","type":"exact"}],"termid":"PR:O13990"}


id: PBO:0057032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 127","termid":"PBO:0057032"}


id: SO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxyhydroxymethyl_uridine_methyl_ester is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxyhydroxymethyl_uridine_methyl_ester","secondary_identifiers":["RNAMOD:067"],"synonyms":[{"name":"5-(carboxyhydroxymethyl)uridine methyl ester","type":"exact"},{"name":"five carboxyhydroxymethyl uridine methyl ester","type":"exact"},{"name":"mchm5U","type":"exact"}],"termid":"SO:0001359"}


id: PBO:0053576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 597","termid":"PBO:0053576"}


id: GO:2001065
data:
  {"annotated_genes":["SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114610],"is_not":false,"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to mannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mannan binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoglycan binding","type":"related"}],"termid":"GO:2001065","terms_by_termid":{"GO:2001065":null}}


id: GO:0035457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-alpha stimulus. Interferon-alpha is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-alpha","termid":"GO:0035455"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-alpha","synonyms":[{"name":"cellular response to interferon alfa-n1","type":"related"},{"name":"cellular response to interferon alfa-n3","type":"related"},{"name":"cellular response to leukocyte interferon","type":"exact"},{"name":"cellular response to lymphoblast interferon","type":"exact"},{"name":"cellular response to lymphoblastoid interferon","type":"exact"}],"termid":"GO:0035457"}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: GO:0034400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid found in senescing, formerly green tissues that is derived from a chloroplast that undergoes an organized developmental program of senescence.","definition_xrefs":["PMID:12654863","PMID:24668747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"gerontoplast","termid":"GO:0034400"}


id: GO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a lymphocyte.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte mediated immunity","synonyms":[{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002449"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: PBO:0045913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 9","termid":"PBO:0045913"}


id: GO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antipodal cell differentiation","termid":"GO:0045688"}


id: GO:0010898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:rn","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride metabolic process","termid":"GO:0090208"},{"relation_name":"positively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride catabolic process","synonyms":[{"name":"positive regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010898"}


id: PBO:0091018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase Ryh1","termid":"PBO:0091018"}


id: GO:2001188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001188"}


id: PBO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC13 antisense RNA","termid":"PBO:0050514"}


id: PBO:0029315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029315"}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: PBO:0004542
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sep2","termid":"PBO:0004542"}


id: PATO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of color which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of color","synonyms":[{"name":"high variability of color","type":"exact"}],"termid":"PATO:0001612"}


id: GO:1905897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:aruk","GOC:bc","PMID:21803450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of ER stress response","type":"exact"},{"name":"regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of response to ER stress","type":"exact"}],"termid":"GO:1905897"}


id: PBO:0109476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncated) Wtf1","termid":"PBO:0109476"}


id: GO:0140712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22579286","PMID:22510459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"negative regulation of FNI","type":"broad"},{"name":"negative regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140712"}


id: PBO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 pseudogene 1","termid":"PBO:0052603"}


id: PBO:0109229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF4 pseudogene 1","termid":"PBO:0109229"}


id: PBO:0069603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 880, pseudogene","termid":"PBO:0069603"}


id: GO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"cortisol metabolic process","termid":"GO:0034650"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cortisol biosynthetic process","synonyms":[{"name":"cortisol anabolism","type":"narrow"},{"name":"cortisol biosynthesis","type":"exact"},{"name":"cortisol formation","type":"exact"},{"name":"cortisol synthesis","type":"exact"}],"termid":"GO:0034651"}


id: GO:0034577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylacetanilide + 1/2 O2 = acetanilide + acetone.","definition_xrefs":["UM-BBD_reactionID:r0914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"N-isopropylacetaniline monooxygenase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0034577"}


id: FYPO:0007280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is decreased. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:32012158","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nuclear exosome focus","synonyms":[{"name":"decreased protein localisation to nuclear exosome focus","type":"exact"},{"name":"decreased protein localization to Mmi1 focus","type":"exact"},{"name":"decreased protein localization to Mmi1 nuclear focus complex","type":"exact"},{"name":"decreased protein localization to nuclear exosome foci","type":"exact"},{"name":"decreased protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"reduced protein localization to nuclear exosome focus","type":"exact"}],"termid":"FYPO:0007280"}


id: PBO:0048024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY antisense RNA 1","termid":"PBO:0048024"}


id: PBO:0029335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_phosphorylation","termid":"PBO:0029335"}


id: PR:O60175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein Hikeshi that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein OPI10 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.06c","secondary_identifiers":["UniProtKB:O60175"],"synonyms":[{"name":"Spom972h-C11orf73","type":"exact"}],"termid":"PR:O60175"}


id: PBO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 11","termid":"PBO:0045142"}


id: PBO:0067128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 174, pseudogene","termid":"PBO:0067128"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: PBO:0076723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional and immune response regulator","termid":"PBO:0076723"}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: PR:Q9Y7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.02","synonyms":[{"name":"Spom972h-mcp5","type":"exact"},{"name":"meiotically up-regulated gene 21 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear migration protein num1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J9"}


id: PBO:0057385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548b","termid":"PBO:0057385"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_00597","SJAG_01504","SJAG_00058","SJAG_01315","SJAG_00504","SJAG_05240","SJAG_01870","SJAG_03995","SJAG_00498","SJAG_03427","SJAG_01654","SJAG_05349","SJAG_00147","SJAG_04117","SJAG_04783","SJAG_00322","SJAG_03993","SJAG_00206","SJAG_02279","SJAG_02455","SJAG_02185","SJAG_00363","SJAG_00076","SJAG_00094","SJAG_03112","SJAG_02304","SJAG_05009","SJAG_03547","SJAG_03498","SJAG_00474","SJAG_05025","SJAG_04318","SJAG_01008","SJAG_01452","SJAG_03430","SJAG_03469","SJAG_00602","SJAG_00414","SJAG_03301","SJAG_01810","SJAG_01301","SJAG_00225","SJAG_04898","SJAG_00249","SJAG_03983","SJAG_16453","SJAG_04214","SJAG_04163","SJAG_04911","SJAG_02844","SJAG_02560","SJAG_00577","SJAG_02558","SJAG_00809","SJAG_02722","SJAG_01214","SJAG_02227","SJAG_03210","SJAG_00911","SJAG_03966","SJAG_01152","SJAG_02078","SJAG_00859"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83240,84001,85461,91472,91844,93384,96452,98439,98821,98826,99001,100324,100355,100692,101495,103050,107242,109914,111044,114057,114974],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[109295,93544,106596,87086,101729,90830,114801,99011,97022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[92531,96451,101638,113302,114365,91061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[92532,102276,114366,104681,102421,113303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[104784,84483,85702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[108349,90575,102821,106587,97025,88988,104682,101361,91002,91274,87091,90839,88652,101739,102277,102641,105434,99014,106598,109903,106569,98335,109299,92011,105992,111308,114804,108647,97526,93547,112488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["GOC:mah","PMID:11343900","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03498":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: PBO:0089890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase/aldose 1-epimerase","termid":"PBO:0089890"}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.5","RHEA:21836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03032","MetaCyc:ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: MOD:00595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an manose group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"mannosylated","termid":"MOD:00727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"mannosylated residue","synonyms":[{"name":"ManRes","type":"exact"}],"termid":"MOD:00595"}


id: GO:0033666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont activates, maintains or increases its size or mass or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth or development of symbiont in host (obsolete GO:0033666)","synonyms":[{"name":"positive regulation of growth or development of symbiont in host","type":"exact"},{"name":"positive regulation of growth or development of symbiont within host","type":"exact"},{"name":"positive regulation of invasive growth","type":"broad"},{"name":"up regulation of growth or development of organism within host","type":"exact"},{"name":"up-regulation of growth or development of organism within host","type":"exact"},{"name":"upregulation of growth or development of organism within host","type":"exact"}],"termid":"GO:0033666"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: GO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cinnamic acid ester metabolic process","termid":"GO:0009801"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cinnamic acid ester catabolic process","synonyms":[{"name":"cinnamic acid ester breakdown","type":"exact"},{"name":"cinnamic acid ester catabolism","type":"exact"},{"name":"cinnamic acid ester degradation","type":"exact"}],"termid":"GO:0046282"}


id: GO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycero-3-phosphocholine + H2O = choline phosphate + glycerol + H+.","definition_xrefs":["EC:3.1.4.38","RHEA:19545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"glycerophosphocholine cholinephosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.38-RXN","Reactome:R-HSA-6814797","KEGG_REACTION:R02591"],"synonyms":[{"name":"L-3-glycerylphosphinicocholine cholinephosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phosphocholine cholinephosphohydrolase activity","type":"related"}],"termid":"GO:0047390"}


