# terms

id: FYPO:0000071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aureobasidin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to aureobasidin A","synonyms":[{"name":"resistance to AbA","type":"exact"},{"name":"resistance to aureobasidin A during mitotic cell cycle","type":"related"},{"name":"resistance to aureobasidin A during vegetative growth","type":"exact"},{"name":"resistant to aureobasidin A","type":"exact"}],"termid":"FYPO:0000071"}


id: GO:0140793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX tyrosine phosphate (position 142) + H2O = histone H2AX tyrosine (position 142) + phosphate.","definition_xrefs":["PMID:19234442","PMID:19351884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone phosphatase activity","termid":"GO:0140789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0016787","GO:0140096","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"histone H2AXY142 phosphatase activity","synonyms":[{"name":"histone H2-Y142 phosphatase activity","type":"exact"},{"name":"histone H2Y142 phosphatase activity","type":"related"},{"name":"histone tyrosine phosphatase activity (H2-Y142 specific)","type":"exact"}],"termid":"GO:0140793"}


id: GO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate = cis -4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r0502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-2H-benzo[h]chromene-2-carboxylate isomerase activity","termid":"GO:0018837"}


id: GO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nonaheme cytochrome c (obsolete GO:0009474)","synonyms":[{"name":"nonaheme cytochrome c","type":"exact"}],"termid":"GO:0009474"}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: GO:2000194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female gonad development","synonyms":[{"name":"regulation of ovarian development","type":"exact"},{"name":"regulation of ovary development","type":"exact"}],"termid":"GO:2000194"}


id: PBO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2482","termid":"PBO:0055066"}


id: GO:0004019
data:
  {"annotated_genes":["SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84369],"is_not":false,"summary":null,"term":"GO:0004019"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H+ + phosphate.","definition_xrefs":["EC:6.3.4.4","RHEA:15753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"adenylosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENYLOSUCCINATE-SYNTHASE-RXN","Reactome:R-HSA-111524","KEGG_REACTION:R01135"],"synonyms":[{"name":"IMP--aspartate ligase activity","type":"related"},{"name":"IMP:L-aspartate ligase (GDP-forming)","type":"related"},{"name":"adenylosuccinate synthetase activity","type":"related"},{"name":"succino-AMP synthetase activity","type":"related"},{"name":"succinoadenylic kinosynthetase activity","type":"related"}],"termid":"GO:0004019","terms_by_termid":{"GO:0004019":null}}


id: PBO:0059258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L23","termid":"PBO:0059258"}


id: GO:0106008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutaramate + H2O = 2-oxoglutarate + NH3.","definition_xrefs":["EC:3.5.1.111","PMID:21288482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"2-oxoglutaramate amidase activity","secondary_identifiers":["RHEA:32963"],"termid":"GO:0106008"}


id: PR:O94451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pli1 gene.","definition_xrefs":["UniProtKB:O94451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 SUMO-protein ligase pli1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.05","synonyms":[{"name":"Spom972h-pli1","type":"exact"}],"termid":"PR:O94451"}


id: RO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","termid":"RO:0002348"}


id: PBO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMNL1 divergent transcript","termid":"PBO:0047707"}


id: PBO:0059746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 20","termid":"PBO:0059746"}


id: GO:1901934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"bicyclogermacrene biosynthetic process","synonyms":[{"name":"bicyclogermacrene anabolism","type":"exact"},{"name":"bicyclogermacrene biosynthesis","type":"exact"},{"name":"bicyclogermacrene formation","type":"exact"},{"name":"bicyclogermacrene synthesis","type":"exact"}],"termid":"GO:1901934"}


id: PBO:0075065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-28","termid":"PBO:0075065"}


id: GO:0034499
data:
  {"annotated_genes":["SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108449],"is_not":false,"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PVE to Golgi transport","type":"exact"},{"name":"prevacuolar endosome to Golgi transport","type":"exact"}],"termid":"GO:0034499","terms_by_termid":{"GO:0034499":null}}


id: GO:0009665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of plastids between daughter cells at cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid inheritance","termid":"GO:0009665"}


id: PBO:0083020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome I but later withdrawn","termid":"PBO:0083020"}


id: PATO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionality","termid":"PATO:0001509"}


id: PBO:0079480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin beta","termid":"PBO:0079480"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: GO:0014864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muscle activity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle activity","termid":"GO:0014850"},{"relation_name":"is_a","term_name":"detection of activity","termid":"GO:0014865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle activity","termid":"GO:0014864"}


id: PBO:0085116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase); FK506 binding protein; affects expression of multiple genes via its role in nucleosome assembly; phosphorylated by casein kinase II (Cka1p-Cka2p-Ckb1p-Ckb2p) and dephosphorylated by Ptp1p; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; FPR3 has a paralog, FPR4, that arose from the whole genome duplication","termid":"PBO:0085116"}


id: GO:0060589
data:
  {"annotated_genes":["SJAG_04074","SJAG_02379","SJAG_03754","SJAG_02539","SJAG_03246","SJAG_02248","SJAG_03002","SJAG_00514","SJAG_04464","SJAG_01415","SJAG_00028","SJAG_01576","SJAG_04653","SJAG_04391","SJAG_00064","SJAG_00289","SJAG_01309","SJAG_03678","SJAG_01025","SJAG_04010","SJAG_00991","SJAG_04548","SJAG_02012","SJAG_03705","SJAG_04283","SJAG_01030","SJAG_00143","SJAG_02160","SJAG_02368","SJAG_05210","SJAG_04982","SJAG_00092","SJAG_00338","SJAG_02645","SJAG_02027","SJAG_03021","SJAG_04910","SJAG_01386","SJAG_02231","SJAG_02486","SJAG_02831","SJAG_03655","SJAG_04013","SJAG_04400","SJAG_01526","SJAG_02278","SJAG_04203","SJAG_00864","SJAG_01319","SJAG_00858","SJAG_06588","SJAG_04615","SJAG_03488","SJAG_04776","SJAG_00990","SJAG_04491","SJAG_00801","SJAG_03704","SJAG_02390","SJAG_03142","SJAG_01600","SJAG_04771","SJAG_02307","SJAG_00216","SJAG_05346","SJAG_03085","SJAG_04462","SJAG_04733","SJAG_02471","SJAG_02529","SJAG_02520","SJAG_04938","SJAG_03600","SJAG_00467","SJAG_00807","SJAG_02422","SJAG_03361","SJAG_02819","SJAG_04765","SJAG_01048","SJAG_01184","SJAG_01659","SJAG_04498","SJAG_04522","SJAG_04943","SJAG_03581","SJAG_03153","SJAG_05184","SJAG_02833","SJAG_01011","SJAG_02493","SJAG_00551","SJAG_01699","SJAG_02277","SJAG_02004","SJAG_03089","SJAG_03338","SJAG_04724","SJAG_04080","SJAG_03748","SJAG_02765","SJAG_04284","SJAG_01695","SJAG_03268","SJAG_02063","SJAG_03836","SJAG_01114","SJAG_00824","SJAG_04837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91543,99349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005092"},{"annotations":[106906,107956,110297,103033,103510,105350,65335,106798,96092,107328,103287,112686,113224,94616,106048,111059,92243,112121,83952,102347,91085,100896,113831,84730,90590,88934,105525,101253,107419,88775,90600,88942,86786,94574,82993,98241,89803,101009,91544,101188,88836,87821,89802,89602,88774,91782,95403,88449,93749,93773,90688,102734,102929,106058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[112392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[101130,102556,86618,91955,112113,113580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030695"},{"annotations":[82971,102287,104224,89680,110036,113996,86718,92356,90226,91735,102878,106964,88382,95579,92000,83525,93475,93526,89492,87661,93683,93435,106059,89951,110037,93017,96260,111593,112588,87004,90650,95578,110777,94853,85377,111879,105021,109991,110680,110861,105953,103864,96259,106624,100972,94179,106737,73800,113982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005085"},{"annotations":[89123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005093"},{"annotations":[95268,106751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of an NTPase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":109,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00064":null,"SJAG_00092":null,"SJAG_00143":null,"SJAG_00216":null,"SJAG_00289":null,"SJAG_00338":null,"SJAG_00467":null,"SJAG_00514":null,"SJAG_00551":null,"SJAG_00801":null,"SJAG_00807":null,"SJAG_00824":null,"SJAG_00858":null,"SJAG_00864":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01011":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01048":null,"SJAG_01114":null,"SJAG_01184":null,"SJAG_01309":null,"SJAG_01319":null,"SJAG_01386":null,"SJAG_01415":null,"SJAG_01526":null,"SJAG_01576":null,"SJAG_01600":null,"SJAG_01659":null,"SJAG_01695":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02027":null,"SJAG_02063":null,"SJAG_02160":null,"SJAG_02231":null,"SJAG_02248":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02422":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02520":null,"SJAG_02529":null,"SJAG_02539":null,"SJAG_02645":null,"SJAG_02765":null,"SJAG_02819":null,"SJAG_02831":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03246":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03361":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03655":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03754":null,"SJAG_03836":null,"SJAG_04010":null,"SJAG_04013":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04203":null,"SJAG_04283":null,"SJAG_04284":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04462":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04837":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_04982":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"nucleoside-triphosphatase regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NTPase regulator activity","type":"exact"}],"termid":"GO:0060589","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: GO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invasive growth as a result of deprivation of glucose, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:14668363","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036095)","synonyms":[{"name":"transcriptional activation of genes involved in invasive growth","type":"related"}],"termid":"GO:0036095"}


id: GO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads along the target mRNA in a 5' or 3' direction, outside of the initial target sequence.","definition_xrefs":["PMID:12554873","PMID:24369430","PMID:11719187","PMID:23724097","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transitive RNA interference","synonyms":[{"name":"transitive RNAi","type":"exact"}],"termid":"GO:0036453"}


id: PBO:0034508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_segregation","termid":"PBO:0034508"}


id: PBO:0047025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A28, pseudogene","termid":"PBO:0047025"}


id: PBO:0040366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 3","termid":"PBO:0040366"}


id: PBO:0056499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 3","termid":"PBO:0056499"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["MetaCyc:RXN-11629","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"geranylgeraniol kinase activity","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: PBO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 1","termid":"PBO:0048294"}


id: PBO:0074248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC66A2 pseudogene 2","termid":"PBO:0074248"}


id: GO:0140658
data:
  {"annotated_genes":["SJAG_02575","SJAG_00500","SJAG_00111","SJAG_04355","SJAG_04038","SJAG_00650","SJAG_01653","SJAG_02521","SJAG_00475","SJAG_02798","SJAG_01938","SJAG_03613","SJAG_00925","SJAG_02872","SJAG_02698","SJAG_02906","SJAG_04692","SJAG_05313","SJAG_04755","SJAG_03982","SJAG_04147","SJAG_00980","SJAG_04114","SJAG_03036","SJAG_02571","SJAG_01878","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84125,84385,84795,85585,85723,88162,88858,91149,92786,97479,101312,102832,107201,108225,110173,112789,112790,115006],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[93959,83450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[90256,99392,92134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[111074,83634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140751"},{"annotations":[109324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.","definition_xrefs":["PMID:14729263","PMID:34313222","PMID:30867599","PMID:19165147","PMID:21862382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00650":null,"SJAG_00925":null,"SJAG_00980":null,"SJAG_01653":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02571":null,"SJAG_02575":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_03036":null,"SJAG_03613":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04114":null,"SJAG_04147":null,"SJAG_04355":null,"SJAG_04692":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"ATP-dependent chromatin remodeler activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070615"],"synonyms":[{"name":"ATP hydrolysis-dependent chromatin remodeler activity","type":"exact"},{"name":"ATP-dependent chromatin remodeller activity","type":"exact"},{"name":"ATP-dependent chromatin remodelling","type":"related"},{"name":"ATPase-dependent chromatin remodeler activity","type":"exact"},{"name":"nucleosome-activated ATPase activity","type":"related"},{"name":"nucleosome-dependent ATPase activity","type":"related"}],"termid":"GO:0140658","terms_by_termid":{"GO:0140658":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140751":null,"GO:0140849":null}}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: PR:Q9HFE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit mu-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.07","synonyms":[{"name":"Spom972h-apm1","type":"exact"},{"name":"clathrin assembly protein complex 1 mu-1 medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mu-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE5"}


