# terms

id: PBO:0028975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nitrite","termid":"PBO:0028975"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: PBO:0079050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 6-1","termid":"PBO:0079050"}


id: PBO:0084700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glycerol-3-phosphate dehydrogenase; expression is repressed by both glucose and cAMP and derepressed by non-fermentable carbon sources in a Snf1p, Rsf1p, Hap2/3/4/5 complex dependent manner","termid":"PBO:0084700"}


id: GO:0045048
data:
  {"annotated_genes":["SJAG_05414","SJAG_02437","SJAG_00064","SJAG_01782","SJAG_02065","SJAG_01178","SJAG_02330","SJAG_00277","SJAG_03865","SJAG_02914","SJAG_00959","SJAG_01999","SJAG_03315","SJAG_01223","SJAG_01127","SJAG_03930","SJAG_02208","SJAG_00603","SJAG_04684","SJAG_04294","SJAG_01940","SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86769,87191,90478,93766,94085,94324,96968,99339,100321,100624,102038,104221,104310,105265,106340,108232,109891,110443,111155],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[83412,106949,110178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in incorporation of a protein into an endoplasmic reticulum (ER) membrane. It depends on specific topogenic sequences of amino acids that ensure that a protein acquires the proper orientation during its insertion into the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01782":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral ER membrane protein localization","type":"exact"},{"name":"integral ER membrane protein positioning","type":"exact"},{"name":"localization of protein in ER membrane","type":"exact"},{"name":"positioning of protein in ER membrane","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"protein-ER insertion","type":"exact"},{"name":"protein-endoplasmic reticulum insertion","type":"exact"}],"termid":"GO:0045048","terms_by_termid":{"GO:0045048":null,"GO:0071816":null}}


id: PBO:0039448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and LEM domain containing 1","termid":"PBO:0039448"}


id: PBO:0069716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 996, pseudogene","termid":"PBO:0069716"}


id: PBO:0059782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 8","termid":"PBO:0059782"}


id: GO:1905650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shell calcification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"positively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shell calcification","synonyms":[{"name":"activation of shell calcification","type":"narrow"},{"name":"up regulation of shell calcification","type":"exact"},{"name":"up-regulation of shell calcification","type":"exact"},{"name":"upregulation of shell calcification","type":"exact"}],"termid":"GO:1905650"}


id: GO:0007389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:go_curators","ISBN:0521436125","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification process","synonyms":[{"name":"pattern biosynthesis","type":"related"},{"name":"pattern formation","type":"related"}],"termid":"GO:0007389"}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: PBO:0063627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 3","termid":"PBO:0063627"}


id: PBO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rhp57 delta single mutant was suppressed in the swi5delta rhp57delta double mutant, to a level similar to that observed in the rhp51 mutant","termid":"PBO:0001351"}


id: PBO:0038553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 8","termid":"PBO:0038553"}


id: GO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin, etc.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle","termid":"GO:0042303"}


id: FYPO:0001513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["GO:0000070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic sister chromatid segregation","synonyms":[{"name":"normal mitotic chromosome segregation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"exact"},{"name":"normal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"normal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001513"}


id: PATO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000795 healing value (obsolete PATO:0000795)","termid":"PATO:0000795"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: PBO:0055106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2524","termid":"PBO:0055106"}


id: GO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:dph","GOC:lm","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of injured axon","termid":"GO:0048674"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: PBO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx3, Cdc48 cofactor","termid":"PBO:0001095"}


id: GO:0090535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.","definition_xrefs":["PMID:16568949","PMID:21810179","PMID:15284901","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"WICH complex","termid":"GO:0090535"}


id: PBO:0064384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 6","termid":"PBO:0064384"}


id: PBO:0059752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 26","termid":"PBO:0059752"}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: PBO:0005407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Rhp26","termid":"PBO:0005407"}


id: PBO:0030635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import_during_nitrogen_starvation","termid":"PBO:0030635"}


id: GO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the timing and/or rate at which a relatively unspecialized cell in the subpallium acquires features of a neuron. The subpallium is the base region of the telencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of timing of neuron differentiation","termid":"GO:0060164"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of subpallium neuron differentiation","termid":"GO:0060165"}


id: PBO:0061622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 6","termid":"PBO:0061622"}


id: PBO:0077356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97","termid":"PBO:0077356"}


id: GO:0098987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the modification of synaptic structure and as a result regulates synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of modification of synaptic structure","termid":"GO:1905244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of modification of synapse structure, modulating synaptic transmission","termid":"GO:0098987"}


id: PBO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 19","termid":"PBO:0042756"}


id: PBO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-22 (pseudogene)","termid":"PBO:0051295"}


id: PBO:0062689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 10 pseudogene","termid":"PBO:0062689"}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10","ISBN:0721662544","ISBN:0124020607","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: FYPO:0005266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium dodecyl sulfate (SDS) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium dodecyl sulphate","type":"exact"},{"name":"resistant to SDS","type":"exact"},{"name":"resistant to sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0005266"}


id: PBO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ serine hydrolase family fusion protein Dfr1","termid":"PBO:0013479"}


id: GO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament organization","synonyms":[{"name":"regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"regulation of myosin II filament organisation","type":"exact"}],"termid":"GO:0043519"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: SO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for pseudouridylation_guide_snoRNA. A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA_gene","termid":"SO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA_gene","synonyms":[{"name":"pseudouridylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002380"}


id: FYPO:0005426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, is curved along the long axis to form a \\\"C\\\" shape, and contains cytoplasmic microtubules that are longer than normal and curved. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a C-shaped cell, the curve is centered at the midpoint of the long axis of the cell. Microtubules curve around the ends of the cell and may become long enough to form loops.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:11739790"],"direct_ancestors":[{"relation_name":"has_part","term_name":"C-shaped vegetative cell","termid":"FYPO:0005789"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell with long curved interphase microtubules","termid":"FYPO:0005425"},{"relation_name":"is_a","term_name":"C-shaped vegetative cell","termid":"FYPO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0000005","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"elongated C-shaped vegetative cell with long curved interphase microtubules","synonyms":[{"name":"curved elongated C-shaped vegetative cell with long curved interphase microtubules","type":"exact"},{"name":"elongated C-shaped cell with elongated curved interphase microtubules","type":"exact"},{"name":"elongated C-shaped cell with long curved interphase microtubules during vegetative growth","type":"exact"},{"name":"elongated C-shaped vegetative cell with long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"elongated C-shaped vegetative cell with long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"elongated C-shaped vegetative cell with long curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005426"}


id: PR:O60093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ber1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.13","synonyms":[{"name":"Spom972h-ber1","type":"exact"}],"termid":"PR:O60093"}


id: PBO:0083624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to regulate K63 polyubiquitination in response to oxidative stress and to monoubiquinate histone H2B-K123, which is required for the subsequent methylation of histone H3-K4 and H3-K79; required for DSBR, transcription, silencing, and checkpoint control; interacts with RNA-binding protein Npl3p, linking histone ubiquitination to mRNA processing; Bre1p-dependent histone ubiquitination promotes pre-mRNA splicing","termid":"PBO:0083624"}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: PBO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 22","termid":"PBO:0072052"}


id: GO:2001256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of store-operated calcium entry","synonyms":[{"name":"regulation of SOCE","type":"exact"},{"name":"regulation of calcium ion import","type":"related"},{"name":"regulation of capacitative calcium entry","type":"exact"},{"name":"regulation of store-operated calcium import","type":"exact"}],"termid":"GO:2001256"}


id: PBO:0067893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 195","termid":"PBO:0067893"}


id: GO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a triglyceride-rich lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}


id: GO:1905218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22309505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to astaxanthin","termid":"GO:1905217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to astaxanthin","synonyms":[{"name":"cellular response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905218"}


id: PR:Q10422
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25G10.01 gene.","definition_xrefs":["UniProtKB:Q10422","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C25G10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.01","synonyms":[{"name":"Spom972h-SPAC25G10.01","type":"exact"}],"termid":"PR:Q10422"}


id: PBO:0045991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 5","termid":"PBO:0045991"}


id: PBO:0061836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor","termid":"PBO:0061836"}


id: GO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene-cis-4,5-dihydrodiol = 4,5-dihydroxybenzo(a)pyrene + H2.","definition_xrefs":["UM-BBD_reactionID:r1127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene-cis-4,5-dihydrodiol dehydrogenase activity","termid":"GO:0034809"}


id: PBO:0029111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_phase","termid":"PBO:0029111"}


id: PBO:0057629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1204","termid":"PBO:0057629"}


id: GO:0007613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task).","definition_xrefs":["GOC:curators","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory","secondary_identifiers":["Wikipedia:Memory"],"termid":"GO:0007613"}


id: PR:Q9P7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC694.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7T7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.03","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN-specific adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC694.03","type":"exact"},{"name":"protein POF1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7T7"}


id: PBO:0017519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba3","termid":"PBO:0017519"}


id: PBO:0031731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis","termid":"PBO:0031731"}


id: SO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000660 DNA_invertase_target_sequence (obsolete SO:0000660)","termid":"SO:0000660"}


id: GO:0035551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the initiating methionine or formylmethionine residue from a protein that contributes to protein maturation, the attainment of the full functional capacity of a protein.","definition_xrefs":["GOC:bf","GOC:hjd","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete protein initiator methionine removal involved in protein maturation (obsolete GO:0035551)","termid":"GO:0035551"}


id: GO:0015105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenite transmembrane transporter activity","termid":"GO:0015105"}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: GO:0044011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms of the same species attach to and grow on an inanimate surface such as a rock or pipe, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}


id: PBO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin family protein Vps1","termid":"PBO:0001278"}


id: PBO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2419","termid":"PBO:0055004"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: PBO:0005025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase Atp23 (predicted)","termid":"PBO:0005025"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: FYPO:0004736
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actomyosin contractile ring","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","rga4delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"abnormal contractile ring","type":"exact"},{"name":"abnormal cytokinetic contractile ring","type":"exact"},{"name":"abnormal mitotic contractile ring","type":"exact"}],"termid":"FYPO:0004736","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0030208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell","termid":"PBO:0030208"}


id: PBO:0064368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2","termid":"PBO:0064368"}


id: MOD:01265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#P","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site P","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01265"}


id: GO:0008320
data:
  {"annotated_genes":["SJAG_03560","SJAG_00959","SJAG_03415","SJAG_00373","SJAG_01597","SJAG_02077","SJAG_03358","SJAG_02398","SJAG_04218","SJAG_04996","SJAG_01640","SJAG_00175","SJAG_05259","SJAG_02330","SJAG_03515","SJAG_02208","SJAG_01879","SJAG_03502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93768,95173,102040,102045,103181,105267,105564,109222,111293],"is_not":false,"summary":null,"term":"GO:0008320"},{"annotations":[86427,96073,101027,92579,107771,103466,95276,99099,103488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a protein from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02398":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0140318","GO:0003674"],"is_obsolete":false,"name":"protein transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015463","Reactome:R-HSA-5250884","Reactome:R-HSA-1299475","Reactome:R-HSA-3149434","Reactome:R-HSA-5250972","Reactome:R-HSA-9636375","Reactome:R-HSA-5205661","Reactome:R-HSA-5229111","Reactome:R-HSA-5244404","Reactome:R-HSA-5244506","GO:0015266","Reactome:R-HSA-5228406","Reactome:R-HSA-9698930","Reactome:R-HSA-5210947","Reactome:R-HSA-184269","Reactome:R-HSA-5336420","Reactome:R-HSA-5250616","Reactome:R-HSA-5244428","Reactome:R-HSA-5246514","Reactome:R-HSA-9698933","Reactome:R-HSA-1268022","Reactome:R-HSA-5210943"],"synonyms":[{"name":"protein channel activity","type":"related"}],"termid":"GO:0008320","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: GO:1901416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to ethanol","termid":"GO:1901416"}