id: GO:0006873
data:
  {"annotated_genes":["SJAG_04743","SJAG_00792","SJAG_01397","SJAG_02847","SJAG_01541","SJAG_01353","SJAG_00136","SJAG_04096","SJAG_04698","SJAG_04032","SJAG_01669","SJAG_04403","SJAG_00516","SJAG_03516","SJAG_02532","SJAG_04675","SJAG_00802","SJAG_04955","SJAG_01817","SJAG_04584","SJAG_02080","SJAG_00328","SJAG_05294","SJAG_02883","SJAG_02019","SJAG_01004","SJAG_04616","SJAG_02578","SJAG_04677","SJAG_04867","SJAG_04760","SJAG_02474","SJAG_02716","SJAG_03850","SJAG_00532","SJAG_03528","SJAG_00822","SJAG_01007","SJAG_02834","SJAG_00222","SJAG_04167","SJAG_04757","SJAG_03879","SJAG_01129","SJAG_00212","SJAG_01435","SJAG_04892","SJAG_02457","SJAG_03862","SJAG_03793","SJAG_00301","SJAG_01078","SJAG_01694","SJAG_00923","SJAG_04258","SJAG_02023","SJAG_04031","SJAG_02735","SJAG_01913","SJAG_03631","SJAG_03866","SJAG_00668","SJAG_01990","SJAG_01400","SJAG_04607","SJAG_01803","SJAG_04975","SJAG_04111","SJAG_02399","SJAG_02470","SJAG_04028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88010,99618,89728,89736],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[86217,86721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[108325,111145,91358,104580,109980,93827,92499,94046,114663,96791,97412,91127,109388,111623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[88740,91959,113570,103756,95899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[100091,96240,88560,89691,103300,91960,113571,84771,109930,87853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[85735,103480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[99627,95971,90993,113068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[92429,85007,92689,91106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[99628],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89398,89399,97006,98572,91867,100151,110389,85963,95900,99402,90365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[88011,88007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[99621,88012,108791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[96265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[97413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051480"},{"annotations":[83158,109818,83157,94553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[61761,106728,62069,106729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[91329,114813,84819,97421,94657,95758,85348,85675,83502,99745,97772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic ions within a cell. Monatomic ions (also called simple ions) are ions consisting of exactly one atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion homeostasis","termid":"GO:0050801"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00301":null,"SJAG_00328":null,"SJAG_00516":null,"SJAG_00532":null,"SJAG_00668":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00923":null,"SJAG_01004":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01129":null,"SJAG_01353":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_01694":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02080":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02470":null,"SJAG_02474":null,"SJAG_02532":null,"SJAG_02578":null,"SJAG_02716":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02847":null,"SJAG_02883":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03862":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04096":null,"SJAG_04111":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04403":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04616":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04698":null,"SJAG_04743":null,"SJAG_04757":null,"SJAG_04760":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04955":null,"SJAG_04975":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular ion homeostasis","type":"broad"},{"name":"cellular monoatomic ion homeostasis","type":"exact"}],"termid":"GO:0006873","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006880":null,"GO:0006882":null,"GO:0007035":null,"GO:0010106":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030641":null,"GO:0032468":null,"GO:0033214":null,"GO:0033215":null,"GO:0051453":null,"GO:0051480":null,"GO:0098711":null}}


id: PR:Q1MTR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.11c gene.","definition_xrefs":["UniProtKB:Q1MTR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent helicase irc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.11c","synonyms":[{"name":"Spom972h-SPBC11C11.11c","type":"exact"}],"termid":"PR:Q1MTR1"}


id: PBO:0055664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 1","termid":"PBO:0055664"}


id: GO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate.","definition_xrefs":["EC:4.1.3.3","RHEA:23296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetylneuraminate lyase activity","secondary_identifiers":["KEGG_REACTION:R01811","MetaCyc:RXN0-7390","Reactome:R-HSA-4085217"],"synonyms":[{"name":"N-acetylneuraminate aldolase activity","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase (N-acetyl-D-mannosamine-forming)","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"N-acetylneuraminic acid aldolase activity","type":"related"},{"name":"N-acetylneuraminic acid lyase activity","type":"related"},{"name":"N-acetylneuraminic aldolase activity","type":"related"},{"name":"N-acetylneuraminic lyase activity","type":"related"},{"name":"NALase activity","type":"related"},{"name":"NANA lyase activity","type":"related"},{"name":"NPL","type":"related"},{"name":"acetylneuraminate lyase activity","type":"related"},{"name":"acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"neuraminate aldolase activity","type":"related"},{"name":"neuraminic acid aldolase activity","type":"related"},{"name":"neuraminic aldolase activity","type":"related"},{"name":"sialate lyase activity","type":"related"},{"name":"sialic acid aldolase activity","type":"related"},{"name":"sialic aldolase activity","type":"related"}],"termid":"GO:0008747"}


id: PBO:0013112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1 homolog Oga1","termid":"PBO:0013112"}


id: PBO:0040603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B melanoma antigen","termid":"PBO:0040603"}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: PBO:0075812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 1","termid":"PBO:0075812"}


id: PBO:0055992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and WD repeat domain containing 1","termid":"PBO:0055992"}


id: PBO:0082542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein of unknown function; localizes to the cytoplasm; deletion improves xylose fermentation in industrially engineered strains; YLR042C is not an essential gene","termid":"PBO:0082542"}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: PBO:0081730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 660","termid":"PBO:0081730"}


id: PBO:0040695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit alpha","termid":"PBO:0040695"}


id: GO:0102586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + 1-O-sinapoyl-beta-D-glucose = cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6'-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside] sinapoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15332"],"termid":"GO:0102586"}


id: FYPO:0003614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable meiotic spindle during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle absent from cell during meiosis","termid":"FYPO:0006391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000120","FYPO:0001985","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"meiotic spindle absent from cell during meiosis II","synonyms":[{"name":"absent meiotic spindle during meiosis II","type":"exact"},{"name":"meiosis II spindle absent","type":"exact"},{"name":"meiotic spindle absent from cell during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003614"}


id: GO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + A = AH(2) + pyruvate.","definition_xrefs":["RHEA:15089","EC:1.1.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-2-hydroxy-acid dehydrogenase activity","secondary_identifiers":["MetaCyc:D-2-HYDROXY-ACID-DEHYDROGENASE-RXN","KEGG_REACTION:R00297"],"synonyms":[{"name":"(R)-2-hydroxy-acid:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy acid dehydrogenase activity","type":"related"}],"termid":"GO:0047809"}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: GO:0098735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force of heart muscle contraction.","definition_xrefs":["GOC:BHF","GOC:dos","GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:17242280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction","termid":"GO:0098735"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["GOC:dph","ISBN:0198542771","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: FYPO:0002667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"decreased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"reduced peptide-serine-N-acetyltransferase activity","type":"exact"}],"termid":"FYPO:0002667"}


id: GO:0006050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine metabolic process","synonyms":[{"name":"mannosamine metabolism","type":"exact"}],"termid":"GO:0006050"}


id: PBO:0058602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6734","termid":"PBO:0058602"}


id: FYPO:0004697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,2-dioctanoyl-sn-glycerol (DiC8 DAG). Cells stop growing (and may die) at a concentration of 1,2-dioctanoyl-sn-glycerol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 1,2-dioctanoyl-sn-glycerol","synonyms":[{"name":"hypersensitive to 1,2-dioctanoyl-sn-glycerol","type":"exact"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during vegetative growth","type":"exact"},{"name":"sensitive to DiC8 DAG","type":"exact"}],"termid":"FYPO:0004697"}


id: PBO:0049218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 2","termid":"PBO:0049218"}


id: PBO:0066102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS and EF-hand domain containing","termid":"PBO:0066102"}


id: GO:2000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peroxidase activity","synonyms":[{"name":"regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of oxyperoxidase activity","type":"exact"},{"name":"regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000468"}


id: GO:0140065
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94710],"is_not":false,"summary":null,"term":"GO:0140065"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: butyryl-CoA + lysine in peptide = CoA + N-butyryl-lysine-peptide.","definition_xrefs":["PMID:27105113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"peptide butyryltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53912"],"synonyms":[{"name":"protein butyryltransferase activity","type":"related"}],"termid":"GO:0140065","terms_by_termid":{"GO:0140065":null}}


id: PBO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with_condition","termid":"PBO:0034238"}


id: GO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-8 activity (obsolete GO:0004205)","synonyms":[{"name":"caspase-8 activity","type":"exact"}],"termid":"GO:0004205"}


id: MOD:00930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"tyrosine adduct with substrate analog inhibitor 1,2-dideoxy-2'-methyl-alpha-D-glucopyranoso-[2,1-d]-Delta2'-thiazoline.","definition_xrefs":["PubMed:15795231","Unimod:514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propyl-NAG tyrosine adduct","termid":"MOD:00930"}


id: SO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for H_ACA_box_snoRNA. Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_gene","synonyms":[{"name":"box H/ACA snoRNA gene, H ACA box snoRNA gene, H/ACA box snoRNA gene","type":"exact"}],"termid":"SO:0002376"}


id: PBO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn2","termid":"PBO:0000880"}


id: PBO:0043169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage intermediate layer protein 2","termid":"PBO:0043169"}


id: PBO:0057565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 760","termid":"PBO:0057565"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: PBO:0075665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1","termid":"PBO:0075665"}


id: PBO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2433","termid":"PBO:0055018"}


id: PBO:0090135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2","termid":"PBO:0090135"}