id: GO:0106360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-methylhexadecanoyl-CoA = 2-methylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25379"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methylhexadecanoyl-CoA lyase activity (obsolete GO:0106360)","termid":"GO:0106360"}


id: GO:0072579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which glycine receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:pr","PMID:20843816","GOC:mah","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"glycine receptor clustering","termid":"GO:0072579"}


id: GO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host excretion (obsolete GO:0044061)","synonyms":[{"name":"regulation by symbiont of host excretion","type":"exact"}],"termid":"GO:0044061"}


id: PBO:0063183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX3 divergent transcript","termid":"PBO:0063183"}


id: PBO:0042562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 4","termid":"PBO:0042562"}


id: PBO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein (predicted)","termid":"PBO:0036254"}


id: MOD:01986
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-serine.","definition_xrefs":["RESID:AA0623","PubMed:21526839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-L-serine","synonyms":[{"name":"(2R)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"}],"termid":"MOD:01986"}


id: PBO:0029946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029946"}


id: GO:0043792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4,5,6-tetrahydro-6-oxonicotinate + 2 H2O = 2-formylglutarate + NH4.","definition_xrefs":["EC:3.5.2.18","RHEA:17209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"enamidase activity","secondary_identifiers":["KEGG_REACTION:R07984","MetaCyc:3.5.2.18-RXN"],"synonyms":[{"name":"6-oxo-1,4,5,6-tetrahydronicotinate amidohydrolase activity","type":"exact"}],"termid":"GO:0043792"}


id: GO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + sinapoyl-CoA = 2-O-sinapoyl-D-glucarate + CoA.","definition_xrefs":["RHEA:23308","EC:2.3.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02899","MetaCyc:2.3.1.131-RXN"],"synonyms":[{"name":"sinapoyl-CoA:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047170"}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: PBO:0076642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta regulator 1","termid":"PBO:0076642"}


id: GO:1902877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mr","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"positively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic pattern specification","synonyms":[{"name":"activation of embryonic pattern specification","type":"narrow"},{"name":"activation of ventral/lateral system","type":"related"},{"name":"positive regulation of ventral/lateral system","type":"related"},{"name":"up regulation of embryonic pattern specification","type":"exact"},{"name":"up regulation of ventral/lateral system","type":"related"},{"name":"up-regulation of embryonic pattern specification","type":"exact"},{"name":"up-regulation of ventral/lateral system","type":"related"},{"name":"upregulation of embryonic pattern specification","type":"exact"},{"name":"upregulation of ventral/lateral system","type":"related"}],"termid":"GO:1902877"}


id: GO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoate + NAD+ = H+ + NADH + succinate semialdehyde.","definition_xrefs":["RHEA:23948","EC:1.1.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01644","MetaCyc:4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"4-hydroxybutanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"gamma-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0047577"}


id: GO:1900081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of arginine metabolic process","termid":"GO:0000821"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"regulates","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"regulation of arginine catabolic process","synonyms":[{"name":"regulation of arginine breakdown","type":"exact"},{"name":"regulation of arginine catabolism","type":"exact"},{"name":"regulation of arginine degradation","type":"exact"}],"termid":"GO:1900081"}


id: PBO:0004546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc15","termid":"PBO:0004546"}


id: PBO:0052300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketohexokinase","termid":"PBO:0052300"}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: PBO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase Cit1","termid":"PBO:0001493"}


id: PBO:0038366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component_process","termid":"PBO:0038366"}


id: PBO:0085038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of the HAT-B histone acetyltransferase complex; localized to the nucleus; has a role in telomeric silencing; other members are Hat1p and Hat2p","termid":"PBO:0085038"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: GO:1904785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GO_REF:0000058","PMID:17476329","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"regulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904785"}


id: GO:0045981
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of nucleotide metabolism","type":"exact"},{"name":"stimulation of nucleotide metabolic process","type":"narrow"},{"name":"up regulation of nucleotide metabolic process","type":"exact"},{"name":"up-regulation of nucleotide metabolic process","type":"exact"},{"name":"upregulation of nucleotide metabolic process","type":"exact"}],"termid":"GO:0045981","terms_by_termid":{"GO:1905857":null}}


id: PBO:0111876
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0111876"}


id: PBO:0068421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding region (RNP1, RRM) containing 3 pseudogene 1","termid":"PBO:0068421"}


id: GO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine = acetaldehyde + NH3.","definition_xrefs":["EC:4.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase activity","secondary_identifiers":["RHEA:15313","MetaCyc:ETHAMLY-RXN"],"synonyms":[{"name":"ethanolamine ammonia-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"ethanolamine deaminase activity","type":"related"}],"termid":"GO:0008851"}


id: PBO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 pseudogene 1","termid":"PBO:0045179"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0031445
data:
  {"annotated_genes":["SJAG_02592","SJAG_02990","SJAG_03664","SJAG_04576","SJAG_03624","SJAG_02381","SJAG_01511","SJAG_04186","SJAG_02342","SJAG_02622","SJAG_03255","SJAG_02723","SJAG_04369","SJAG_01867","SJAG_01599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86340,94300],"is_not":false,"summary":null,"term":"GO:0031445"},{"annotations":[102528,99683,106416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[104403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[99684,106417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061186"},{"annotations":[94704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[90002,106282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[96054,92886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[113841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[114195,92887,100027,113842,87394,96055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin formation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of heterochromatin organization","termid":"GO:0120261"},{"relation_name":"regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04186":null,"SJAG_04369":null,"SJAG_04576":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031445","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:0090052":null,"GO:0090055":null,"GO:1902801":null}}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: GO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P700 chlorophylls on photosystem I donate an electron to a loosely bound Quinone acceptor molecule X, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["ISBN:0716731363","GOC:jid","ISBN:0816017360"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem I (obsolete GO:0009770)","termid":"GO:0009770"}


id: MOD:01112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinoyl lysine","synonyms":[{"name":"nicotinyl lysyl","type":"exact"}],"termid":"MOD:01112"}


id: FYPO:0001608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glutamate level","termid":"FYPO:0001563"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar glutamate level","synonyms":[{"name":"decreased level of glutamate in vacuole","type":"exact"},{"name":"decreased vacuolar L-glutamate level","type":"exact"},{"name":"decreased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"decreased vacuolar glutamic acid level","type":"related"},{"name":"reduced level of glutamate in vacuole","type":"exact"},{"name":"reduced vacuolar glutamate level","type":"exact"}],"termid":"FYPO:0001608"}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: GO:0031380
data:
  {"annotated_genes":["SJAG_03193","SJAG_03356","SJAG_02725"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95288,111478,114060],"is_not":false,"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A complex required for RNAi mediated heterochromatin assembly. In S. pombe this contains RNA-directed RNA polymerase, a putative helicase and a protein containing a pap25 associated domain.","definition_xrefs":["PMID:15607976","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RDRC","type":"exact"},{"name":"Rdr1 complex","type":"narrow"}],"termid":"GO:0031380","terms_by_termid":{"GO:0031380":null}}


id: GO:0023058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adaptation of signaling pathway","synonyms":[{"name":"adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023058"}


id: PBO:0041702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 1","termid":"PBO:0041702"}


id: PBO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18 (predicted)","termid":"PBO:0000889"}


id: GO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds within a sterol regulatory element binding protein (SREBP). SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["GOC:bf","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein protease activity (obsolete GO:0017093)","synonyms":[{"name":"SREBP protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein protease activity","type":"exact"}],"termid":"GO:0017093"}


id: GO:0070633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a substance from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transepithelial transport","termid":"GO:0070633"}


id: PBO:0030342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_assembly","termid":"PBO:0030342"}


id: PBO:0078911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 2-1","termid":"PBO:0078911"}


id: PBO:0040581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid-CoA:amino acid N-acyltransferase","termid":"PBO:0040581"}


id: PATO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000356 concentration value (obsolete PATO:0000356)","termid":"PATO:0000356"}


id: PBO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 11","termid":"PBO:0052092"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: PBO:0087672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Isw1b complex; exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing; contains a PHD finger motif; other complex members are Isw1p and Ioc4p","termid":"PBO:0087672"}


id: GO:1905258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.","definition_xrefs":["GO_REF:0000058","PMID:14752510","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","termid":"GO:1990442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"regulation of nitrosative stress-induced apoptosis","type":"related"}],"termid":"GO:1905258"}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: PR:Q10191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein LTV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01197","PANTHER:PTHR21531:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein LTV1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.17","secondary_identifiers":["UniProtKB:Q10191"],"synonyms":[{"name":"Spom972h-LTV1","type":"exact"}],"termid":"PR:Q10191"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99460],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["PMID:4276459","GOC:dph","RHEA:42704","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: PBO:0082702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation","termid":"PBO:0082702"}


id: PBO:0016120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pi","termid":"PBO:0016120"}


id: PBO:0080656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 pseudogene 1","termid":"PBO:0080656"}


id: PBO:0053284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain and actin binding 1","termid":"PBO:0053284"}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: GO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The heat generation process that results in a rise in body temperature above the normal, often as a response to infection.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute-phase response","termid":"GO:0006953"},{"relation_name":"is_a","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fever generation","secondary_identifiers":["Wikipedia:Fever"],"synonyms":[{"name":"pyrexia","type":"broad"}],"termid":"GO:0001660"}


id: FYPO:0003245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the daughter nuclei formed by mitosis cluster in the middle of the cell during telophase. Normally, daughter nuclei move away from the cell division site during mitotic telophase.","definition_xrefs":["PMID:23087209","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000138","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"telophase nuclear clustering","synonyms":[{"name":"daughter nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"kissing nuclei","type":"exact"},{"name":"nuclear clustering during mitotic telophase","type":"exact"},{"name":"nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"telophase nuclear clustering during vegetative growth","type":"related"}],"termid":"FYPO:0003245"}


id: PBO:0070021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1318, pseudogene","termid":"PBO:0070021"}


id: GO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix structural constituent","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"extracellular matrix glycoprotein","type":"narrow"}],"termid":"GO:0005201"}


id: GO:1902640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propan-2-ol.","definition_xrefs":["PMID:16346237","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propan-2-ol metabolic process","termid":"GO:1902639"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propan-2-ol biosynthetic process","synonyms":[{"name":"Isopropanol biosynthetic process","type":"exact"},{"name":"Isopropyl alcohol biosynthetic process","type":"exact"},{"name":"propan-2-ol anabolism","type":"exact"},{"name":"propan-2-ol biosynthesis","type":"exact"},{"name":"propan-2-ol formation","type":"exact"},{"name":"propan-2-ol synthesis","type":"exact"}],"termid":"GO:1902640"}


id: PBO:0068183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 490","termid":"PBO:0068183"}


id: FYPO:0004510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle assembly","termid":"FYPO:0000737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle assembly during meiosis II","synonyms":[{"name":"abnormal meiosis II spindle assembly","type":"exact"},{"name":"abnormal meiosis II spindle formation","type":"exact"},{"name":"abnormal meiotic spindle assembly during meiosis II","type":"exact"},{"name":"abnormal spindle assembly at meiosis II","type":"exact"},{"name":"abnormal spindle assembly during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle assembly involved in meiosis II","type":"exact"}],"termid":"FYPO:0004510"}


id: PBO:0073961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 10","termid":"PBO:0073961"}


id: PR:O42956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- art1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.08c","synonyms":[{"name":"Spom972h-art1","type":"exact"}],"termid":"PR:O42956"}