id: FYPO:0006786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing manganese ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on manganese","synonyms":[{"name":"normal cell population growth in presence of manganese","type":"exact"},{"name":"normal cell population growth on manganese","type":"exact"},{"name":"normal cell population growth on manganese ion","type":"exact"},{"name":"normal cellular response to manganese","type":"related"},{"name":"normal growth on manganese ions","type":"exact"},{"name":"normal vegetative cell population growth on manganese","type":"exact"}],"termid":"FYPO:0006786"}


id: FYPO:0003544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal during a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites during meiotic cell cycle","synonyms":[{"name":"accumulation of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"accumulation of double-strand break sites during meiotic cell cycle","type":"exact"},{"name":"increased number of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"increased number of double-strand break sites during meiosis","type":"related"},{"name":"increased number of meiotic double-strand break sites","type":"exact"},{"name":"increased number of meiotic double-strand breaks","type":"exact"}],"termid":"FYPO:0003544"}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: GO:0008950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete p-aminobenzoate synthetase (obsolete GO:0008950)","synonyms":[{"name":"p-aminobenzoate synthetase","type":"exact"}],"termid":"GO:0008950"}


id: PBO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 2","termid":"PBO:0061132"}


id: FYPO:0002854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate-cysteine ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutamate-cysteine ligase activity","synonyms":[{"name":"glutamate-cysteine ligase activity abolished","type":"exact"}],"termid":"FYPO:0002854"}


id: PBO:0067903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 205","termid":"PBO:0067903"}


id: PBO:0040524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antizyme inhibitor 1","termid":"PBO:0040524"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: FYPO:0005948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin regions where RNA polymerase II actively transcribes genes is decreased.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II highly transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005948"}


id: GO:0019451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process to pyruvate","termid":"GO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate, using cysteine dioxygenase","secondary_identifiers":["MetaCyc:CYSTEINE-DEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate, using cysteine dioxygenase","type":"exact"},{"name":"L-cysteine degradation to pyruvate, using cysteine dioxygenase","type":"exact"}],"termid":"GO:0019451"}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","ISBN:0878937420","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: GO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a host neurophysiological process, an organ system process carried out by any of the organs or tissues of neurological system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host nervous system process (obsolete GO:0044063)","synonyms":[{"name":"modulation by symbiont of host neurological system process","type":"exact"},{"name":"regulation by symbiont of host neurological system process","type":"exact"}],"termid":"GO:0044063"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: PBO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 62","termid":"PBO:0048351"}


id: PBO:0066023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP3 divergent transcript","termid":"PBO:0066023"}


id: GO:0160048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of fusing together the edges of a craniofacial suture.","definition_xrefs":["PMID:33842480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"craniofacial suture closure","termid":"GO:0160048"}


id: PBO:0016563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ASCC1 ortholog","termid":"PBO:0016563"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: MOD:01257
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12716131","PubMed:14997490","Unimod:194#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","termid":"MOD:00547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate - site K","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:01257"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: PBO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30A","termid":"PBO:0039510"}


id: PBO:0047289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast activation protein alpha","termid":"PBO:0047289"}


id: PR:Q9P6M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crp79 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor crp79 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.03c","synonyms":[{"name":"PABP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-crp79","type":"exact"},{"name":"meiotic expression up-regulated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"poly(A)-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polyadenylate-binding protein crp79 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M8"}


id: PBO:0012301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRV2","termid":"PBO:0012301"}


id: MOD:00700
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a tetrapyrrole group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapyrrole modified residue","synonyms":[{"name":"TetrapyrRes","type":"exact"}],"termid":"MOD:00700"}


id: PBO:0049656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 10, pseudogene","termid":"PBO:0049656"}


id: FYPO:0005295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which the occurrence of an RNA catabolic process is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA catabolic process during nitrogen starvation","synonyms":[{"name":"decreased RNA breakdown during nitrogen starvation","type":"exact"},{"name":"decreased RNA catabolic process during nitrogen deprivation","type":"exact"},{"name":"decreased RNA catabolism during nitrogen depletion","type":"exact"},{"name":"decreased RNA degradation during nitrogen starvation","type":"exact"},{"name":"reduced RNA catabolic process during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005295"}


id: PBO:0062818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 11","termid":"PBO:0062818"}


id: MOD:01162
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"fucosylated biantennary","synonyms":[{"name":"Fucosylated biantennary","type":"related"},{"name":"dHex(1)Hex(5)HexNAc(4)","type":"related"}],"termid":"MOD:01162"}


id: GO:1903141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GO_REF:0000058","PMID:24851274","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell development","termid":"GO:1901551"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"negatively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of endothelial barrier","synonyms":[{"name":"down regulation of establishment of endothelial barrier","type":"exact"},{"name":"down-regulation of establishment of endothelial barrier","type":"exact"},{"name":"downregulation of establishment of endothelial barrier","type":"exact"},{"name":"inhibition of establishment of endothelial barrier","type":"narrow"}],"termid":"GO:1903141"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: GO:0051537
data:
  {"annotated_genes":["SJAG_00601","SJAG_02016","SJAG_04098","SJAG_00532","SJAG_04397","SJAG_02474","SJAG_00217","SJAG_01841","SJAG_00822","SJAG_01417","SJAG_01935","SJAG_00455","SJAG_03862","SJAG_00244","SJAG_00260","SJAG_02495","SJAG_04016","SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83530,84306,86204,88562,88800,90710,96243,97393,100330,103302,105170,105798,109931,110153,110795,111113,112727,113944],"is_not":false,"summary":null,"term":"GO:0051537"}]},"cv_name":"molecular_function","definition":"Binding to a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","GOC:ai","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00822":null,"SJAG_01417":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04098":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2 iron, 2 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2 Fe 2 S cluster binding","type":"exact"},{"name":"2 iron, 2 sulphur cluster binding","type":"exact"},{"name":"2Fe-2S cluster binding","type":"exact"},{"name":"diiron disulfide cluster binding","type":"exact"},{"name":"diiron disulphide cluster binding","type":"exact"},{"name":"iron-sulfur cluster 2Fe-2S binding","type":"exact"},{"name":"iron-sulphur cluster 2Fe-2S binding","type":"exact"}],"termid":"GO:0051537","terms_by_termid":{"GO:0051537":null}}


id: GO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of oospore formation","termid":"GO:0075244"}


id: FYECO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerophosphocholine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerophosphocholine","secondary_identifiers":["PMID:38133430"],"termid":"FYECO:0000439"}


id: PBO:0028427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_fluoride","termid":"PBO:0028427"}


id: FYPO:0003497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003497"}


id: MOD:00891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-serine.","definition_xrefs":["PubMed:6893271","RESID:AA0195","ChEBI:29998","PubMed:7973665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser","type":"exact"},{"name":"D-serine","type":"exact"}],"termid":"MOD:00891"}


id: PBO:0055301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2728","termid":"PBO:0055301"}


id: PBO:0083910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone reductase; role in apoptosis-like cell death; may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions","termid":"PBO:0083910"}


id: PBO:0029526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_cell","termid":"PBO:0029526"}


id: PBO:0040270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM interactor","termid":"PBO:0040270"}


id: PBO:0039421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 1","termid":"PBO:0039421"}


id: FYPO:0005878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize tryptophan, and therefore requires tryptophan in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for tryptophan","synonyms":[{"name":"growth auxotrophic for tryptophan during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for tryptophan during vegetative growth","type":"exact"},{"name":"tryptophan auxotrophy","type":"exact"}],"termid":"FYPO:0005878"}


id: PBO:0066696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 2","termid":"PBO:0066696"}


id: PBO:0040537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 4","termid":"PBO:0040537"}


id: GO:0044518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor activity in another organism","termid":"GO:0044507"},{"relation_name":"is_a","term_name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044518"}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz","RHEA:36127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"gibberellin A34 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11384"],"termid":"GO:0102122"}


id: GO:1904064
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["PMID:15304482","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"positively_regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cation transmembrane transport","type":"narrow"},{"name":"up regulation of cation transmembrane transport","type":"exact"},{"name":"up-regulation of cation transmembrane transport","type":"exact"},{"name":"upregulation of cation transmembrane transport","type":"exact"}],"termid":"GO:1904064","terms_by_termid":{"GO:1905665":null}}


id: FYPO:0000710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to nitrogen starvation, which normally occurs in G1 phase, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"abnormal mitotic cell cycle arrest in response to nitrogen depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000710"}


id: GO:0006857
data:
  {"annotated_genes":["SJAG_02602","SJAG_00922","SJAG_01344","SJAG_01660","SJAG_05182","SJAG_05213","SJAG_01983","SJAG_03497","SJAG_02139","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[114429,114430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[91197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[114280,91751,92746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[63726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035672"},{"annotations":[92747,91752,114281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[103891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[98817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[59144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042939"}]},"cv_name":"biological_process","definition":"The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oligopeptide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006857","terms_by_termid":{"GO:0034775":null,"GO:0035442":null,"GO:0035672":null,"GO:0036246":null,"GO:0042939":null,"GO:0071996":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: GO:1902832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["PMID:21730158","GOC:mr","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"down regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"down-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"downregulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"inhibition of cell proliferation in dorsal spinal cord","type":"narrow"}],"termid":"GO:1902832"}


id: PBO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ5 antisense RNA 1","termid":"PBO:0052157"}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: PBO:0075908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13 Hsp70 interacting protein","termid":"PBO:0075908"}


id: PBO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Img2 (predicted)","termid":"PBO:0000477"}


id: PBO:0089707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-like ATPase, human OLA1 ortholog","termid":"PBO:0089707"}


id: PBO:0068348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 125","termid":"PBO:0068348"}


id: GO:0016624
data:
  {"annotated_genes":["SJAG_03290","SJAG_06382","SJAG_03064","SJAG_02006","SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106071,102614,82884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004591"},{"annotations":[104508,90661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_02464":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016624","terms_by_termid":{"GO:0004591":null,"GO:0004739":null}}


id: GO:0098586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to virus","termid":"GO:0098586"}


id: PBO:0059705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 13","termid":"PBO:0059705"}


id: GO:0051647
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613","SJAG_02509","SJAG_00140","SJAG_04387","SJAG_00397","SJAG_02431","SJAG_04597","SJAG_01370","SJAG_05185","SJAG_00113","SJAG_03264","SJAG_03835","SJAG_04001","SJAG_02040","SJAG_01863","SJAG_01662","SJAG_02561","SJAG_02045","SJAG_02286","SJAG_04003","SJAG_03673","SJAG_00368","SJAG_04143","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90869,87369,93284,86911,97208,106998,96490,113038,86521,98769,110004,99069,107363,107175,83219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[107177,102465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[108764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007097"},{"annotations":[103314,110006,113042,108111,105547,97221,99847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[94976,93361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[83223,86913,90872,93286,94977,84076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90044],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nucleus localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus localization","type":"exact"},{"name":"establishment and maintenance of nucleus localization","type":"exact"},{"name":"localization of nucleus","type":"exact"},{"name":"nucleus localisation","type":"exact"}],"termid":"GO:0051647","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null,"GO:1903563":null}}


id: PBO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein","termid":"PBO:0090703"}


id: PR:Q9P6M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug99 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 99 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.04","synonyms":[{"name":"Spom972h-mug99","type":"exact"}],"termid":"PR:Q9P6M7"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: PBO:0089084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm4","termid":"PBO:0089084"}


id: PR:Q10094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.15 gene.","definition_xrefs":["UniProtKB:Q10094","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.15","synonyms":[{"name":"Spom972h-SPAC11D3.15","type":"exact"}],"termid":"PR:Q10094"}


id: PBO:0064726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 62","termid":"PBO:0064726"}


id: GO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075207)","synonyms":[{"name":"negative regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075207"}


id: PBO:0004027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Trb1","termid":"PBO:0004027"}