id: GO:0036424
data:
  {"annotated_genes":["SJAG_04449","SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96013,106084],"is_not":false,"summary":null,"term":"GO:0036424"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + H2O = L-serine + phosphate, on a free amino acid.","definition_xrefs":["RHEA:21208","PMID:25037224","PMID:9188776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"L-phosphoserine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.3","KEGG_REACTION:R00582","MetaCyc:PSERPHOSPHA-RXN","GO:0004647","MetaCyc:RXN0-5114","Reactome:R-HSA-977324"],"synonyms":[{"name":"O-phosphoserine phosphohydrolase activity","type":"related"},{"name":"phosphoserine phosphatase activity","type":"related"}],"termid":"GO:0036424","terms_by_termid":{"GO:0036424":null}}


id: GO:0019636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonoacetate, C2H4PO5, a substance composed of an acetate and a phosphonic acid residue.","definition_xrefs":["MetaCyc:P483-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phosphonoacetate metabolic process","synonyms":[{"name":"phosphonoacetate metabolism","type":"exact"}],"termid":"GO:0019636"}


id: _global:occupancy
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"A number representing what proportion of copies of the protein have the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupancy","termid":"_global:occupancy"}


id: PBO:0072568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras responsive element binding protein 1","termid":"PBO:0072568"}


id: PBO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1","termid":"PBO:0045306"}


id: PATO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a spindle-like shape that is wide in the middle and tapers at both ends.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle-shaped","termid":"PATO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusiform","termid":"PATO:0002400"}


id: PBO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA","termid":"PBO:0048450"}


id: PBO:0090967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1","termid":"PBO:0090967"}


id: GO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate","synonyms":[{"name":"circadian regulation of heart contraction rate","type":"related"}],"termid":"GO:0003053"}


id: PR:Q9USV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf7 gene.","definition_xrefs":["UniProtKB:Q9USV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.04c","synonyms":[{"name":"Spom972h-cwf7","type":"exact"},{"name":"complexed with cdc5 protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"splicing factor 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV3"}


id: PBO:0042127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 201","termid":"PBO:0042127"}


id: GO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in replicative cell aging (obsolete GO:0001322)","synonyms":[{"name":"age-dependent response to oxidative stress during replicative cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during replicative cell aging","type":"related"}],"termid":"GO:0001322"}


id: GO:0110144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a magnetosome, a membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria.","definition_xrefs":["GOC:aa","PMID:27620945"],"gene_count":0,"genotype_count":0,"name":"obsolete magnetosome part (obsolete GO:0110144)","termid":"GO:0110144"}


id: GO:1904476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of small GTPase binding.","definition_xrefs":["PMID:15798216","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of small GTPase binding","termid":"GO:1904475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small GTPase binding","synonyms":[{"name":"down regulation of small GTPase binding","type":"exact"},{"name":"down-regulation of Ras GTPase binding","type":"exact"},{"name":"downregulation of small GTPase binding","type":"exact"},{"name":"inhibition of small GTPase binding","type":"exact"},{"name":"negative regulation of Ras GTPase binding","type":"narrow"}],"termid":"GO:1904476"}


id: PBO:0089989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23b","termid":"PBO:0089989"}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["UniProtKB:Q09858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: PBO:0049199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 1","termid":"PBO:0049199"}


id: PBO:0081325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114 pseudogene 1","termid":"PBO:0081325"}


id: PBO:0087963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter; member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to the siderophore triacetylfusarinine C","termid":"PBO:0087963"}


id: PBO:0031185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_thiamine_level","termid":"PBO:0031185"}


id: PBO:0048236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 5","termid":"PBO:0048236"}


id: PBO:0041610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 39 pseudogene 1","termid":"PBO:0041610"}


id: PBO:0040397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit F","termid":"PBO:0040397"}


id: PBO:0109938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, small-subunit processome Dhx37","termid":"PBO:0109938"}


id: PBO:0073990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 4","termid":"PBO:0073990"}


id: PBO:0048306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 16","termid":"PBO:0048306"}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: _global:capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"_global:capable_of_part_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","secondary_identifiers":["RO:0002215"],"termid":"_global:capable_of"}


id: PBO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 15","termid":"PBO:0071820"}


id: PBO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily U member 1","termid":"PBO:0052219"}


id: PR:O14362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biosynthesis/cell cycle regulator smi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.17c","synonyms":[{"name":"Spom972h-smi1","type":"exact"}],"termid":"PR:O14362"}


id: PBO:0076697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator 1 like","termid":"PBO:0076697"}


id: PBO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region, candidate 3","termid":"PBO:0042689"}


id: GO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"platelet degranulation","synonyms":[{"name":"platelet exocytosis","type":"exact"}],"termid":"GO:0002576"}


id: GO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to removal of necrotic debris that contribute to an inflammatory response.","definition_xrefs":["ISBN:0721601871","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of damaged tissue involved in inflammatory response wound healing","synonyms":[{"name":"clearance of damaged tissue during inflammatory response","type":"related"}],"termid":"GO:0002247"}


id: GO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with beta-endorphin, and transmitting the signal across the membrane by activating an associated G-protein. Beta-endorphin is a peptide, 31 amino acids long, resulting from processing of the precursor proopiomelanocortin (POMC).","definition_xrefs":["Wikipedia:Beta-endorphin","GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta-endorphin receptor activity","synonyms":[{"name":"mu-opioid receptor activity","type":"related"}],"termid":"GO:0004979"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0046614","GO:0007327"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: FYPO:0008003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein at a site of mechanical stress on the cell surface is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to site of mechanical stress","termid":"FYPO:0008003"}


id: FYPO:0005534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in telomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"},{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at telomere during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at telomere during mitotic cell cycle","type":"related"},{"name":"reduced histone H4-K16 acetylation at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005534"}


id: GO:0106419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-lipoyl-L-lysyl-[protein] + H2O + NAD+ = 2''-O-lipoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:63640","PMID:25525879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"NAD-dependent protein lipoamidase activity","termid":"GO:0106419"}


id: GO:0034314
data:
  {"annotated_genes":["SJAG_03455","SJAG_04100","SJAG_01732","SJAG_01268","SJAG_01384","SJAG_02075","SJAG_02228","SJAG_03086","SJAG_01964","SJAG_04479","SJAG_02245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83620,86193,93631,94566,95416,95603,98537,99126,101002,103043],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[86402],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.","definition_xrefs":["PMID:18640983","PMID:16959963","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament branch nucleation","type":"exact"},{"name":"branched actin filament nucleation","type":"exact"}],"termid":"GO:0034314","terms_by_termid":{"GO:0034314":null,"GO:0034316":null}}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: GO:1905638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["PMID:27122350","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"negatively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"down regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"down-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"downregulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"inhibition of mitochondrial mRNA catabolic process","type":"narrow"}],"termid":"GO:1905638"}


id: GO:0021638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve formation","synonyms":[{"name":"CN V biosynthesis","type":"related"},{"name":"CN V formation","type":"related"}],"termid":"GO:0021638"}


id: PR:Q10147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.04","secondary_identifiers":["UniProtKB:Q10147"],"synonyms":[{"name":"CCT-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT2","type":"exact"},{"name":"TCP-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10147"}


id: PBO:0057586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891a","termid":"PBO:0057586"}


id: SO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"VIPER retrotransposons are members of the YR_retrotransposon (SO:0002286 superfamily with protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in VIPER are arranged in A-pol-B-A-B order where A and B represent ITRs. VIPER is only found in kinetoplastida genomes.","definition_xrefs":["PMID:16297462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Viper_YR_retrotransposon","synonyms":[{"name":"RYV retrotransposon","type":"exact"},{"name":"Viper YR retrotransposon","type":"exact"},{"name":"Viper retrotransposon","type":"exact"}],"termid":"SO:0002289"}


id: PBO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 64","termid":"PBO:0071458"}


id: PBO:0081217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMIZ1 antisense RNA 1","termid":"PBO:0081217"}


id: GO:1901463
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"regulation of tetrapyrrole anabolism","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"regulation of tetrapyrrole formation","type":"exact"},{"name":"regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901463"}


id: GO:0061705
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, to yield fructose-6-phosphate through both glucose and fructose intermediates.","definition_xrefs":["MetaCyc:PWY-621","GOC:dph","PMID:15012287","GOC:glycolysis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate through glucose and fructose","termid":"GO:0061705"}


id: GO:0009500
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicluster bacterial-type ferredoxin (obsolete GO:0009500)","synonyms":[{"name":"dicluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009500"}


id: GO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075177)","synonyms":[{"name":"modulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"modulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075177"}


id: PBO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_methyltransferase_activity","termid":"PBO:0035940"}


id: PBO:0090517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER metallopeptidase Erm1","termid":"PBO:0090517"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: FYPO:0006564
data:
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id: PBO:0056582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter","termid":"PBO:0056582"}


id: GO:0015929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of hexosamine or N-acetylhexosamine residues (e.g. N-acetylglucosamine) residues from gangliosides or other glycoside oligosaccharides.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"hexosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.52-RXN"],"termid":"GO:0015929"}


id: PBO:0067383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 487, pseudogene","termid":"PBO:0067383"}


