# terms

id: PBO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 4","termid":"PBO:0046183"}


id: PBO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector c","termid":"PBO:0043163"}


id: PBO:0110352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4-CDC7 kinase regulatory subunit","termid":"PBO:0110352"}


id: PBO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor (predicted)","termid":"PBO:0003348"}


id: GO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"positively_regulates","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide catabolic process","synonyms":[{"name":"positive regulation of amide breakdown","type":"exact"},{"name":"positive regulation of amide catabolism","type":"exact"},{"name":"positive regulation of amide degradation","type":"related"},{"name":"positive regulation of cellular amide catabolic process","type":"exact"}],"termid":"GO:0034253"}


id: PR:P30655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.13c","secondary_identifiers":["UniProtKB:P30655"],"synonyms":[{"name":"proteasome component pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC4A8.13c","type":"related"},{"name":"Spom972h-PSMB5","type":"exact"},{"name":"macropain subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicatalytic endopeptidase complex subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30655"}


id: GO:0021990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["GOC:cls","PMID:15806586","GOC:jid","ISBN:0878932585","GO_REF:0000021","GOC:dgh","GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate formation","termid":"GO:0021990"}


id: PBO:0065880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30 divergent transcript","termid":"PBO:0065880"}


id: PBO:0046268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 7","termid":"PBO:0046268"}


id: GO:2000215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"negatively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proline metabolic process","synonyms":[{"name":"negative regulation of proline metabolism","type":"exact"}],"termid":"GO:2000215"}


id: GO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any chitobiose, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitobiose metabolic process","termid":"GO:0052780"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose catabolic process","termid":"GO:0052781"}


id: PR:O94534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp14 gene.","definition_xrefs":["UniProtKB:O94534","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.07","synonyms":[{"name":"Spom972h-alp14","type":"exact"},{"name":"altered polarity protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94534"}


id: PBO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18a","termid":"PBO:0036312"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0038713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 8","termid":"PBO:0038713"}


id: PBO:0064377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component","termid":"PBO:0064377"}


id: PBO:0042398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codanin 1","termid":"PBO:0042398"}


id: PATO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a shape that resembles a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinus","termid":"PATO:0002378"}


id: PBO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein complex assembly protein","termid":"PBO:0090337"}


id: FYPO:0000097
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115194,115257,115269,115534],"is_not":false,"summary":null,"term":"FYPO:0000097"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caffeine. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to caffeine during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","sty1delta","atf1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"hypersensitive to caffeine during vegetative growth","type":"exact"},{"name":"sensitive to caffeine during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000097","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000097":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PBO:0044057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin C","termid":"PBO:0044057"}


id: PBO:0052400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 1","termid":"PBO:0052400"}


id: PBO:0063014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2B","termid":"PBO:0063014"}


id: PBO:0055706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 1 like","termid":"PBO:0055706"}


id: PBO:0084091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors; involved in proliferation of the Golgi, intra-Golgi transport and ER-to-Golgi transport; found in the cytoplasm and on Golgi-associated coated vesicles","termid":"PBO:0084091"}


id: GO:0010624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation","termid":"GO:0010624"}


id: PBO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2 pseudogene 1","termid":"PBO:0051862"}


id: PBO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga8","termid":"PBO:0036239"}


id: PBO:0074659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 48B","termid":"PBO:0074659"}


id: PBO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus_during_salt_stress","termid":"PBO:0030225"}


id: GO:0140823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2B-serine (position 36) + ATP = histone H2B-phosphoserine (position 36) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 36 of histone H2B.","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2B kinase activity","termid":"GO:0140998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0016740","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"histone H2BS36 kinase activity","synonyms":[{"name":"histone H2B-S36 kinase activity","type":"exact"},{"name":"histone kinase activity (H2B-S36 specific)","type":"exact"}],"termid":"GO:0140823"}


id: PBO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 47","termid":"PBO:0070817"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PR:O94674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.06c gene.","definition_xrefs":["UniProtKB:O94674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFI1-like protein C776.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.06c","synonyms":[{"name":"Spom972h-SPBC776.06c","type":"exact"}],"termid":"PR:O94674"}


id: PBO:0064951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 2","termid":"PBO:0064951"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: PBO:0082512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the ER membrane GPI transamidase complex; involved in adding glycosylphosphatidylinositol (GPI) anchors to newly synthesized proteins; luminally-oriented type I integral membrane glycoprotein of the ER; human PIGK protein is a functional homolog","termid":"PBO:0082512"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: PBO:0036103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036103"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


id: PBO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1 (predicted)","termid":"PBO:0002866"}


id: GO:0032612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-1 production","secondary_identifiers":["GO:0050701","GO:0042222"],"synonyms":[{"name":"IL-1 production","type":"exact"},{"name":"interleukin-1 biosynthetic process","type":"narrow"},{"name":"interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032612"}


id: GO:0106056
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96709,112129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106056","terms_by_termid":{"GO:0106057":null}}


id: GO:1901583
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103826],"is_not":false,"summary":null,"term":"GO:1901583"}]},"cv_name":"biological_process","definition":"The directed movement of a tetrapeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"tetrapeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapeptide membrane transport","type":"exact"},{"name":"tetrapeptide transmembrane transport","type":"broad"}],"termid":"GO:1901583","terms_by_termid":{"GO:1901583":null}}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: PBO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type","termid":"PBO:0001569"}


id: PBO:0058090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4307","termid":"PBO:0058090"}


id: PR:G2TRK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.15","synonyms":[{"name":"Spom972h-new12","type":"exact"}],"termid":"PR:G2TRK8"}


id: PBO:0052866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-9","termid":"PBO:0052866"}


id: GO:0097279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Histamine release triggered by the binding of an antigen to an IgE immunoglobulin bound to the cell surface. An example is mast cell histamine degranulation as a result of exposure of mast cell-bound IgE to alder tree pollen.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion mediated by immunoglobulin","termid":"GO:0097280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"histamine secretion mediated by IgE immunoglobulin","synonyms":[{"name":"Ig-mediated histamine release","type":"broad"},{"name":"histamine secretion mediated by IgE antibody","type":"exact"}],"termid":"GO:0097279"}


id: PBO:0053766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1011","termid":"PBO:0053766"}


id: GO:0140217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"positively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of D-aspartate import across plasma membrane","termid":"GO:0140217"}


id: GO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procambium histogenesis","termid":"GO:0010067"}


id: PBO:0064987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 4","termid":"PBO:0064987"}


id: GO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte differentiation","synonyms":[{"name":"monocyte cell differentiation","type":"exact"}],"termid":"GO:0030224"}


id: PR:000027529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:O14216-1, Thr-60/Thr-74/Thr-99/Thr-154, MOD:00047|Ser-87, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/Phos(T60,T74,S87,T99,T154)","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 phosphorylated 1","type":"exact"},{"name":"Spom-SLD2/Phos:1","type":"exact"},{"name":"drc1/Phos(T60,T74,S87,T99,T154)","type":"exact"}],"termid":"PR:000027529"}


id: PBO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2 (predicted)","termid":"PBO:0004497"}


id: PBO:0071492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 33","termid":"PBO:0071492"}


id: GO:0043332
data:
  {"annotated_genes":["SJAG_05001","SJAG_04100","SJAG_04886","SJAG_03011","SJAG_01732","SJAG_01794","SJAG_00185","SJAG_04703","SJAG_04781","SJAG_03444","SJAG_03145","SJAG_02351","SJAG_05285","SJAG_00667","SJAG_01171","SJAG_00700","SJAG_00938","SJAG_04901","SJAG_01017","SJAG_03646","SJAG_04509","SJAG_04001","SJAG_02924","SJAG_04982","SJAG_01888","SJAG_02169","SJAG_03596","SJAG_03625","SJAG_02486","SJAG_03453","SJAG_00677","SJAG_01215","SJAG_03123","SJAG_04723","SJAG_04887","SJAG_03357","SJAG_01993","SJAG_02718","SJAG_00514","SJAG_02228","SJAG_00279","SJAG_02222","SJAG_02700","SJAG_01943","SJAG_00870"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83319,84551,85323,86149,86192,87828,88022,88091,89049,90388,90901,90983,91998,92504,92844,93376,93575,94576,96913,98997,101903,102670,102700,102975,104460,104693,104907,106062,107766,110286,111805,114626],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[84550,95224,88021,95826,89405,103975,86326,89603,90900,107196,112174,115611,97667,97668,103912,90982,110593,83719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[106063,91999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The apex of the mating projection in unicellular fungi exposed to mating pheromone; site of polarized growth.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_03011":null,"SJAG_03123":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03646":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection tip","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube tip","type":"narrow"},{"name":"shmoo tip","type":"narrow"}],"termid":"GO:0043332","terms_by_termid":{"GO:0043332":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0045419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 4","termid":"PBO:0045419"}


id: GO:2000218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"negatively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"negative regulation of colony morphology","type":"related"}],"termid":"GO:2000218"}


id: PBO:0079559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAC2 antisense RNA 1","termid":"PBO:0079559"}


id: PBO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 23","termid":"PBO:0048072"}


id: FYPO:0007437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated continuously. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"constitutive activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"constitutive activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"constitutively activated of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007437"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: PR:Q9C0X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.15c gene.","definition_xrefs":["UniProtKB:Q9C0X3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.15c","synonyms":[{"name":"Spom972h-SPBC13G1.15c","type":"exact"}],"termid":"PR:Q9C0X3"}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


id: MOD:01265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#P","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site P","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01265"}


id: GO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reduction (obsolete GO:0006252)","synonyms":[{"name":"CTP reduction","type":"exact"}],"termid":"GO:0006252"}


id: PR:O13911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional polynucleotide phosphatase/kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00882","PRO:DNx","PANTHER:PTHR12083:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional polynucleotide phosphatase/kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.04c","secondary_identifiers":["UniProtKB:O13911"],"synonyms":[{"name":"DNA 5'-kinase/3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNKP","type":"exact"},{"name":"polynucleotide kinase-3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13911"}


id: PBO:0063408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 4","termid":"PBO:0063408"}


id: GO:0006794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary phosphorus source and then activates genes to scavenge the last traces of the primary phosphorus source and to transport and metabolize alternative phosphorus sources. The utilization process begins when the cell or organism detects phosphorus levels, includes the phosphorus-containing substances, and ends when phosphorus is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphorus utilization","termid":"GO:0006794"}


id: GO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"positively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"activation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"positive regulation of lateral plate mesodermal cell fate specification","type":"exact"},{"name":"stimulation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"upregulation of lateral mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048379"}


id: GO:0036222
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114601],"is_not":false,"summary":null,"term":"GO:0036222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: XTP + H2O = XMP + H+ + diphosphate.","definition_xrefs":["GOC:pz","PMID:22531138","RHEA:28610","PMID:16216582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0047429"],"is_obsolete":false,"name":"XTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2509831","GO:0103024","KEGG_REACTION:R02720","MetaCyc:RXN0-5074","EC:3.6.1.66","MetaCyc:RXN0-1603"],"synonyms":[{"name":"XTP pyrophosphohydrolase activity","type":"exact"},{"name":"XTP/dITP diphosphatase","type":"related"},{"name":"XTPase activity","type":"exact"},{"name":"hypoxanthine/xanthine dNTP pyrophosphatase","type":"related"}],"termid":"GO:0036222","terms_by_termid":{"GO:0036222":null}}


id: PBO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0002869"}


id: PBO:0068042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 347","termid":"PBO:0068042"}


id: PBO:0068100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 407","termid":"PBO:0068100"}


id: PBO:0083490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR301W; YBR300C is not an essential gene","termid":"PBO:0083490"}