id: PBO:0085815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps HMS2","termid":"PBO:0085815"}


id: PBO:0065779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 2","termid":"PBO:0065779"}


id: GO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a leg derived from an imaginal disc are generated and organized. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"leg disc morphogenesis","termid":"GO:0007478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}


id: MOD:02031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(4) HexNAc(5)","definition_xrefs":["Unimod:1519","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex1Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02031"}


id: MOD:00209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:3769923","PubMed:3181159","RESID:AA0204#SER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Ser)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Ser-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"},{"name":"XLNK-(D)SCys-VinAm","type":"exact"}],"termid":"MOD:00209"}


id: PBO:0066587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 2","termid":"PBO:0066587"}


id: SO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Description of sequence variants produced by alternative splicing, alternative promoter usage, alternative initiation and ribosomal frameshifting.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alternate_sequence_site","secondary_identifiers":["BS:00073","SO:0001065"],"synonyms":[{"name":"alternative_sequence","type":"exact"},{"name":"isoform","type":"narrow"},{"name":"sequence variation","type":"narrow"},{"name":"var_seq","type":"exact"},{"name":"varsplic","type":"narrow"}],"termid":"SO:0001149"}


id: PBO:0044196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin E","termid":"PBO:0044196"}


id: PR:O94694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.10 gene.","definition_xrefs":["UniProtKB:O94694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0620 protein C83.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.10","synonyms":[{"name":"Spom972h-SPBC83.10","type":"exact"}],"termid":"PR:O94694"}


id: PBO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine ligand 1","termid":"PBO:0044256"}


id: GO:1901656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glycoside transport","termid":"GO:1901656"}


id: PBO:0110869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class II), SHREC complex Clr3","termid":"PBO:0110869"}


id: PBO:0027208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_heterochromatin_during_meiosis","termid":"PBO:0027208"}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: PBO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)","termid":"PBO:0061920"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: PBO:0049608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 11","termid":"PBO:0049608"}


id: GO:0003718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase III.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription termination factor activity (obsolete GO:0003718)","synonyms":[{"name":"Pol III transcription termination factor activity","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"exact"}],"termid":"GO:0003718"}


id: PBO:0091253
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS2","termid":"PBO:0091253"}


id: PR:O14235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pof5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.02c","synonyms":[{"name":"Spom972h-pof5","type":"exact"}],"termid":"PR:O14235"}


id: PR:O94548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1322.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of telomere capping protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.09","synonyms":[{"name":"Spom972h-SPCC1322.09","type":"exact"}],"termid":"PR:O94548"}


id: GO:1900861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"}


id: PATO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of having complete, unaltered reproductive organs.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact male","termid":"PATO:0002366"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115584,115585,115676,115675,115677,115674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0062009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences.","definition_xrefs":["PMID:28784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary palate development","termid":"GO:0062009"}


id: PBO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AR member 1","termid":"PBO:0062223"}


id: RO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_taxon","termid":"RO:0002162"}


id: PBO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3","termid":"PBO:0001165"}


id: PBO:0011432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Sos7","termid":"PBO:0011432"}


id: PBO:0066237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 44","termid":"PBO:0066237"}


id: GO:0018744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene-1,2-epoxide + H2O = limonene-1,2-diol. Other substrates include alicyclic and 1-methyl-substituted epoxides, such as 1-methylcyclohexene oxide, indene oxide and cyclohexene oxide.","definition_xrefs":["EC:3.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"limonene-1,2-epoxide hydrolase activity","secondary_identifiers":["RHEA:10700","MetaCyc:3.3.2.8-RXN","UM-BBD_reactionID:r0734"],"synonyms":[{"name":"limonene oxide hydrolase activity","type":"related"}],"termid":"GO:0018744"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: PBO:0060923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 10","termid":"PBO:0060923"}


id: GO:1902213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["PMID:11773439","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"positively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prolactin signaling pathway","synonyms":[{"name":"activation of PRL signaling pathway","type":"narrow"},{"name":"activation of prolactin signaling pathway","type":"narrow"},{"name":"activation of prolactin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of PRL signaling pathway","type":"exact"},{"name":"positive regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up regulation of PRL signaling pathway","type":"exact"},{"name":"up regulation of prolactin signaling pathway","type":"exact"},{"name":"up regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of PRL signaling pathway","type":"exact"},{"name":"up-regulation of prolactin signaling pathway","type":"exact"},{"name":"up-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"upregulation of PRL signaling pathway","type":"exact"},{"name":"upregulation of prolactin signaling pathway","type":"exact"},{"name":"upregulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902213"}


id: FYPO:0006474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of translation in response to amino acid starvation","synonyms":[{"name":"abnormal regulation of translation during cellular response to amino acid starvation","type":"exact"},{"name":"abnormal regulation of translation in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to amino acid starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006474"}


id: FYPO:0002778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of sumoylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein sumoylation during vegetative growth","termid":"FYPO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein sumoylation during vegetative growth","synonyms":[{"name":"decreased protein sumolation during vegetative growth","type":"exact"},{"name":"decreased protein sumoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein sumoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002778"}


id: GO:1901626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of postsynaptic membrane organization","synonyms":[{"name":"regulation of post-synaptic membrane organization","type":"exact"},{"name":"regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901626"}


id: GO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:20951801","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"}


id: MOD:01218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15283597","Unimod:285#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site E","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01218"}


id: GO:0032775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to N-6 of adenine in a DNA molecule.","definition_xrefs":["GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on adenine (obsolete GO:0032775)","synonyms":[{"name":"adenine methylation","type":"related"}],"termid":"GO:0032775"}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: PBO:0017685
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat ERK2","termid":"PBO:0017685"}


id: PBO:0040775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 1","termid":"PBO:0040775"}


id: FYPO:0003093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which small RNA molecules physically associated with the Argonaute protein (Ago1) are longer than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased Argonaute-associated RNA length","synonyms":[{"name":"increased Argonaute-associated priRNA length","type":"narrow"},{"name":"increased Argonaute-associated siRNA length","type":"narrow"},{"name":"increased length of Ago1-associated RNA","type":"narrow"},{"name":"increased length of Argonaute-associated RNA","type":"exact"},{"name":"increased length of Argonaute-associated small RNA","type":"exact"}],"termid":"FYPO:0003093"}


id: GO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipase activity","termid":"GO:0060192"}


id: PBO:0060465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALF1 intronic transcript 1","termid":"PBO:0060465"}


id: PBO:0085123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085123"}


id: PR:O42888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aldo-keto reductase family 1 member E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C8E4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.04","secondary_identifiers":["UniProtKB:O42888"],"synonyms":[{"name":"Spom972h-Akr1e1","type":"exact"}],"termid":"PR:O42888"}


id: PBO:0084919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone of the endoplasmic reticulum lumen; involved in polypeptide translocation and folding; nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; regulated by the unfolded protein response pathway","termid":"PBO:0084919"}


id: PBO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKA divergent transcript","termid":"PBO:0043012"}


id: GO:0004415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4) linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.","definition_xrefs":["EC:3.2.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"hyalurononglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-2160892","Reactome:R-HSA-5693356","Reactome:R-HSA-9036077","MetaCyc:3.2.1.35-RXN","Reactome:R-HSA-1793209","Reactome:R-HSA-2160874","Reactome:R-HSA-2318585"],"synonyms":[{"name":"chondroitinase I activity","type":"related"},{"name":"chondroitinase activity","type":"broad"},{"name":"hyaluronate 4-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"hyaluronoglucosaminidase activity","type":"exact"},{"name":"hyaluronoglucosidase activity","type":"related"}],"termid":"GO:0004415"}


id: GO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the flower are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower morphogenesis","secondary_identifiers":["GO:0048411"],"termid":"GO:0048439"}


id: FYPO:0000825
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115225,115227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115228,115226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"increased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0002936","FYPO:0000910","FYPO:0001247"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation during vegetative growth","type":"related"},{"name":"RNA accumulation: increased during vegetative growth","type":"related"},{"name":"increased RNA accumulation during vegetative growth","type":"related"},{"name":"increased RNA level during mitotic cell cycle","type":"related"},{"name":"increased cellular RNA level during vegetative growth","type":"exact"},{"name":"increased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA accumulation during vegetative growth","type":"related"},{"name":"increased mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"increased messenger RNA level during vegetative growth","type":"narrow"},{"name":"increased transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0000825","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null}}


id: PBO:0017930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0017930"}


id: PBO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 1, pseudogene","termid":"PBO:0044410"}


id: GO:0050199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-piperoyl-CoA + piperidine = N-[(E,E)-piperoyl]piperidine + CoA + H+.","definition_xrefs":["RHEA:14561","EC:2.3.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"piperidine N-piperoyltransferase activity","secondary_identifiers":["MetaCyc:PIPERIDINE-N-PIPEROYLTRANSFERASE-RXN","KEGG_REACTION:R03994"],"synonyms":[{"name":"(E,E)-piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"},{"name":"piperidine piperoyltransferase activity","type":"related"},{"name":"piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"}],"termid":"GO:0050199"}


id: GO:0072659
data:
  {"annotated_genes":["SJAG_00068","SJAG_03453","SJAG_02177","SJAG_00137","SJAG_03029","SJAG_04158","SJAG_02231","SJAG_04434","SJAG_04930","SJAG_03970","SJAG_00330","SJAG_03810","SJAG_04565","SJAG_01809","SJAG_01516","SJAG_00030","SJAG_00858","SJAG_04923","SJAG_00144","SJAG_00430","SJAG_03756","SJAG_02912","SJAG_04609","SJAG_02392","SJAG_02338","SJAG_00916","SJAG_02583","SJAG_04597","SJAG_00379","SJAG_03838","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68119,84415,85024,86064,86377,94652,96622,97176,99709,111013,114551],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[96911,108781,109020,114587,114966,87833,103253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[102285,86690,109022,105515,104712,94443,103030,102925,90806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[83556],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[90039],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[91526],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903077"},{"annotations":[100489],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00068":null,"SJAG_00137":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00430":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02338":null,"SJAG_02392":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04923":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072661","GO:0090002"],"synonyms":[{"name":"protein localisation in plasma membrane","type":"related"},{"name":"protein localization in plasma membrane","type":"related"},{"name":"protein targeting to plasma membrane","type":"related"},{"name":"protein-plasma membrane targeting","type":"related"}],"termid":"GO:0072659","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0072659":null,"GO:0099638":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: PBO:0028482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_mononucleate_cell_with_elongated_germ_tube","termid":"PBO:0028482"}


id: GO:0009226
data:
  {"annotated_genes":["SJAG_02648","SJAG_00890","SJAG_03818","SJAG_01443","SJAG_02783","SJAG_00519","SJAG_03723","SJAG_00978","SJAG_01784","SJAG_02951","SJAG_02954","SJAG_03188","SJAG_02950","SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98889,84704,104299,112166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[109765,109776,109766,109758,105528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[98588,98484,57735,83660,84016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"nucleobase-containing compound biosynthetic process","termid":"GO:0034654"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleotide-sugar biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar anabolism","type":"exact"},{"name":"nucleotide-sugar biosynthesis","type":"exact"},{"name":"nucleotide-sugar formation","type":"exact"},{"name":"nucleotide-sugar synthesis","type":"exact"}],"termid":"GO:0009226","terms_by_termid":{"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0084213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition","termid":"PBO:0084213"}


id: GO:0052792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of xylogalacturonate by cleavage of the alpha-(1,4)-linkage. Xylogalacturonate (XGA) is composed of a chain of alpha-(1,4)-linked D-galacturonic acid residues with beta-D-xylose substituted at the O3 position.","definition_xrefs":["PMID:10618200","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"endo-xylogalacturonan hydrolase activity","synonyms":[{"name":"endo-galacturonase activity","type":"broad"}],"termid":"GO:0052792"}