id: PBO:0039254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member B2","termid":"PBO:0039254"}


id: PBO:0056243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog B, exon junction complex subunit","termid":"PBO:0056243"}


id: FYPO:0003037
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fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003037","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004205":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006945":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO:0007824":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: PBO:0076328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 1 pseudogene 2","termid":"PBO:0076328"}


id: PBO:0056737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 1","termid":"PBO:0056737"}


id: SO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC","synonyms":[{"name":"bacterial artificial chromosome","type":"exact"}],"termid":"SO:0000153"}


id: FYPO:0000850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to stress during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"resistance to stress during mitotic cell cycle","type":"related"},{"name":"resistant to stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000850"}


id: PBO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal mitochondrial protein","termid":"PBO:0003948"}


id: PBO:0085955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant lacks mitochondrial DNA and cannot grow on glycerol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085955"}


id: PBO:0039743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L5","termid":"PBO:0039743"}


id: FYPO:0000673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal septum assembly","synonyms":[{"name":"normal division septum assembly","type":"exact"},{"name":"normal septation","type":"broad"},{"name":"normal septum assembly during mitotic cell cycle","type":"related"},{"name":"normal septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000673"}


id: GO:0035377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transepithelial water transport","termid":"GO:0035377"}


id: PBO:0087734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal recognition particle (SRP); SRP functions in protein targeting to the endoplasmic reticulum membrane; not found in mammalian SRP; forms a pre-SRP structure in the nucleolus that is translocated to the cytoplasm","termid":"PBO:0087734"}


id: PBO:0081711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 630","termid":"PBO:0081711"}


id: MOD:00078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega)-methyl-L-arginine.","definition_xrefs":["RESID:AA0069","PubMed:15835918","PubMed:2426402","PubMed:5128665","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"omega-N-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[(imino(methylamino)methyl)amino]pentanoic acid","type":"exact"},{"name":"MOD_RES Omega-N-methylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"NG-methylarginine","type":"exact"},{"name":"NoMeArg","type":"exact"},{"name":"omega-N-methyl-L-arginine","type":"exact"},{"name":"omega-N-methylated L-arginine","type":"exact"}],"termid":"MOD:00078"}


id: PBO:0067106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 148, pseudogene","termid":"PBO:0067106"}


id: GO:0090398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.","definition_xrefs":["GOC:BHF","PMID:28682291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular senescence","termid":"GO:0090398"}


id: GO:0031120
data:
  {"annotated_genes":["SJAG_03572","SJAG_00088","SJAG_01234","SJAG_00566","SJAG_04754","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85525,91021,96943,102097,102158,110344],"is_not":false,"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031120","terms_by_termid":{"GO:0031120":null}}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: GO:0004096
data:
  {"annotated_genes":["SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114373],"is_not":false,"summary":null,"term":"GO:0004096"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O.","definition_xrefs":["EC:1.11.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"catalase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016953","RHEA:20309","Reactome:R-HSA-1222704","Reactome:R-HSA-76031","MetaCyc:CATAL-RXN","UM-BBD_enzymeID:e0834","GO:0016952"],"synonyms":[{"name":"CAT","type":"related"},{"name":"bacterial catalase-peroxidase activity","type":"narrow"},{"name":"caperase activity","type":"related"},{"name":"catalase reaction","type":"exact"},{"name":"catalase-peroxidase activity","type":"related"},{"name":"equilase activity","type":"related"},{"name":"haem catalase activity","type":"narrow"},{"name":"heme catalase activity","type":"narrow"},{"name":"hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"manganese catalase activity","type":"narrow"},{"name":"optidase activity","type":"related"}],"termid":"GO:0004096","terms_by_termid":{"GO:0004096":null}}


id: GO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of bacterial clusters to the surface of the host in a type IV pili dependent manner. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion to host cell via type IV pili","synonyms":[{"name":"type IV pili-dependent localized adherence to host","type":"exact"}],"termid":"GO:0052001"}


id: PBO:0071094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 96","termid":"PBO:0071094"}


id: GO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a mechanical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. A magnetic field exerts a torque on a ferromagnetic material (e.g. magnetite) or on a material with diamagnetic anisotropy; organisms that can detect this torque can use it to determine the orientation of the magnetic field.","definition_xrefs":["Wikipedia:Magnetoception","PMID:15886990","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of mechanical stimulus","synonyms":[{"name":"magnetoreception through mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of mechanical stimulus","type":"exact"},{"name":"magnetoreception, using mechanical stimulus","type":"exact"}],"termid":"GO:0050979"}


id: GO:0023070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the air.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via air (obsolete GO:0023070)","synonyms":[{"name":"signal transmission via air","type":"exact"}],"termid":"GO:0023070"}


id: PBO:0078714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 2-2","termid":"PBO:0078714"}


id: PBO:0087208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; required for wybutosine formation in phenylalanine-accepting tRNA; member of the seven beta-strand family","termid":"PBO:0087208"}


id: PBO:0039653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 1","termid":"PBO:0039653"}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PomBase:mah","PMID:23395004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: GO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the bundle of His cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during bundle of His cell action potential","synonyms":[{"name":"membrane repolarization during bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086050"}


id: PBO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large subunit Gsa1","termid":"PBO:0001749"}


id: PBO:0068611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 62, pseudogene","termid":"PBO:0068611"}


id: PR:P87177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3D6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.12","secondary_identifiers":["UniProtKB:P87177"],"synonyms":[{"name":"Spom972h-WDR3","type":"exact"}],"termid":"PR:P87177"}


id: GO:1900169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glucocorticoid mediated signaling pathway","termid":"GO:0043402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid mediated signaling pathway","synonyms":[{"name":"regulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900169"}


id: PBO:0045334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 9","termid":"PBO:0045334"}


id: PBO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I2","termid":"PBO:0047799"}


id: PBO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx2","termid":"PBO:0002205"}


id: PBO:0073936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 8","termid":"PBO:0073936"}


id: GO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiotic process mediated by secreted substance (obsolete GO:0052047)","synonyms":[{"name":"interaction with other organism via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with other organism via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052047"}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: PR:P14575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11403:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.04","secondary_identifiers":["UniProtKB:P14575"],"synonyms":[{"name":"SPMIT.04","type":"related"},{"name":"Spom972h-MT-CO3","type":"exact"},{"name":"cytochrome c oxidase polypeptide III (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14575"}


id: PBO:0028753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level_during_cellular_response_to_calcium_starvation","termid":"PBO:0028753"}


id: PBO:0090776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein Meu6","termid":"PBO:0090776"}


id: GO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + a primary alcohol = 2 [Fe(II)cytochrome c] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c) activity","secondary_identifiers":["KEGG_REACTION:R05198","GO:0052935","KEGG_REACTION:R05285","GO:0018468","UM-BBD_enzymeID:e0004","GO:0052936","EC:1.1.2.8","MetaCyc:RXN-11333"],"synonyms":[{"name":"2-chloroethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"PQQ-dependent alcohol dehydrogenase activity","type":"exact"},{"name":"alcohol dehydrogenase (acceptor) activity","type":"broad"},{"name":"alcohol:(acceptor) oxidoreductase activity","type":"related"},{"name":"alcohol:acceptor oxidoreductase activity","type":"related"},{"name":"alcohol:cytochrome c oxidoreductase activity","type":"exact"},{"name":"ethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"quinoprotein alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0052934"}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: GO:0070917
data:
  {"annotated_genes":["SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90802],"is_not":false,"summary":null,"term":"GO:0070917"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of inositol phosphoceramide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"inositol phosphoceramide synthase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase regulator activity","type":"exact"}],"termid":"GO:0070917","terms_by_termid":{"GO:0070917":null}}


id: GO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + O2 = 2,3,4,5-tetrahydropyridine-2-carboxylate + H2O2 + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["EC:1.5.3.7","RHEA:11992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-pipecolate oxidase activity","secondary_identifiers":["KEGG_REACTION:R02204","MetaCyc:L-PIPECOLATE-OXIDASE-RXN","Reactome:R-HSA-6783880"],"synonyms":[{"name":"L-pipecolate:oxygen 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolic acid oxidase activity","type":"related"}],"termid":"GO:0050031"}


id: PBO:0076355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 2","termid":"PBO:0076355"}


id: PBO:0050881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 2","termid":"PBO:0050881"}


id: GO:0014802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"terminal cisterna","secondary_identifiers":["Wikipedia:Terminal_cisterna"],"termid":"GO:0014802"}


id: GO:0060240
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the series signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"negative regulation of signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060240","terms_by_termid":{"GO:0090029":null}}


id: PBO:0045878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 2","termid":"PBO:0045878"}


id: GO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A slow mechanism of blood pressure regulation that responds to changes in pressure resulting from fluid and salt intake by modulating the quantity of blood in the circulatory system.","definition_xrefs":["GOC:dph","GOC:tb","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process involved in regulation of blood volume","synonyms":[{"name":"renal blood volume control of blood pressure","type":"related"},{"name":"renal regulation of blood volume","type":"related"}],"termid":"GO:0001977"}


id: GO:1905525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter in response to iron that results in regulation of ferrichrome biosynthetic process.","definition_xrefs":["PMID:20435771","GO_REF:0000063","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:1905525)","synonyms":[{"name":"regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905525"}


id: GO:0070178
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["CHEBI:16523","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-serine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-serine metabolism","type":"exact"}],"termid":"GO:0070178","terms_by_termid":{"GO:0036088":null}}


id: PBO:0027266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_cell_divisions_prior_to_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027266"}


id: PBO:0082131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-binding protein; involved in bundling of actin filaments and endocytosis of actin cortical patches; activity stimulated by Las17p; contains SH3 domain similar to Rvs167p; YSC84 has a paralog, LSB3, that arose from the whole genome duplication","termid":"PBO:0082131"}


id: PBO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted), possible alternative UTR","termid":"PBO:0000149"}


id: GO:0018081
data:
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id: PR:Q09196
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id: GO:0038071
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id: PBO:0068114
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id: PBO:0057623
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id: GO:0010564
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process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0010564","terms_by_termid":{"GO:0000077":null,"GO:0001100":null,"GO:0007088":null,"GO:0007089":null,"GO:0007091":null,"GO:0007094":null,"GO:0007095":null,"GO:0007096":null,"GO:0010389":null,"GO:0010520":null,"GO:0010571":null,"GO:0010845":null,"GO:0010846":null,"GO:0010971":null,"GO:0010972":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031536":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031991":null,"GO:0032215":null,"GO:0032888":null,"GO:0032955":null,"GO:0033047":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0045128":null,"GO:0045836":null,"GO:0045841":null,"GO:0045842":null,"GO:0045875":null,"GO:0046604":null,"GO:0051598":null,"GO:0060236":null,"GO:0060629":null,"GO:0062123":null,"GO:0062209":null,"GO:0070317":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090267":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:0140429":null,"GO:0140434":null,"GO:0140499":null,"GO:0140648":null,"GO:0140748":null,"GO:1900087":null,"GO:1901673":null,"GO:1901970":null,"GO:1901987":null,"GO:1901993":null,"GO:1902103":null,"GO:1902412":null,"GO:1902413":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902472":null,"GO:1902845":null,"GO:1902846":null,"GO:1903024":null,"GO:1903380":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905287":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905406":null,"GO:1905412":null,"GO:1905557":null,"GO:1905757":null,"GO:1905758":null,"GO:1905824":null,"GO:1990949":null,"GO:1990950":null,"GO:2000045":null,"GO:2000134":null,"GO:2000816":null}}


id: PBO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 2","termid":"PBO:0043430"}


id: GO:0106091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating an elongation or projection from a glial cell.","definition_xrefs":["GOC:ha","PMID:27131624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"glial cell development","termid":"GO:0021782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation","termid":"GO:0106091"}