id: GO:0140743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33913806","PMID:33767452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ncRNA transcription","termid":"GO:0140747"},{"relation_name":"regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of lncRNA transcription","termid":"GO:0140743"}


id: GO:0120143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of any ecdysone receptor-mediated signaling pathway.","definition_xrefs":["PMID:23072462","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor-mediated signaling pathway","termid":"GO:0120141"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to alcohol","termid":"GO:1905958"},{"relation_name":"negatively_regulates","term_name":"ecdysone receptor-mediated signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ecdysone receptor-mediated signaling pathway","termid":"GO:0120143"}


id: GO:0006517
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglycosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein deglycosylation","type":"exact"}],"termid":"GO:0006517","terms_by_termid":{"GO:1904380":null}}


id: GO:0034980
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains CREB and FHL2, and is involved in transcriptional regulation.","definition_xrefs":["PMID:11046156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FHL2-CREB complex","termid":"GO:0034980"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: MOD:01753
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01753"}


id: GO:1902263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in embryonic digit morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:dph","PMID:15967824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"embryonic digit morphogenesis","termid":"GO:0042733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in embryonic digit morphogenesis","synonyms":[{"name":"apoptosis involved in embryonic digit morphogenesis","type":"narrow"},{"name":"apoptotic cell death involved in embryonic digit morphogenesis","type":"exact"},{"name":"apoptotic program involved in embryonic digit morphogenesis","type":"narrow"},{"name":"apoptotic programmed cell death involved in embryonic digit morphogenesis","type":"exact"},{"name":"programmed cell death by apoptosis involved in embryonic digit morphogenesis","type":"exact"},{"name":"signaling (initiator) caspase activity involved in embryonic digit morphogenesis","type":"related"},{"name":"type I programmed cell death involved in embryonic digit morphogenesis","type":"narrow"}],"termid":"GO:1902263"}


id: PBO:0042159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 20","termid":"PBO:0042159"}


id: PBO:0058511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-1","termid":"PBO:0058511"}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: PBO:0051958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 1","termid":"PBO:0051958"}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: PR:O14059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.01","synonyms":[{"name":"HolPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1672.01","type":"exact"}],"termid":"PR:O14059"}


id: GO:2000741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"}


id: PBO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18","termid":"PBO:0075248"}


id: PBO:0057976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3691","termid":"PBO:0057976"}


id: GO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity by stopping, preventing or reducing tyrosine phosphorylation of JAK1 and thereby activation of JAK1.","definition_xrefs":["PMID:12620806"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host JAK1 activity by negative regulation of JAK1 phosphorylation (obsolete GO:0039577)","termid":"GO:0039577"}


id: GO:0043024
data:
  {"annotated_genes":["SJAG_02061","SJAG_01117","SJAG_03658"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99160,99296,102837],"is_not":false,"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a small ribosomal subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01117":null,"SJAG_02061":null,"SJAG_03658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribosomal small subunit binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043024","terms_by_termid":{"GO:0043024":null}}


id: PBO:0040357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 6","termid":"PBO:0040357"}


id: PBO:0029921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_squalene_level","termid":"PBO:0029921"}


id: PBO:0085289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisome-specific receptor important for peroxisome inheritance; co-fractionates with peroxisome membranes and co-localizes with peroxisomes in vivo; physically interacts with the myosin V motor Myo2p; INP2 is not an essential gene","termid":"PBO:0085289"}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:16048999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0029048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization","termid":"PBO:0029048"}


id: FYPO:0002235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular sterol ester level","synonyms":[{"name":"increased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"increased sterol ester accumulation","type":"related"}],"termid":"FYPO:0002235"}


id: PBO:0029088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029088"}


id: FYPO:0001150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylamine. Cells stop growing (and may die) at a concentration of methylamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to methylamine","synonyms":[{"name":"hypersensitive to methylamine","type":"exact"},{"name":"sensitive to methylamine during mitotic cell cycle","type":"related"},{"name":"sensitive to methylamine during vegetative growth","type":"exact"}],"termid":"FYPO:0001150"}


id: PBO:0089260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane hydrolase, implicted in protein catabolism or lipid metabolism","termid":"PBO:0089260"}


id: PBO:0082050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM can make people more likely to get cancer","termid":"PBO:0082050"}


id: PBO:0049893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 3","termid":"PBO:0049893"}


id: GO:0097093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["GOC:rs","PMID:19729090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"polyacyltrehalose metabolic process","termid":"GO:0097092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose biosynthetic process","synonyms":[{"name":"polyacyltrehalose anabolism","type":"exact"},{"name":"polyacyltrehalose biosynthesis","type":"exact"},{"name":"polyacyltrehalose formation","type":"exact"},{"name":"polyacyltrehalose synthesis","type":"exact"}],"termid":"GO:0097093"}


id: PBO:0064736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 72","termid":"PBO:0064736"}


id: GO:0050685
data:
  {"annotated_genes":["SJAG_00996","SJAG_00504","SJAG_02058","SJAG_01040","SJAG_02018","SJAG_01919"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[87658,91963,106797,73143,74308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00504":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA processing","type":"narrow"},{"name":"stimulation of mRNA processing","type":"narrow"},{"name":"up regulation of mRNA processing","type":"exact"},{"name":"up-regulation of mRNA processing","type":"exact"},{"name":"upregulation of mRNA processing","type":"exact"}],"termid":"GO:0050685","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: GO:0102245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupan-3beta,20-diol = (S)-2,3-epoxysqualene + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lupan-3beta,20-diol synthase activity","secondary_identifiers":["RHEA:31351","MetaCyc:RXN-12338"],"termid":"GO:0102245"}


id: GO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filopodium assembly","termid":"GO:0051489"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of filopodium assembly","synonyms":[{"name":"activation of filopodium formation","type":"narrow"},{"name":"positive regulation of filopodia biosynthesis","type":"exact"},{"name":"positive regulation of filopodia formation","type":"exact"},{"name":"positive regulation of filopodium formation","type":"exact"},{"name":"stimulation of filopodium formation","type":"narrow"},{"name":"up regulation of filopodium formation","type":"exact"},{"name":"up-regulation of filopodium formation","type":"exact"},{"name":"upregulation of filopodium formation","type":"exact"}],"termid":"GO:0051491"}


id: PBO:0090793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone Pac3","termid":"PBO:0090793"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: GO:0102447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 7,3'-dimethylquercetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"rhamnetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13933"],"termid":"GO:0102447"}


id: PBO:0027118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_zygotic_meiosis_II","termid":"PBO:0027118"}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: FYPO:0005858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered level of translation gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of translation gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of translation gene RNA during vegetative growth","type":"exact"},{"name":"altered level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"altered translation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005858"}


id: GO:1990250
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of identifying lesions in DNA on the actively transcribed strand of the DNA duplex as well as a small subset of lesions not recognized by the general nucleotide-excision repair pathway. The wide range of substrate specificity suggests that the repair complex recognizes distortions in the DNA helix. It subsequently recruits a nucleotide-excision repair, preincision complex.","definition_xrefs":["PMID:22331906","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990250"}


id: PBO:0076978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase 1","termid":"PBO:0076978"}


id: PBO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP-type peptidyl-prolyl cis-trans isomerase (predicted)","termid":"PBO:0002471"}


id: GO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a cardiac neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["PMID:18539270","PMID:17076275","GOC:hjd","PMID:20490374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell delamination","termid":"GO:0036032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cardiac neural crest cell delamination","termid":"GO:0036036"}


id: GO:0102782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + epidihydrocholesterin + O2 + NADPH = (22alpha)-hydroxy-cholestanol + H2O + NADP.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholestanol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7878"],"termid":"GO:0102782"}


id: FYPO:0001442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000891"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001442"}


id: GO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of immunoglobulin production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of immunoglobulin production","secondary_identifiers":["GO:0051023","GO:0002640"],"synonyms":[{"name":"regulation of antibody production","type":"exact"},{"name":"regulation of immunoglobulin biosynthetic process","type":"narrow"},{"name":"regulation of immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002637"}


id: PBO:0086531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 26% of ORF overlaps the dubious ORF YDR524C-A; insertion mutation in a cdc34-2 mutant background causes altered bud morphology","termid":"PBO:0086531"}


id: GO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-1 adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-1 adrenergic receptor binding","synonyms":[{"name":"beta-1 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031697"}


id: GO:0005227
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91613,105232],"is_not":false,"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient.","definition_xrefs":["GOC:dph","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium-activated cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9717383"],"synonyms":[{"name":"calcium activated cation channel activity","type":"exact"},{"name":"intracellular calcium-activated potassium channel","type":"narrow"},{"name":"polycystin","type":"narrow"}],"termid":"GO:0005227","terms_by_termid":{"GO:0005227":null}}


id: PBO:0042269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 4","termid":"PBO:0042269"}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GO_REF:0000058","PMID:25717181","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: GO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"regulation of MAV signaling","type":"narrow"},{"name":"regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039531"}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: PBO:0046619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group V member 2, envelope","termid":"PBO:0046619"}


id: SO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from genomic DNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_genomic_insert","synonyms":[{"name":"cloned genomic insert","type":"exact"}],"termid":"SO:0000914"}


id: PBO:0031053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_biorientation","termid":"PBO:0031053"}


id: PBO:0064201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAC8 like 1","termid":"PBO:0064201"}


id: GO:1902871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16872597","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of amacrine cell differentiation","termid":"GO:1902869"},{"relation_name":"positively_regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amacrine cell differentiation","synonyms":[{"name":"activation of amacrine cell differentiation","type":"narrow"},{"name":"activation of amacrine neuron differentiation","type":"narrow"},{"name":"positive regulation of amacrine neuron differentiation","type":"exact"},{"name":"up regulation of amacrine cell differentiation","type":"exact"},{"name":"up regulation of amacrine neuron differentiation","type":"exact"},{"name":"up-regulation of amacrine cell differentiation","type":"exact"},{"name":"up-regulation of amacrine neuron differentiation","type":"exact"},{"name":"upregulation of amacrine cell differentiation","type":"exact"},{"name":"upregulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902871"}


id: GO:0004999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with vasoactive intestinal polypeptide to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor activity","termid":"GO:0004999"}


id: GO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetylgalactosamine lectin (obsolete GO:0005533)","synonyms":[{"name":"N-acetylgalactosamine lectin","type":"exact"}],"termid":"GO:0005533"}


id: PBO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 4","termid":"PBO:0075174"}


id: GO:0043478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation in response to UV light","termid":"GO:0043478"}


id: GO:0097421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed liver.","definition_xrefs":["GOC:gap","PMID:19447520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver development","termid":"GO:0001889"},{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver regeneration","termid":"GO:0097421"}


id: GO:0034778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA = 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0034778"}


id: PBO:0056255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein like","termid":"PBO:0056255"}


id: PBO:0049575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 3, pseudogene","termid":"PBO:0049575"}


id: FYPO:0006108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly is abnormal. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin fusion focus assembly","synonyms":[{"name":"abnormal actin fusion focus formation","type":"exact"}],"termid":"FYPO:0006108"}


id: PBO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 4","termid":"PBO:0071575"}


id: FYPO:0009048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cysteine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to cysteine","synonyms":[{"name":"resistance to cysteine during mitotic cell cycle","type":"related"},{"name":"resistance to cysteine during vegetative growth","type":"exact"},{"name":"resistant to cysteine","type":"exact"}],"termid":"FYPO:0009048"}


id: PBO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 2","termid":"PBO:0051870"}


id: PBO:0090688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lysine-tRNA ligase Msk1","termid":"PBO:0090688"}


id: PBO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 52","termid":"PBO:0061392"}