id: GO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the shaping of the ureter. The ureter is a tube that extends from the kidney to the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in ureter morphogenesis (obsolete GO:0061149)","synonyms":[{"name":"BMP signalling pathway involved in ureter morphogenesis","type":"exact"}],"termid":"GO:0061149"}


id: PBO:0090826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase","termid":"PBO:0090826"}


id: PBO:0046332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX1 antisense RNA 2","termid":"PBO:0046332"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: GO:0022828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a solute by a channel that opens in response to phosphorylation of one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation-gated channel activity (obsolete GO:0022828)","termid":"GO:0022828"}


id: PBO:0035741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_neddylation_during_vegetative_growth","termid":"PBO:0035741"}


id: PBO:0036033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification_during_vegetative_growth","termid":"PBO:0036033"}


id: GO:0006422
data:
  {"annotated_genes":["SJAG_01197","SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110101],"is_not":false,"summary":null,"term":"GO:0006422"},{"annotations":[114139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01197":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006422","terms_by_termid":{"GO:0006422":null,"GO:0070146":null}}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: GO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in the lysosome that contains beta-galactosidase, cathepsin A, alpha-neuraminidase and N-acetylgalactosamine-6-sulfate sulfatase, and is involved in glycosaminoglycan catabolism.","definition_xrefs":["PMID:8910459","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0032991","GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal multienzyme complex","synonyms":[{"name":"GALNS-lysosomal hydrolase 1.27 MDa complex","type":"narrow"}],"termid":"GO:0070559"}


id: FYPO:0007387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) does not occur, and the cell grows only from the new end.","definition_xrefs":["PMID:12007420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished NETO","termid":"FYPO:0001018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0005568","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished NETO, with growth from new end","synonyms":[{"name":"NETO abolished, with growth from new end","type":"exact"},{"name":"abolished NETO during vegetative growth, with growth from new end","type":"exact"},{"name":"abolished NETO, with cell growth from new end","type":"exact"},{"name":"abolished NETO, with growth from new end during mitotic cell cycle","type":"related"},{"name":"abolished NETO, with growth from new end during vegetative growth","type":"exact"},{"name":"abolished NETO, with monopolar growth from new end","type":"exact"},{"name":"abolished cell growth mode switching, monopolar to bipolar, with growth from new end","type":"exact"},{"name":"abolished new end take-off, with growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with cell growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with growth from new end","type":"exact"}],"termid":"FYPO:0007387"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95827,100366],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["GOC:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: GO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing, in mammals, Derlin-1 and VCP-interacting membrane protein (VIMP). The complex links the p97/VCP-containing ATPase complex with Derlin-1 during translocation of protein substrates from the endoplasmic reticulum to the cytosol for degradation by the cytosolic proteasome.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:15215856","PMID:16186510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"Derlin-1-VIMP complex","synonyms":[{"name":"Derlin-1/VIMP complex","type":"exact"}],"termid":"GO:0036502"}


id: PBO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.20","termid":"PBO:0001558"}


id: GO:1901093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of protein homotetramerization","synonyms":[{"name":"regulation of protein homotetramer assembly","type":"exact"},{"name":"regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901093"}


id: PBO:0072848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 3","termid":"PBO:0072848"}


id: GO:0071170
data:
  {"annotated_genes":["SJAG_00073","SJAG_00998","SJAG_04855","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111083],"is_not":false,"summary":null,"term":"GO:0071170"},{"annotations":[98062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[87691,88966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at a specific termination site.","definition_xrefs":["GOC:mah","PMID:12009298","PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00998":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"site-specific DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071170","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071946":null}}


id: FYPO:0007179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during interphase of the mitotic cell cycle. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitotic interphase","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitotic interphase","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitotic interphase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007179"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["GOC:bc","PMID:20935643","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_00105","SJAG_00148","SJAG_00944","SJAG_02452","SJAG_00889","SJAG_01468","SJAG_00782","SJAG_04788","SJAG_00513","SJAG_02359","SJAG_01734","SJAG_04918","SJAG_03065","SJAG_02777","SJAG_02643","SJAG_04378","SJAG_00060","SJAG_04494","SJAG_01520","SJAG_02324","SJAG_04164","SJAG_03053","SJAG_04753","SJAG_04173","SJAG_04281","SJAG_03584","SJAG_05320","SJAG_02201","SJAG_01767","SJAG_00628","SJAG_00860","SJAG_02067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85379,85438,87621,89281,89818,90112,90130,91011,91598,92320,93697,93698,93935,98100,98881,99176,99768,99836,101899,102267,103846,103995,104252,104500,105285,106075,106320,106613,108342,111653,112091,114162],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: PATO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being egg-shaped and flat, with the narrow end attached to the base.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovate","termid":"PATO:0001891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obovate","synonyms":[{"name":"obovoid","type":"related"}],"termid":"PATO:0001936"}


id: PBO:0057321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-2","termid":"PBO:0057321"}


id: GO:1902236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:20160352","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"is_a","term_name":"negative regulation of response to endoplasmic reticulum stress","termid":"GO:1903573"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down-regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down-regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced apoptosis","type":"exact"},{"name":"downregulation of apoptosis in response to ER stress","type":"exact"},{"name":"downregulation of apoptosis triggered by ER stress","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced apoptosis","type":"narrow"},{"name":"inhibition of apoptosis in response to ER stress","type":"narrow"},{"name":"inhibition of apoptosis triggered by ER stress","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced apoptosis","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced apoptosis","type":"exact"},{"name":"negative regulation of apoptosis in response to ER stress","type":"exact"},{"name":"negative regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"negative regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902236"}


id: GO:0009893
data:
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id: PBO:0066527
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id: PBO:0047194
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id: PBO:0005290
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id: SO:0002065
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id: GO:0047489
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id: PBO:0045012
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id: PBO:0045855
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id: PBO:0111815
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id: PATO:0002349
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id: SO:0000757
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id: PBO:0066213
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id: GO:0031906
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id: PBO:0051785
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id: GO:0061977
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id: PBO:0081540
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id: PBO:0040907
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id: PR:Q9P6K8
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id: GO:1900532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of cell proliferation during cellular hyperosmotic response.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell proliferation involved in cellular hyperosmotic response (obsolete GO:1900532)","synonyms":[{"name":"down regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"down-regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"downregulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"inhibition of cell proliferation of cellular HOG response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hyperosmotic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hypertonic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular response to hypertonicity","type":"narrow"},{"name":"negative regulation of cell proliferation involved in cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular response to hypertonicity","type":"exact"}],"termid":"GO:1900532"}


id: GO:0033488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate 24,25-dihydrolanosterol.","definition_xrefs":["MetaCyc:PWY66-3","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cholesterol biosynthetic process via 24,25-dihydrolanosterol","synonyms":[{"name":"cholesterol anabolism via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol biosynthesis via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol formation via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol synthesis via 24,25-dihydrolanosterol","type":"exact"}],"termid":"GO:0033488"}


id: FYPO:0004388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pyrimidine salvage RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pyrimidine salvage RNAs are transcribed from genes whose products are involved in pyrimidine salvage.","definition_xrefs":["PomBase:mah","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased level of pyrimidine salvage gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pyrimidine salvage gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pyrimidine salvage gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pyrimidine salvage gene transcripts during vegetative growth","type":"exact"},{"name":"increased pyrimidine salvage gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004388"}


id: PBO:0031192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tunicamycin","termid":"PBO:0031192"}


id: PBO:0027101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_antisense_RNA_level","termid":"PBO:0027101"}


id: PBO:0089521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Fig4","termid":"PBO:0089521"}


id: GO:0099016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades and ends degradation of its DNA when free DNA ends are exposed. DNA ends are exposed during the life cycle of some viruses and these are targeted by host cells to destroy the virus. For example, some bacteriophages encode proteins that bind to free viral DNA ends, protecting them from degradation by host exonucleases.","definition_xrefs":["PMID:16949369","GOC:dos","PMID:11894948","VZ:3963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host innate immune recognition","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of DNA end degradation by host","synonyms":[{"name":"DNA end degradation evasion by virus","type":"exact"},{"name":"evasion by virus of DNA end degradation","type":"related"}],"termid":"GO:0099016"}


id: GO:1901861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:TermGenie","PMID:23150719","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle tissue development","termid":"GO:1901861"}


id: PBO:0056086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY86 antisense RNA 1","termid":"PBO:0056086"}


id: PBO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 2","termid":"PBO:0045688"}


id: GO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"}


id: PBO:0030838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenine_import","termid":"PBO:0030838"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113874],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739","GO:0032991"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: PBO:0065260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 1","termid":"PBO:0065260"}


id: PBO:0073660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3-HDAC complex associated factor","termid":"PBO:0073660"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109401],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: PBO:0089162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family minus-end directed microtubule motor Klp2","termid":"PBO:0089162"}


id: PBO:0078531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 24","termid":"PBO:0078531"}


id: GO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of glycosidic bonds through a beta-elimination reaction on alginate, a linear polysaccharide consisting of guluronate (G) and mannuronate (M) as the monomer constituents. An oligoalginate is a linear polymer of two, three or four units of (1->4)-alpha-L-guluronic acid and beta-D-mannuronic acid, releasing monosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["PMID:20925655","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"exo-oligoalginate lyase activity","secondary_identifiers":["EC:4.2.2.26"],"termid":"GO:0052764"}


id: FYPO:0005786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a shorter distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PomBase:mah","PMID:27729451","GO:0000729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of double-strand break processing","synonyms":[{"name":"decreased spatial extent of DSB processing","type":"exact"},{"name":"decreased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"decreased spatial extent of double-strand break resection","type":"exact"},{"name":"reduced spatial extent of double-strand break processing","type":"exact"}],"termid":"FYPO:0005786"}


id: GO:1905450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["PMID:18832707","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"negatively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"down regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"down regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"down regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"down regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"down regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"down-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"down-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"down-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"down-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"down-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"downregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"downregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"downregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"downregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"downregulation of IgG-mediated phagocytosis","type":"exact"},{"name":"inhibition of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"inhibition of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"inhibition of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"inhibition of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"inhibition of IgG-mediated phagocytosis","type":"narrow"},{"name":"negative regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"negative regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"negative regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"negative regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905450"}


id: PBO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 81","termid":"PBO:0052815"}


id: PBO:0038594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase long chain","termid":"PBO:0038594"}


id: FYPO:0000486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"delayed onset of meiotic recombination","synonyms":[{"name":"delayed meiotic recombination","type":"exact"},{"name":"meiotic recombination: delayed","type":"related"}],"termid":"FYPO:0000486"}


id: PBO:0090858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase-like protein","termid":"PBO:0090858"}


id: PBO:0110985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA nam1, byr2 repressing","termid":"PBO:0110985"}


id: GO:1905798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intraciliary anterograde transport.","definition_xrefs":["PMID:27930654","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intraciliary anterograde transport","termid":"GO:1905796"},{"relation_name":"positively_regulates","term_name":"intraciliary anterograde transport","termid":"GO:0035720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intraciliary anterograde transport","synonyms":[{"name":"activation of intraciliary anterograde transport","type":"narrow"},{"name":"activation of intraflagellar anterograde transport","type":"narrow"},{"name":"positive regulation of intraflagellar anterograde transport","type":"exact"},{"name":"up regulation of intraciliary anterograde transport","type":"exact"},{"name":"up regulation of intraflagellar anterograde transport","type":"exact"},{"name":"up-regulation of intraciliary anterograde transport","type":"exact"},{"name":"up-regulation of intraflagellar anterograde transport","type":"exact"},{"name":"upregulation of intraciliary anterograde transport","type":"exact"},{"name":"upregulation of intraflagellar anterograde transport","type":"exact"}],"termid":"GO:1905798"}