id: GO:0000274
data:
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id: GO:0005515
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id: PBO:0072925
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id: FYPO:0006456
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id: PBO:0041009
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id: GO:0000940
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id: PBO:0006174
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id: PBO:0014619
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-dependent kinase kinase 2","termid":"PBO:0014619"}


id: GO:0043732
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotinate + H2O + O2 = 2,6-dihydroxynicotinate + H2O2.","definition_xrefs":["RHEA:22808","EC:1.17.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-hydroxynicotinate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7585","KEGG_REACTION:R07221"],"synonyms":[{"name":"6-hydroxynicotinate hydroxylase activity","type":"related"},{"name":"6-hydroxynicotinate:O2 oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic acid dehydrogenase activity","type":"related"},{"name":"6-hydroxynicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0043732"}


id: GO:0052772
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id: PBO:0038922
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id: PBO:0058913
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id: PBO:0004783
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  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YJR086W is not functional ortholog","termid":"PBO:0004783"}


id: PBO:0111313
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II 3' end processing-associated factor","termid":"PBO:0111313"}


id: SO:0001037
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id: FYPO:0001849
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id: GO:2000866
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id: GO:1900558
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving austinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol metabolic process","synonyms":[{"name":"austinol metabolism","type":"exact"}],"termid":"GO:1900558"}


id: FYPO:0002413
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id: GO:0006176
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id: PBO:0067610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 782, pseudogene","termid":"PBO:0067610"}


id: PBO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.23","termid":"PBO:0005012"}


id: GO:0010711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"negatively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen catabolic process","synonyms":[{"name":"down regulation of collagen catabolic process","type":"exact"},{"name":"down-regulation of collagen catabolic process","type":"exact"},{"name":"downregulation of collagen catabolic process","type":"exact"},{"name":"inhibition of collagen catabolic process","type":"narrow"},{"name":"negative regulation of collagen breakdown","type":"exact"},{"name":"negative regulation of collagen catabolism","type":"exact"},{"name":"negative regulation of collagen degradation","type":"exact"}],"termid":"GO:0010711"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: PBO:0081380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 221","termid":"PBO:0081380"}


id: PBO:0091333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. crassa Pzl1","termid":"PBO:0091333"}


id: PBO:0085863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has an apparent role in acetylation of N-terminal methionine residues","termid":"PBO:0085863"}


id: PBO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036098"}


id: GO:1903712
data:
  {"annotated_genes":["SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63382,109737,115093],"is_not":false,"summary":null,"term":"GO:1903712"}]},"cv_name":"biological_process","definition":"The directed movement of cysteine across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:17435223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"cysteine transport","termid":"GO:0042883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cysteine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903712","terms_by_termid":{"GO:1903712":null}}


id: PBO:0091044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Aut12","termid":"PBO:0091044"}


id: GO:0097080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane.","definition_xrefs":["PMID:20861301","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"plasma membrane selenite transport","synonyms":[{"name":"plasma membrane hydrogenselenite transport","type":"exact"}],"termid":"GO:0097080"}


id: PBO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isochromosome_formation","termid":"PBO:0030463"}


id: GO:1900274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipase C activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipase C activity","synonyms":[{"name":"regulation of lecithinase C activity","type":"related"},{"name":"regulation of lipophosphodiesterase C","type":"related"},{"name":"regulation of phosphatidase C","type":"related"}],"termid":"GO:1900274"}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: GO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"butyrate metabolic process","secondary_identifiers":["GO:0043437"],"synonyms":[{"name":"butanoic acid metabolic process","type":"exact"},{"name":"butanoic acid metabolism","type":"exact"},{"name":"butyrate metabolism","type":"exact"},{"name":"butyric acid metabolic process","type":"exact"},{"name":"butyric acid metabolism","type":"exact"}],"termid":"GO:0019605"}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: FYPO:0007337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 methylation at centromere","type":"exact"},{"name":"increased histone H3-K4 methylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 methylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 methylation at centromere","type":"exact"},{"name":"increased histone H3K4me at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at centromere","type":"exact"}],"termid":"FYPO:0007337"}


id: PBO:0074987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-29","termid":"PBO:0074987"}


id: FYPO:0004617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete increased rate of microtubule depolymerization at minus end (obsolete FYPO:0004617)","synonyms":[{"name":"decreased microtubule stability","type":"related"},{"name":"increased microtubule depolymerization rate at minus end","type":"exact"},{"name":"increased microtubule minus end shrinkage","type":"related"},{"name":"increased rate of microtubule catastrophe at minus end","type":"related"},{"name":"increased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"increased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"increased rate of minus-end specific microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004617"}


id: PBO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDST1 antisense RNA 1","termid":"PBO:0060686"}


id: GO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of petal number","termid":"GO:0048834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of increased petal number","termid":"GO:0048836"}


id: GO:0004177
data:
  {"annotated_genes":["SJAG_00969","SJAG_03744","SJAG_00181","SJAG_01896","SJAG_02033","SJAG_01088","SJAG_06636","SJAG_03022"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83983],"is_not":false,"summary":null,"term":"GO:0004177"},{"annotations":[105981,99102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004239"},{"annotations":[93555,89009,99104,83985,83719,105983,110507,101623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain.","definition_xrefs":["PMID:24157837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03022":null,"SJAG_03744":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008233","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"aminopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.4.11.-","Reactome:R-HSA-2534096","Reactome:R-HSA-983162","Reactome:R-HSA-8851929","MetaCyc:RXN0-5052","Reactome:R-HSA-1236954"],"termid":"GO:0004177","terms_by_termid":{"GO:0004177":null,"GO:0004239":null,"GO:0070006":null}}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: PBO:0067247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 320, pseudogene","termid":"PBO:0067247"}


id: PBO:0042354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD96 molecule","termid":"PBO:0042354"}


id: PBO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C (predicted)","termid":"PBO:0004825"}


id: GO:1900701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of orcinol biosynthetic process","synonyms":[{"name":"regulation of orcinol anabolism","type":"exact"},{"name":"regulation of orcinol biosynthesis","type":"exact"},{"name":"regulation of orcinol formation","type":"exact"},{"name":"regulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900701"}


id: PBO:0089679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0089679"}


id: PBO:0057603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 940","termid":"PBO:0057603"}


id: PBO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 6","termid":"PBO:0071708"}


id: PBO:0041171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4 pseudogene 1","termid":"PBO:0041171"}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: GO:0003778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete dynactin motor (obsolete GO:0003778)","synonyms":[{"name":"dynactin motor","type":"exact"}],"termid":"GO:0003778"}


id: GO:0031878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 somatostatin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 somatostatin receptor binding","synonyms":[{"name":"type 1 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031878"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: GO:0052120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host environment (obsolete GO:0052120)","synonyms":[{"name":"positive aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052120"}


id: GO:0141170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway.","definition_xrefs":["PMID:36478523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141170"}


id: PBO:0048958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit beta","termid":"PBO:0048958"}


id: PBO:0110398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE4 pseudogene 1","termid":"PBO:0110398"}


id: PATO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001101 stiffness value (obsolete PATO:0001101)","termid":"PATO:0001101"}


id: MOD:00070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-methyl-L-alanine.","definition_xrefs":["PubMed:323502","PubMed:7007074","RESID:AA0061","ChEBI:17519","PubMed:337304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-alanine","synonyms":[{"name":"(2S)-2-methylaminopropanoic acid","type":"exact"},{"name":"2-methylazanylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-alanine","type":"exact"},{"name":"N-methylalanine","type":"exact"},{"name":"N-methylated L-alanine","type":"exact"},{"name":"NMe1Ala","type":"exact"}],"termid":"MOD:00070"}


id: PATO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acceleration","termid":"PATO:0001028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular acceleration","termid":"PATO:0001350"}


id: PR:O74830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1183.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C1183.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.02","synonyms":[{"name":"Spom972h-SPCC1183.02","type":"exact"}],"termid":"PR:O74830"}


id: PBO:0086908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; YPQ1 has a paralog, RTC2, that arose from the whole genome duplication","termid":"PBO:0086908"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: GO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the extracellular matrix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular matrix assembly","termid":"GO:0085029"}


id: FYPO:0001594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of asparagine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal asparagine import","termid":"FYPO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased asparagine import","synonyms":[{"name":"decreased L-asparagine import","type":"exact"},{"name":"decreased L-asparagine import across plasma membrane","type":"exact"},{"name":"decreased asparagine import during mitotic cell cycle","type":"related"},{"name":"decreased asparagine import during vegetative growth","type":"exact"},{"name":"decreased asparagine import into cell","type":"exact"},{"name":"decreased asparagine uptake","type":"exact"},{"name":"reduced asparagine import","type":"exact"}],"termid":"FYPO:0001594"}


id: PBO:0066578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 2","termid":"PBO:0066578"}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: PBO:0028949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip","termid":"PBO:0028949"}


id: GO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.","definition_xrefs":["MetaCyc:MGLDLCTANA-PWY","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde","synonyms":[{"name":"D-lactate anabolism from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate formation from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate synthesis from methylglyoxal via (R)-lactaldehyde","type":"exact"}],"termid":"GO:0019248"}