id: PBO:0108712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGEF, implicated in endosomal transport","termid":"PBO:0108712"}


id: GO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}


id: GO:0031390
data:
  {"annotated_genes":["SJAG_01010","SJAG_02182","SJAG_00272","SJAG_00729","SJAG_02373","SJAG_00806","SJAG_02610"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85029,87196,89540,90879,91936,108172,108652],"is_not":false,"summary":null,"term":"GO:0031390"}]},"cv_name":"cellular_component","definition":"A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02610":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ctf18 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ctf18-RFC","type":"exact"},{"name":"Ctf18-RLC","type":"exact"},{"name":"RFC (Ctf18)","type":"exact"}],"termid":"GO:0031390","terms_by_termid":{"GO:0031390":null}}


id: PBO:0049489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-10 antisense RNA 1","termid":"PBO:0049489"}


id: PBO:0052791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 32","termid":"PBO:0052791"}


id: PBO:0028441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactose_level_in_glycoprotein_glycan","termid":"PBO:0028441"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: GO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of eosinophil degranulation","synonyms":[{"name":"activation of eosinophil degranulation","type":"narrow"},{"name":"positive regulation of eosinophil granule exocytosis","type":"exact"},{"name":"stimulation of eosinophil degranulation","type":"narrow"},{"name":"up regulation of eosinophil degranulation","type":"exact"},{"name":"up-regulation of eosinophil degranulation","type":"exact"},{"name":"upregulation of eosinophil degranulation","type":"exact"}],"termid":"GO:0043311"}


id: GO:2001243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of intrinsic apoptosis","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001243"}


id: SO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element bound by the MADS family of transcription factors with consensus 5'-(C/T)TA(T/A)4TA(G/A)-3'.","definition_xrefs":["PMID:1748287","PMID:7623803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CArG_box","synonyms":[{"name":"CArG box","type":"exact"}],"termid":"SO:0002156"}


id: PBO:0042147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 5","termid":"PBO:0042147"}


id: GO:0043243
data:
  {"annotated_genes":["SJAG_04312","SJAG_05265","SJAG_02812","SJAG_02433","SJAG_02189","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[97572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[107863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[68366,66462,90400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02433":null,"SJAG_02812":null,"SJAG_03126":null,"SJAG_04312":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex disassembly","type":"narrow"},{"name":"positive regulation of protein complex disassembly","type":"related"},{"name":"stimulation of protein complex disassembly","type":"narrow"},{"name":"up regulation of protein complex disassembly","type":"exact"},{"name":"up-regulation of protein complex disassembly","type":"exact"},{"name":"upregulation of protein complex disassembly","type":"exact"}],"termid":"GO:0043243","terms_by_termid":{"GO:0031117":null,"GO:0045905":null,"GO:1901098":null,"GO:1904595":null}}


id: PBO:0038400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_physical_entity_and_a_process_or_stage","termid":"PBO:0038400"}


id: PBO:0063625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 1","termid":"PBO:0063625"}


id: PBO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 39","termid":"PBO:0070931"}


id: FYPO:0005438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA/DNA annealing activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000653","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}


id: FYECO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bortezomib was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bortezomib","termid":"FYECO:0000322"}


id: GO:0099015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The catabolic breakdown of the DNA of a host chromosome by a virus. This occurs during infection of bacteria by some phages. It frees up a large pool of nucleoside 5'-triphophates for use in viral DNA synthesis.","definition_xrefs":["VZ:3947","PMID:163355","PMID:335083","PMID:3972821","PMID:5263754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolism by virus of host DNA","termid":"GO:0039637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"degradation of host chromosome by virus","termid":"GO:0099015"}


id: MOD:00338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-cyano-L-cysteine.","definition_xrefs":["RESID:AA0333","PubMed:4808702","Unimod:438#C","PubMed:12586941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-cyano-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-thiocyanatopropanoic acid","type":"exact"},{"name":"Cyano","type":"related"},{"name":"MOD_RES S-cyanocysteine","type":"exact"},{"name":"S-cyano-L-cysteine","type":"exact"},{"name":"S-cyanocysteine","type":"exact"},{"name":"alpha-amino-beta-thiocyanatopropionic acid","type":"exact"},{"name":"beta-thiocyanatoalanine","type":"exact"},{"name":"cyano","type":"related"},{"name":"serine thiocyanic acid ester","type":"exact"}],"termid":"MOD:00338"}


id: PBO:0088737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit, hira family Hip1","termid":"PBO:0088737"}


id: PBO:0060026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 14","termid":"PBO:0060026"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: PBO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_in_stationary_phase","termid":"PBO:0030923"}


id: PBO:0073446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFR1 pseudogene 2","termid":"PBO:0073446"}


id: GO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"part_of","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme oxidation","synonyms":[{"name":"haem oxidation","type":"exact"}],"termid":"GO:0006788"}


id: PBO:0050868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin degrading enzyme","termid":"PBO:0050868"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: PBO:0026995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis_I","termid":"PBO:0026995"}


id: PBO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 7 pseudogene","termid":"PBO:0062166"}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: PBO:0074736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 94","termid":"PBO:0074736"}


id: PBO:0066644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 2","termid":"PBO:0066644"}


id: PBO:0066661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPK2 divergent transcript","termid":"PBO:0066661"}


id: FYPO:0002081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N-tosyl-L-phenylalanyl chloromethyl ketone (TPCK).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on TPCK","synonyms":[{"name":"normal cell population growth in presence of TPCK","type":"exact"},{"name":"normal cell population growth on N-tosyl-L-phenylalanyl chloromethyl ketone","type":"exact"},{"name":"normal cell population growth on TPCK","type":"exact"},{"name":"normal cellular response to TPCK","type":"related"},{"name":"normal vegetative cell population growth on TPCK","type":"exact"}],"termid":"FYPO:0002081"}


id: GO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initial attachment of a transport vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during a non-exocytotic process.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nonexocytotic vesicle docking (obsolete GO:0048277)","synonyms":[{"name":"non-exocytotic vesicle docking","type":"exact"},{"name":"nonexocytotic vesicle docking","type":"exact"}],"termid":"GO:0048277"}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: GO:0033374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to secretory granule","termid":"GO:0033366"},{"relation_name":"part_of","term_name":"T cell secretory granule organization","termid":"GO:0033371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to T cell secretory granule","synonyms":[{"name":"protein localisation in T cell secretory granule","type":"exact"},{"name":"protein localization in T cell secretory granule","type":"exact"},{"name":"protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"protein localization in T-cell secretory granule","type":"exact"},{"name":"protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033374"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"exact"}],"termid":"GO:0009994"}


id: GO:0098905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell of the bundle of His. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bundle of His cell action potential","synonyms":[{"name":"regulation of bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0098905"}


id: GO:0034067
data:
  {"annotated_genes":["SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94395],"is_not":false,"summary":null,"term":"GO:0034067"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072600","GO:0000042"],"synonyms":[{"name":"establishment of protein localisation to Golgi","type":"narrow"},{"name":"establishment of protein localization in Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi apparatus","type":"narrow"},{"name":"protein localisation in Golgi apparatus","type":"exact"},{"name":"protein localization in Golgi apparatus","type":"exact"},{"name":"protein targeting to Golgi","type":"related"},{"name":"protein-Golgi targeting","type":"related"}],"termid":"GO:0034067","terms_by_termid":{"GO:0034067":null}}


id: PBO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 2","termid":"PBO:0044051"}


id: PBO:0054003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1331","termid":"PBO:0054003"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: PBO:0062317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 2","termid":"PBO:0062317"}


id: PBO:0080600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 35","termid":"PBO:0080600"}


id: GO:0071988
data:
  {"annotated_genes":["SJAG_05220","SJAG_04455","SJAG_03508","SJAG_03915","SJAG_02529","SJAG_01546","SJAG_00229","SJAG_01211","SJAG_06270","SJAG_02514","SJAG_03376","SJAG_04468","SJAG_01371","SJAG_00918","SJAG_00883","SJAG_01775","SJAG_01790","SJAG_03437","SJAG_05266","SJAG_02731","SJAG_01224","SJAG_05319","SJAG_00082","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100804,103369,106041,96989,89033,91263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[103053],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[86776,92513,109908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[85474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[104735,92415,96218,112928,84601,94307,85211,105760,86468,103327,110067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[96658,102190],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902542"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the spindle pole body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02731":null,"SJAG_03376":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to spindle pole body","type":"exact"}],"termid":"GO:0071988","terms_by_termid":{"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902542":null,"GO:1902543":null,"GO:1990976":null}}


id: PBO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf24","termid":"PBO:0005788"}


id: PR:Q9P7I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.19c","synonyms":[{"name":"Spom972h-nts1","type":"exact"}],"termid":"PR:Q9P7I7"}


id: SO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an mRNA that is recoded.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded","termid":"SO:0000881"},{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_recoded_mRNA","synonyms":[{"name":"gene with recoded mRNA","type":"exact"}],"termid":"SO:0000693"}


id: PBO:0059277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L36 pseudogene 1","termid":"PBO:0059277"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: PBO:0053236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 2","termid":"PBO:0053236"}


id: FYPO:0001486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during cellular response to osmotic stress","termid":"FYPO:0003793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to salt stress","synonyms":[{"name":"normal RNA accumulation during cellular response to salt stress","type":"related"},{"name":"normal RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to salt stress","type":"narrow"},{"name":"normal transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001486"}


id: GO:1903149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any adenine transmembrane transporter activity that is involved in adenine import into cell.","definition_xrefs":["GOC:dos","GO_REF:0000061","GOC:TermGenie","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine transmembrane transporter activity involved in adenine import into cell (obsolete GO:1903149)","synonyms":[{"name":"adenine transmembrane transporter activity involved in adenine import into cell","type":"exact"}],"termid":"GO:1903149"}


id: PBO:0079763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin recognition factor in ER associated degradation 1","termid":"PBO:0079763"}


id: GO:0004730
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101282],"is_not":false,"summary":null,"term":"GO:0004730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + uracil = H2O + pseudouridine 5'-phosphate.","definition_xrefs":["RHEA:18337","EC:4.2.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pseudouridylate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01055","MetaCyc:RXN0-5398"],"synonyms":[{"name":"5-ribosyluracil 5-phosphate synthetase activity","type":"related"},{"name":"pseudouridine monophosphate synthase activity","type":"exact"},{"name":"pseudouridine monophosphate synthetase activity","type":"related"},{"name":"pseudouridine-5'-phosphate glycosidase activity","type":"exact"},{"name":"pseudouridylate synthetase activity","type":"related"},{"name":"pseudouridylic acid synthetase activity","type":"related"},{"name":"psiUMP synthetase activity","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate)","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate; pseudouridine-5'-phosphate-forming)","type":"related"},{"name":"uracil hydrolyase activity","type":"related"}],"termid":"GO:0004730","terms_by_termid":{"GO:0004730":null}}


id: GO:0022854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a large uncharged polar molecule from one side of the membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete active large uncharged polar molecule transmembrane transporter activity (obsolete GO:0022854)","synonyms":[{"name":"active large uncharged polar molecule transmembrane transporter activity","type":"exact"}],"termid":"GO:0022854"}


id: PBO:0057990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-2","termid":"PBO:0057990"}


id: PBO:0056673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 31","termid":"PBO:0056673"}


id: PBO:0027682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_conjugation","termid":"PBO:0027682"}


id: PBO:0048255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 3","termid":"PBO:0048255"}


id: PATO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000497 relative rhythym value (obsolete PATO:0000497)","termid":"PATO:0000497"}


id: PBO:0072348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 34","termid":"PBO:0072348"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: PBO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","termid":"PBO:0090102"}