id: PBO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kappa","termid":"PBO:0044009"}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: GO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070758"}


id: FYPO:0004770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular glutamine level","termid":"FYPO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glutamine level","synonyms":[{"name":"increased level of glutamine in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamine level","type":"exact"},{"name":"increased vacuolar glutamine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004770"}


id: PBO:0072384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 10","termid":"PBO:0072384"}


id: GO:2000577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000577)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"regulation of minus-end-directed kinesin ATPase activity","type":"related"},{"name":"regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000577"}


id: PBO:0058490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5684","termid":"PBO:0058490"}


id: PBO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-BoX protein","termid":"PBO:0001044"}


id: RO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoparasite_of","synonyms":[{"name":"lives inside of","type":"related"}],"termid":"RO:0002634"}


id: PBO:0045231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C18","termid":"PBO:0045231"}


id: GO:0048646
data:
  {"annotated_genes":["SJAG_04859","SJAG_03746","SJAG_00486","SJAG_01993","SJAG_04010","SJAG_03453","SJAG_03688","SJAG_00821","SJAG_05309","SJAG_00514","SJAG_02864","SJAG_02379","SJAG_02712","SJAG_03483","SJAG_02248","SJAG_01483","SJAG_02989","SJAG_04853","SJAG_03557","SJAG_03915","SJAG_04922","SJAG_01794","SJAG_04236","SJAG_04615","SJAG_03250","SJAG_02529","SJAG_03625","SJAG_00993","SJAG_04901","SJAG_04781","SJAG_02169","SJAG_02700","SJAG_01531","SJAG_02241","SJAG_04140","SJAG_00826","SJAG_00971","SJAG_01017","SJAG_01894","SJAG_01769","SJAG_03013","SJAG_04483","SJAG_01321","SJAG_03090","SJAG_03587","SJAG_04238","SJAG_04080","SJAG_02736","SJAG_02320","SJAG_04275","SJAG_04470","SJAG_00114","SJAG_00663","SJAG_04271","SJAG_00974","SJAG_04184","SJAG_03536","SJAG_03057","SJAG_01943","SJAG_01662","SJAG_04868","SJAG_04509","SJAG_02718","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[109986,99962,92562,114623,107471,92630,92206,103617,100958,91037,96489,106053,108701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[90095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[83680,85763,87296,113868,110134],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105228],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[104991,113878,100005,113869],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[93295,106054,105229,100805,87024],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[106055,103270,109987,93254,91038,86811,95572,94557,95573,95641,101128,113023,115101,97493,114916,93296,114624],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[95574,92563,98722,99963,93255,102711,109988,103618,87841,95575],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[89651,107276],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[88069,83730,94635,110371,94009,94718],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[92903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031382"},{"annotations":[107152],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[98077],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86249],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[107326,85370,86374,89097,83359],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[87726],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[95576,95577,101881,112049,95857,90145],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03625":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure formation involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formation of an anatomical structure involved in morphogenesis","type":"exact"}],"termid":"GO:0048646","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0031382":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:1902917":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0091540
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetylation increases F-actin binding affinity","termid":"PBO:0091540"}


id: PBO:0031887
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RFC3","termid":"PBO:0031887"}


id: GO:1901764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphinothricin.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin metabolic process","synonyms":[{"name":"phosphinothricin metabolism","type":"exact"}],"termid":"GO:1901764"}


id: PBO:0067643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 817, pseudogene","termid":"PBO:0067643"}


id: PBO:0080780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked, pseudogene","termid":"PBO:0080780"}


id: PBO:0047393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 33","termid":"PBO:0047393"}


id: PBO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 3","termid":"PBO:0071926"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: GO:0043581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the mycelium over time, from its formation to the mature structure. A mycelium consists of a mass of branching, thread-like hyphae.","definition_xrefs":["GOC:jl","PMID:12832397","ISBN:1580085792"],"gene_count":0,"genotype_count":0,"name":"obsolete mycelium development (obsolete GO:0043581)","termid":"GO:0043581"}


id: PBO:0059728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 2","termid":"PBO:0059728"}


id: SO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 5' end, that causes elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["PMID:32020195","PMID:27984720","PMID:15864293","PMID:14732127","PMID:31216041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_five_prime_extension","synonyms":[{"name":"CDS Extension 5 prime","type":"exact"},{"name":"CDS Extension five prime","type":"exact"},{"name":"elongated CDS five prime","type":"exact"},{"name":"elongated_CDS_five_prime","type":"exact"}],"termid":"SO:0002228"}


id: PBO:0065620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase mitochondrial 1","termid":"PBO:0065620"}


id: PBO:0049607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 10","termid":"PBO:0049607"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: PBO:0084457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase in the N-linked glycosylation pathway; catalyzes two consecutive steps in N-linked glycosylation pathway; mutants exhibit temperature-sensitive growth and abnormal accumulation of lipid-linked oligosaccharide Man2GlcNAc2-PP-Dol; mutations of human ALG2 cause congenital myasthenic syndrome; human ALG2 complements temperature sensitivity and dolichol-linked oligosaccharide biosynthesis defect of alg2-1 mutant, but mutant form from a patient with CDG-Ii fails to complement","termid":"PBO:0084457"}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: PBO:0077928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 1","termid":"PBO:0077928"}


id: PBO:0059578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1","termid":"PBO:0059578"}


id: GO:0008272
data:
  {"annotated_genes":["SJAG_00671","SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[96099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[61585,106064,64383,65538,65539,112711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sulfate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006870"],"synonyms":[{"name":"sulphate transport","type":"exact"}],"termid":"GO:0008272","terms_by_termid":{"GO:1902358":null,"GO:1902434":null,"GO:1990557":null}}


id: GO:0047751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-5alpha-steroid + NADP+ = a 3-oxo-delta(4)-steroid + H+ + NADPH.","definition_xrefs":["RHEA:54384","EC:1.3.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-oxo-5-alpha-steroid 4-dehydrogenase activity","termid":"GO:0003865"},{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-oxo-5alpha-steroid 4-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:CHOLESTENONE-5-ALPHA-REDUCTASE-RXN","MetaCyc:RXN-711","EC:1.3.1.30","MetaCyc:PROGESTERONE-5-ALPHA-REDUCTASE-RXN","KEGG_REACTION:R02610","MetaCyc:RXN-4229"],"synonyms":[{"name":"3-oxosteroid 5alpha-reductase activity","type":"related"},{"name":"3-oxosteroid delta4-dehydrogenase","type":"broad"},{"name":"cholestenone 5-alpha-reductase activity","type":"narrow"},{"name":"cholestenone 5a-reductase activity","type":"narrow"},{"name":"cholestenone 5alpha-reductase activity","type":"narrow"},{"name":"progesterone 5-alpha-reductase activity","type":"narrow"},{"name":"steroid 5alpha-hydrogenase activity","type":"broad"},{"name":"steroid 5alpha-reductase","type":"broad"},{"name":"sterol 5-alpha reductase activity","type":"broad"},{"name":"testosterone 5alpha-reductase","type":"narrow"},{"name":"testosterone delta4-hydrogenase activity","type":"narrow"}],"termid":"GO:0047751"}


id: PBO:0065914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB guanine nucleotide exchange factor 1","termid":"PBO:0065914"}


id: PBO:0091523
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly labelled as lcb3","termid":"PBO:0091523"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0111741
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family","termid":"PBO:0111741"}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: PBO:0082726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ribosome Quality Control (RQC) complex;  RQC is a ribosome-bound complex required for degradation of polypeptides arising from stalled translation; recruits alanine- and threonine-charged tRNA to the A site and directs the elongation of nascent chains independently of mRNA or 40S subunits; monitors translation stress and signals this to Hsf1p","termid":"PBO:0082726"}


id: PBO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm3","termid":"PBO:0003299"}


id: PBO:0088114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartyl protease (proteinase A); required for posttranslational precursor maturation of vacuolar proteinases; important for protein turnover after oxidative damage; plays a protective role in acetic acid induced apoptosis; synthesized as a zymogen, self-activates","termid":"PBO:0088114"}


id: PBO:0074858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45B","termid":"PBO:0074858"}


id: PBO:0072680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUFY1 antisense RNA 1","termid":"PBO:0072680"}


id: GO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-11,12-epoxyeicosatrienoic acid.","definition_xrefs":["RHEA:51480","PMID:10681399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid 11,12-epoxygenase activity","synonyms":[{"name":"cytochrome P450 CYP2C38","type":"narrow"}],"termid":"GO:0008405"}


id: PBO:0034718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid particle hydrolase (predicted)","termid":"PBO:0034718"}


id: PBO:0067761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 61","termid":"PBO:0067761"}


id: GO:1901743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-deoxystreptamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine catabolic process","synonyms":[{"name":"2-deoxystreptamine breakdown","type":"exact"},{"name":"2-deoxystreptamine catabolism","type":"exact"},{"name":"2-deoxystreptamine degradation","type":"exact"}],"termid":"GO:1901743"}


id: GO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial depolarization","synonyms":[{"name":"activation of mitochondrial depolarization","type":"narrow"},{"name":"stimulation of mitochondrial depolarization","type":"narrow"},{"name":"up regulation of mitochondrial depolarization","type":"exact"},{"name":"up-regulation of mitochondrial depolarization","type":"exact"},{"name":"upregulation of mitochondrial depolarization","type":"exact"}],"termid":"GO:0051901"}


id: PBO:0029544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_long_cells_(obsolete_FYPO:0002178)","termid":"PBO:0029544"}


id: PBO:0088575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3245 nucleolar protein, conserved in fungi and plant family","termid":"PBO:0088575"}


id: PBO:0084583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL062W as originally annotated as an independent ORF, but as a result of sequence changes, it was merged with an adjacent ORF into a single reading frame, designated YCL063W","termid":"PBO:0084583"}


id: PBO:0084746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrially-encoded 50-kD subunit of Endo.SceI; dimeric site-specific endonuclease that introduces double-stranded breaks at a number of well-defined sites in mitochondrial DNA, inducing homologous recombination; has a 26-bp recognition sequence in ATP6","termid":"PBO:0084746"}


id: GO:0140114
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96587,109785],"is_not":false,"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a fluoride. These may include chemical modification or transport of fluoride away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to fluoride","termid":"GO:1902618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140114","terms_by_termid":{"GO:0140114":null}}


id: PBO:0087288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells","termid":"PBO:0087288"}


id: PBO:0057495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 613","termid":"PBO:0057495"}


id: PBO:0082166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylylsulfate kinase; required for sulfate assimilation and involved in methionine metabolism; human homolog PAPSS2 complements yeast null mutant","termid":"PBO:0082166"}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: PBO:0043450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 11","termid":"PBO:0043450"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: PR:O74866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A riboflavin kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22749:SF0","PRO:DNx","OMA:SCHPO04897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.16c","secondary_identifiers":["UniProtKB:O74866"],"synonyms":[{"name":"ATP:riboflavin 5'-phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Flavokinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RFK","type":"exact"},{"name":"flavin mononucleotide kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74866"}


id: PBO:0039954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 1","termid":"PBO:0039954"}


id: GO:0000824
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94529],"is_not":false,"summary":null,"term":"GO:0000824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol tetrakisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11856","Reactome:R-HSA-1855185"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 3-kinase activity","type":"exact"},{"name":"EC:2.7.1.151","type":"broad"},{"name":"IpmK","type":"broad"},{"name":"inositol 1,4,5,6-tetrakisphosphate 3-kinase activity","type":"exact"},{"name":"inositol polyphosphate multikinase activity","type":"broad"}],"termid":"GO:0000824","terms_by_termid":{"GO:0000824":null}}


id: PBO:0080363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 18 pseudogene","termid":"PBO:0080363"}


id: PBO:0090528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex RNA helicase Ski2","termid":"PBO:0090528"}