id: PBO:0073868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 4","termid":"PBO:0073868"}


id: PBO:0091009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2","termid":"PBO:0091009"}


id: GO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039570)","synonyms":[{"name":"cytoplasmic sequestering of STAT2","type":"exact"},{"name":"cytoplasmic sequestration of STAT2","type":"exact"}],"termid":"GO:0039570"}


id: SO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_cyano_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_cyano_seven_deazaguanosine","secondary_identifiers":["RNAMOD:047"],"synonyms":[{"name":"7-cyano-7-deazaguanosine","type":"exact"},{"name":"preQ0","type":"exact"},{"name":"seven cyano seven deazaguanosine","type":"exact"}],"termid":"SO:0001321"}


id: PR:Q9P7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0390 protein C24B10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.18","synonyms":[{"name":"Spom972h-SPCC24B10.18","type":"exact"}],"termid":"PR:Q9P7I8"}


id: GO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription regulator activity (obsolete GO:0090047)","synonyms":[{"name":"positive regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090047"}


id: MOD:00094
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine amide.","definition_xrefs":["RESID:AA0085","PubMed:7149738","PubMed:1892838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine amide","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanamide","type":"exact"},{"name":"2-amino-3-mercaptopropanamide","type":"exact"},{"name":"CysN","type":"exact"},{"name":"L-cysteine amide","type":"exact"},{"name":"MOD_RES Cysteine amide","type":"exact"},{"name":"amidated L-cysteine","type":"exact"},{"name":"cysteinamide","type":"exact"}],"termid":"MOD:00094"}


id: GO:0160128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic ion by a channel that opens in response to a change in proton concentration (pH).","definition_xrefs":["PMID:29513651","PMID:17167423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"pH-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-2671885","Wikipedia:Acid-sensing_ion_channel"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"related"},{"name":"proton-gated ion channel activity","type":"exact"}],"termid":"GO:0160128"}


id: GO:1902393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of deoxyribonuclease activity","termid":"GO:0032076"},{"relation_name":"is_a","term_name":"regulation of exodeoxyribonuclease activity","termid":"GO:1902392"},{"relation_name":"is_a","term_name":"negative regulation of exonuclease activity","termid":"GO:1905778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of exodeoxyribonuclease activity","synonyms":[{"name":"down regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of exodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of exodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:1902393"}


id: PBO:0029495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_cell_cycle_phase","termid":"PBO:0029495"}


id: PBO:0077670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF14 antisense RNA 1","termid":"PBO:0077670"}


id: PBO:0013030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu66","termid":"PBO:0013030"}


id: GO:0103016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H+ + a tRNA uridine34 + a [TusE sulfur carrier protein]-S-sulfanylcysteine = AMP + diphosphoric acid + a tRNA 2-thiouridine34 + a [TusE sulfur carrier protein]-L-cysteine.","definition_xrefs":["PMID:12949933","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"tRNA-specific 2-thiouridylase activity","secondary_identifiers":["MetaCyc:RXN0-2023"],"termid":"GO:0103016"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: PBO:0047343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 1","termid":"PBO:0047343"}


id: GO:1902956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:23530063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902956"}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: PBO:0016916
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0016916"}


id: PBO:0085713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085713"}


id: GO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell activation","synonyms":[{"name":"activation of myeloid dendritic cell activation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell activation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell activation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell activation","type":"exact"},{"name":"upregulation of myeloid dendritic cell activation","type":"exact"}],"termid":"GO:0030887"}


id: PBO:0085586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in assembly and export of the large ribosomal subunit; nucleolar protein; constituent of 66S pre-ribosomal particles; contains a sigma(70)-like motif, which is thought to bind RNA","termid":"PBO:0085586"}


id: PATO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern quality inhering in a bearer by virtue of the bearer's color pattern in which light and dark colors (for example white and black) are codistributed to create a visual impression.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high contrast color pattern","termid":"PATO:0002275"}


id: GO:1901115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of erythromycin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00240","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"erythromycin metabolic process","termid":"GO:1901113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"erythromycin biosynthetic process","synonyms":[{"name":"erythromycin anabolism","type":"exact"},{"name":"erythromycin biosynthesis","type":"exact"},{"name":"erythromycin formation","type":"exact"},{"name":"erythromycin synthesis","type":"exact"}],"termid":"GO:1901115"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: GO:0034826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-1,2,5,6,7,8-hexahydronaphthalene + NAD+ = 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxy-1,2,5,6,7,8-hexyhadronaphthalene dehydrogenase activity","termid":"GO:0034826"}


id: GO:0106037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the middle of the apical edge of a cell.","definition_xrefs":["PMID:23831726","PMID:28263180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"apicomedial cortex","synonyms":[{"name":"medioapical cortex","type":"exact"}],"termid":"GO:0106037"}


id: PBO:0062950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1","termid":"PBO:0062950"}


id: PBO:0041669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 2","termid":"PBO:0041669"}


id: PBO:0017564
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUclear Pore factor","termid":"PBO:0017564"}


id: PBO:0111517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 78","termid":"PBO:0111517"}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: GO:0061703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an assemble of ASC dimers that is capable of inducing pyroptosis.","definition_xrefs":["PMID:17599095","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyroptosome complex","synonyms":[{"name":"ASC pyroptosome","type":"exact"}],"termid":"GO:0061703"}


id: GO:1990751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a Schwann cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell migration","termid":"GO:0036135"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell chemotaxis","termid":"GO:1990751"}


id: PR:G2TRT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.12 gene.","definition_xrefs":["UniProtKB:G2TRT1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor C1348.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.12","synonyms":[{"name":"Spom972h-SPBC1348.12","type":"exact"}],"termid":"PR:G2TRT1"}


id: PBO:0072774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A3, pseudogene","termid":"PBO:0072774"}


id: GO:0102371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betulin + NADPH(4-) + H+ + O2 = betulinic aldehyde + NADP(3-) + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"betulin dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13498"],"termid":"GO:0102371"}


id: PR:Q10357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper chaperone for superoxide dismutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.04","secondary_identifiers":["UniProtKB:Q10357"],"synonyms":[{"name":"SPAC22E12.04","type":"related"},{"name":"Spom972h-CCS","type":"exact"},{"name":"pccs","type":"related"}],"termid":"PR:Q10357"}


id: GO:0032681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of lymphotoxin A production","secondary_identifiers":["GO:0043016"],"synonyms":[{"name":"regulation of LTA production","type":"exact"},{"name":"regulation of TNF-beta production","type":"exact"},{"name":"regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"regulation of lymphotoxin-alpha production","type":"exact"},{"name":"regulation of tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032681"}


id: GO:0016798
data:
  {"annotated_genes":["SJAG_01971","SJAG_00667","SJAG_02131","SJAG_01028","SJAG_03824","SJAG_03057","SJAG_02799","SJAG_04327","SJAG_00620","SJAG_04851","SJAG_02949","SJAG_05272","SJAG_04859","SJAG_03295","SJAG_00096","SJAG_03032","SJAG_00957","SJAG_03646","SJAG_04850","SJAG_02179","SJAG_04363","SJAG_02192","SJAG_00485","SJAG_04864","SJAG_01888","SJAG_02076","SJAG_01883","SJAG_01171","SJAG_04789","SJAG_02718","SJAG_00310","SJAG_01858","SJAG_04184","SJAG_01119","SJAG_02435","SJAG_03280","SJAG_04301","SJAG_05001","SJAG_01781","SJAG_02446","SJAG_03724","SJAG_02261","SJAG_01974","SJAG_03444","SJAG_02590","SJAG_02478","SJAG_03213","SJAG_01017","SJAG_02711","SJAG_02528","SJAG_04927","SJAG_02649","SJAG_04238","SJAG_01029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101343],"is_not":false,"summary":null,"term":"GO:0016798"},{"annotations":[91827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[91828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[73417,90515,91829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[97357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003905"},{"annotations":[107475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"},{"annotations":[83083,91792,83082,91791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[90487,100008,110051,104994,114423,99834,90881,84643,113872,89684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004556"},{"annotations":[96105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"},{"annotations":[82829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090599"},{"annotations":[83780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[112207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004564"},{"annotations":[111693,104307,82904,95889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[97293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004568"},{"annotations":[112186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070694"},{"annotations":[97359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[97360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[97361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"},{"annotations":[82831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[95528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[99118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[84591,107278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[90763,95890,89654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[89655,95891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"},{"annotations":[89656,95892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052862"},{"annotations":[103982,97738,97739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[103983,83756,97740,90764,97741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[86117,89843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015926"},{"annotations":[93963,102573,84183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004553"},{"annotations":[97380,97381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"},{"annotations":[98045,98035,114858,92626,98044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[66680,91388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"},{"annotations":[86175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070635"},{"annotations":[86176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070636"},{"annotations":[91832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008534"},{"annotations":[91833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000703"},{"annotations":[86177,108153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008477"},{"annotations":[90518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"},{"annotations":[94319,94320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106432"},{"annotations":[97382,97383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044654"},{"annotations":[112208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"},{"annotations":[109957],"is_not":false,"rel_names":["is_a"],"summary":nu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of the hydrolysis of any glycosyl bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase 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id: PR:O42993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.17c","synonyms":[{"name":"FK506-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FKBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC24E9.17c","type":"related"},{"name":"Spom972h-fkh1","type":"exact"}],"termid":"PR:O42993"}