id: FYPO:0006817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006817"}


id: _global:causally_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within,_negative_effect","termid":"_global:causally_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","secondary_identifiers":["RO:0002305"],"termid":"_global:causally_upstream_of,_negative_effect"}


id: PBO:0073147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog A, COPII coat complex component","termid":"PBO:0073147"}


id: FYPO:0005746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased when the cell is subject to glucose starvation. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein export from nucleus during glucose starvation","synonyms":[{"name":"decreased protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein export from nucleus during glucose depletion","type":"exact"},{"name":"decreased protein export from nucleus during glucose deprivation","type":"exact"},{"name":"decreased protein export from nucleus during glucose limitation","type":"related"},{"name":"reduced protein export from nucleus during glucose starvation","type":"exact"}],"termid":"FYPO:0005746"}


id: GO:1990207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex capable of transporting positively charged hydrophobic drugs across the plasma membrane thereby involved in conferring resistance to a wide range of toxic compounds (e.g. methyl viologen, ethidium bromide and acriflavine). It is commonly found in bacteria. In E. coli it forms a homodimer.","definition_xrefs":["PMID:18024586","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EmrE multidrug transporter complex","synonyms":[{"name":"EmrE complex","type":"narrow"}],"termid":"GO:1990207"}


id: PBO:0078533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 26","termid":"PBO:0078533"}


id: PBO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 17","termid":"PBO:0071411"}


id: GO:1904245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["GOC:kmv","PMID:19460348","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polynucleotide adenylyltransferase activity","synonyms":[{"name":"regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of NTP polymerase activity","type":"exact"},{"name":"regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"regulation of RNA formation factors, PF1","type":"related"},{"name":"regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"regulation of poly(A) hydrolase activity","type":"exact"},{"name":"regulation of poly(A) polymerase activity","type":"exact"},{"name":"regulation of poly(A) synthetase activity","type":"exact"},{"name":"regulation of poly-A polymerase activity","type":"exact"},{"name":"regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of polyadenylate polymerase activity","type":"exact"},{"name":"regulation of polyadenylate synthetase activity","type":"exact"},{"name":"regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"regulation of polyadenylic polymerase activity","type":"exact"},{"name":"regulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904245"}


id: PR:Q10439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An Xaa-Pro aminopeptidase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01897","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate cleaving peptidase 55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.05","secondary_identifiers":["UniProtKB:Q10439"],"synonyms":[{"name":"Spom972h-XPNPEP3","type":"exact"}],"termid":"PR:Q10439"}


id: PBO:0030009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell","termid":"PBO:0030009"}


id: GO:0140710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"regulation of FNI","type":"broad"},{"name":"regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140710"}


id: GO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0051179"],"is_obsolete":false,"name":"callose deposition in cell wall","synonyms":[{"name":"callose localization in cell wall","type":"exact"},{"name":"cell wall callose deposition","type":"exact"},{"name":"cell wall callose localization","type":"exact"}],"termid":"GO:0052543"}


id: FYPO:0008051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is decreased.","definition_xrefs":["PMID:28572513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased ubiquitin ligase activity","termid":"FYPO:0008051"}


id: PBO:0085438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; HRB1 has a paralog, GBP2, that arose from the whole genome duplication","termid":"PBO:0085438"}


id: FYPO:0004788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation during glucose starvation (obsolete FYPO:0004788)","synonyms":[{"name":"increased peptidyl-serine phosphorylation during glucose starvation","type":"exact"},{"name":"increased protein serine phosphorylation during cellular response to glucose starvation","type":"exact"},{"name":"increased protein serine phosphorylation during glucose depletion","type":"exact"},{"name":"increased protein serine phosphorylation during glucose deprivation","type":"exact"},{"name":"increased protein serine phosphorylation during glucose limitation","type":"related"},{"name":"increased serine phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0004788"}


id: PBO:0075780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 6","termid":"PBO:0075780"}


id: PBO:0053420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 362","termid":"PBO:0053420"}


id: PBO:0067620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 792, pseudogene","termid":"PBO:0067620"}


id: PBO:0081748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 678","termid":"PBO:0081748"}


id: GO:0015515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: citrate(out) + succinate(in) = citrate(in) + succinate(out).","definition_xrefs":["TC:2.A.47.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"citrate secondary active transmembrane transporter activity","termid":"GO:0071913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"citrate:succinate antiporter activity","termid":"GO:0015515"}


id: GO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-bis(4-hydroxyphenyl)-2-propanol = 4,4'-dihydroxy-alpha-methylstilbene + H2O.","definition_xrefs":["UM-BBD_reactionID:r0862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"1,2-bis(4-hydroxyphenyl)-2-proponol dehydratase activity","termid":"GO:0034561"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: CHEBI:4031
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclosporin A","termid":"CHEBI:4031"}


id: GO:0030634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of carbon dioxide fixation in which one molecule of acetyl-CoA is completely synthesized from two molecules of carbon dioxide (CO2).","definition_xrefs":["PMID:11607093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"carbon fixation by acetyl-CoA pathway","secondary_identifiers":["Wikipedia:Wood-Ljungdahl_pathway","MetaCyc:CODH-PWY"],"synonyms":[{"name":"Ljungdahl-Wood pathway","type":"exact"},{"name":"acetyl CoA pathway","type":"related"},{"name":"reductive acetyl CoA pathway","type":"exact"}],"termid":"GO:0030634"}


id: PBO:0059997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 17","termid":"PBO:0059997"}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["RHEA:11120","EC:4.2.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0608","MetaCyc:R524-RXN"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: GO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteinization","secondary_identifiers":["Wikipedia:Luteal_phase","Wikipedia:Luteinization"],"synonyms":[{"name":"luteal phase","type":"related"}],"termid":"GO:0001553"}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tetrachlorobenzene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034935"}


id: GO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-amino acid deamination to pyruvic acid","termid":"GO:0018387"}


id: PBO:0049862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA","termid":"PBO:0049862"}


id: PBO:0069283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 539, pseudogene","termid":"PBO:0069283"}


id: GO:0097321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell switches from growing as a filament (elongated cells attached end-to-end) to growing as a round budding cell. An example of this is observed in Candida albicans.","definition_xrefs":["GOC:di","PMID:14617167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, filamentous to budding","termid":"GO:0097321"}


id: PBO:0067888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 190","termid":"PBO:0067888"}


id: PBO:0108544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13","termid":"PBO:0108544"}


id: PBO:0088446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease","termid":"PBO:0088446"}


id: PBO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repreat protein Ppr6","termid":"PBO:0005510"}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0041723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase ID","termid":"PBO:0041723"}


id: SO:1000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome is the aneuploid product of recombination between a pericentric inversion and a cytologically wild-type chromosome.","definition_xrefs":["PMID:6804304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosynaptic_chromosome","synonyms":[{"name":"(Drosophila)A","type":"related"},{"name":"autosynaptic chromosome","type":"exact"}],"termid":"SO:1000136"}


id: PBO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-b","termid":"PBO:0002364"}


id: GO:0006636
data:
  {"annotated_genes":["SJAG_03943","SJAG_00099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69970,110457],"is_not":false,"summary":null,"term":"GO:0006636"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms.","definition_xrefs":["GOC:mah","MetaCyc:PWY-762","MetaCyc:PWY-782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"unsaturated fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid desaturation","type":"related"},{"name":"polyunsaturated fatty acid biosynthesis","type":"narrow"},{"name":"unsaturated fatty acid anabolism","type":"exact"},{"name":"unsaturated fatty acid biosynthesis","type":"exact"},{"name":"unsaturated fatty acid formation","type":"exact"},{"name":"unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:0006636","terms_by_termid":{"GO:0006636":null}}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018574"}


id: PBO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.6","termid":"PBO:0004835"}


id: GO:1901845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:17130302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication by electrical coupling","termid":"GO:0010651"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"},{"relation_name":"negatively_regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by electrical coupling involved in cardiac conduction","synonyms":[{"name":"down regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"down-regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"downregulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"inhibition of cell communication by electrical coupling involved in cardiac conduction","type":"narrow"}],"termid":"GO:1901845"}


id: PBO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein","termid":"PBO:0045459"}


id: GO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen dioxide","synonyms":[{"name":"response to NO2","type":"exact"}],"termid":"GO:0035713"}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:12956429","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: PBO:0063432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 6","termid":"PBO:0063432"}


id: GO:0140440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an oleoyl (systematic name, (9Z)-octadecenoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: (9Z)-octadecenoyl-CoA + L-cysteinyl-[protein] = CoA + S-(9Z-octadecenoyl)-L-cysteinyl-[protein].","definition_xrefs":["PMID:22247542","RHEA:59744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-oleoyltransferase activity","termid":"GO:0140440"}


id: PBO:0039718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC3A and APOBEC3B deletion hybrid","termid":"PBO:0039718"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: PBO:0081490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385B","termid":"PBO:0081490"}


id: PBO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Imp2","termid":"PBO:0090500"}


id: PBO:0051973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"izumo sperm-oocyte fusion 1","termid":"PBO:0051973"}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["RESID:AA0116","GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: PBO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shape and Conjugation Deficiency","termid":"PBO:0002091"}


id: PBO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0030755"}


id: PBO:0045525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTWD1 pseudogene 1","termid":"PBO:0045525"}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"published","termid":"PBO:0000001"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: GO:0008893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine 3',5'-bis(diphosphate) + H2O = guanosine 5'-diphosphate + diphosphate.","definition_xrefs":["EC:3.1.7.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity","secondary_identifiers":["RHEA:14253","MetaCyc:PPGPPSYN-RXN"],"synonyms":[{"name":"(ppGpp)ase activity","type":"related"},{"name":"PpGpp phosphohydrolase activity","type":"related"},{"name":"PpGpp-3'-pyrophosphohydrolase activity","type":"related"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-diphosphohydrolase activity","type":"exact"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-pyrophosphatase activity","type":"related"},{"name":"guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase activity","type":"exact"},{"name":"penta-phosphate guanosine-3'-diphosphohydrolase activity","type":"related"},{"name":"penta-phosphate guanosine-3'-pyrophosphohydrolase activity","type":"related"}],"termid":"GO:0008893"}


id: PBO:0053722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 934","termid":"PBO:0053722"}


id: PBO:0057763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR2052 host gene","termid":"PBO:0057763"}


id: GO:0043115
data:
  {"annotated_genes":["SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93512],"is_not":false,"summary":null,"term":"GO:0043115"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + precorrin-2 = 2 H+ + NADH + sirohydrochlorin.","definition_xrefs":["EC:1.3.1.76","RHEA:15613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-2 dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIMETHUROPORDEHYDROG-RXN","KEGG_REACTION:R03947"],"synonyms":[{"name":"1,3-dimethyluroporphyrinogen III dehydrogenase activity","type":"exact"},{"name":"CysG","type":"related"},{"name":"Met8p","type":"related"},{"name":"SirC","type":"related"},{"name":"dihydrosirohydrochlorin dehydrogenase activity","type":"exact"},{"name":"precorrin-2 oxidase activity","type":"related"},{"name":"precorrin-2:NAD+ oxidoreductase activity","type":"related"},{"name":"siroheme synthase activity","type":"broad"}],"termid":"GO:0043115","terms_by_termid":{"GO:0043115":null}}


id: SO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uridine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_uridine","synonyms":[{"name":"modified uridine","type":"exact"}],"termid":"SO:0001277"}


id: PBO:0064145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 2","termid":"PBO:0064145"}


id: GO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mah","GOC:pg","PMID:5002049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"activation of aggregate size","type":"narrow"},{"name":"stimulation of aggregate size","type":"narrow"},{"name":"up regulation of aggregate size","type":"exact"},{"name":"up-regulation of aggregate size","type":"exact"},{"name":"upregulation of aggregate size","type":"exact"}],"termid":"GO:0031159"}