id: GO:0160067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SIN signaling complex associated with the new mitotic spindle pole body during anaphase and characterized by the presence activated (GTP bound) GTPase (Spg1 in fission yeast) to activate SIN signaling.","definition_xrefs":["PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SIN/MEN signaling complex","termid":"GO:0160065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"new spindle pole body SIN signaling complex","synonyms":[{"name":"new spindle pole body SIN signalling complex","type":"exact"}],"termid":"GO:0160067"}


id: FYPO:0005089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which RNA polymerase II carboxy-terminal domain kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"RNA polymerase II carboxy-terminal domain kinase activity abolished","type":"exact"}],"termid":"FYPO:0005089"}


id: FYPO:0003075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity","termid":"FYPO:0003075"}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: PR:O43092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oxa102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein oxa1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.03","synonyms":[{"name":"Sp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-oxa102","type":"exact"},{"name":"cytochrome oxidase biogenesis protein 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43092"}


id: PBO:0029624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029624"}


id: GO:1905540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-7 (IL-7) and that consists of, at a minimum, an interleukin, an alpha and a gamma chain as well as optional additional kinase subunits. The alpha chain binds IL-7 with high affinity and subsequently binds the cytokine receptor common gamma chain that forms part of multiple interleukin receptors.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:19141282","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-7 receptor complex","synonyms":[{"name":"IL-7 receptor complex","type":"exact"},{"name":"IL-7-receptor complex","type":"exact"},{"name":"IL7 receptor complex","type":"exact"},{"name":"IL7-receptor complex","type":"exact"}],"termid":"GO:1905540"}


id: PBO:0050651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 1","termid":"PBO:0050651"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: GO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor.","definition_xrefs":["EC:2.4.1.221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"peptide-O-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1912349","Reactome:R-HSA-5173192","MetaCyc:2.4.1.221-RXN"],"synonyms":[{"name":"GDP-L-fucose:polypeptide fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:polypeptide O-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose protein O-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:polypeptide fucosyltransferase activity","type":"related"}],"termid":"GO:0046922"}


id: GO:0140410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + HCO3-(out) = monoatomic cation(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoatomic cation:bicarbonate symporter activity","synonyms":[{"name":"monoatomic cation:hydrogencarbonate symporter activity","type":"exact"},{"name":"solute:bicarbonate symporter activity","type":"broad"}],"termid":"GO:0140410"}


id: PBO:0086491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide","termid":"PBO:0086491"}


id: FYPO:0002660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose 6-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level","synonyms":[{"name":"decreased cellular trehalose 6-phosphate accumulation","type":"related"},{"name":"decreased cellular trehalose-6P level","type":"exact"},{"name":"reduced cellular trehalose 6-phosphate level","type":"exact"}],"termid":"FYPO:0002660"}


id: FYPO:0003540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) in one or more specific regions of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased regional homologous chromosome pairing","synonyms":[{"name":"decreased localised homologous chromosome pairing","type":"exact"},{"name":"decreased regional homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased regional synapsis","type":"exact"},{"name":"reduced regional homologous chromosome pairing","type":"exact"},{"name":"regionally decreased homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003540"}


id: PBO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin","termid":"PBO:0043059"}


id: GO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular matrix glycoprotein (obsolete GO:0005207)","synonyms":[{"name":"extracellular matrix glycoprotein","type":"exact"}],"termid":"GO:0005207"}


id: PBO:0085500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein arginine N-methyltransferase; exhibits septin and Hsl1p-dependent localization to the bud neck in budded cells and periodic Hsl1p-dependent phosphorylation; required with Hsl1p, and Elm1p for the mother-bud neck recruitment, phosphorylation, and degradation of Swe1p; responsible for symmetric dimethylation of histone H4 on Arg3; relocalizes away from bud neck upon DNA replication stress; human homolog PRMT5 can complement yeast hsl7 mutant","termid":"PBO:0085500"}


id: PBO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (predicted)","termid":"PBO:0003679"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PR:O94403
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.11c gene.","definition_xrefs":["UniProtKB:O94403","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C126.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.11c","synonyms":[{"name":"Spom972h-SPCC126.11c","type":"exact"}],"termid":"PR:O94403"}


id: PBO:0091868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Stb3","termid":"PBO:0091868"}


id: PBO:0062348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 1 pseudogene","termid":"PBO:0062348"}


id: PBO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2B","termid":"PBO:0046864"}


id: PBO:0051301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-39","termid":"PBO:0051301"}


id: PBO:0089329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant","termid":"PBO:0089329"}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: PBO:0041844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAS1 domain containing 1","termid":"PBO:0041844"}


id: PBO:0077693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 1","termid":"PBO:0077693"}


id: FYPO:0002783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during cellular response to nitric oxide","synonyms":[{"name":"decreased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"decreased transcription during cellular response to nitric oxide stress","type":"related"},{"name":"reduced transcription during cellular response to nitric oxide","type":"exact"}],"termid":"FYPO:0002783"}


id: GO:1902267
data:
  {"annotated_genes":["SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102264],"is_not":false,"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902267","terms_by_termid":{"GO:1902267":null}}


id: PBO:0028571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleotide-excision_repair_during_vegetative_growth","termid":"PBO:0028571"}


id: GO:0051769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051772"],"synonyms":[{"name":"regulation of NO synthase biosynthesis","type":"exact"},{"name":"regulation of NO synthase biosynthetic process","type":"exact"},{"name":"regulation of NOS biosynthesis","type":"exact"},{"name":"regulation of NOS biosynthetic process","type":"exact"},{"name":"regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051769"}


id: GO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of testosterone into the circulatory system. Testosterone is an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.","definition_xrefs":["GOC:sl","PMID:12606499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"testosterone secretion","termid":"GO:0035936"}


id: PBO:0059006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC pseudogene 2","termid":"PBO:0059006"}


id: GO:1901178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving spheroidene.","definition_xrefs":["UniPathway:UPA00683","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"spheroidene metabolic process","synonyms":[{"name":"spheroidene metabolism","type":"exact"}],"termid":"GO:1901178"}


id: PBO:0039948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 1","termid":"PBO:0039948"}


id: PBO:0028476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mannose-specific_cell-cell_adhesion","termid":"PBO:0028476"}


id: PBO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 38","termid":"PBO:0050260"}


id: PATO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/adaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaxial to","termid":"PATO:0002047"}


id: GO:1903125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A peptidyl-threonine phosphorylation that results in negative regulation of thioredoxin peroxidase activity.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:21850687","GO_REF:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation","synonyms":[{"name":"negative regulation of TPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of TrxPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of thiol peroxidase activity by peptidyl-threonine phosphorylation","type":"exact"}],"termid":"GO:1903125"}


id: GO:1905328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a septum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000080","PMID:4562349","GOC:tb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant septum development","synonyms":[{"name":"dissepiment development","type":"broad"}],"termid":"GO:1905328"}


id: PBO:0041492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf42 antisense RNA 1","termid":"PBO:0041492"}


id: PR:P36615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase csk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.06c","synonyms":[{"name":"CAK-activating kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CAKAK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csk1","type":"exact"}],"termid":"PR:P36615"}


id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["GOC:bf","ISBN:0781718325","GOC:jl","UniProtKB-KW:KW-0945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host process","secondary_identifiers":["GO:0044792","VZ:886","GO:0044661"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: PBO:0083907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-linked sulfhydryl oxidase of the mitochondrial IMS; N-terminus is an intrinsically disordered domain that in the cytosol helps target Erv1p to mitochondria, and in the intermembrane space oxidizes Mia40p as part of a disulfide relay system that promotes intermembrane space retention of imported proteins; functional ortholog of human GFER (ALR); human GFER carrying N-terminal 21 amino acids of Erv1p functionally complements the lethality of the erv1 null mutation","termid":"PBO:0083907"}


id: GO:0140604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the coenzyme mycofactocin, a variably glycosylated small molecule electron pair carrier derived from the C-terminal valine-tyrosine dipeptide of the ribosomally translated precursor peptide MftA.","definition_xrefs":["PMID:21223593","PMID:31381312","PMID:33014324","PMID:27312813","PMID:30183269","PMID:30778644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mycofactocin biosynthetic process","termid":"GO:0140604"}


id: PBO:0066538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 4","termid":"PBO:0066538"}


id: GO:0047281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrophosphate + a 2,4-dioxotetrahydropyrimidine D-ribonucleotide = PRPP + a 2,4-dioxotetrahydropyrimidine.","definition_xrefs":["MetaCyc:2.4.2.20-RXN","EC:2.4.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"dioxotetrahydropyrimidine phosphoribosyltransferase activity","secondary_identifiers":["RHEA:10232"],"synonyms":[{"name":"2,4-dioxotetrahydropyrimidine-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine phosphoribosyl transferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine ribonucleotide pyrophosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide diphosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide pyrophosphorylase activity","type":"related"}],"termid":"GO:0047281"}


id: PBO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR26 family, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0001088"}


id: PBO:0062775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 3","termid":"PBO:0062775"}


id: PBO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunD proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052040"}


id: PBO:0038363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_ameliorated_by","termid":"PBO:0038363"}


id: GO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in cytokinesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid tube assembly involved in cytokinesis (obsolete GO:0060991)","synonyms":[{"name":"lipid tube assembly involved in cytokinesis","type":"exact"},{"name":"lipid tubulation involved in cytokinesis","type":"exact"}],"termid":"GO:0060991"}


id: GO:1900958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"positive regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900961"},{"relation_name":"positively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900958"}


id: GO:0140693
data:
  {"annotated_genes":["SJAG_03905","SJAG_02045","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86920,88109,98712,101427],"is_not":false,"summary":null,"term":"GO:0140693"}]},"cv_name":"molecular_function","definition":"Binding and bringing together two or more macromolecules in contact, permitting those molecules to organize as a molecular condensate.","definition_xrefs":["PMID:28225081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_03023":null,"SJAG_03905":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"molecular condensate scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phase separation nucleation activity","type":"exact"},{"name":"phase separation nucleator activity","type":"exact"}],"termid":"GO:0140693","terms_by_termid":{"GO:0140693":null}}


id: PBO:0064096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITX1 antisense RNA 1","termid":"PBO:0064096"}


id: PBO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein associated with respiratory chain (predicted)","termid":"PBO:0034813"}


id: GO:1902993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:rl","PMID:24499793","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"activation of APP catabolic process","type":"narrow"},{"name":"activation of APP catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of APP catabolic process","type":"exact"},{"name":"positive regulation of APP catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of APP catabolic process","type":"exact"},{"name":"up regulation of APP catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of APP catabolic process","type":"exact"},{"name":"up-regulation of APP catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of APP catabolic process","type":"exact"},{"name":"upregulation of APP catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902993"}


id: PBO:0067224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 293, pseudogene","termid":"PBO:0067224"}


id: PBO:0066183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 7","termid":"PBO:0066183"}


id: PBO:0064469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 3","termid":"PBO:0064469"}


id: PBO:0048229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 1","termid":"PBO:0048229"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: GO:0038101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a nodal protein in the extracellular region, and inhibiting nodal signaling by preventing nodal from binding to its cell surface receptor.","definition_xrefs":["GOC:signaling","PMID:14570583","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"part_of","term_name":"negative regulation of nodal signaling pathway","termid":"GO:1900108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of nodal from receptor via nodal binding","synonyms":[{"name":"binding to and sequestering nodal","type":"exact"},{"name":"extracellular regulation of nodal","type":"broad"},{"name":"nodal antagonist activity","type":"broad"}],"termid":"GO:0038101"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz","EC:2.3.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: GO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + n-hexane = (1-methylpentyl)succinate.","definition_xrefs":["UM-BBD_reactionID:r0920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(1-methylpentyl)succinate synthase activity","termid":"GO:0034579"}