id: GO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle envelope that surrounds the chromosomes and the central part of the spindle apparatus during mitosis and meiosis; observed in many invertebrates. The spindle envelope consists of membrane layers, called parafusorial membranes, derived from endoplasmic reticulum membrane; in male meiosis it forms during prometaphase and persists until early in the ensuing interphase.","definition_xrefs":["GOC:sart","PMID:19417004","PMID:6428889","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle envelope","termid":"GO:0070732"}


id: PBO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOSLID antisense RNA 1","termid":"PBO:0060369"}


id: GO:0033967
data:
  {"annotated_genes":["SJAG_04527","SJAG_02553","SJAG_06613","SJAG_02350","SJAG_01369","SJAG_03234","SJAG_00943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106138,104005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[97960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[111369,109519,86611,100611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box C/D type small nucleolar RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_01369":null,"SJAG_02350":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_04527":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"box C/D snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033967","terms_by_termid":{"GO:0000494":null,"GO:0034965":null,"GO:0106410":null}}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71963,76639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: PBO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein (predicted)","termid":"PBO:0002556"}


id: GO:1990482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + inositol phosphorylceramide (IPC) = UDP + GlcA-IPC.","definition_xrefs":["GOC:tb","PMID:25122154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"sphingolipid alpha-glucuronosyltransferase activity","synonyms":[{"name":"inositol phosphorylceramide glucuronosyltransferase activity","type":"related"}],"termid":"GO:1990482"}


id: PATO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000815 absolute odor acuity value (obsolete PATO:0000815)","termid":"PATO:0000815"}


id: PBO:0031328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cisplatin","termid":"PBO:0031328"}


id: GO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to freezing (obsolete GO:0061409)","termid":"GO:0061409"}


id: PBO:0017593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74 (predicted)","termid":"PBO:0017593"}


id: PBO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 12","termid":"PBO:0075242"}


id: GO:0045114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta 2 integrins, a subfamily of integrins which contain the beta 2 subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"beta 2 integrin biosynthetic process","synonyms":[{"name":"beta 2 integrin anabolism","type":"exact"},{"name":"beta 2 integrin biosynthesis","type":"exact"},{"name":"beta 2 integrin formation","type":"exact"},{"name":"beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045114"}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29182528","PMID:29230098","PMID:29086764","PMID:29626935","PMID:29576969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: PBO:0085798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains a J-domain, which is a region with homology to the E. coli DnaJ protein","termid":"PBO:0085798"}


id: GO:0044566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a chondrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["CL:0000138","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte activation","termid":"GO:0044566"}


id: GO:0018899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dce"],"synonyms":[{"name":"1,2-dichloroethane metabolism","type":"exact"}],"termid":"GO:0018899"}


id: FYPO:0003499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of pre-replicative complex assembly is increased.","definition_xrefs":["PomBase:mah","PMID:22970243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pre-replicative complex assembly","termid":"FYPO:0000773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of pre-replicative complex assembly","synonyms":[{"name":"increased rate of MCM complex loading","type":"narrow"},{"name":"increased rate of pre-RC assembly","type":"exact"},{"name":"increased rate of pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"increased rate of pre-replicative complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0003499"}


id: GO:1903113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of copper ion transmembrane transporter activity.","definition_xrefs":["PMID:23122209","GOC:bhm","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"copper ion transmembrane transporter complex","termid":"GO:1903113"}


id: FYPO:0001571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a greater extent than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased protein-protein interaction","synonyms":[{"name":"increased protein binding","type":"exact"}],"termid":"FYPO:0001571"}


id: PBO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cell_wall-degrading_enzymes","termid":"PBO:0030614"}


id: GO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin3 (DDX20), Gemin4, and Gemin5, and can bind to snRNAs; may be an intermediate in SMN complex assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Gemin3-Gemin4-Gemin5 complex","termid":"GO:0034716"}


id: PBO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC3 divergent transcript","termid":"PBO:0045208"}


id: PBO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase (predicted)","termid":"PBO:0003203"}


id: GO:0048585
data:
  {"annotated_genes":["SJAG_03720","SJAG_00266","SJAG_00229","SJAG_00293","SJAG_00642","SJAG_03185","SJAG_00209","SJAG_05346","SJAG_02379","SJAG_02231","SJAG_02426","SJAG_00824","SJAG_03353","SJAG_02875","SJAG_01245","SJAG_03126","SJAG_00526","SJAG_02514","SJAG_04259","SJAG_03508","SJAG_00875","SJAG_03355","SJAG_04249","SJAG_00457","SJAG_01983","SJAG_00975","SJAG_02451","SJAG_04910","SJAG_00991","SJAG_03089","SJAG_04943","SJAG_03072","SJAG_03048","SJAG_02392","SJAG_01297","SJAG_04551","SJAG_01114","SJAG_02233","SJAG_03592","SJAG_01790","SJAG_01386","SJAG_04455","SJAG_01679","SJAG_00610","SJAG_02013","SJAG_00990","SJAG_01184","SJAG_00883","SJAG_00424","SJAG_07012","SJAG_01142","SJAG_02858","SJAG_03263","SJAG_02481","SJAG_02765","SJAG_04522","SJAG_03893","SJAG_04206","SJAG_05000","SJAG_03681","SJAG_02169","SJAG_00289","SJAG_04825","SJAG_03501","SJAG_00573","SJAG_02336","SJAG_00169","SJAG_03799","SJAG_03678","SJAG_02311","SJAG_03486","SJAG_02000","SJAG_01253","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107936,103116,110317,86243,111978,104165,109827,95320,99727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[112468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[87631,103875,112469,88356,96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[96770,112213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[102927,103505,114398,91523,95180,99636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[98155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[97936,98647,84940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[94602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060400"},{"annotations":[87888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903298"},{"annotations":[103018,83673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[89826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[114399,91651,87187,90693,95182,113170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[88932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[107325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[103118,106112,88447,87258,103434,89078,88529,111981,95402,97054,91315,100870,95321,86248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[107680,86762,101760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[89800,88938,114307,110635,105610,94612,106904,110035,113137,97230,105187,112320,100969,91780,95302,103031,98816,83487,109180,112214,112569,103285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"negatively_regulates","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":74,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00573":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_02875":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of response to stimulus","type":"exact"},{"name":"down-regulation of response to stimulus","type":"exact"},{"name":"downregulation of response to stimulus","type":"exact"},{"name":"inhibition of response to stimulus","type":"narrow"}],"termid":"GO:0048585","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0043409":null,"GO:0046580":null,"GO:0060400":null,"GO:0090029":null,"GO:0106057":null,"GO:0106072":null,"GO:0110034":null,"GO:0140499":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903298":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904332":null,"GO:2000639":null,"GO:2001033":null}}


id: PBO:0053008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 3","termid":"PBO:0053008"}


id: PBO:0073167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS binding protein 2 like","termid":"PBO:0073167"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.2.1.26","MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: PBO:0054807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2220","termid":"PBO:0054807"}


id: GO:0036428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide + GTP = adenosylcobinamide phosphate + GDP + H+.","definition_xrefs":["RHEA:15765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosylcobinamide kinase activity","termid":"GO:0043752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"adenosylcobinamide kinase (GTP-specific) activity","secondary_identifiers":["KEGG_REACTION:R06558","MetaCyc:RXN-14063"],"termid":"GO:0036428"}


id: GO:0008823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cu+ + NAD+ + H+ = Cu2+ + NADH.","definition_xrefs":["PMID:10510271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cupric reductase activity","secondary_identifiers":["MetaCyc:R170-RXN","EC:1.16.1.-"],"termid":"GO:0008823"}


id: PBO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin depolymerizing factor, cofilin","termid":"PBO:0002706"}


id: PBO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 2","termid":"PBO:0045678"}


id: FYPO:0004311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to CENP-A containing chromatin","synonyms":[{"name":"abnormal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"abnormal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004311"}


id: PBO:0027714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_small_cell","termid":"PBO:0027714"}


id: GO:0019075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus maturation","synonyms":[{"name":"bacteriophage maturation","type":"narrow"},{"name":"viral maturation","type":"exact"}],"termid":"GO:0019075"}


id: PBO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 17 (pseudogene)","termid":"PBO:0045606"}


id: PBO:0074039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 24","termid":"PBO:0074039"}


id: GO:1990616
data:
  {"annotated_genes":["SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110687],"is_not":false,"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ions out of mitochondrial matrix into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:25585246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial magnesium ion transmembrane transport","termid":"GO:0045016"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"magnesium ion export from mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"magnesium ion efflux from mitochondrion","type":"exact"}],"termid":"GO:1990616","terms_by_termid":{"GO:1990616":null}}


id: PBO:0039237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 2","termid":"PBO:0039237"}


id: PBO:0075572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 2B","termid":"PBO:0075572"}