id: MOD:00234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glutathionyl-L-cysteine.","definition_xrefs":["PubMed:8344916","RESID:AA0229","Unimod:55","OMSSA:51","ChEBI:21264","DeltaMass:0","PubMed:3083866"],"direct_ancestors":[{"relation_name":"contains","term_name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine glutathione disulfide","synonyms":[{"name":"(2S)-2-amino-3-((2S)-2-((4R)-4-amino-4-carboxyl-1-oxobutyl)amino-3-(carboxylmethyl)amino-3-oxo-propyl)dithio-propanoic acid","type":"exact"},{"name":"Glutathionation","type":"exact"},{"name":"Glutathione","type":"related"},{"name":"L-cysteine glutathione disulfide","type":"exact"},{"name":"L-gamma-glutamyl-L-cysteinyl-glycine (2-1')-disulfide with L-cysteine","type":"exact"},{"name":"MOD_RES S-glutathionyl cysteine","type":"exact"},{"name":"N-(N-gamma-glutamyl-cystinyl)-glycine","type":"exact"},{"name":"SGltCys","type":"exact"},{"name":"cysteinyl glutathione","type":"exact"},{"name":"glutathione disulfide","type":"related"},{"name":"glutathionec","type":"exact"}],"termid":"MOD:00234"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_02009","SJAG_06621","SJAG_01310","SJAG_04660","SJAG_03373","SJAG_03828","SJAG_02945","SJAG_04334","SJAG_00027","SJAG_03903","SJAG_06622","SJAG_02135","SJAG_02369","SJAG_03660","SJAG_02107","SJAG_04192","SJAG_00839","SJAG_03958","SJAG_00461","SJAG_04495","SJAG_03174","SJAG_02010","SJAG_00605","SJAG_01209","SJAG_04276","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91426,90675,96958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[101299,104847,104848,105316,93708,105317,105318,90166,104845,101690,101689,104849,105321,112437,105319,101300,105322,104846,105320,90670,104843,104844,99203,100302,101301,99472,93988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[90677,91427,96959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[104815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[115110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019388":null,"GO:0019568":null,"GO:0042843":null,"GO:0061621":null}}


id: GO:1904236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"negatively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"down regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"inhibition of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"inhibition of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"negative regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904236"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0271","PubMed:12709052","PubMed:9237682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: MOD:01985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-asparagine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-asparagine.","definition_xrefs":["RESID:AA0622","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-asparagine residue","termid":"MOD:02060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-asparagine","synonyms":[{"name":"(2S)-2,4-diamino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-asparagine","type":"exact"}],"termid":"MOD:01985"}


id: FYPO:0000895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to one or both sides of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"},{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"mitochondrial aggregation","secondary_identifiers":["FYPO:0000896"],"synonyms":[{"name":"aggregated mitochondria","type":"exact"},{"name":"mitochondrial aggregation at cell end","type":"related"},{"name":"mitochondrial aggregation at cell tip","type":"related"},{"name":"mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0000895"}


id: GO:0150035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by BDNF, modulating synaptic transmission.","definition_xrefs":["PMID:19448629","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0150035"}


id: PBO:0026713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026713"}


id: GO:0085034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts an NF-kappaB-mediated signaling cascade in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18250452","PMID:22442494","PMID:24648522","PMID:33567255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host NF-kappaB cascade","termid":"GO:0085032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host NF-kappaB cascade","secondary_identifiers":["VZ:695"],"synonyms":[{"name":"disruption of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"disruption of host canonical NF-kappaB cascade","type":"related"},{"name":"negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"suppression by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"symbiont-mediated suppression of host canonical NF-kappaB cascade","type":"related"}],"termid":"GO:0085034"}


id: FYPO:0000924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of anisomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to anisomycin","synonyms":[{"name":"resistance to anisomycin during mitotic cell cycle","type":"related"},{"name":"resistance to anisomycin during vegetative growth","type":"exact"},{"name":"resistant to anisomycin","type":"exact"}],"termid":"FYPO:0000924"}


id: GO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = alpha-humulene + diphosphate.","definition_xrefs":["PMID:12566586","RHEA:31895","PMID:9442047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0009975","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-humulene synthase activity","secondary_identifiers":["MetaCyc:RXN-8415","EC:4.2.3.104"],"termid":"GO:0080017"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: FYPO:0006455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis I","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006455"}


id: PBO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pal1 family protein","termid":"PBO:0004131"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: GO:0000749
data:
  {"annotated_genes":["SJAG_00993","SJAG_03209","SJAG_02923","SJAG_03340","SJAG_00990","SJAG_01978","SJAG_01345","SJAG_02233","SJAG_01718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101368],"is_not":false,"summary":null,"term":"GO:0000749"},{"annotations":[84733,92060,92739,102146,103019,87725,88933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[83610],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus that positively regulates the process of conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"response to pheromone triggering conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030434","GO:0007328"],"synonyms":[{"name":"response to pheromone during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000749","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: PBO:0055423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2853","termid":"PBO:0055423"}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: SO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:upstream","type":"related"},{"name":"Jannovar:upstream_gene_variant","type":"exact"},{"name":"VEP:upstream_gene_variant","type":"exact"},{"name":"snpEff:UPSTREAM","type":"exact"},{"name":"upstream gene variant","type":"exact"}],"termid":"SO:0001631"}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: GO:0043718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxymethyl)glutarate + NAD+ = 2-formylglutarate + H+ + NADH.","definition_xrefs":["EC:1.1.1.291","RHEA:15505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxymethylglutarate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07985","MetaCyc:1.1.1.291-RXN","Wikipedia:2-hydroxymethylglutarate_dehydrogenase"],"synonyms":[{"name":"(S)-2-hydroxymethylglutarate:NAD+ oxidoreductase activity","type":"related"},{"name":"HgD","type":"exact"}],"termid":"GO:0043718"}


id: PBO:0074102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 5","termid":"PBO:0074102"}


id: PR:Q10175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27F1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase C27F1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.06c","synonyms":[{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC27F1.06c","type":"exact"}],"termid":"PR:Q10175"}


id: PBO:0075971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 13","termid":"PBO:0075971"}


id: GO:0018906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl tert-butyl ether, 2-methoxy-2-methylpropane. Methyl tert-butyl ether is a synthetic chemical which is mixed with gasoline for use in reformulated gasoline. It was first introduced as an additive for unleaded gasoline in the 1980s. It is also used as a laboratory reagent and a pharmaceutical agent.","definition_xrefs":["UM-BBD_pathwayID:mtb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methyl tert-butyl ether metabolic process","synonyms":[{"name":"methyl tert-butyl ether metabolism","type":"exact"}],"termid":"GO:0018906"}


id: PBO:0031582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate","termid":"PBO:0031582"}


id: GO:0021771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","ISBN:0878937420","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"thalamus development","termid":"GO:0021794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral geniculate nucleus development","synonyms":[{"name":"LGN development","type":"exact"}],"termid":"GO:0021771"}


id: PBO:0031024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031024"}


id: PBO:0082649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of several different pre-ribosomal particles; forms a complex with Ytm1p and Erb1p that is required for maturation of the large ribosomal subunit; required for exit from G<sub>0</sub> and the initiation of cell proliferation","termid":"PBO:0082649"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["GOC:sl","PMID:7061416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0058840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8070","termid":"PBO:0058840"}


id: PBO:0042258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4","termid":"PBO:0042258"}


id: PBO:0040136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 2","termid":"PBO:0040136"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: PBO:0028280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0028280"}


id: GO:0044614
data:
  {"annotated_genes":["SJAG_03847","SJAG_03299","SJAG_01065","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84497,89616,98800,104608],"is_not":false,"summary":null,"term":"GO:0044614"}]},"cv_name":"cellular_component","definition":"Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component.","definition_xrefs":["PMID:22419078","PMID:18046406","GOC:dgf","PMID:19524430","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01065":null,"SJAG_03299":null,"SJAG_03847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005643"],"is_obsolete":false,"name":"nuclear pore cytoplasmic filaments","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic fibers of the NPC","type":"exact"},{"name":"cytoplasmic fibers of the nuclear pore complex","type":"exact"}],"termid":"GO:0044614","terms_by_termid":{"GO:0044614":null}}


id: PBO:0084994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent quinone reductase; GFP-tagged protein localizes to the cytoplasm and nucleus; has similarity to E. coli quinone oxidoreductase and to human zeta-crystallin","termid":"PBO:0084994"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: PBO:0002642
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.10","termid":"PBO:0002642"}


id: GO:0102089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + O2 = dehydroscoulerine + hydrogen peroxide + H+.","definition_xrefs":["GOC:pz","EC:1.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dehydroscoulerine synthase activity","secondary_identifiers":["MetaCyc:RXN-10888"],"termid":"GO:0102089"}


id: GO:1990417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of snoRNA from pre-rRNA.","definition_xrefs":["GOC:rb","PMID:16908538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"snoRNA release from pre-rRNA","termid":"GO:1990417"}


id: GO:0099589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting a signal across a membrane by activating some effector activity. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin receptor activity","termid":"GO:0099589"}


id: PBO:0071863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 1","termid":"PBO:0071863"}


id: PBO:0012853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWo Spored","termid":"PBO:0012853"}


id: PBO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q12.2)","termid":"PBO:0047951"}


id: GO:0021899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dgh","PMID:16226447","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021899"}


id: PBO:0088319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mia40-Erv1 disulfide relay system thiol oxidase subunit Mia40","termid":"PBO:0088319"}


id: MOD:00902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: GO:0033002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a muscle cell population by cell division.","definition_xrefs":["GOC:mah","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell proliferation","synonyms":[{"name":"myocyte proliferation","type":"exact"}],"termid":"GO:0033002"}


id: GO:0033337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin development","termid":"GO:0033337"}


id: GO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal dipeptide, Xaa-Xbb from oligopeptide-Xaa-Xbb, when Xaa is not Pro, and Xbb is neither Asp nor Glu. Converts angiotensin I to angiotensin II.","definition_xrefs":["EC:3.4.15.1"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dipeptidase A activity (obsolete GO:0004246)","secondary_identifiers":["MetaCyc:3.4.15.1-RXN"],"synonyms":[{"name":"ACE activity","type":"broad"},{"name":"DCP","type":"related"},{"name":"PDH","type":"related"},{"name":"angiotensin I-converting enzyme activity","type":"related"},{"name":"angiotensin converting enzyme","type":"related"},{"name":"carboxycathepsin activity","type":"related"},{"name":"dipeptide hydrolase","type":"broad"},{"name":"dipeptidyl carboxypeptidase I activity","type":"related"},{"name":"endothelial cell peptidyl dipeptidase activity","type":"related"},{"name":"kininase II activity","type":"related"},{"name":"peptidase P activity","type":"related"},{"name":"peptidyl dipeptidase A","type":"related"},{"name":"peptidyl dipeptidase I activity","type":"related"},{"name":"peptidyl dipeptidase-4","type":"related"},{"name":"peptidyl dipeptide hydrolase activity","type":"related"},{"name":"peptidyl-dipeptidase A activity","type":"exact"},{"name":"peptidyl-dipeptide hydrolase activity","type":"related"},{"name":"peptidyldipeptide hydrolase activity","type":"related"}],"termid":"GO:0004246"}


id: PBO:0087807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target membrane receptor (t-SNARE); for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin","termid":"PBO:0087807"}


id: FYPO:0004290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"decreased microsatellite DNA binding","synonyms":[{"name":"decreased microsatellite repeat binding","type":"exact"},{"name":"reduced microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004290"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: GO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi ribbon formation","termid":"GO:0090161"}


id: PBO:0064847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14A","termid":"PBO:0064847"}


id: PBO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 4","termid":"PBO:0072307"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: PBO:0011146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase (predicted)","termid":"PBO:0011146"}


id: PBO:0029155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse","termid":"PBO:0029155"}