id: PBO:0087875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; facilitates elongation through factors that modify RNAP II; role in peroxide resistance involving Rad2p; role in nonhomologous end-joining (NHEJ) of ds breaks in plasmid DNA, but not chromosomal DNA; role in the hyperosmotic stress response through polymerase recruitment at RNAP II and RNAP III genes; negatively regulates sporulation; protein abundance increases in response to DNA replication stress; functionally complemented by human SUB1 (PC4)","termid":"PBO:0087875"}


id: PBO:0056948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15b","termid":"PBO:0056948"}


id: PBO:0045371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH5 divergent transcript","termid":"PBO:0045371"}


id: PBO:0030587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_valine_level","termid":"PBO:0030587"}


id: PBO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 29","termid":"PBO:0060041"}


id: PBO:0059309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51","termid":"PBO:0059309"}


id: PATO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000676 relative temperature value (obsolete PATO:0000676)","termid":"PATO:0000676"}


id: PBO:0038560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 2","termid":"PBO:0038560"}


id: PBO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (predicted)","termid":"PBO:0002786"}


id: PBO:0077292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35A","termid":"PBO:0077292"}


id: FYPO:0001616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular valine level","synonyms":[{"name":"decreased cellular L-valine level","type":"exact"},{"name":"decreased cellular valine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular valine level during vegetative growth","type":"exact"},{"name":"decreased level of valine in cell","type":"exact"},{"name":"reduced cellular valine level","type":"exact"},{"name":"reduced level of valine in cell","type":"exact"}],"termid":"FYPO:0001616"}


id: PBO:0063865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF1 5'-to-3' DNA helicase","termid":"PBO:0063865"}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: PBO:0063654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 11","termid":"PBO:0063654"}


id: PBO:0003553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial signal sequence","termid":"PBO:0003553"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["PubMed:16565085","RESID:AA0557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: PBO:0056381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 11","termid":"PBO:0056381"}


id: PBO:0056252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL2 antisense RNA 1","termid":"PBO:0056252"}


id: PBO:0004268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transporter (predicted)","termid":"PBO:0004268"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: PBO:0091221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb4","termid":"PBO:0091221"}


id: PBO:0073460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A3, pseudogene","termid":"PBO:0073460"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["PMID:10219233","ISBN:0716731363","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0061024","GO:0008150","GO:0065003","GO:0016192"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: MOD:01424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a quinaldate, kynurenate, or xanthurenate group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinaldate modified residue","termid":"MOD:01424"}


id: PBO:0081605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF528 antisense RNA 1","termid":"PBO:0081605"}


id: PATO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that is currently realizing none of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation quality","termid":"PATO:0002353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive","termid":"PATO:0002355"}


id: PBO:0045252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light chain 4","termid":"PBO:0045252"}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: GO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The racemization of peptidyl-phenylalanine.","definition_xrefs":["RESID:AA0194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"peptidyl-phenylalanine racemization","secondary_identifiers":["GO:0018089","GO:0018371"],"termid":"GO:0019125"}


id: PR:Q10242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gluconokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.12","secondary_identifiers":["UniProtKB:Q10242"],"synonyms":[{"name":"Spom972h-IDNK","type":"exact"},{"name":"gluconate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10242"}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: GO:0006641
data:
  {"annotated_genes":["SJAG_03609","SJAG_04041","SJAG_04792","SJAG_02907","SJAG_02683","SJAG_01036","SJAG_02089","SJAG_02487","SJAG_03162","SJAG_02543","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85548,108039,86987,110237,99810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[89664,113666,87427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[110850,89299,85627,87428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triglyceride, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triacylglycerol metabolic process","type":"exact"},{"name":"triacylglycerol metabolism","type":"exact"},{"name":"triglyceride metabolism","type":"exact"}],"termid":"GO:0006641","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null}}


id: GO:0010955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"negative regulation of protein maturation","termid":"GO:1903318"},{"relation_name":"negatively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein processing","synonyms":[{"name":"negative regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010955"}


id: GO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft assembly","termid":"GO:0001765"},{"relation_name":"is_a","term_name":"plasma membrane raft organization","termid":"GO:0044857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft assembly","termid":"GO:0044854"}


id: MOD:01724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01724"}


id: PBO:0065210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog B","termid":"PBO:0065210"}


id: GO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 7-alpha-hydroxycholesterol = NADH + H+ + 7-alpha-hydroxycholest-4-en-3-one.","definition_xrefs":["EC:1.1.1.181","MetaCyc:1.1.1.181-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity","secondary_identifiers":["RHEA:11896"],"synonyms":[{"name":"3-beta-hydroxy-Delta(5)-C(27)-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase activity","type":"related"},{"name":"cholest-5-ene-3beta,7alpha-diol:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047016"}


id: PBO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M-phase specific E3 ubiquitin protein ligase","termid":"PBO:0048168"}


id: PBO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_chromatin_binding","termid":"PBO:0030710"}


id: GO:0061860
data:
  {"annotated_genes":["SJAG_01010","SJAG_00729","SJAG_00272","SJAG_04150","SJAG_02182","SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85079,89599,90940,102871,108260,108831],"is_not":false,"summary":null,"term":"GO:0061860"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their removal from the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:23499004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA clamp unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA clamp unloading activity","type":"exact"}],"termid":"GO:0061860","terms_by_termid":{"GO:0061860":null}}


id: PBO:0082176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in the secretory and endocytic pathways; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082176"}


id: PBO:0050716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 2","termid":"PBO:0050716"}


id: PBO:0034617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_UV-damage_excision_repair","termid":"PBO:0034617"}


id: PBO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroepithelial cell transforming 1","termid":"PBO:0060888"}


id: PBO:0048258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose-4-epimerase","termid":"PBO:0048258"}


id: PBO:0011437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, sensor for unfolded proteins in the ER Ire1","termid":"PBO:0011437"}


id: PBO:0083176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL07R","termid":"PBO:0083176"}


id: GO:0098751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone cell development","termid":"GO:0098751"}


id: FYPO:0000571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of shmoo formation","synonyms":[{"name":"decreased rate of conjugation tube formation","type":"exact"},{"name":"decreased rate of mating projection assembly","type":"exact"},{"name":"decreased rate of mating projection formation","type":"exact"},{"name":"decreased rate of shmoo assembly","type":"exact"},{"name":"reduced rate of shmoo formation","type":"exact"},{"name":"shmoo formation: decreased rate","type":"related"}],"termid":"FYPO:0000571"}


id: PBO:0040628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell scaffold protein with ankyrin repeats 1","termid":"PBO:0040628"}


id: PBO:0081164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger TRAF-type containing 1","termid":"PBO:0081164"}


id: PBO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRF4","termid":"PBO:0018221"}


id: PBO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport_during_vegetative_growth","termid":"PBO:0031614"}


id: FYPO:0006899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormally asymmetric, i.e. cells separate asymmetrically by usually detaching one side of the new ends before the other. Normally, separate symmetrically by detaching both sides of the new ends from each other simultaneously.","definition_xrefs":["PMID:31116668","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"asymmetric cell separation after cytokinesis","synonyms":[{"name":"asymmetric cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"asymmetric cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"asymmetric mitotic cytokinetic cell separation","type":"exact"},{"name":"asymmetric septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0006899"}


id: GO:1902386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycyrrhetinate biosynthetic process","synonyms":[{"name":"glycyrrhetinate anabolism","type":"exact"},{"name":"glycyrrhetinate biosynthesis","type":"exact"},{"name":"glycyrrhetinate formation","type":"exact"},{"name":"glycyrrhetinate synthesis","type":"exact"}],"termid":"GO:1902386"}


id: GO:0042297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process whose outcome is a relatively long-lasting behavioral change whereby an organism modifies innate vocalizations to imitate sounds produced by others.","definition_xrefs":["PMID:16418265","PMID:17035521","GOC:dos","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory behavior","termid":"GO:0031223"},{"relation_name":"is_a","term_name":"imitative learning","termid":"GO:0098596"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vocal learning","secondary_identifiers":["Wikipedia:Vocal_learning"],"termid":"GO:0042297"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PBO:0040363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b","termid":"PBO:0040363"}


id: PBO:0088235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase Spe1","termid":"PBO:0088235"}


id: GO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mammary gland mesenchymal cell. Mammary gland mesenchymal cells form a loosely connected network of cells that surround the mammary ducts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in mammary gland development","synonyms":[{"name":"mammary gland mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0060610"}


id: GO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the biotin carboxyl carrier protein, a subunit of acetyl-coenzyme A carboxylase.","definition_xrefs":["PMID:8102363","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biotin carboxyl carrier protein biosynthetic process","synonyms":[{"name":"BCCP biosynthesis","type":"exact"},{"name":"BCCP biosynthetic process","type":"exact"},{"name":"biotin carboxyl carrier protein anabolism","type":"exact"},{"name":"biotin carboxyl carrier protein biosynthesis","type":"exact"},{"name":"biotin carboxyl carrier protein formation","type":"exact"},{"name":"biotin carboxyl carrier protein synthesis","type":"exact"}],"termid":"GO:0042966"}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: GO:0062111
data:
  {"annotated_genes":["SJAG_00328","SJAG_01078","SJAG_01803","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85965,100153],"is_not":false,"summary":null,"term":"GO:0062111"},{"annotations":[89401,89400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[85964,100152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into the organelle.","definition_xrefs":["PMID:29529046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into organelle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062111","terms_by_termid":{"GO:0062111":null,"GO:0140209":null,"GO:1904257":null}}


id: PBO:0042832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesteryl ester transfer protein","termid":"PBO:0042832"}


id: FYPO:0002504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein palmitoylation","synonyms":[{"name":"protein palmitoylation abolished","type":"exact"},{"name":"protein palmitoylation absent","type":"exact"}],"termid":"FYPO:0002504"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["Wikipedia:Habituation","GOC:kmv","PMID:11390637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: PBO:0092013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine (ugu), mitochondrial","termid":"PBO:0092013"}


id: PBO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS2 antisense RNA 1","termid":"PBO:0075302"}


id: GO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication.","definition_xrefs":["ISBN:0815316194","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA duplex unwinding","termid":"GO:0032508"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA unwinding involved in DNA replication","synonyms":[{"name":"DNA unwinding during replication","type":"related"},{"name":"DNA unwinding factor","type":"related"}],"termid":"GO:0006268"}


id: FYPO:0007903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell lyses during mitotic interphase, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:19189958","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during mitotic interphase","synonyms":[{"name":"cell lysis during NETO","type":"narrow"},{"name":"vegetative cell lysis during interphase","type":"exact"}],"termid":"FYPO:0007903"}


id: GO:0099108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activation potassium ion channel activity via direct interaction with a potassium ion channel during G protein-coupled receptor signaling.","definition_xrefs":["PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activator activity","termid":"GO:0099104"},{"relation_name":"is_a","term_name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","termid":"GO:0099107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"potassium channel activator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099108"}


id: GO:1990392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric cell-cell fusion complex that serves as a scaffold for zippering up the extracellular domains, bringing the transmembrane segments into close proximity such that they can continue zippering within the two membranes into one. Two prefusion monomers cluster at the surface of adjacent cells. Parallel EFF-1 interactions occur across cells and a third monomer, which can come from either cell, adds on to make an intermediate, extended trimer.","definition_xrefs":["GOC:bhm","PMID:24725407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"EFF-1 complex","termid":"GO:1990392"}


id: GO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The surface of a migrating cell that is in contact with the substratum or cell layer.","definition_xrefs":["PMID:11598004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"ventral surface of cell","termid":"GO:0061835"}


id: GO:0034924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-3,4-phenanthrenedihydrodiol-4-carboxylate = 3,4-dihydroxyphenanthrene + H+ + 2 e- + CO2.","definition_xrefs":["UM-BBD_reactionID:r0940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-3,4-phenanthrenedihydrodiol-4-carboxylate dehydrogenase activity","termid":"GO:0034924"}