id: GO:0038094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of immunoglobulin G (IgG) to an Fc-gamma receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","PMID:11244038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor signaling pathway","termid":"GO:0038093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway","synonyms":[{"name":"Fc-gamma receptor signalling pathway","type":"exact"}],"termid":"GO:0038094"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: PBO:0081848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 781","termid":"PBO:0081848"}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: PBO:0077949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 8-2","termid":"PBO:0077949"}


id: GO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ammonium ions from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"transepithelial ammonium transport","termid":"GO:0070634"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: GO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of natriuresis (obsolete GO:0003078)","synonyms":[{"name":"regulation of natriuresis","type":"exact"}],"termid":"GO:0003078"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["GOC:giardia","GOC:pr","PMID:23937520","PMID:24070999","PMID:24002067","PMID:23499754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: PBO:0075880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 pseudogene 1","termid":"PBO:0075880"}


id: PBO:0063860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piercer of microtubule wall 2","termid":"PBO:0063860"}


id: PBO:0026958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization_behind_moving_spindle_pole_body","termid":"PBO:0026958"}


id: PBO:0061958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 14","termid":"PBO:0061958"}


id: PBO:0060928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofascin","termid":"PBO:0060928"}


id: GO:1905880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogenesis","synonyms":[{"name":"down regulation of oogenesis","type":"exact"},{"name":"down regulation of ovum development","type":"exact"},{"name":"down-regulation of oogenesis","type":"exact"},{"name":"down-regulation of ovum development","type":"exact"},{"name":"downregulation of oogenesis","type":"exact"},{"name":"downregulation of ovum development","type":"exact"},{"name":"inhibition of oogenesis","type":"narrow"},{"name":"inhibition of ovum development","type":"narrow"},{"name":"negative regulation of ovum development","type":"exact"}],"termid":"GO:1905880"}


id: FYPO:0005806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of movement of one or more proteins within the plasma membrane of the lateral part of the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of protein movement within plasma membrane at cell side","synonyms":[{"name":"normal rate of protein movement within plasma membrane at cell side during mitotic cell cycle","type":"related"},{"name":"normal rate of protein movement within plasma membrane at cell side during vegetative growth","type":"exact"},{"name":"normal rate of protein movement within plasma membrane at lateral part of cell","type":"exact"}],"termid":"FYPO:0005806"}


id: FYPO:0003695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free small ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic small ribosomal subunit level","synonyms":[{"name":"cytosolic small ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 40S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic small ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic small ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased level of cytosolic small ribosomal subunits","type":"related"},{"name":"decreased small ribosomal subunit level","type":"broad"},{"name":"reduced cytosolic small ribosomal subunit level","type":"exact"}],"termid":"FYPO:0003695"}


id: PBO:0045000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer 1, ribonuclease III","termid":"PBO:0045000"}


id: GO:1903487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactation.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:19563620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lactation","termid":"GO:1903487"}


id: PBO:0047198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member A","termid":"PBO:0047198"}


id: GO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized structure unique to microsporidia that is required for host cell invasion. In the spore, the polar tube is connected at the anterior end, and then coils around the sporoplasm. Upon appropriate environmental stimulation, the polar tube rapidly discharges out of the spore, pierces a cell membrane and serves as a conduit for sporoplasm passage into the new host cell.","definition_xrefs":["GOC:mf","PMID:12076771","PMID:9723921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar tube","termid":"GO:0044099"}


id: GO:1900960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900960"}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: PBO:0040528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin","termid":"PBO:0040528"}


id: PBO:0029533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuole_fusion_during_cellular_hypotonic_response","termid":"PBO:0029533"}


id: GO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephros development","termid":"GO:0061218"}


id: GO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly or disassembly of intermediate filaments by the addition or removal of component parts from a filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}


id: PBO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 8","termid":"PBO:0042982"}


id: GO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of the larval eye in Drosophila are generated and organized. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["PMID:6185380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"Bolwig's organ development","termid":"GO:0055034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ morphogenesis","termid":"GO:0001746"}


id: GO:0033534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah","MetaCyc:CPD-8065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"verbascose metabolic process","termid":"GO:0033533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"verbascose biosynthetic process","synonyms":[{"name":"verbascose anabolism","type":"exact"},{"name":"verbascose biosynthesis","type":"exact"},{"name":"verbascose formation","type":"exact"},{"name":"verbascose synthesis","type":"exact"}],"termid":"GO:0033534"}


id: PBO:0059445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A18","termid":"PBO:0059445"}


id: PBO:0079857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B6 (pseudogene)","termid":"PBO:0079857"}


id: PBO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBPL divergent transcript","termid":"PBO:0061603"}


id: PBO:0061113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 4","termid":"PBO:0061113"}


id: PBO:0078447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P2","termid":"PBO:0078447"}


id: PBO:0042876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 144","termid":"PBO:0042876"}


id: SO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons ATH (ATT, ATC and ATA).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine","synonyms":[{"name":"I","type":"exact"},{"name":"Ile","type":"exact"}],"termid":"SO:0001438"}


id: PBO:0075719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRI antisense RNA 1","termid":"PBO:0075719"}


id: PATO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops.","definition_xrefs":["Online_Dictionary:Online_Dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiling","termid":"PATO:0001794"}


id: PBO:0069853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1139, pseudogene","termid":"PBO:0069853"}


id: PBO:0081182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type and G-patch domain containing","termid":"PBO:0081182"}


id: GO:0035538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate response element (ChoRE) found in the promoters of genes whose expression is regulated in response to carbohydrates, such as the triglyceride synthesis genes.","definition_xrefs":["PMID:20001964","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0000976","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"carbohydrate response element binding","synonyms":[{"name":"ChoRE binding","type":"exact"}],"termid":"GO:0035538"}


id: GO:0033950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the exohydrolysis of 1,4-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific exo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.155-RXN"],"synonyms":[{"name":"Cel74A","type":"related"},{"name":"[(1->6)-alpha-D-xylo]-(1->4)-beta-D-glucan exo-glucohydrolase activity","type":"related"}],"termid":"GO:0033950"}


id: PBO:0056478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 1","termid":"PBO:0056478"}


id: PBO:0078341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 7-1","termid":"PBO:0078341"}


id: PBO:0038674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 1","termid":"PBO:0038674"}


id: PBO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033790"}


id: SO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region essential for the specific initiation of transcription at a defined location in a DNA molecule, although this location might not be one single base. It is recognized by a specific RNA polymerase(RNAP)-holoenzyme, and this recognition is not necessarily autonomous.","definition_xrefs":["PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokaryotic_promoter","synonyms":[{"name":"Prokaryotic promoter","type":"exact"}],"termid":"SO:0002222"}


id: GO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in nephron morphogenesis","type":"narrow"}],"termid":"GO:0072046"}


id: SO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a variant from the genomic sequence is rarely found in the general population. The threshold for 'rare' varies between studies.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_variant","synonyms":[{"name":"rare variant","type":"exact"}],"termid":"SO:0001765"}


id: GO:0051546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a keratinocyte, epidermal cells which synthesize keratin, from one site to another.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte migration","termid":"GO:0051546"}


id: PATO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"having extra function","termid":"PATO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased functionality","synonyms":[{"name":"high functionality","type":"exact"}],"termid":"PATO:0001625"}


id: GO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of ovarian cells, an organelle derived from the spectrosome. It anchors the mitotic spindle pole to provide orientation during cystoblast cell divisions.","definition_xrefs":["GOC:jl","GOC:mah","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian fusome organization","synonyms":[{"name":"ovarian fusome organisation","type":"exact"},{"name":"ovarian fusome organization and biogenesis","type":"related"}],"termid":"GO:0030723"}


id: PBO:0027656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027656"}


id: PBO:0078388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-3","termid":"PBO:0078388"}


id: PBO:0039207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 1","termid":"PBO:0039207"}


id: SO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is paralogous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paralogous","termid":"SO:0000859"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Paralog#Paralogy"],"synonyms":[{"name":"paralog","type":"exact"},{"name":"paralogous region","type":"exact"},{"name":"paralogue","type":"exact"}],"termid":"SO:0000854"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: PR:Q09174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gma12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.04c","synonyms":[{"name":"Spom972h-gma12","type":"exact"}],"termid":"PR:Q09174"}


id: FYPO:0004045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"},{"relation_name":"is_a","term_name":"tetranucleate vegetative cell with fragmented septum","termid":"FYPO:0004046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"elongated tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell with fragmented septum","type":"exact"}],"termid":"FYPO:0004045"}


id: PBO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 2","termid":"PBO:0045890"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: PBO:0031301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_vegetative_cell","termid":"PBO:0031301"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: PBO:0067385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 489, pseudogene","termid":"PBO:0067385"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["EC:4.2.1.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"colnelenate synthase activity","secondary_identifiers":["MetaCyc:RXN-8498","RHEA:28178"],"termid":"GO:0102896"}


id: FYPO:0006533
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115360,115361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115339,115343,115332,115331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell periphery","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery","type":"exact"}],"termid":"FYPO:0006533","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: FYPO:0001917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, contains a single septum, has one nucleus in the septated cell, and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated monoseptate vegetative cell","termid":"FYPO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000337","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable elongated mononucleate monoseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable long monoseptate mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001917"}


id: PBO:0079774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 6-dehydrogenase","termid":"PBO:0079774"}


id: PBO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 7","termid":"PBO:0045728"}


id: GO:0044127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont regulates its progression from an initial condition to a later condition, within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development of symbiont in host","termid":"GO:0044127"}


id: FYPO:0001430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested before cells have replicated genomic DNA, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased number of cells with 1C DNA content","termid":"FYPO:0001974"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with unreplicated DNA","synonyms":[{"name":"abnormal cell cycle arrest with unreplicated DNA during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with 1C DNA content","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with unreplicated DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0001430"}


id: GO:0018802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate = pyruvate + succinic semialdehyde.","definition_xrefs":["PMID:8529896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity","secondary_identifiers":["UM-BBD_reactionID:r0370"],"termid":"GO:0018802"}


id: PBO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 26","termid":"PBO:0044342"}


id: PBO:0082068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methylbutanal reductase and NADPH-dependent methylglyoxal reductase; stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway; restores resistance to glycolaldehyde by coupling reduction of glycolaldehyde to ethylene glycol and oxidation of NADPH to NADP+; protein abundance increases in response to DNA replication stress; methylglyoxal reductase (NADPH-dependent) is also known as D-lactaldehyde dehydrogenase","termid":"PBO:0082068"}


id: PBO:0003901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase(MPP) complex alpha subunit Mas2 (predicted)","termid":"PBO:0003901"}


id: GO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"},{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"cellulose synthase (UDP-forming) activity","secondary_identifiers":["RHEA:19929","MetaCyc:CELLULOSE-SYNTHASE-UDP-FORMING-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan synthase activity","type":"related"},{"name":"1,4-beta-glucan synthase activity","type":"related"},{"name":"GS-I","type":"related"},{"name":"UDP-glucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-glucan synthase activity","type":"related"},{"name":"beta-1,4-glucan synthetase activity","type":"related"},{"name":"beta-1,4-glucosyltransferase activity","type":"related"},{"name":"beta-glucan synthase activity","type":"related"},{"name":"glucan synthase activity","type":"related"},{"name":"uridine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016760"}


id: FYPO:0000464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of intracellular transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased intracellular transport","synonyms":[{"name":"decreased intracellular transport during mitotic cell cycle","type":"related"},{"name":"decreased intracellular transport during vegetative growth","type":"exact"},{"name":"intracellular transport: decreased","type":"related"},{"name":"reduced intracellular transport","type":"exact"}],"termid":"FYPO:0000464"}