id: GO:0060368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway..","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060368"}


id: PBO:0067008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 15, pseudogene","termid":"PBO:0067008"}


id: PBO:0088382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16","termid":"PBO:0088382"}


id: PR:O94539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pam17 gene.","definition_xrefs":["UniProtKB:O94539","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocated-associated motor subunit pam17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.04","synonyms":[{"name":"Spom972h-pam17","type":"exact"}],"termid":"PR:O94539"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: PBO:0040623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 2","termid":"PBO:0040623"}


id: GO:0035588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular purine or purine derivative binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF","PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"purinergic nucleotide receptor signaling pathway","termid":"GO:0035590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled purinergic receptor signaling pathway","synonyms":[{"name":"G-protein coupled purinergic receptor signaling pathway","type":"exact"},{"name":"G-protein coupled purinergic receptor signalling pathway","type":"exact"}],"termid":"GO:0035588"}


id: PBO:0051374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-5 (pseudogene)","termid":"PBO:0051374"}


id: GO:0005832
data:
  {"annotated_genes":["SJAG_04121","SJAG_03570","SJAG_03320","SJAG_00447","SJAG_00609","SJAG_02926","SJAG_01002","SJAG_02378"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84331,87662,97605,98632,102087,103217,105140,107310],"is_not":false,"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor.","definition_xrefs":["GOC:sgd_curators","PMID:11580267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"chaperonin-containing T-complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CCT particle","type":"exact"},{"name":"TriC","type":"exact"}],"termid":"GO:0005832","terms_by_termid":{"GO:0005832":null}}


id: PBO:0026647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0026647"}


id: GO:0051492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"regulation of stress fiber assembly","synonyms":[{"name":"regulation of stress fibre biosynthesis","type":"related"},{"name":"regulation of stress fibre formation","type":"exact"}],"termid":"GO:0051492"}


id: PBO:0030695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione-disulfide_reductase_activity","termid":"PBO:0030695"}


id: GO:0000949
data:
  {"annotated_genes":["SJAG_04842","SJAG_03743","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83988,92961,92962],"is_not":false,"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of aromatic amino acids to produce aromatic alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanol, 4-hydroxyphenylethanol, or tryptophol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000949","terms_by_termid":{"GO:0000949":null}}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: PR:O94645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymocyte nuclear protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.03c","secondary_identifiers":["UniProtKB:O94645"],"synonyms":[{"name":"Spom972h-THYN1","type":"exact"}],"termid":"PR:O94645"}


id: FYPO:0002253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal septum location","synonyms":[{"name":"normal septum location during mitotic cell cycle","type":"related"},{"name":"normal septum location during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"},{"name":"normally localized septum","type":"exact"}],"termid":"FYPO:0002253"}


id: PBO:0084023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase involved in protein glycosylation; transfers GDP-mannose to methyl-alpha-mannoside in vitro; member of the KRE2/MNT1 mannosyltransferase family of type II membrane proteins with a short cytoplasmic N-terminus, a membrane-spanning region and a highly conserved catalytic lumenal domain","termid":"PBO:0084023"}


id: PBO:0079605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 2","termid":"PBO:0079605"}


id: GO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, centromeric","termid":"GO:0071962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071960"}


id: PBO:0049092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 149","termid":"PBO:0049092"}


id: PBO:0084237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Imidazole glycerol phosphate synthase; glutamine amidotransferase:cyclase that catalyzes the fifth step of histidine biosynthesis and also produces 5-aminoimidazole-4-carboxamide ribotide (AICAR), a purine precursor","termid":"PBO:0084237"}


id: PBO:0051522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein","termid":"PBO:0051522"}


id: GO:0060884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which cells are removed from the inner loop of a semicircular canal.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate","termid":"GO:0060884"}


id: PBO:0014569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arp2/3 protein complex, actin-like protein subunit Arp3","termid":"PBO:0014569"}


id: GO:0051107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA ligation","termid":"GO:0051105"},{"relation_name":"negatively_regulates","term_name":"DNA ligation","termid":"GO:0006266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA ligation","synonyms":[{"name":"down regulation of DNA ligation","type":"exact"},{"name":"down-regulation of DNA ligation","type":"exact"},{"name":"downregulation of DNA ligation","type":"exact"},{"name":"inhibition of DNA ligation","type":"narrow"}],"termid":"GO:0051107"}


id: FYPO:0004575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004575"}


id: GO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-lactam antibiotic biosynthetic process","synonyms":[{"name":"beta-lactam antibiotic anabolism","type":"exact"},{"name":"beta-lactam antibiotic biosynthesis","type":"exact"},{"name":"beta-lactam antibiotic formation","type":"exact"},{"name":"beta-lactam antibiotic synthesis","type":"exact"}],"termid":"GO:0030654"}


id: SO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by another molecule.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_factor","synonyms":[{"name":"bound by factor","type":"exact"}],"termid":"SO:0000277"}


id: PBO:0085753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication","termid":"PBO:0085753"}


id: FYPO:0000727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally.","definition_xrefs":["GO:0007015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin filament organization during vegetative growth","synonyms":[{"name":"abnormal actin filament organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of actin filament localization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000727"}


id: GO:0090550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molybdenum starvation","termid":"GO:0090550"}


id: PBO:0066576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB like 1","termid":"PBO:0066576"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: PBO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial E3 ubiquitin protein ligase 1","termid":"PBO:0060205"}


id: GO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a leukocyte. A leukocyte is an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.","definition_xrefs":["CL:0000738","GOC:add","PMID:16551264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte differentiation","synonyms":[{"name":"immune cell differentiation","type":"exact"},{"name":"leucocyte differentiation","type":"exact"}],"termid":"GO:0002521"}


id: GO:0060106
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cuticle layer that lies directly beneath the lipid-containing epicuticle. The cortical layer contains collagens and insoluble, non-collagenous cuticulins and is characterized by a distinct annular pattern consisting of regularly spaced annular ridges delineated by annular furrows. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:kmv","GOC:dph","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}


id: PBO:0011170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein","termid":"PBO:0011170"}


id: SO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding motif with the consensus sequence TTAGGG to which Teb1 binds.","definition_xrefs":["PMID:23314747","PMID:27901072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teb1_recognition_motif","synonyms":[{"name":"teb1 recognition motif","type":"exact"}],"termid":"SO:0002258"}


id: PR:Q9P3U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-related modifier 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14986:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-related modifier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.04","secondary_identifiers":["UniProtKB:Q9P3U9"],"synonyms":[{"name":"SPCC548.04","type":"related"},{"name":"Spom972h-URM1","type":"exact"}],"termid":"PR:Q9P3U9"}


id: PBO:0077668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13C","termid":"PBO:0077668"}


id: PBO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec67","termid":"PBO:0090439"}


id: GO:1900111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 dimethylation (obsolete GO:1900111)","synonyms":[{"name":"activation of histone H3 K9 dimethylation","type":"narrow"},{"name":"activation of histone H3-K9 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900111"}


id: GO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052481)","synonyms":[{"name":"negative modulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052481"}


id: GO:0007105
data:
  {"annotated_genes":["SJAG_03309","SJAG_02380","SJAG_02838","SJAG_01889","SJAG_00845","SJAG_01215","SJAG_03596","SJAG_00807","SJAG_02392","SJAG_01787","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104771,106711,83746,115432,91999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[86293,106713,99531,115433,91527],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[83317,107337,97166],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"The process in which a contractile ring is positioned in a specific location. This process is critical for both for both symmetric and asymmetric cell divisions.","definition_xrefs":["PMID:28162898","PMID:26553932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01215":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null,"SJAG_03596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0010687"],"synonyms":[{"name":"contractile ring localization","type":"related"},{"name":"cytokinesis, site selection","type":"exact"},{"name":"division plane positioning","type":"exact"},{"name":"site selection involved in cell cycle cytokinesis","type":"exact"},{"name":"site selection involved in cytokinesis","type":"exact"}],"termid":"GO:0007105","terms_by_termid":{"GO:1902408":null,"GO:1902472":null,"GO:1903617":null}}


id: GO:0004822
data:
  {"annotated_genes":["SJAG_03545","SJAG_04285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108635,112128],"is_not":false,"summary":null,"term":"GO:0004822"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-isoleucine + ATP + tRNA(Ile) = L-isoleucyl-tRNA(Ile) + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.1.1.5","RHEA:11060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03545":null,"SJAG_04285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0140098","GO:0003674","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"isoleucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380176","KEGG_REACTION:R03656","MetaCyc:ISOLEUCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379893"],"synonyms":[{"name":"L-isoleucine:tRNAIle ligase (AMP-forming)","type":"related"},{"name":"isoleucine translase activity","type":"related"},{"name":"isoleucine-tRNA synthetase activity","type":"related"},{"name":"isoleucine-transfer RNA ligase activity","type":"related"},{"name":"isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"isoleucyl-transfer RNA synthetase activity","type":"related"},{"name":"isoleucyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004822","terms_by_termid":{"GO:0004822":null}}


id: GO:1901999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogentisate.","definition_xrefs":["PMID:22980205","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homogentisate metabolic process","synonyms":[{"name":"homogentisate metabolism","type":"exact"}],"termid":"GO:1901999"}


id: GO:0055071
data:
  {"annotated_genes":["SJAG_04975","SJAG_04867","SJAG_01007","SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90993,95971,99627,113068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of manganese ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_04111":null,"SJAG_04867":null,"SJAG_04975":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"manganese ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese homeostasis","type":"broad"}],"termid":"GO:0055071","terms_by_termid":{"GO:0030026":null}}


id: GO:0098815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"}


id: PBO:0044054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SN","termid":"PBO:0044054"}


id: PBO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit (predicted)","termid":"PBO:0005019"}


id: PBO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement","termid":"PBO:0030465"}


id: PBO:0076968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like Y-linked","termid":"PBO:0076968"}


id: PR:O14363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L1-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.18c","synonyms":[{"name":"L10a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl102","type":"exact"}],"termid":"PR:O14363"}


id: PBO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)","termid":"PBO:0003131"}


id: GO:0051005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein lipase activity","termid":"GO:0051004"},{"relation_name":"is_a","term_name":"negative regulation of lipase activity","termid":"GO:0060192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipase activity","synonyms":[{"name":"down regulation of lipoprotein lipase activity","type":"exact"},{"name":"down-regulation of lipoprotein lipase activity","type":"exact"},{"name":"downregulation of lipoprotein lipase activity","type":"exact"},{"name":"inhibition of lipoprotein lipase activity","type":"narrow"}],"termid":"GO:0051005"}


id: GO:0035018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation that will arise in the chitin-based adult cuticle. An example of this process is adult chitin-based cuticle pattern formation in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle pattern formation","termid":"GO:0035017"},{"relation_name":"part_of","term_name":"adult chitin-based cuticle development","termid":"GO:0008365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle pattern formation","synonyms":[{"name":"adult cuticle pattern formation","type":"broad"}],"termid":"GO:0035018"}


id: PBO:0025479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase Yhb1","termid":"PBO:0025479"}


id: PBO:0088654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3","termid":"PBO:0088654"}


id: PBO:0084396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084396"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: GO:0052905
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95151],"is_not":false,"summary":null,"term":"GO:0052905"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine9 in tRNA + S-adenosyl-L-methionine = H+ + N1-methylguanosine9 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0140101","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA (guanosine(9)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12459","Reactome:R-HSA-6787591","Reactome:R-HSA-6786621","EC:2.1.1.221"],"synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N(1)-)-methyltransferase activity","type":"related"},{"name":"tRNA (guanosine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(9)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)G(9) Mtase activity","type":"related"},{"name":"tRNA m(1)G(9)-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))Mtase activity","type":"related"}],"termid":"GO:0052905","terms_by_termid":{"GO:0052905":null}}