id: FYPO:0000254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which the observed occurrence of protein processing is increased.","definition_xrefs":["PomBase:mah","PMID:19520858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased protein processing during vegetative growth","synonyms":[{"name":"increased Sre1 cleavage","type":"narrow"},{"name":"increased protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000254"}


id: GO:0090305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid phosphodiester bond hydrolysis (obsolete GO:0090305)","synonyms":[{"name":"nucleic acid cleavage","type":"exact"}],"termid":"GO:0090305"}


id: GO:0021903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is divided into specific regions along the rostrocaudal axis.","definition_xrefs":["GOC:jid","PMID:11262869","GOC:dph","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostrocaudal neural tube patterning","synonyms":[{"name":"anterior-posterior neural tube patterning","type":"related"}],"termid":"GO:0021903"}


id: PBO:0081488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 384","termid":"PBO:0081488"}


id: PBO:0049731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1 pseudogene 2","termid":"PBO:0049731"}


id: PBO:0027532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonuclease_activity","termid":"PBO:0027532"}


id: PBO:0080269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 32 pseudogene","termid":"PBO:0080269"}


id: GO:0045331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme-M 7-mercaptoheptanoylthreonine-phosphate heterodisulfide + H2 = coenzyme-M + N-(7-mercaptoheptanoyl)threonine O3-phosphate.","definition_xrefs":["EC:1.12.99.2"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity (obsolete GO:0045331)","synonyms":[{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"exact"},{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulphide hydrogenase activity","type":"exact"},{"name":"heterodisulfide reductase activity","type":"exact"}],"termid":"GO:0045331"}


id: PBO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase like","termid":"PBO:0047664"}


id: GO:2000510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"positively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"}


id: FYPO:0005250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caesium ions. Cells stop growing (and may die) at a concentration of caesium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caesium","synonyms":[{"name":"hypersensitive to caesium","type":"exact"},{"name":"sensitive to caesium during mitotic cell cycle","type":"related"},{"name":"sensitive to caesium during vegetative growth","type":"exact"},{"name":"sensitive to caesium ions","type":"exact"},{"name":"sensitive to cesium","type":"exact"}],"termid":"FYPO:0005250"}


id: PBO:0054767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2179","termid":"PBO:0054767"}


id: GO:1900652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"regulation of demethylkotanin anabolism","type":"exact"},{"name":"regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"regulation of demethylkotanin formation","type":"exact"},{"name":"regulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900652"}


id: GO:0009724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an abscisic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abscisic acid stimulus","synonyms":[{"name":"perception of abscisic acid stimulus","type":"related"}],"termid":"GO:0009724"}


id: GO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"pteridine biosynthetic process","synonyms":[{"name":"pteridine anabolism","type":"exact"},{"name":"pteridine biosynthesis","type":"exact"},{"name":"pteridine formation","type":"exact"},{"name":"pteridine synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0006728"}


id: PBO:0074671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 57","termid":"PBO:0074671"}


id: PATO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A width which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"width","termid":"PATO:0000921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased width","synonyms":[{"name":"broad","type":"related"},{"name":"wide","type":"related"},{"name":"wide/broad","type":"related"}],"termid":"PATO:0000600"}


id: GO:1900281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:pr","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"positive regulation of T cell costimulation","termid":"GO:2000525"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"activation of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"positive regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"upregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900281"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: GO:1905457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27010503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"negatively_regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphoid progenitor cell differentiation","synonyms":[{"name":"down regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"down-regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"downregulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"inhibition of lymphoid progenitor cell differentiation","type":"narrow"}],"termid":"GO:1905457"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: PBO:0027898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_siRNA_level","termid":"PBO:0027898"}


id: SO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence that has been inserted and is being propagated by the clone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert","synonyms":[{"name":"clone insert","type":"exact"}],"termid":"SO:0000753"}


id: PR:000050538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-527 of the amino acid sequence represented by UniProtKB:Q9P7J8. Example: UniProtKB:Q9P7J8, Ser-527, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:12805221","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","termid":"PR:000036914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gad8/Phos(S527)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8/Phos:2","type":"exact"},{"name":"UniProtKB:Q9P7J8, Ser-527, MOD:00046","type":"narrow"},{"name":"gad8/Phos(S527)","type":"exact"}],"termid":"PR:000050538"}


id: PR:O74742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A folylpolyglutamate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11136:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.17","secondary_identifiers":["UniProtKB:O74742"],"synonyms":[{"name":"FPGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.17","type":"related"},{"name":"Spom972h-FPGS","type":"exact"},{"name":"folylpoly-gamma-glutamate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74742"}


id: FYPO:0002511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein palmitoylation during meiosis","synonyms":[{"name":"abolished protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"protein palmitoylation abolished during meiosis","type":"exact"},{"name":"protein palmitoylation absent during meiosis","type":"exact"}],"termid":"FYPO:0002511"}


id: PBO:0053006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 1 pseudogene 1","termid":"PBO:0053006"}


id: FYECO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which uracil was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited uracil","termid":"FYECO:0000316"}


id: PBO:0066818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 117","termid":"PBO:0066818"}


id: PBO:0089727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase Mpi1","termid":"PBO:0089727"}


id: PBO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC9 family (predicted)","termid":"PBO:0002261"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: PBO:0039219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1 pseudogene 1","termid":"PBO:0039219"}


id: PBO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type I","termid":"PBO:0003432"}


id: FYPO:0001351
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115636,115612,115605,115610],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115337,115336,115524,115531,115637,115530,115523,115344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115575,115591,115588,115579,115583,115576],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115454],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal in the vegetative growth phase of the life cycle. 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id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: PBO:0069644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 921, pseudogene","termid":"PBO:0069644"}


id: FYPO:0006396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which interphase microtubule organizing center (iMTOC) assembly is abnormal. iMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an interphase microtubule organizing center.","definition_xrefs":["GO:0031024","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal iMTOC assembly","synonyms":[{"name":"abnormal iMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal iMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal iMTOC formation","type":"exact"},{"name":"abnormal interphase microtubule organizing center assembly","type":"exact"},{"name":"abnormal interphase microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0006396"}


id: FYPO:0003809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing latrunculin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on latrunculin A","synonyms":[{"name":"normal cell population growth in presence of latrunculin A","type":"exact"},{"name":"normal cell population growth on latrunculin A","type":"exact"},{"name":"normal cellular response to latrunculin A","type":"related"},{"name":"normal growth on LAT-A","type":"exact"},{"name":"normal growth on LatA","type":"exact"},{"name":"normal vegetative cell population growth on latrunculin A","type":"exact"}],"termid":"FYPO:0003809"}


id: PBO:0077477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 199","termid":"PBO:0077477"}


id: FYPO:0003754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"multiple mitotic spindles","synonyms":[{"name":"additional mitotic spindles present during vegetative growth","type":"exact"},{"name":"extra mitotic spindles during vegetative growth","type":"exact"},{"name":"increased number of mitotic spindles","type":"exact"},{"name":"mitotic spindles present in greater numbers during vegetative growth","type":"exact"},{"name":"multiple spindles during mitosis","type":"exact"},{"name":"multiple spindles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003754"}


id: FYPO:0007857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle midzone is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division. The meiotic spindle midzone is the area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990385","GO:1903096","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle during meiosis I","termid":"FYPO:0007750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle midzone during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle midzone during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle midzone","type":"exact"},{"name":"normal protein localization to spindle midzone during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007857"}


id: GO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic development","termid":"GO:0045995"}


id: PBO:0067346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 443, pseudogene","termid":"PBO:0067346"}


id: PBO:0086148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear envelope fusion during karyogamy; pheromone-regulated; peripheral protein of the nuclear membrane; interacts with Kar5p at the spindle pole body","termid":"PBO:0086148"}


id: FYPO:0001560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular threonine level","secondary_identifiers":["FYPO:0001614"],"synonyms":[{"name":"decreased cellular L-threonine level","type":"exact"},{"name":"decreased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular threonine level during vegetative growth","type":"exact"},{"name":"decreased level of threonine in cell","type":"exact"},{"name":"decreased threonine accumulation","type":"related"},{"name":"reduced cellular threonine level","type":"exact"},{"name":"reduced level of threonine in cell","type":"exact"}],"termid":"FYPO:0001560"}


id: PBO:0061687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 155","termid":"PBO:0061687"}


id: PBO:0062152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 2 pseudogene","termid":"PBO:0062152"}


id: PBO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalase_activity","termid":"PBO:0030698"}


id: GO:0045831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of light-activated channel activity","termid":"GO:0016061"},{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of light-activated channel activity","synonyms":[{"name":"down regulation of light-activated channel activity","type":"exact"},{"name":"down-regulation of light-activated channel activity","type":"exact"},{"name":"downregulation of light-activated channel activity","type":"exact"},{"name":"inhibition of light-activated channel activity","type":"narrow"}],"termid":"GO:0045831"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: GO:0047330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + long chain polyphosphate = glucose-6-phosphate + long chain polyphosphate.","definition_xrefs":["EC:2.7.1.63","MetaCyc:2.7.1.63-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"polyphosphate-glucose phosphotransferase activity","secondary_identifiers":["RHEA:22036"],"synonyms":[{"name":"polyphosphate glucokinase activity","type":"related"},{"name":"polyphosphate-D-(+)-glucose-6-phosphotransferase activity","type":"related"},{"name":"polyphosphate-glucose 6-phosphotransferase activity","type":"related"},{"name":"polyphosphate:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0047330"}


id: PBO:0082438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; CLB4 has a paralog, CLB3, that arose from the whole genome duplication","termid":"PBO:0082438"}


id: GO:0045070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral genome replication","synonyms":[{"name":"activation of viral genome replication","type":"narrow"},{"name":"stimulation of viral genome replication","type":"narrow"},{"name":"up regulation of viral genome replication","type":"exact"},{"name":"up-regulation of viral genome replication","type":"exact"},{"name":"upregulation of viral genome replication","type":"exact"}],"termid":"GO:0045070"}


id: PBO:0028047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_astral_microtubules","termid":"PBO:0028047"}


id: PBO:0081422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF277 antisense RNA 1","termid":"PBO:0081422"}


id: GO:0005376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane copper transporter (obsolete GO:0005376)","synonyms":[{"name":"plasma membrane copper transporter","type":"exact"}],"termid":"GO:0005376"}


id: PBO:0030462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isochromosome_formation_with_preferential_breakage_in_the_imr_region","termid":"PBO:0030462"}


id: GO:1902327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA ligation","termid":"GO:1902291"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902327"}


id: PBO:0075871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 1","termid":"PBO:0075871"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:872891","PMID:21965528","PomBase:mah","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: GO:0141044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications following binucleate central cell fertilization. This involves DNA methylation at the silent allele. In the endosperm, maternal genomes are hypomethylated compared with the paternal genome.","definition_xrefs":["PMID:28118754","PMID:10580004","PMID:16527743","PMID:16469697","PMID:18700816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming in the zygotic pronuclei","termid":"GO:0044725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"epigenetic programming in the endosperm","synonyms":[{"name":"epigenetic reprogramming in the endosperm","type":"exact"}],"termid":"GO:0141044"}


id: GO:0015722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Enables the transfer of bile acid from one side of a hepatocyte plasma membrane into a bile canaliculus. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid and bile salt transport","termid":"GO:0015721"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"canalicular bile acid transport","termid":"GO:0015722"}


id: PBO:0045981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase","termid":"PBO:0045981"}


id: GO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of catalase activity.","definition_xrefs":["PMID:10656833","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catalase complex","termid":"GO:0062151"}


id: GO:0005759
data:
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id: PBO:0067867
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id: PBO:0070446
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id: GO:0050897
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id: PBO:0054552
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id: GO:0061355
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id: GO:1902662
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