id: PBO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 17","termid":"PBO:0062234"}


id: PATO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000526 absolute drug sensitivity value (obsolete PATO:0000526)","termid":"PATO:0000526"}


id: SO:1000120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000120 sequence_variant_causing_inactive_catalytic_site (obsolete SO:1000120)","synonyms":[{"name":"mutation causing inactive catalytic site","type":"related"},{"name":"sequence variant causing inactive catalytic site","type":"exact"}],"termid":"SO:1000120"}


id: GO:0021638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve formation","synonyms":[{"name":"CN V biosynthesis","type":"related"},{"name":"CN V formation","type":"related"}],"termid":"GO:0021638"}


id: PBO:0074136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A1","termid":"PBO:0074136"}


id: PBO:0074058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A36 pseudogene 1","termid":"PBO:0074058"}


id: GO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response.","definition_xrefs":["PMID:15771571","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002768"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: GO:0160132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is composed of multifold plasma membrane of the epidermis where it is in direct contact with apical extracellular matrix. Meisosome, or multiple eisome is named because of its superficial similarity to yeast eisosome.","definition_xrefs":["PMID:36913486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"meisosome","termid":"GO:0160132"}


id: GO:0106104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate receptor clustering.","definition_xrefs":["PMID:28455372","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"glutamate receptor clustering","termid":"GO:0097688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate receptor clustering","termid":"GO:0106104"}


id: PBO:0035844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginase_activity","termid":"PBO:0035844"}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: GO:0042030
data:
  {"annotated_genes":["SJAG_03717","SJAG_04422","SJAG_02470"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96208,113936,113997],"is_not":false,"summary":null,"term":"GO:0042030"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces an ATP hydrolysis activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02470":null,"SJAG_03717":null,"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"ATPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosinetriphosphatase inhibitor","type":"exact"}],"termid":"GO:0042030","terms_by_termid":{"GO:0042030":null}}


id: PBO:0058043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4264","termid":"PBO:0058043"}


id: SO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the alteration of codon meaning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon_redefined","synonyms":[{"name":"codon redefined","type":"exact"}],"termid":"SO:0000882"}


id: PBO:0060270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 4","termid":"PBO:0060270"}


id: PBO:0028696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_telomere","termid":"PBO:0028696"}


id: GO:0047798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + cyclomaltodextrin = linear maltodextrin.","definition_xrefs":["EC:3.2.1.54","MetaCyc:CYCLOMALTODEXTRINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"cyclomaltodextrinase activity","secondary_identifiers":["RHEA:23980"],"synonyms":[{"name":"cyclodextrinase activity","type":"related"},{"name":"cycloheptaglucanase activity","type":"related"},{"name":"cyclohexaglucanase activity","type":"related"},{"name":"cyclomaltodextrin dextrin-hydrolase (decyclizing)","type":"related"}],"termid":"GO:0047798"}


id: FYPO:0007563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but in the absence of starvation (i.e., in nutrient-rich conditions, under which wild-type fission yeast cells do not arrest).","definition_xrefs":["PomBase:mah","PomBase:al","PMID:11554925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase in response to pheromone without starvation","synonyms":[{"name":"cell cycle arrest in mitotic G1 phase in response to pheromone in absence of starvation","type":"exact"},{"name":"mitotic cell cycle arrest in response to pheromone in absence of starvation","type":"broad"},{"name":"pheromone-induced mitotic cell cycle arrest in mitotic G1 phase without starvation","type":"exact"}],"termid":"FYPO:0007563"}


id: GO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"translation initiation ternary complex","synonyms":[{"name":"Met-tRNA/eIF2.GTP ternary complex","type":"narrow"},{"name":"translation initiation (ternary) complex","type":"exact"}],"termid":"GO:0044207"}


id: PBO:0069973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1268, pseudogene","termid":"PBO:0069973"}


id: PATO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000996 absolute viscosity value (obsolete PATO:0000996)","termid":"PATO:0000996"}


id: GO:1990694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi medial cisterna membrane (obsolete GO:1990694)","synonyms":[{"name":"intrinsic component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990694"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: PBO:0070708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 13","termid":"PBO:0070708"}


id: GO:0030888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell proliferation","synonyms":[{"name":"regulation of B lymphocyte proliferation","type":"exact"},{"name":"regulation of B-cell proliferation","type":"exact"},{"name":"regulation of B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0030888"}


id: PBO:0004774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 cleavage activating protein, Scap Scp1","termid":"PBO:0004774"}


id: PBO:0089346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim8-Tim13 mitochondrial intermembrane space protein transporter complex subunit Tim13","termid":"PBO:0089346"}


id: PBO:0069454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 719, pseudogene","termid":"PBO:0069454"}


id: GO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-dopa = 3,4-dihydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.49","RHEA:15273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"dihydroxyphenylalanine transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.49-RXN","KEGG_REACTION:R02077"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"DOPA aminotransferase activity","type":"related"},{"name":"L-dopa transaminase activity","type":"related"},{"name":"aspartate-DOPP transaminase (ADT)","type":"related"},{"name":"dihydroxyphenylalanine aminotransferase activity","type":"exact"},{"name":"dopa transaminase activity","type":"related"},{"name":"glutamate-DOPP transaminase (GDT)","type":"related"},{"name":"phenylalanine-DOPP transaminase (PDT)","type":"related"}],"termid":"GO:0047309"}


id: PBO:0055122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2541","termid":"PBO:0055122"}


id: PBO:0088348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1","termid":"PBO:0088348"}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: PBO:0082270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated S/T protein kinase; complexes with Snf4p and a Sip1p/Sip2p/Gal83p family member; required for glucose-repressed gene transcription, heat shock, sporulation, and peroxisome biogenesis; active form involved in mitotic spindle alignment in non-limiting glucose; regulates Hxk2p nucleocytoplasmic shuttling; regulates filamentous growth and acts as a non-canonical GEF-activating Arf3p during invasive growth; sumoylation inhibits Snf1p, targeting it for Ub-ligase mediated destruction","termid":"PBO:0082270"}


id: MOD:01503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01503"}


id: PBO:0066726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 23","termid":"PBO:0066726"}


id: PBO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 4","termid":"PBO:0050530"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["GOC:PARL","PMID:22939624","GOC:bhm","GOC:pad","PMID:21855797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: PBO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17 (predicted)","termid":"PBO:0003504"}


id: PBO:0072799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 5","termid":"PBO:0072799"}


id: PBO:0074161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F4","termid":"PBO:0074161"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: PBO:0061507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 2","termid":"PBO:0061507"}


id: GO:0030193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation","termid":"GO:0030193"}


id: FYECO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in the presence of cAMP. Presence can either imply exogenous addition of the chemical or the action of adenylate cyclase.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000023 presence of 3',5'-cyclic AMP (obsolete FYECO:0000023)","termid":"FYECO:0000023"}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: FYPO:0008190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere central core during meiotic prophase I","termid":"FYPO:0008190"}


id: PBO:0014585
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe DeUbiquitinating enzyme","termid":"PBO:0014585"}


id: GO:1900625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"positively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of monocyte aggregation","synonyms":[{"name":"activation of monocyte aggregation","type":"narrow"},{"name":"activation of mononuclear phagocyte aggregation","type":"exact"},{"name":"positive regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up regulation of monocyte aggregation","type":"exact"},{"name":"up regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up-regulation of monocyte aggregation","type":"exact"},{"name":"up-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"upregulation of monocyte aggregation","type":"exact"},{"name":"upregulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900625"}


id: PBO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_localization","termid":"PBO:0031689"}


id: GO:0106215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"negatively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"negative regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106215"}


id: PBO:0075833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 1","termid":"PBO:0075833"}


id: PBO:0073722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 2","termid":"PBO:0073722"}


id: FYPO:0002549
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115256,115268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[115267,115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta","pka1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"hypersensitive to stress","type":"exact"},{"name":"stress resistance: decreased","type":"related"}],"termid":"FYPO:0002549","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: PBO:0110065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Pan1","termid":"PBO:0110065"}


id: PBO:0091623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, hry1-antisense","termid":"PBO:0091623"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: PATO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000840 absolute auditory acuity value (obsolete PATO:0000840)","termid":"PATO:0000840"}


id: PBO:0111348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated WD repeat protein Utp4","termid":"PBO:0111348"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: SO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding locus that originates from within the promoter region of a protein-coding gene, with transcription proceeding in the opposite direction on the other strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA_gene","synonyms":[{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA gene","type":"exact"},{"name":"bidirectional_promoter_lncRNA_gene","type":"exact"}],"termid":"SO:0002185"}


id: PBO:0081296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 76","termid":"PBO:0081296"}


id: PBO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 6","termid":"PBO:0048887"}


id: PBO:0085619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; required for chromosome synapsis; forms a complex with Rec104p and Spo11p necessary during the initiation of recombination","termid":"PBO:0085619"}


id: PBO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7 pseudogene 1","termid":"PBO:0050800"}


id: PBO:0040083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARSD antisense RNA 1","termid":"PBO:0040083"}


id: GO:0070594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone response element (JHRE), a conserved sequence found in the promoters of genes whose expression is regulated in response to juvenile hormone.","definition_xrefs":["PMID:17956872","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0000976","GO:0003674"],"is_obsolete":false,"name":"juvenile hormone response element binding","synonyms":[{"name":"JHRE binding","type":"exact"}],"termid":"GO:0070594"}


id: SO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine_tRNA_primary_transcript","synonyms":[{"name":"serine tRNA primary transcript","type":"exact"}],"termid":"SO:0000226"}


id: PBO:0060212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12B","termid":"PBO:0060212"}


id: PBO:0058013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3939","termid":"PBO:0058013"}


id: GO:0034864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethylpentanal + H2O = 2,4,4-trimethylpentanoate + 3 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,4,4-trimethylpentanal dehydrogenase activity","termid":"GO:0034864"}


id: PBO:0005351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (predicted)","termid":"PBO:0005351"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: GO:1900712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"positively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tensidol B biosynthetic process","synonyms":[{"name":"activation of tensidol B anabolism","type":"exact"},{"name":"activation of tensidol B biosynthesis","type":"exact"},{"name":"activation of tensidol B biosynthetic process","type":"narrow"},{"name":"activation of tensidol B formation","type":"exact"},{"name":"activation of tensidol B synthesis","type":"exact"},{"name":"positive regulation of tensidol B anabolism","type":"exact"},{"name":"positive regulation of tensidol B biosynthesis","type":"exact"},{"name":"positive regulation of tensidol B formation","type":"exact"},{"name":"positive regulation of tensidol B synthesis","type":"exact"},{"name":"up regulation of tensidol B anabolism","type":"exact"},{"name":"up regulation of tensidol B biosynthesis","type":"exact"},{"name":"up regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up regulation of tensidol B formation","type":"exact"},{"name":"up regulation of tensidol B synthesis","type":"exact"},{"name":"up-regulation of tensidol B anabolism","type":"exact"},{"name":"up-regulation of tensidol B biosynthesis","type":"exact"},{"name":"up-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol B formation","type":"exact"},{"name":"up-regulation of tensidol B synthesis","type":"exact"},{"name":"upregulation of tensidol B anabolism","type":"exact"},{"name":"upregulation of tensidol B biosynthesis","type":"exact"},{"name":"upregulation of tensidol B biosynthetic process","type":"exact"},{"name":"upregulation of tensidol B formation","type":"exact"},{"name":"upregulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900712"}