id: PBO:0073029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 2","termid":"PBO:0073029"}


id: PBO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain gene cluster antisense RNA","termid":"PBO:0060283"}


id: GO:0098766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis I.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis I M phase (obsolete GO:0098766)","termid":"GO:0098766"}


id: MOD:01374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification that effectively oxygenates C5 of an L-leucine residue to form a (2S,4R)-5-oxoleucine.","definition_xrefs":["PubMed:16858410","RESID:AA0444","ChEBI:43739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-5-oxoleucine","synonyms":[{"name":"(2S,4R)-2-amino-4-methyl-5-oxopentanoic acid","type":"exact"},{"name":"(2S,4R)-5-oxoleucine","type":"exact"},{"name":"(4R)-5-oxo-L-leucine","type":"exact"}],"termid":"MOD:01374"}


id: PBO:0069607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: GO:0031281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclase activity","synonyms":[{"name":"activation of cyclase activity","type":"narrow"},{"name":"stimulation of cyclase activity","type":"narrow"},{"name":"up regulation of cyclase activity","type":"exact"},{"name":"up-regulation of cyclase activity","type":"exact"},{"name":"upregulation of cyclase activity","type":"exact"}],"termid":"GO:0031281"}


id: GO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carotene + a reduced electron acceptor + O2 = C3-hydroxylated carotene + an oxidized electron acceptor + H2O. This is a general reaction to represent the C3 hydroxylation of the beta ring of a carotene.","definition_xrefs":["MetaCyc:MONOMER-12386","PMID:16492736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carotene beta-ring hydroxylase activity","secondary_identifiers":["GO:0042411"],"synonyms":[{"name":"beta-carotene hydroxylase activity","type":"narrow"}],"termid":"GO:0010291"}


id: GO:0017076
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id: GO:0007088
data:
  {"annotated_genes":["SJAG_02451","SJAG_00666","SJAG_02058","SJAG_04884","SJAG_03126","SJAG_04968","SJAG_01330","SJAG_02498","SJAG_01297","SJAG_04259","SJAG_01805","SJAG_01837","SJAG_04573","SJAG_02380","SJAG_02336","SJAG_00883","SJAG_02169","SJAG_03681","SJAG_01679","SJAG_04999","SJAG_04126","SJAG_03048","SJAG_03353","SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106873],"is_not":false,"summary":null,"term":"GO:0007088"},{"annotations":[99727,104165,95320,107936,103116,110317,109827,111978,86243],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110557,109831,105845,112761,102189,95176,86246,97582,111616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111617,102190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[89826],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[112765],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[95878,110318,89432,107336,97898,110827,98170,93406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitosis","type":"exact"}],"termid":"GO:0007088","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: PR:O14254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NADP], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11822:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NADP], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.08","secondary_identifiers":["UniProtKB:O14254"],"synonyms":[{"name":"IDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IDP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC6G10.08","type":"related"},{"name":"Spom972h-IDH2nadp","type":"exact"},{"name":"oxalosuccinate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14254"}


id: PBO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit (predicted)","termid":"PBO:0005559"}


id: PBO:0050517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D1","termid":"PBO:0050517"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GOC:TermGenie","PMID:26503245","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA binding","termid":"GO:1905493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of G-quadruplex DNA binding","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: PBO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by mammalian rab5","termid":"PBO:0001716"}


id: PBO:0081563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 487","termid":"PBO:0081563"}


id: PBO:0036457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase Met3","termid":"PBO:0036457"}


id: PBO:0061140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 3","termid":"PBO:0061140"}


id: PBO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase (predicted)","termid":"PBO:0005205"}


id: GO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air that is part of the organism's response to external or internal stimuli resulting in flight.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"},{"relation_name":"is_a","term_name":"flight","termid":"GO:0060361"},{"relation_name":"part_of","term_name":"flight behavior","termid":"GO:0007629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight involved in flight behavior","termid":"GO:0060362"}


id: GO:0016884
data:
  {"annotated_genes":["SJAG_00412","SJAG_04634","SJAG_03355","SJAG_04549","SJAG_00964","SJAG_00392","SJAG_02832","SJAG_02721","SJAG_01577","SJAG_02618","SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106741,97955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004066"},{"annotations":[102397,89040,107032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004088"},{"annotations":[107251,114490,92352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050567"},{"annotations":[89043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003922"},{"annotations":[96973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"},{"annotations":[113386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003952"},{"annotations":[95304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004642"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of the amide nitrogen of glutamine to a substrate. Usually composed of two subunits or domains, one that first hydrolyzes glutamine, and then transfers the resulting ammonia to the second subunit (or domain), where it acts as a source of nitrogen.","definition_xrefs":["PMID:12360532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null,"SJAG_01577":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02832":null,"SJAG_03355":null,"SJAG_04549":null,"SJAG_04634":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016003","EC:6.3.5.-"],"termid":"GO:0016884","terms_by_termid":{"GO:0003921":null,"GO:0003922":null,"GO:0003952":null,"GO:0004066":null,"GO:0004088":null,"GO:0004642":null,"GO:0050567":null}}


id: GO:0098761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-7","termid":"GO:0098760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-7","synonyms":[{"name":"cellular response to IL-7","type":"exact"}],"termid":"GO:0098761"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: GO:0033823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 5-(D-galactosyloxy)-L-lysine-procollagen = UDP + 1,2-D-glucosyl-5-D-(galactosyloxy)-L-lysine-procollagen.","definition_xrefs":["EC:2.4.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"procollagen glucosyltransferase activity","secondary_identifiers":["RHEA:12576","Reactome:R-HSA-1981157","MetaCyc:PROCOLLAGEN-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-collagenglucosyltransferase activity","type":"related"},{"name":"UDP-glucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"collagen glucosyltransferase activity","type":"related"},{"name":"collagen hydroxylysyl glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine-glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-collagen glucosyltransferase activity","type":"related"}],"termid":"GO:0033823"}


id: GO:0008395
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008396"},{"annotations":[83961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008387"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a hydroxyl group on a steroid by incorporation of oxygen from O2.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steroid hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6785245","Reactome:R-HSA-9035960","Reactome:R-HSA-191999","GO:0008394","Reactome:R-HSA-193780","Reactome:R-HSA-9758674","RHEA:43836","Reactome:R-HSA-193713","Reactome:R-HSA-192123","Reactome:R-HSA-192042","Reactome:R-HSA-193393","Reactome:R-HSA-191983","Reactome:R-HSA-193460","Reactome:R-HSA-193497","Reactome:R-HSA-193965","Reactome:R-HSA-193737","Reactome:R-HSA-192054","Reactome:R-HSA-193787","Reactome:R-HSA-6785244","Reactome:R-HSA-193995","Reactome:R-HSA-193143","Reactome:R-HSA-5601849","Reactome:R-HSA-193719","Reactome:R-HSA-193060","Reactome:R-HSA-193792","Reactome:R-HSA-5602170"],"synonyms":[{"name":"cytochrome P450 CYP2G1","type":"narrow"},{"name":"olfactory-specific steroid hydroxylase activity","type":"narrow"}],"termid":"GO:0008395","terms_by_termid":{"GO:0008387":null,"GO:0008396":null}}


id: GO:0048073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eye pigmentation","termid":"GO:0048073"}


id: GO:0019315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"allose biosynthetic process","termid":"GO:0046366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-allose biosynthetic process","synonyms":[{"name":"D-allose anabolism","type":"exact"},{"name":"D-allose biosynthesis","type":"exact"},{"name":"D-allose formation","type":"exact"},{"name":"D-allose synthesis","type":"exact"}],"termid":"GO:0019315"}


id: PATO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized adaxially","termid":"PATO:0002396"}


id: PBO:0090304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Sti1","termid":"PBO:0090304"}


id: PATO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconcave","termid":"PATO:0002039"}


id: GO:0033026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell apoptotic process","synonyms":[{"name":"down regulation of mast cell apoptosis","type":"exact"},{"name":"down-regulation of mast cell apoptosis","type":"exact"},{"name":"downregulation of mast cell apoptosis","type":"exact"},{"name":"inhibition of mast cell apoptosis","type":"narrow"},{"name":"negative regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033026"}


id: GO:0004824
data:
  {"annotated_genes":["SJAG_00488","SJAG_04409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101213,111746],"is_not":false,"summary":null,"term":"GO:0004824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys).","definition_xrefs":["EC:6.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"lysine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380008","RHEA:20792","Reactome:R-HSA-380233","MetaCyc:LYSINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-lysine-transfer RNA ligase activity","type":"related"},{"name":"L-lysine:tRNALys ligase (AMP-forming)","type":"related"},{"name":"lysine translase activity","type":"related"},{"name":"lysine-tRNA synthetase activity","type":"related"},{"name":"lysyl-tRNA synthetase activity","type":"exact"},{"name":"lysyl-transfer RNA synthetase activity","type":"related"},{"name":"lysyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004824","terms_by_termid":{"GO:0004824":null}}


id: PBO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 1","termid":"PBO:0060850"}