id: PR:O74483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15588:SF5","PRO:DNx","OMA:SCHPO05010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.10","secondary_identifiers":["UniProtKB:O74483"],"synonyms":[{"name":"Spom972h-LSM8","type":"exact"}],"termid":"PR:O74483"}


id: PBO:0073784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 4 pseudogene 1","termid":"PBO:0073784"}


id: PBO:0031078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_cytoskeleton_organization_phenotype","termid":"PBO:0031078"}


id: GO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine metabolic process","synonyms":[{"name":"pyridine metabolism","type":"exact"}],"termid":"GO:0019507"}


id: GO:0052103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","PMID:31516360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host induced systemic resistance","termid":"GO:0052159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host induced systemic resistance","secondary_identifiers":["GO:0052532","GO:0052288","GO:0052533"],"synonyms":[{"name":"activation by organism of ISR in host","type":"exact"},{"name":"activation by organism of induced systemic resistance in host","type":"exact"},{"name":"activation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"induction by organism of ISR in host","type":"exact"},{"name":"induction by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host induced systemic resistance","type":"exact"},{"name":"induction by symbiont of induced systemic resistance in host","type":"exact"},{"name":"induction of host induced systemic resistance","type":"exact"},{"name":"positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host induced systemic resistance","type":"related"},{"name":"positive regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"stimulation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"up regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"up-regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"upregulation by symbiont of induced systemic resistance in host","type":"related"}],"termid":"GO:0052103"}


id: GO:0006655
data:
  {"annotated_genes":["SJAG_04317","SJAG_03563","SJAG_03700","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109034,113937,88642,102075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol anabolism","type":"exact"},{"name":"phosphatidylglycerol biosynthesis","type":"exact"},{"name":"phosphatidylglycerol formation","type":"exact"},{"name":"phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:0006655","terms_by_termid":{"GO:0032049":null}}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:26416740","PMID:23242138","PMID:23446421","PMID:28749735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: GO:0071530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an FHA (forkhead-associated) domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR000253"],"gene_count":0,"genotype_count":0,"name":"obsolete FHA domain-mediated complex assembly (obsolete GO:0071530)","synonyms":[{"name":"forkhead-associated domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071530"}


id: GO:1903072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of death-inducing signaling complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:21785459","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of death-inducing signaling complex assembly","synonyms":[{"name":"regulation of DD-mediated complex assembly","type":"exact"},{"name":"regulation of DISC assembly","type":"exact"},{"name":"regulation of DISC formation","type":"exact"},{"name":"regulation of death domain-mediated complex assembly","type":"exact"},{"name":"regulation of death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"regulation of death-inducing signaling complex formation","type":"exact"},{"name":"regulation of death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:1903072"}


id: PBO:0083062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoyl transsuccinylase; component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated","termid":"PBO:0083062"}


id: PBO:0086783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the cell periphery while mCherry fusion protein localizes to both the cell periphery and vacuole; YFL051C is not an essential gene","termid":"PBO:0086783"}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: GO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Usually contains fewer subunits than its eukaryotic counterpart; for example, the E. coli complex contains 12 E1 dimers, 8 E2 trimers, and 6 E3 dimers arranged in highly symmetric cubic order.","definition_xrefs":["ISBN:0471331309","ISBN:0716720094","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic pyruvate dehydrogenase complex (obsolete GO:0045250)","synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"related"}],"termid":"GO:0045250"}


id: PBO:0083653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in pre-rRNA processing at both ends of ITS2; functions with Grc3p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; may coordinate the action of the Rat1p-Rai1p exoRNAse; required for the G1/S cell cycle transition; human ortholog is Las1L; mutants require the SSD1-v allele for viability","termid":"PBO:0083653"}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: PBO:0027585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_homologous_chromosome_segregation","termid":"PBO:0027585"}


id: PBO:0030443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_modification","termid":"PBO:0030443"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"peptidyl-threonine sulfation","termid":"GO:0050985"}


id: PR:O74797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.03c gene.","definition_xrefs":["UniProtKB:O74797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0587 protein C2D10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.03c","synonyms":[{"name":"Spom972h-SPBC2D10.03c","type":"exact"}],"termid":"PR:O74797"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: FYPO:0003007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to caffeine is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to caffeine","synonyms":[{"name":"decreased protein accumulation during cellular response to caffeine","type":"related"},{"name":"decreased protein level during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003007"}


id: PBO:0078788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-2","termid":"PBO:0078788"}


id: GO:0140032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon glycosylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"glycosylation-dependent protein binding","termid":"GO:0140032"}


id: PBO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson's disease","termid":"PBO:0001074"}


id: GO:1900990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of scopolamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete scopolamine catabolic process (obsolete GO:1900990)","synonyms":[{"name":"scopolamine breakdown","type":"exact"},{"name":"scopolamine catabolism","type":"exact"},{"name":"scopolamine degradation","type":"exact"}],"termid":"GO:1900990"}


id: PBO:0038610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 6","termid":"PBO:0038610"}


id: FYPO:0002845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains one or more septa. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen elongated septated vegetative cell","synonyms":[{"name":"inviable enlarged elongated septated vegetative cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated septated vegetative cell","type":"related"},{"name":"lethal; swollen elongated septated vegetative cell","type":"exact"}],"termid":"FYPO:0002845"}


id: PBO:0087538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA is comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing","termid":"PBO:0087538"}


id: PATO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000034 protein concentration (obsolete PATO:0000034)","termid":"PATO:0000034"}


id: PBO:0058014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3940","termid":"PBO:0058014"}


id: FYPO:0000012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins later than normal. The duration of G2 phase is thus longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 phase progression","termid":"FYPO:0000563"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"mitotic G2/M phase transition delay","secondary_identifiers":["FYPO:0000606","FYPO:0000971","FYPO:0000205","FYPO:0000605","FYPO:0000604","FYPO:0000401"],"synonyms":[{"name":"G2/M transition delay during mitotic cell cycle","type":"exact"},{"name":"cell cycle progression through the G2/M phase transition: delayed","type":"related"},{"name":"cell cycle, mitotic G2 delay","type":"related"},{"name":"decreased rate of mitotic G2 phase progression","type":"related"},{"name":"delayed cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"delayed entry into mitosis","type":"exact"},{"name":"delayed mitotic G2 phase progression","type":"related"},{"name":"delayed mitotic entry","type":"exact"},{"name":"delayed onset of mitotic M phase","type":"related"},{"name":"increased duration of mitotic G2 phase","type":"related"},{"name":"increased duration of mitotic G2 phase during vegetative growth","type":"related"},{"name":"increased mitotic G2 duration","type":"related"},{"name":"mitotic DNA replication checkpoint activated","type":"related"},{"name":"mitotic G2 delay","type":"related"},{"name":"mitotic G2/M transition DNA damage checkpoint activated","type":"related"},{"name":"mitotic G2/M transition delay","type":"exact"},{"name":"mitotic G2/M transition delay during vegetative growth","type":"exact"},{"name":"mitotic cell cycle delay at G2/M transition","type":"exact"},{"name":"mitotic cell cycle progression in G2 phase: decreased rate","type":"related"},{"name":"mitotic cell cycle progression in G2 phase: delayed","type":"related"},{"name":"mitotic cell cycle progression in G2 phase: increased duration","type":"related"},{"name":"reduced rate of mitotic G2 phase progression","type":"related"},{"name":"transient cell cycle arrest at mitotic G2/M phase transition","type":"related"},{"name":"transient cell cycle arrest in mitotic G2 phase","type":"related"}],"termid":"FYPO:0000012"}


id: PBO:0059539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site Y","termid":"PBO:0059539"}


id: GO:0048259
data:
  {"annotated_genes":["SJAG_04465","SJAG_04052","SJAG_00649"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114938,106968,107636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00649":null,"SJAG_04052":null,"SJAG_04465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048259","terms_by_termid":{"GO:2000369":null}}


id: PBO:0066256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 4","termid":"PBO:0066256"}


id: GO:0106187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to an oxidoreduction reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to oxidoreductase reactions (obsolete GO:0106187)","secondary_identifiers":["EC:7.1.1.-"],"termid":"GO:0106187"}


id: GO:0102002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylpropanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"valine N-monooxygenase (oxime forming) activity","secondary_identifiers":["RHEA:28606","MetaCyc:1.14.13.118-RXN"],"termid":"GO:0102002"}


id: GO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of an endothelial cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation involved in immune response","synonyms":[{"name":"endothelial cell activation during immune response","type":"related"}],"termid":"GO:0002264"}


id: PBO:0058693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6821","termid":"PBO:0058693"}


id: PBO:0083073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dimeric hypoxanthine-guanine phosphoribosyltransferase; catalyzes the transfer of the phosphoribosyl portion of 5-phosphoribosyl-alpha-1-pyrophosphate to a purine base (either guanine or hypoxanthine) to form pyrophosphate and a purine nucleotide (either guanosine monophosphate or inosine monophosphate); mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0083073"}


id: PBO:0031671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_secretion","termid":"PBO:0031671"}


id: GO:1904771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a doxorubicin stimulus.","definition_xrefs":["PMID:19801496","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to doxorubicin (obsolete GO:1904771)","termid":"GO:1904771"}


id: PBO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein Bzz1 (predicted)","termid":"PBO:0004073"}


id: PBO:0063513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 2","termid":"PBO:0063513"}


id: GO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 = cholest-5-en-3-one + H2O2.","definition_xrefs":["RHEA:32183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol oxidase activity","secondary_identifiers":["EC:1.1.3.6","KEGG_REACTION:R01459","MetaCyc:CHOLESTEROL-OXIDASE-RXN"],"synonyms":[{"name":"3beta-hydroxy steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid:oxygen oxidoreductase activity","type":"related"},{"name":"cholesterol- O2 oxidoreductase activity","type":"related"},{"name":"cholesterol-O2 oxidoreductase activity","type":"related"},{"name":"cholesterol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016995"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: GO:0034952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonate semialdehyde + H+ = acetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"malonate semialdehyde decarboxylase activity","termid":"GO:0034952"}


id: PBO:0047403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 41","termid":"PBO:0047403"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: PBO:0063400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like","termid":"PBO:0063400"}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: PBO:0034515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane_at_cell_division_site_during_vegetative_growth","termid":"PBO:0034515"}


id: PBO:0029016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcript-derived_siRNA_absent","termid":"PBO:0029016"}


id: GO:0071513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes decarboxylation of 4'-phosphopantothenoylcysteine to yield 4'-phosphopantetheine; this is the third step in the biosynthesis of Coenzyme A. The complex is homotrimeric in many eukaryotes, but is a heterotrimer in Saccharomyces.","definition_xrefs":["GOC:jh","PMID:19915539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase complex","termid":"GO:0071513"}


id: PBO:0017962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transmembrane transporter Ctr6","termid":"PBO:0017962"}


id: PBO:0085637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in incorporating iron-sulfur clusters into proteins; mitochondrial matrix protein; involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system","termid":"PBO:0085637"}


id: PBO:0063864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 2","termid":"PBO:0063864"}


id: FYPO:0002653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of vacuolar import, i.e. the transport of substances into the vacuole, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vacuolar transport","termid":"FYPO:0000598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar import","synonyms":[{"name":"decreased vacuolar import during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar import during vegetative growth","type":"exact"},{"name":"decreased vacuolar protein import","type":"narrow"},{"name":"reduced vacuolar import","type":"exact"}],"termid":"FYPO:0002653"}


id: PBO:0045645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 3","termid":"PBO:0045645"}


id: PBO:0065367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSD2 antisense RNA 1","termid":"PBO:0065367"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: PBO:0003083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G (predicted)","termid":"PBO:0003083"}


id: GO:0102702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (+)-2-carene + diphosphoric acid.","definition_xrefs":["PMID:10700382","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-carene synthase activity","secondary_identifiers":["MetaCyc:RXN-5122"],"termid":"GO:0102702"}