id: GO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense-related programmed cell death","termid":"GO:0034053"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host defense-related programmed cell death","synonyms":[{"name":"down regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host defense-related PCD","type":"narrow"},{"name":"inhibition by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"inhibition of HR","type":"narrow"},{"name":"inhibition of host defense-related PCD","type":"narrow"},{"name":"inhibition of hypersensitive response","type":"narrow"},{"name":"negative regulation by symbiont of host defense-related PCD","type":"exact"},{"name":"negative regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of plant HR","type":"narrow"},{"name":"negative regulation by symbiont of plant hypersensitive response","type":"narrow"},{"name":"suppression by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"suppression of HR","type":"narrow"}],"termid":"GO:0034054"}


id: FYPO:0000831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of actinomycin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to actinomycin D","synonyms":[{"name":"resistance to actinomycin D during mitotic cell cycle","type":"related"},{"name":"resistance to actinomycin D during vegetative growth","type":"exact"},{"name":"resistant to actinomycin D","type":"exact"}],"termid":"FYPO:0000831"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: GO:0052148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host catalytic activity (obsolete GO:0052148)","synonyms":[{"name":"modulation by symbiont of host enzyme activity","type":"exact"},{"name":"modulation of catalytic activity of host by symbiont","type":"exact"},{"name":"regulation by symbiont of host catalytic activity","type":"exact"},{"name":"regulation of catalytic activity of host by symbiont","type":"exact"},{"name":"regulation of host catalytic activity by symbiont","type":"exact"}],"termid":"GO:0052148"}


id: GO:0098507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 5' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 5' dephosphorylation","termid":"GO:0098507"}


id: GO:0032292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon ensheathment","synonyms":[{"name":"ensheathment of axons in peripheral nervous system","type":"exact"}],"termid":"GO:0032292"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13718","RHEA:61116"],"termid":"GO:0102405"}


id: GO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-amino-2-methylpropanoate + pyruvate = 2-methyl-3-oxopropanoate + L-alanine.","definition_xrefs":["EC:2.6.1.40","RHEA:18393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"(R)-3-amino-2-methylpropionate-pyruvate transaminase activity","secondary_identifiers":["Reactome:R-HSA-909780","GO:0047314","KEGG_REACTION:R02050","MetaCyc:2.6.1.40-RXN"],"synonyms":[{"name":"(R)-3-amino-2-methylpropanoate aminotransferase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate:pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropionate--pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate-pyruvate aminotransferase activity","type":"exact"},{"name":"D-3-aminoisobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"D-3-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"D-3-aminoisobutyrate-pyruvate transaminase activity","type":"related"},{"name":"D-AIBAT activity","type":"related"},{"name":"D-beta-aminoisobutyrate:pyruvate aminotransferase activity","type":"related"},{"name":"beta-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0047305"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: GO:0098532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 27 of the histone.","definition_xrefs":["PMID:19270745"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 trimethylation (obsolete GO:0098532)","termid":"GO:0098532"}


id: PBO:0090023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis12","termid":"PBO:0090023"}


id: PBO:0084156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084156"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: PBO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 3","termid":"PBO:0060015"}


id: FYPO:0007481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an increase in the transcription of one or more target genes that would normally occur when cells are subjected to a stress in the presence of a specific small molecule occurs to a lower extent than normal under the same circumstances.","definition_xrefs":["PMID:31932483","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule","synonyms":[{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during mitotic cell cycle","type":"related"},{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during vegetative growth","type":"exact"}],"termid":"FYPO:0007481"}


id: GO:1990233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:bhm","PMID:16540464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}


id: PBO:0081414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 267","termid":"PBO:0081414"}


id: PBO:0052186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 18","termid":"PBO:0052186"}


id: GO:0034719
data:
  {"annotated_genes":["SJAG_00147","SJAG_05195","SJAG_03894","SJAG_01217","SJAG_01301","SJAG_03323"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90788,101670],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[87134,91606,97019,100318,104835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of several methylated Sm proteins with the SMN complex; the latter contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and unrip proteins; additional proteins, including galectin-1 and galectin-3, are also found in the SMN-SM complex. The SMN-Sm complex is involved in spliceosomal snRNP assembly in the cytoplasm.","definition_xrefs":["GOC:vw","PMID:11522829","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SMN-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034719","terms_by_termid":{"GO:0032797":null,"GO:0034719":null}}


id: GO:0008313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with the ligand Gurken to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken-activated receptor activity (obsolete GO:0008313)","synonyms":[{"name":"gurken receptor activity","type":"exact"}],"termid":"GO:0008313"}


id: GO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:add","GOC:dph","PMID:15365173","GOC:tb","PMID:15365178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina homeostasis","termid":"GO:0001895"}


id: GO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"}


id: GO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyisophthalic acid = salicylate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyisophthalate decarboxylase activity","termid":"GO:0034524"}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PMID:31911490","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos(T50)","type":"exact"}],"termid":"PR:000050454"}


id: _global:assayed_enzyme
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and an enzyme, usually a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_enzyme","termid":"_global:assayed_enzyme"}


id: PBO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Dnt1","termid":"PBO:0004626"}


id: GO:0018624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + toluene = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["RHEA:16737","EC:1.14.12.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"toluene dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0155","MetaCyc:TOLUENE-DIOXYGENASE-RXN","KEGG_REACTION:R03559"],"synonyms":[{"name":"toluene 1,2-dioxygenase activity","type":"related"},{"name":"toluene 2,3-dioxygenase activity","type":"related"},{"name":"toluene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018624"}


id: GO:0038010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the internalization of a signaling receptor activates or increases the frequency, rate or extent of signal transduction. Receptor internalization can enhance signaling by concentrating signaling molecules in one location, or by moving a ligand-activated receptor to the location of downstream signaling proteins. Endosomes for example can serve as important intracellular signaling platforms.","definition_xrefs":["PMID:17908284","PMID:19696798","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction by receptor internalization","synonyms":[{"name":"positive regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038010"}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: FYPO:0000671
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115217,115218,115219],"is_not":false,"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation at the rDNA repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal rDNA separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"abnormal rDNA separation during mitosis","type":"exact"},{"name":"abnormal rDNA separation during mitotic cell cycle","type":"related"},{"name":"abnormal rDNA separation during vegetative growth","type":"exact"},{"name":"abnormal ribosomal DNA separation","type":"exact"},{"name":"abnormal segregation of nucleolar rDNA","type":"related"}],"termid":"FYPO:0000671","terms_by_termid":{"FYPO:0000671":null}}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["GOC:als","PMID:22114352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: PBO:0004356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase (predicted)","termid":"PBO:0004356"}


id: GO:1990626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial outer membranes to form a single membrane.","definition_xrefs":["PMID:21385840","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial outer membrane fusion","synonyms":[{"name":"mitochondrion outer membrane fusion","type":"exact"}],"termid":"GO:1990626"}


id: GO:0043970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 9 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 acetylation (obsolete GO:0043970)","synonyms":[{"name":"histone H3 acetylation at K9","type":"exact"},{"name":"histone H3K9 acetylation","type":"exact"}],"termid":"GO:0043970"}


id: GO:2001190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"positively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"positive regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001190"}


id: PBO:0070178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 93 pseudogene","termid":"PBO:0070178"}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: FYPO:0000463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which flocculation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal flocculation (obsolete FYPO:0000463)","synonyms":[{"name":"flocculation: normal","type":"related"}],"termid":"FYPO:0000463"}


id: PBO:0058617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6749","termid":"PBO:0058617"}


id: PBO:0025437
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal metabolism disorders","termid":"PBO:0025437"}


id: PBO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 18","termid":"PBO:0050108"}


id: GO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a uropod by rearrangement of the cytoskeleton and overlying membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uropod organization","termid":"GO:0032796"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"uropod assembly","synonyms":[{"name":"uropod formation","type":"exact"}],"termid":"GO:0034460"}


id: GO:1904528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule binding.","definition_xrefs":["PMID:24520051","GOC:als","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule binding","synonyms":[{"name":"activation of microtubule binding","type":"narrow"},{"name":"activation of microtubule severing activity","type":"related"},{"name":"activation of microtubule/chromatin interaction","type":"related"},{"name":"positive regulation of microtubule severing activity","type":"related"},{"name":"positive regulation of microtubule/chromatin interaction","type":"related"},{"name":"up regulation of microtubule binding","type":"exact"},{"name":"up regulation of microtubule severing activity","type":"related"},{"name":"up regulation of microtubule/chromatin interaction","type":"related"},{"name":"up-regulation of microtubule binding","type":"exact"},{"name":"up-regulation of microtubule severing activity","type":"related"},{"name":"up-regulation of microtubule/chromatin interaction","type":"related"},{"name":"upregulation of microtubule binding","type":"exact"},{"name":"upregulation of microtubule severing activity","type":"related"},{"name":"upregulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904528"}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: PBO:0074391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 2","termid":"PBO:0074391"}


id: PBO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily E member 1","termid":"PBO:0044407"}


id: PBO:0068331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 38","termid":"PBO:0068331"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: PBO:0029311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_valproic_acid","termid":"PBO:0029311"}


id: PBO:0069988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1283, pseudogene","termid":"PBO:0069988"}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: PBO:0027519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiotic_interphase","termid":"PBO:0027519"}


id: PBO:0040435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2","termid":"PBO:0040435"}


id: PBO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_along","termid":"PBO:0034320"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine sulfation","termid":"GO:0050985"}


id: MOD:01525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01525"}


id: GO:2000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of determination of dorsal identity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of determination of dorsal identity","termid":"GO:2000015"},{"relation_name":"positively_regulates","term_name":"determination of dorsal identity","termid":"GO:0048263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of determination of dorsal identity","synonyms":[{"name":"positive regulation of determination of adaxial identity","type":"related"}],"termid":"GO:2000017"}


id: PBO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 28","termid":"PBO:0071730"}


id: GO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-galactoside (CMP) alpha-2,3-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9845538","Reactome:R-HSA-2046285","Reactome:R-HSA-4084984","MetaCyc:2.4.99.4-RXN","Reactome:R-HSA-1022129","Reactome:R-HSA-981497","Reactome:R-HSA-9605600","Reactome:R-HSA-9603987","Reactome:R-HSA-3656258","Reactome:R-HSA-9844860","Reactome:R-HSA-1912378","RHEA:21616"],"termid":"GO:0003836"}


id: GO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH.","definition_xrefs":["EC:1.1.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testosterone dehydrogenase [NAD(P)] activity","termid":"GO:0030283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"testosterone dehydrogenase (NAD+) activity","secondary_identifiers":["GO:0050327","RHEA:14929","MetaCyc:TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN","Wikipedia:3alpha(17beta)-hydroxysteroid_dehydrogenase_(NAD+)","KEGG_REACTION:R01836"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-hydroxysteroid:NAD+ 17-oxidoreductase activity","type":"related"},{"name":"3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity","type":"broad"},{"name":"3alpha(17beta)-HSD","type":"related"},{"name":"3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+)","type":"broad"},{"name":"3alpha(or 17beta)-hydroxysteroid:NAD+ oxidoreductase activity","type":"broad"},{"name":"3alpha,17beta-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"testosterone 17-beta-dehydrogenase (NAD+) activity","type":"exact"},{"name":"testosterone 17b-dehydrogenase activity","type":"exact"},{"name":"testosterone 17beta-dehydrogenase activity","type":"related"}],"termid":"GO:0047035"}