id: GO:2000952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of xyloglucan metabolic process","termid":"GO:2000949"},{"relation_name":"is_a","term_name":"regulation of xyloglucan catabolic process","termid":"GO:2000951"},{"relation_name":"is_a","term_name":"negative regulation of hemicellulose catabolic process","termid":"GO:2000989"},{"relation_name":"negatively_regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of xyloglucan catabolic process","synonyms":[{"name":"negative regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000952"}


id: PBO:0111462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex catalytic subunit Trm61","termid":"PBO:0111462"}


id: PR:O42943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C16H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.08c","secondary_identifiers":["UniProtKB:O42943"],"synonyms":[{"name":"Spom972h-ABCF2","type":"exact"}],"termid":"PR:O42943"}


id: GO:0008611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["ISBN:0198547684","PMID:15337120","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"glycerol ether biosynthetic process","termid":"GO:0046504"},{"relation_name":"is_a","term_name":"cellular lipid biosynthetic process","termid":"GO:0097384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ether lipid biosynthetic process","synonyms":[{"name":"ether lipid anabolism","type":"exact"},{"name":"ether lipid biosynthesis","type":"exact"},{"name":"ether lipid formation","type":"exact"},{"name":"ether lipid synthesis","type":"exact"},{"name":"plasmalogen biosynthetic process","type":"narrow"}],"termid":"GO:0008611"}


id: GO:0060474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the controlled movement of a flagellated sperm cell is initiated as part of the process required for flagellated sperm to reach fertilization competence.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"positive regulation of flagellated sperm motility","termid":"GO:1902093"},{"relation_name":"part_of","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flagellated sperm motility involved in capacitation","synonyms":[{"name":"positive regulation of sperm motility involved in capacitation","type":"related"}],"termid":"GO:0060474"}


id: GO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of more than 1000 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"long tract gene conversion","termid":"GO:0035824"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: GO:1901366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of funalenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"funalenone metabolic process","termid":"GO:1901364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"funalenone biosynthetic process","synonyms":[{"name":"funalenone anabolism","type":"exact"},{"name":"funalenone biosynthesis","type":"exact"},{"name":"funalenone formation","type":"exact"},{"name":"funalenone synthesis","type":"exact"}],"termid":"GO:1901366"}


id: PBO:0026936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromosome","termid":"PBO:0026936"}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: PBO:0083371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF YCL005W-A; mutations in YCL007C were thought to confer sensitivity to calcofluor white, but this phenotype was later shown to be due to the defect in YCL005W-A","termid":"PBO:0083371"}


id: PBO:0059438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A7","termid":"PBO:0059438"}


id: PBO:0087215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase; catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; SAM1 has a paralog, SAM2, that arose from the whole genome duplication","termid":"PBO:0087215"}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: PBO:0078821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-4","termid":"PBO:0078821"}


id: GO:0099585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into presynaptic cytosol","termid":"GO:0099585"}


id: GO:0019309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mannose catabolic process","secondary_identifiers":["MetaCyc:MANNCAT-PWY","MetaCyc:PWY3O-1743"],"synonyms":[{"name":"mannose breakdown","type":"exact"},{"name":"mannose catabolism","type":"exact"},{"name":"mannose degradation","type":"exact"}],"termid":"GO:0019309"}


id: PBO:0077146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase","termid":"PBO:0077146"}


id: PR:P39825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A profilin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01076","PRO:DNx","PANTHER:PTHR11604:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.15c","secondary_identifiers":["UniProtKB:P39825"],"synonyms":[{"name":"Spom972h-PFN4","type":"exact"}],"termid":"PR:P39825"}


id: PATO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000190 gait (obsolete PATO:0000190)","termid":"PATO:0000190"}


id: GO:1900490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:1900490)","synonyms":[{"name":"activation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"activation of HMG-CoA reductase activity","type":"broad"},{"name":"activation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"narrow"},{"name":"positive regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"positive regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up-regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up-regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"upregulation of HMG-CoA reductase activity","type":"broad"},{"name":"upregulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"}],"termid":"GO:1900490"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: PR:Q9US30
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm19 gene.","definition_xrefs":["UniProtKB:Q9US30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.02c","synonyms":[{"name":"Spom972h-rsm19","type":"exact"}],"termid":"PR:Q9US30"}


id: PBO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member E","termid":"PBO:0060872"}


id: PBO:0070770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12","termid":"PBO:0070770"}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: PBO:0038848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS16 divergent transcript","termid":"PBO:0038848"}


id: FYPO:0004401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5926.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on KT5926","synonyms":[{"name":"normal cell population growth in presence of KT5926","type":"exact"},{"name":"normal cell population growth on KT5926","type":"exact"},{"name":"normal cellular response to KT5926","type":"related"},{"name":"normal vegetative cell population growth on KT5926","type":"exact"}],"termid":"FYPO:0004401"}


id: GO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-alanine, the D-enantiomer of the amino acid alanine.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-alanine metabolic process","termid":"GO:0046436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"D-alanine catabolic process","synonyms":[{"name":"(2R)-2-aminopropanoic acid catabolic process","type":"exact"}],"termid":"GO:0055130"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: PBO:0071404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 10","termid":"PBO:0071404"}


id: MOD:02035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(6) HexNAc(3)","definition_xrefs":["Unimod:1509","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex1Hex6HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(6) HexNAc(3)","type":"related"}],"termid":"MOD:02035"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: PBO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate N-acetyltransferase (predicted)","termid":"PBO:0003141"}


id: FYPO:0006810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur less frequently than in wild type cells. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased gross chromosomal rearrangement","synonyms":[{"name":"decreased occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006810"}


id: GO:0009895
data:
  {"annotated_genes":["SJAG_00475","SJAG_04825","SJAG_03448","SJAG_00685","SJAG_00052","SJAG_01331","SJAG_03696","SJAG_04586","SJAG_02573","SJAG_03371","SJAG_03067","SJAG_02723","SJAG_03283","SJAG_00797","SJAG_04946","SJAG_05314","SJAG_03883","SJAG_00457","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77084,85708,114396,95832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[84985,91929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[98151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[105185,114451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[111062,85191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[102527,104485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[84986,84577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[102829,85919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[102176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[86156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"negatively_regulates","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00457":null,"SJAG_00475":null,"SJAG_00685":null,"SJAG_00797":null,"SJAG_01331":null,"SJAG_02573":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03283":null,"SJAG_03371":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of catabolic process","type":"exact"},{"name":"down-regulation of catabolic process","type":"exact"},{"name":"downregulation of catabolic process","type":"exact"},{"name":"inhibition of catabolic process","type":"narrow"},{"name":"negative regulation of breakdown","type":"exact"},{"name":"negative regulation of catabolism","type":"exact"},{"name":"negative regulation of degradation","type":"exact"}],"termid":"GO:0009895","terms_by_termid":{"GO:0010507":null,"GO:0016242":null,"GO:0032435":null,"GO:0045820":null,"GO:0048255":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null,"GO:1905785":null}}


id: GO:0010698
data:
  {"annotated_genes":["SJAG_02920"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112889],"is_not":false,"summary":null,"term":"GO:0010698"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an acetyltransferase, an enzyme which catalyzes the transfer of an acetyl group to an acceptor molecule.","definition_xrefs":["GOC:tb","PMID:23912279","GOC:dph","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"acetyltransferase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetyltransferase stimulator activity","type":"exact"}],"termid":"GO:0010698","terms_by_termid":{"GO:0010698":null}}


id: PBO:0052595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 3","termid":"PBO:0052595"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: GO:1905758
data:
  {"annotated_genes":["SJAG_04776","SJAG_04666","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82989,87976,90045],"is_not":false,"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","PMID:27898700","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"positively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905758","terms_by_termid":{"GO:1905758":null}}


id: PBO:0072446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 10","termid":"PBO:0072446"}


id: PR:O74755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pst3 gene.","definition_xrefs":["UniProtKB:O74755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.16c","synonyms":[{"name":"SIN3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pst3","type":"exact"}],"termid":"PR:O74755"}


id: PBO:0069398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 658, pseudogene","termid":"PBO:0069398"}


id: PBO:0075883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 1","termid":"PBO:0075883"}


id: PBO:0052296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH RNA binding domain containing, signal transduction associated 1","termid":"PBO:0052296"}


id: GO:0016519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gastric inhibitory peptide (GIP) and transmitting the signal across the membrane to activate an associated G-protein.","definition_xrefs":["GOC:mah","PMID:8243312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gastric inhibitory peptide receptor activity","synonyms":[{"name":"GIP receptor activity","type":"exact"},{"name":"glucose-dependent insulinotropic polypeptide receptor activity","type":"exact"}],"termid":"GO:0016519"}


id: GO:0071472
data:
  {"annotated_genes":["SJAG_00661","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95916],"is_not":false,"summary":null,"term":"GO:0071472"},{"annotations":[85006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salt stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular salinity response","type":"exact"},{"name":"cellular response to ionic osmotic stress","type":"exact"}],"termid":"GO:0071472","terms_by_termid":{"GO:0071472":null,"GO:0071473":null}}


id: GO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping activity (obsolete GO:0003783)","synonyms":[{"name":"barbed-end actin capping activity","type":"exact"}],"termid":"GO:0003783"}