id: PBO:0065429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 2","termid":"PBO:0065429"}


id: PBO:0056535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1","termid":"PBO:0056535"}


id: GO:0048185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to activin, a dimer of inhibin-beta subunits.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"activin binding","termid":"GO:0048185"}


id: GO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + O2 = beta-apo-10'-carotenal + beta-ionone.","definition_xrefs":["PMID:11278918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta,beta-carotene-9',10'-dioxygenase activity","synonyms":[{"name":"b,b-carotene-9',10'-dioxygenase activity","type":"exact"}],"termid":"GO:0050541"}


id: GO:0000404
data:
  {"annotated_genes":["SJAG_01262","SJAG_01419","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96342,101811,101945],"is_not":false,"summary":null,"term":"GO:0000404"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.","definition_xrefs":["GOC:elh","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"},{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heteroduplex DNA loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"loop DNA binding","type":"related"}],"termid":"GO:0000404","terms_by_termid":{"GO:0000404":null}}


id: SO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_feature","termid":"SO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"region","synonyms":[{"name":"sequence","type":"exact"}],"termid":"SO:0000001"}


id: GO:0001823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. In mammals, the mesonephros is the second of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the mesonephros will form the mature kidney.","definition_xrefs":["ISBN:0721662544","GOC:dph","ISBN:0124020607","PMID:10535314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephros development","synonyms":[{"name":"Wolffian body development","type":"exact"}],"termid":"GO:0001823"}


id: PBO:0068804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 41, pseudogene","termid":"PBO:0068804"}


id: PBO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.17","termid":"PBO:0005652"}


id: PBO:0029074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation","termid":"PBO:0029074"}


id: PBO:0057657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1249","termid":"PBO:0057657"}


id: FYPO:0006014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell forms multiple mating projections that engage multiple partner cells.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"promiscuous mating","synonyms":[{"name":"conjugation with multiple partner cells","type":"exact"},{"name":"formation of multiple mating projections","type":"related"},{"name":"formation of multiple shmoos","type":"related"},{"name":"mating with multiple partner cells","type":"exact"},{"name":"promiscuous conjugation","type":"exact"}],"termid":"FYPO:0006014"}


id: PBO:0108949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 1","termid":"PBO:0108949"}


id: PBO:0073822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 2","termid":"PBO:0073822"}


id: PBO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 20","termid":"PBO:0048309"}


id: GO:0090694
data:
  {"annotated_genes":["SJAG_00796","SJAG_00682"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85168,91913],"is_not":false,"summary":null,"term":"GO:0090694"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising adherin and the chromatid cohesion factor MAU2/Scc4/Ssl3) required for the loading of a cohesin, complex onto DNA.","definition_xrefs":["GOC:vw","PMID:24291789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Scc2-Scc4 cohesin loading complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mis4-Ssl3 cohesin loading complex","type":"exact"}],"termid":"GO:0090694","terms_by_termid":{"GO:0090694":null}}


id: PBO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe iNhibitor of Growth","termid":"PBO:0001913"}


id: GO:0103086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(5'-methylthio)pentylmalate = 3-(5'-methylthio)pentylmalate.","definition_xrefs":["EC:5.4.4.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"methylthiopentylmalate isomerase activity","secondary_identifiers":["MetaCyc:RXNQT-4170"],"termid":"GO:0103086"}


id: GO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which infecting bacteria are clumped together by a host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of bacterial agglutination","termid":"GO:0043152"}


id: PBO:0074191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 1","termid":"PBO:0074191"}


id: FYPO:0004486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein deacetylation during vegetative growth","synonyms":[{"name":"abolished protein deacetylation during mitotic cell cycle","type":"related"},{"name":"protein deacetylation abolished during vegetative growth","type":"exact"},{"name":"protein deacetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004486"}


id: PBO:0091800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.183","termid":"PBO:0091800"}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_04785","SJAG_01868","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82930,87348,93345],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: PBO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide receptor 2","termid":"PBO:0061401"}


id: PBO:0028654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_snRNA_3'-end_processing","termid":"PBO:0028654"}


id: GO:0008558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: ATP + H2O + guanine(out) = ADP + phosphate + guanine(in).","definition_xrefs":["RHEA:20832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine transmembrane transporter activity","termid":"GO:0015208"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type guanine transporter activity","secondary_identifiers":["MetaCyc:3.6.3.37-RXN","EC:7.6.2.6"],"synonyms":[{"name":"ATP-dependent guanine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled guanine transmembrane transporter activity","type":"related"},{"name":"guanine ABC transporter","type":"exact"},{"name":"guanine-transporting ATPase activity","type":"related"}],"termid":"GO:0008558"}


id: PBO:0078398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 8-1","termid":"PBO:0078398"}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: PBO:0041591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A","termid":"PBO:0041591"}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_00486","SJAG_00405","SJAG_05309","SJAG_04271","SJAG_03746","SJAG_02248","SJAG_02529","SJAG_01483","SJAG_04010","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87841,92563,93255,95574,95575,98722,99963,102711,103618,109988],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0007049","GO:0030437","GO:0000226"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: PBO:0074332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 divergent transcript","termid":"PBO:0074332"}


id: GO:0102165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-hex-3-en-1-ol = (3Z)-hex-3-en-1-yl acetate + coenzyme A.","definition_xrefs":["GOC:pz","RHEA:28254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"(Z)-3-hexen-1-ol acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11852","EC:2.3.1.195"],"termid":"GO:0102165"}


id: GO:0102481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H2O = 5-deoxy-D-glucuronate + H+.","definition_xrefs":["EC:3.7.1.22","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase activity","secondary_identifiers":["RHEA:25836","MetaCyc:RXN-14149"],"termid":"GO:0102481"}


id: PBO:0058519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5707","termid":"PBO:0058519"}


id: GO:0072061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inner medullary collecting duct over time, from its formation to the mature structure. The inner medullary collecting duct is the portion of the collecting duct that lies in the renal inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner medullary collecting duct development","termid":"GO:0072061"}


id: GO:0038176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the SREBP signaling pathway in response to a decrease in oxygen levels.","definition_xrefs":["GOC:al","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of SREBP signaling pathway","termid":"GO:2000640"},{"relation_name":"part_of","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of SREBP signaling pathway in response to decreased oxygen levels","synonyms":[{"name":"positive regulation of SREBP-mediated signaling pathway in absence of oxygen","type":"related"},{"name":"positive regulation of SREBP-mediated signaling pathway in response to decreased oxygen levels","type":"exact"}],"termid":"GO:0038176"}


id: PBO:0038445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aralkylamine N-acetyltransferase","termid":"PBO:0038445"}


id: PBO:0062820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute carrier partner 1","termid":"PBO:0062820"}


id: PBO:0051782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing E","termid":"PBO:0051782"}


id: PBO:0111838
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain","termid":"PBO:0111838"}


id: GO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-D-aspartate receptor-associated protein activity (obsolete GO:0004973)","synonyms":[{"name":"N-methyl-D-aspartate receptor-associated protein activity","type":"exact"}],"termid":"GO:0004973"}


id: PBO:0042654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 3","termid":"PBO:0042654"}


id: GO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending thin limb development","termid":"GO:0072022"}


id: PBO:0082016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZW10 interacting kinetochore protein","termid":"PBO:0082016"}


id: PBO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Cut12","termid":"PBO:0003238"}


id: PBO:0079966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 4","termid":"PBO:0079966"}


id: FYPO:0005183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, does not occur when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein polyubiquitination during vegetative growth","termid":"FYPO:0005928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein polyubiquitination during cellular response to UV","synonyms":[{"name":"abolished protein polyubiquitination during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"abolished protein polyubiquitination during cellular response to UV during vegetative growth","type":"exact"},{"name":"abolished protein polyubiquitination during cellular response to ultraviolet light","type":"exact"},{"name":"abolished protein polyubiquitinylation during cellular response to UV","type":"related"},{"name":"abolished protein polyubiquitylation during cellular response to UV","type":"exact"},{"name":"protein polyubiquitination abolished during cellular response to UV","type":"exact"}],"termid":"FYPO:0005183"}


id: PBO:0091172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex Dpy-30 domain subunit Sdc1","termid":"PBO:0091172"}


id: GO:0062037
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95109],"is_not":false,"summary":null,"term":"GO:0062037"}]},"cv_name":"molecular_function","definition":"Binding to a DNA D-loop. A D-loop is a three-stranded DNA structure formed by the invasion of a single DNA strand that base pairs with one strand of duplex DNA, while the rest of the double-stranded DNA does not unwind.","definition_xrefs":["PMID:20924116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"D-loop DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA displacement loop binding","type":"exact"}],"termid":"GO:0062037","terms_by_termid":{"GO:0062037":null}}


id: PBO:0041987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 30","termid":"PBO:0041987"}


id: PBO:0048791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2 pseudogene 2","termid":"PBO:0048791"}


id: GO:1905273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GOC:TermGenie","PMID:21106936","GOC:als","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of proton-transporting ATP synthase activity, rotational mechanism","termid":"GO:1905271"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"activation of H+-transporting ATP synthase activity","type":"narrow"},{"name":"activation of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"activation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"activation of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"activation of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"positive regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"positive regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"positive regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"upregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"upregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"upregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"GO:1905273"}


id: PBO:0049644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 47","termid":"PBO:0049644"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:12526776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: PBO:0030136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_S_phase","termid":"PBO:0030136"}


id: PBO:0080174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 9","termid":"PBO:0080174"}


id: PBO:0036293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in Mitotic Arrest","termid":"PBO:0036293"}


id: GO:0032298
data:
  {"annotated_genes":["SJAG_02074","SJAG_03695","SJAG_03438","SJAG_00364","SJAG_03160","SJAG_03720","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99136,108013,113359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[84553,98164,102495,112321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"DNA replication initiation","termid":"GO:0006270"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation","type":"narrow"},{"name":"negative regulation of DNA replication initiation","type":"broad"},{"name":"positive regulation of DNA-dependent DNA replication initiation","type":"exact"},{"name":"stimulation of DNA replication initiation","type":"narrow"},{"name":"up regulation of DNA replication initiation","type":"exact"},{"name":"up-regulation of DNA replication initiation","type":"exact"},{"name":"upregulation of DNA replication initiation","type":"exact"}],"termid":"GO:0032298","terms_by_termid":{"GO:1903468":null,"GO:1904514":null}}


id: GO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of linking a protein to peptidoglycan via a carboxy terminal threonine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-protein cross-linking","termid":"GO:0018104"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein","termid":"GO:0042902"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: GO:0033824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from sucrose to alternately the 6-position and the 3-position of the non-reducing terminal residue of an alpha-D-glucan, thus producing a glucan having alternating alpha-1,6- and alpha-1,3-linkages.","definition_xrefs":["EC:2.4.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alternansucrase activity","secondary_identifiers":["MetaCyc:2.4.1.140-RXN"],"synonyms":[{"name":"sucrose-1,6(3)-alpha-glucan 6(3)-alpha-glucosyltransferase activity","type":"related"},{"name":"sucrose:1,6(1,3)-alpha-D-glucan 6(3)-alpha-D-glucosyltransferase activity","type":"related"},{"name":"sucrose:1,6-, 1,3-alpha-D-glucan 3-alpha- and 6-alpha-D-glucosyltransferase activity","type":"broad"}],"termid":"GO:0033824"}


id: PBO:0051798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing N","termid":"PBO:0051798"}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["RHEA:35031","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: PR:O42944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh2 gene.","definition_xrefs":["UniProtKB:O42944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.09c","synonyms":[{"name":"Spom972h-omh2","type":"exact"}],"termid":"PR:O42944"}


id: GO:0007440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foregut morphogenesis","termid":"GO:0007440"}


id: PBO:0069001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 245, pseudogene","termid":"PBO:0069001"}