id: GO:0004725
data:
  {"annotated_genes":["SJAG_03263","SJAG_00214","SJAG_01161","SJAG_04332","SJAG_03131","SJAG_00082","SJAG_02013","SJAG_01667","SJAG_04166","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83147,83484,85479,87148,90141,90648,100992,107143,108262],"is_not":false,"summary":null,"term":"GO:0004725"},{"annotations":[87147,90647,99573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[83146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_01161":null,"SJAG_01667":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_03131":null,"SJAG_03263":null,"SJAG_04166":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016788","GO:0004721","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-74748","Reactome:R-HSA-997326","Reactome:R-HSA-8864036","Reactome:R-HSA-8863804","Reactome:R-HSA-74747","Reactome:R-HSA-877308","Reactome:R-HSA-8864125","Reactome:R-HSA-9635461","Reactome:R-HSA-9698408","Reactome:R-HSA-5683967","Reactome:R-HSA-1169188","Reactome:R-HSA-8855381","Reactome:R-HSA-1169192","Reactome:R-HSA-391868","Reactome:R-HSA-8852200","Reactome:R-HSA-8867658","Reactome:R-HSA-914036","Reactome:R-HSA-9603719","MetaCyc:PROTEIN-TYROSINE-PHOSPHATASE-RXN","Reactome:R-HSA-6807027","Reactome:R-HSA-8864029","Reactome:R-HSA-203797","Reactome:R-HSA-6807008","Reactome:R-HSA-8867047","Reactome:R-HSA-8937767","Reactome:R-HSA-202214","Reactome:R-HSA-9674816","Reactome:R-HSA-389758","Reactome:R-HSA-377643","Reactome:R-HSA-8849435","Reactome:R-HSA-997309","Reactome:R-HSA-997314","Reactome:R-HSA-9701507","Reactome:R-HSA-445089","RHEA:10684","Reactome:R-HSA-997311","Reactome:R-HSA-1549564","Reactome:R-HSA-9636439","Reactome:R-HSA-74733","Reactome:R-HSA-9700200","Reactome:R-HSA-1169210"],"synonyms":[{"name":"PPT-phosphatase activity","type":"related"},{"name":"PTP-phosphatase activity","type":"related"},{"name":"PTPase activity","type":"related"},{"name":"[phosphotyrosine]protein phosphatase activity","type":"related"},{"name":"phosphoprotein phosphatase (phosphotyrosine) activity","type":"related"},{"name":"phosphotyrosine histone phosphatase activity","type":"related"},{"name":"phosphotyrosine phosphatase activity","type":"related"},{"name":"phosphotyrosine protein phosphatase activity","type":"related"},{"name":"phosphotyrosylprotein phosphatase activity","type":"related"},{"name":"protein phosphotyrosine phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphate phosphohydrolase activity","type":"related"},{"name":"tyrosine O-phosphate phosphatase activity","type":"related"},{"name":"tyrosylprotein phosphatase activity","type":"related"}],"termid":"GO:0004725","terms_by_termid":{"GO:0004725":null,"GO:0004726":null,"GO:0033550":null}}


id: PBO:0079058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 13-1","termid":"PBO:0079058"}


id: PBO:0110477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGLA pseudogene 1","termid":"PBO:0110477"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: PBO:0049064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79, pseudogene","termid":"PBO:0049064"}


id: PBO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 receptor","termid":"PBO:0039617"}


id: GO:0102988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-hexadecadienoyl-CoA + O2 + a reduced electron acceptor = 9,12,15-cis-hexadecatrienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,12-cis-hexadecadienoic acid delta 15 desaturase activity","secondary_identifiers":["MetaCyc:RXN-9617","RHEA:46232"],"termid":"GO:0102988"}


id: PBO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin mu","termid":"PBO:0043966"}


id: PBO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs (predicted)","termid":"PBO:0002074"}


id: PBO:0091805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ClC chloride channel","termid":"PBO:0091805"}


id: GO:0099057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endocytic zone membrane (obsolete GO:0099057)","termid":"GO:0099057"}


id: GO:0010695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["PMID:16792804","GOC:dph","GOC:tb","PMID:18500339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle pole body separation","synonyms":[{"name":"regulation of SPB separation","type":"exact"}],"termid":"GO:0010695"}


id: PBO:0048879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member E, pseudogene","termid":"PBO:0048879"}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: PBO:0088929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc5","termid":"PBO:0088929"}


id: PBO:0060838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural precursor cell expressed, developmentally down-regulated 9","termid":"PBO:0060838"}


id: PBO:0071962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS6KA2 antisense RNA 1","termid":"PBO:0071962"}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: GO:0075113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated signal transduction (obsolete GO:0075113)","synonyms":[{"name":"positive regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075113"}


id: GO:1903013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365144","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"response to DIF-1","type":"related"},{"name":"response to DIF1","type":"related"}],"termid":"GO:1903013"}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: GO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a granulosa cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a granulosa cell fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell development","termid":"GO:0060016"}


id: GO:2000538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"positively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell chemotaxis","termid":"GO:2000538"}


id: GO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure (obsolete GO:0085002)","termid":"GO:0085002"}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: PR:P36619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin B resistance protein pmd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.03","synonyms":[{"name":"Spom972h-pmd1","type":"exact"}],"termid":"PR:P36619"}


id: FYPO:0007813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing stavudine.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on stavudine","synonyms":[{"name":"normal cell population growth in presence of stavudine","type":"exact"},{"name":"normal cell population growth on stavudine","type":"exact"},{"name":"normal vegetative cell population growth on stavudine","type":"exact"}],"termid":"FYPO:0007813"}


id: GO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + geranoyl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.4.1.5","RHEA:17701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"geranoyl-CoA carboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1166","KEGG_REACTION:R03494","MetaCyc:GERANOYL-COA-CARBOXYLASE-RXN"],"synonyms":[{"name":"geranoyl coenzyme A carboxylase activity","type":"related"},{"name":"geranoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"geranyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0047925"}


id: PBO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 51","termid":"PBO:0071632"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:21561865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PR:Q09855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.01","synonyms":[{"name":"Spom972h-pof11","type":"exact"},{"name":"meiotically up-regulated gene 156 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09855"}


id: FYPO:0002172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of nitrogen starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002172"}


id: PBO:0027487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_G0","termid":"PBO:0027487"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_03219","SJAG_02651","SJAG_02162","SJAG_00192","SJAG_00439","SJAG_01022","SJAG_03612","SJAG_02822","SJAG_01392","SJAG_00615","SJAG_03651","SJAG_00341","SJAG_02044","SJAG_02591","SJAG_04573"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84008,86079,91166,93430,94132,95311,98606,100778,111786,112717],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[86078,93429,89934,97833,100638,104928,106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_01392":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03612":null,"SJAG_03651":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: PBO:0030045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_iron_starvation","termid":"PBO:0030045"}


id: GO:0038177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with a death receptor such that the proportion of death receptors in an active form is increased. Ligand binding to a death receptor often induces a conformational change to activate the receptor.","definition_xrefs":["GOC:pr","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005515","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"death receptor agonist activity","synonyms":[{"name":"death receptor activator activity","type":"exact"}],"termid":"GO:0038177"}


id: PBO:0041358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 1","termid":"PBO:0041358"}


id: GO:0055038
data:
  {"annotated_genes":["SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99248],"is_not":false,"summary":null,"term":"GO:0055038"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a recycling endosome.","definition_xrefs":["GOC:rph","GOC:jid","PMID:15601896","PMID:16246101","PMID:10930469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"recycling endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055038","terms_by_termid":{"GO:0055038":null}}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: PBO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Gentian_violet","termid":"PBO:0030703"}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0081791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 721","termid":"PBO:0081791"}


id: GO:1900769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fonsecin biosynthetic process","synonyms":[{"name":"fonsecin anabolism","type":"exact"},{"name":"fonsecin biosynthesis","type":"exact"},{"name":"fonsecin formation","type":"exact"},{"name":"fonsecin synthesis","type":"exact"}],"termid":"GO:1900769"}


id: PBO:0039881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 40","termid":"PBO:0039881"}


id: FYPO:0001676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during S phase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic S phase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalised to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalized to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0001676"}


id: GO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs in the imaginal disc-derived wing along a proximal-distal axis, such that each cell of the wing produces one wing hair which points in a distal direction.","definition_xrefs":["GOC:ascb_2009","GOC:mtg_sensu","GOC:dph","GOC:tb","PMID:11239465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of imaginal disc-derived wing hair orientation","synonyms":[{"name":"establishment of wing hair orientation","type":"exact"}],"termid":"GO:0001737"}


id: PBO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion_during_vegetative_growth","termid":"PBO:0035731"}


id: PBO:0057790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3116-2","termid":"PBO:0057790"}


id: PBO:0061787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCRL inositol polyphosphate-5-phosphatase","termid":"PBO:0061787"}


id: PBO:0091698
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae sgt1","termid":"PBO:0091698"}


id: PBO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor EF-1 alpha (eEF1A) methyltransferase Efm4","termid":"PBO:0090543"}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: PBO:0078023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 13","termid":"PBO:0078023"}


id: PBO:0067863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 165","termid":"PBO:0067863"}


id: PBO:0063766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate regulating endopeptidase X-linked","termid":"PBO:0063766"}


id: PBO:0074971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-13","termid":"PBO:0074971"}


id: GO:0061157
data:
  {"annotated_genes":["SJAG_01836","SJAG_03745","SJAG_01521","SJAG_00854","SJAG_04321","SJAG_02213","SJAG_04153","SJAG_04818","SJAG_02239","SJAG_00759","SJAG_00285","SJAG_16457","SJAG_01910","SJAG_04350","SJAG_00966","SJAG_03597","SJAG_00343","SJAG_01625","SJAG_04084","SJAG_02370","SJAG_05322","SJAG_01944","SJAG_02540","SJAG_05010","SJAG_04006","SJAG_01818","SJAG_02725","SJAG_04824","SJAG_04825","SJAG_00686","SJAG_04427","SJAG_04880","SJAG_01191","SJAG_03883","SJAG_02383","SJAG_02036","SJAG_02808","SJAG_04407","SJAG_01053","SJAG_03876","SJAG_03157","SJAG_03113","SJAG_05694","SJAG_03179","SJAG_00391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66919],"is_not":false,"summary":null,"term":"GO:0061157"},{"annotations":[114303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[101939,105750,105801,107901,87035,109426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[103277,114290,111879,100172,102270,87750,111420,101035,91538,92895,88633,97805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[85160,93806,101038,91541,106948,88636,95608,109269,114293,111123,93719,100175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[87426,85251,88107,88979,86264,105053,89921,98772,103614,88013,111641,94191,113165,91133,112610,87490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87153],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"}]},"cv_name":"biological_process","definition":"Any process that decreases the stability of an mRNA molecule, making it more vulnerable to degradative processes. Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA destabilization","termid":"GO:0050779"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01836":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02725":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0061157","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:1990074":null}}


id: GO:1902325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["PMID:23555952","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chlorophyll biosynthetic process","synonyms":[{"name":"down regulation of chlorophyll anabolism","type":"exact"},{"name":"down regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down regulation of chlorophyll formation","type":"exact"},{"name":"down regulation of chlorophyll synthesis","type":"exact"},{"name":"down-regulation of chlorophyll anabolism","type":"exact"},{"name":"down-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down-regulation of chlorophyll formation","type":"exact"},{"name":"down-regulation of chlorophyll synthesis","type":"exact"},{"name":"downregulation of chlorophyll anabolism","type":"exact"},{"name":"downregulation of chlorophyll biosynthesis","type":"exact"},{"name":"downregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"downregulation of chlorophyll formation","type":"exact"},{"name":"downregulation of chlorophyll synthesis","type":"exact"},{"name":"inhibition of chlorophyll anabolism","type":"narrow"},{"name":"inhibition of chlorophyll biosynthesis","type":"narrow"},{"name":"inhibition of chlorophyll biosynthetic process","type":"narrow"},{"name":"inhibition of chlorophyll formation","type":"narrow"},{"name":"inhibition of chlorophyll synthesis","type":"narrow"},{"name":"negative regulation of chlorophyll anabolism","type":"exact"},{"name":"negative regulation of chlorophyll biosynthesis","type":"exact"},{"name":"negative regulation of chlorophyll formation","type":"exact"},{"name":"negative regulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902325"}


id: GO:1901233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in axis elongation","synonyms":[{"name":"down regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"down-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"downregulation of convergent extension involved in axis elongation","type":"exact"},{"name":"inhibition of convergent extension involved in axis elongation","type":"narrow"}],"termid":"GO:1901233"}


id: PBO:0066733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 30","termid":"PBO:0066733"}


id: PBO:0057832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3150a","termid":"PBO:0057832"}


id: GO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"positively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"positive regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070101"}


id: PBO:0080412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS39 divergent transcript","termid":"PBO:0080412"}


id: GO:0038190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:12852851","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"neuropilin signaling pathway","termid":"GO:0038189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"VEGF-activated neuropilin signaling pathway","synonyms":[{"name":"VEGF-Npn-1 signaling","type":"exact"},{"name":"vascular endothelial growth factor-activated neuropilin signaling pathway","type":"exact"}],"termid":"GO:0038190"}


id: PBO:0011492
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tagging Tra1 at its C-terminus is as detrimental as deletion","termid":"PBO:0011492"}


id: PBO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility like","termid":"PBO:0048486"}


id: SO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a sequence that is regulated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated","termid":"SO:0000119"}


id: PBO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 otholog","termid":"PBO:0017032"}


id: GO:0110154
data:
  {"annotated_genes":["SJAG_01625","SJAG_02370","SJAG_03023","SJAG_05010","SJAG_01746","SJAG_04880","SJAG_05694","SJAG_04640","SJAG_03157","SJAG_02374","SJAG_02213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105801,87035,105750,109426,101939,107901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000290"},{"annotations":[101362,88061,105751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031087"},{"annotations":[87036,105752,86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110156"},{"annotations":[87182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110155"},{"annotations":[87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of an RNA.","definition_xrefs":["PMID:25533955","GOC:sp","PMID:31101919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_01746":null,"SJAG_02213":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_04640":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA decapping","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110154","terms_by_termid":{"GO:0000290":null,"GO:0031087":null,"GO:0036450":null,"GO:0110155":null,"GO:0110156":null}}


id: PBO:0030276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_processing","termid":"PBO:0030276"}


id: PBO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS1 biogenesis of lysosomal organelles complex 3 subunit 1","termid":"PBO:0050543"}


id: FYPO:0005107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of mitotic DNA replication initiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of mitotic DNA replication initiation","synonyms":[{"name":"normal regulation of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"normal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005107"}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11124:SF3","OMA:SCHPO01555","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: PBO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2263","termid":"PBO:0054849"}


id: PBO:0061973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AL member 1 pseudogene","termid":"PBO:0061973"}


id: PBO:0056468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 antisense RNA 1","termid":"PBO:0056468"}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: GO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a small Cajal body-specific RNA is transported to, or maintained in, a Cajal body.","definition_xrefs":["GOC:BHF","PMID:25467444","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization to Cajal body","termid":"GO:0090670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"scaRNA localization to Cajal body","termid":"GO:0090666"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: PBO:0068215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 522","termid":"PBO:0068215"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: MOD:01637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine removal","termid":"MOD:01637"}


id: PBO:0089974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease","termid":"PBO:0089974"}


id: PBO:0003138
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAtabolism of aRginine, after cerevisiae","termid":"PBO:0003138"}


id: PBO:0068902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 144, pseudogene","termid":"PBO:0068902"}


id: GO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"negatively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of fatty acid oxidation","synonyms":[{"name":"down regulation of fatty acid oxidation","type":"exact"},{"name":"down-regulation of fatty acid oxidation","type":"exact"},{"name":"downregulation of fatty acid oxidation","type":"exact"},{"name":"inhibition of fatty acid oxidation","type":"narrow"}],"termid":"GO:0046322"}


id: GO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone secretion","synonyms":[{"name":"activation of hormone secretion","type":"narrow"},{"name":"stimulation of hormone secretion","type":"narrow"},{"name":"up regulation of hormone secretion","type":"exact"},{"name":"up-regulation of hormone secretion","type":"exact"},{"name":"upregulation of hormone secretion","type":"exact"}],"termid":"GO:0046887"}


id: GO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete F-actin capping activity (obsolete GO:0003782)","synonyms":[{"name":"F-actin capping activity","type":"exact"}],"termid":"GO:0003782"}


id: PBO:0090525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1","termid":"PBO:0090525"}


id: PBO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT Organizer","termid":"PBO:0005594"}


id: PBO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 9","termid":"PBO:0044037"}


id: GO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the intermediate mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"part_of","term_name":"intermediate mesoderm development","termid":"GO:0048389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}


id: PBO:0027056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_galactomannan_level","termid":"PBO:0027056"}


id: PBO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 82","termid":"PBO:0052816"}


id: PBO:0028009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028009"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: PBO:0049549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 12","termid":"PBO:0049549"}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: GO:0070747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-35 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-35 receptor activity","synonyms":[{"name":"IL-35 receptor activity","type":"exact"},{"name":"IL-35R","type":"exact"}],"termid":"GO:0070747"}


id: PBO:0074046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 28","termid":"PBO:0074046"}


id: PBO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0000454"}


id: GO:0006329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete satellite DNA binding (obsolete GO:0006329)","synonyms":[{"name":"satellite DNA binding","type":"exact"}],"termid":"GO:0006329"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["EC:4.2.1.27","MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity, producing 3-oxopropanoate","secondary_identifiers":["RHEA:17957","GO:0047607"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity","type":"broad"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"exact"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"exact"}],"termid":"GO:0050079"}


id: GO:0030240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in skeletal muscle.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"skeletal myofibril assembly","termid":"GO:0014866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"skeletal muscle thin filament assembly","termid":"GO:0030240"}


id: PBO:0070872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 3","termid":"PBO:0070872"}


id: PBO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSuppressor for K-252a Sensitivity","termid":"PBO:0017906"}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: PBO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030270"}


id: PBO:0091189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 8","termid":"PBO:0091189"}


id: PBO:0091481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png3","termid":"PBO:0091481"}


id: PBO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family","termid":"PBO:0014254"}


id: PBO:0059561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1E","termid":"PBO:0059561"}


id: GO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-8 complex","synonyms":[{"name":"laminin-411 complex","type":"exact"}],"termid":"GO:0043257"}


id: GO:0003747
data:
  {"annotated_genes":["SJAG_01696","SJAG_02601","SJAG_05221","SJAG_00308","SJAG_00338","SJAG_04283","SJAG_01518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86579,91565,94332,97795,102998,112030,113498],"is_not":false,"summary":null,"term":"GO:0003747"},{"annotations":[94333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[86580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Involved in catalyzing the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation termination factor activity","termid":"GO:0008079"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02601":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"}],"interesting_parent_ids":["GO:0003674","GO:0045182","GO:0005488"],"is_obsolete":false,"name":"translation release factor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003749","GO:0003748"],"termid":"GO:0003747","terms_by_termid":{"GO:0003747":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0086328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to tRNA synthetases; non-tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086328"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: PBO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfide_level","termid":"PBO:0030288"}


id: PBO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Cia1","termid":"PBO:0005579"}


id: PBO:0030061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_spindle_pole_body","termid":"PBO:0030061"}


id: PBO:0068527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 128, pseudogene","termid":"PBO:0068527"}


id: PBO:0081844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 778","termid":"PBO:0081844"}


id: PBO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STaurosporine Supersensitive","termid":"PBO:0024482"}


id: PBO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc22 transcription start sites at -267 and -275","termid":"PBO:0018253"}


id: PBO:0069042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 287, pseudogene","termid":"PBO:0069042"}


id: PBO:0052718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 10","termid":"PBO:0052718"}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_01693","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83206,113477],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.1.2","MetaCyc:SULFITE-REDUCT-RXN"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: PBO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 25","termid":"PBO:0070352"}


id: PBO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rix7 (predicted)","termid":"PBO:0003827"}


id: GO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G1 phase","secondary_identifiers":["Wikipedia:G1_phase"],"termid":"GO:0051318"}


id: GO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+.","definition_xrefs":["RHEA:21284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinol dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.105","Reactome:R-HSA-2454081","Reactome:R-HSA-2466832","Reactome:R-HSA-5362518","Reactome:R-HSA-5362721","MetaCyc:RETINOL-DEHYDROGENASE-RXN","Reactome:R-HSA-5362564"],"synonyms":[{"name":"all-trans retinol dehydrogenase activity","type":"broad"},{"name":"retinal reductase activity","type":"broad"},{"name":"retinene reductase activity","type":"broad"},{"name":"retinol (vitamin A1) dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase activity","type":"broad"}],"termid":"GO:0004745"}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: PBO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Pdr13 (predicted)","termid":"PBO:0001016"}


id: GO:0036266
data:
  {"annotated_genes":["SJAG_00948","SJAG_01134","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84712,100589,111752],"is_not":false,"summary":null,"term":"GO:0036266"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex involved in the release of polyubiquitinated proteins, including those damaged by oxidative stress, from the outer mitochondria membrane into the cytoplasm where they are presented to the proteasome for proteolysis, a process also referred to as mitochondria-associated degradation (MAD). In budding yeast, this complex includes Cdc48p, Npl4p and Vms1p.","definition_xrefs":["GOC:rn","PMID:21070972","PMID:21936843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Vms1p complex","type":"exact"},{"name":"Vms1-Cdc48-Npl4 complex","type":"exact"},{"name":"Vms1p-Cdc48p-Npl4p complex","type":"exact"}],"termid":"GO:0036266","terms_by_termid":{"GO:0036266":null}}


id: PBO:0040533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2 pseudogene 1","termid":"PBO:0040533"}


id: PBO:0042290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2BP2 divergent transcript","termid":"PBO:0042290"}


id: PBO:0005840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl1","termid":"PBO:0005840"}


id: GO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydropyrimidine (5,6-dihydrouracil or 5,6-dihydrothymine) + NAD+ = a pyrimidine (uracil or thymine) + NADH + H+.","definition_xrefs":["PMID:23150645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN","EC:1.3.1.1"],"synonyms":[{"name":"5,6-dihydrouracil:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrothymine dehydrogenase (NAD+) activity","type":"narrow"},{"name":"dihydrouracil dehydrogenase (NAD+) activity","type":"narrow"},{"name":"pyrimidine reductase activity","type":"related"},{"name":"thymine reductase activity","type":"narrow"},{"name":"uracil reductase activity","type":"narrow"}],"termid":"GO:0004159"}


id: GO:0009865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the pollen tube adheres to cells of the stigma and style.","definition_xrefs":["PMID:12602877","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"pollen tube adhesion","termid":"GO:0009865"}


id: PBO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 3","termid":"PBO:0072126"}


id: PBO:0053609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 642","termid":"PBO:0053609"}


id: PBO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 3","termid":"PBO:0075311"}


id: PBO:0040499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 1","termid":"PBO:0040499"}


id: PBO:0088112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress","termid":"PBO:0088112"}


id: PBO:0085823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; protein abundance increases in response to DNA replication stress","termid":"PBO:0085823"}


id: PR:Q9P6I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.10c","secondary_identifiers":["UniProtKB:Q9P6I0"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS2","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I0"}


id: GO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal development","termid":"GO:0060872"}


id: PBO:0056484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 1","termid":"PBO:0056484"}


id: PBO:0038935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1C (class I), gamma polypeptide","termid":"PBO:0038935"}


id: PR:Q9Y7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.11 gene.","definition_xrefs":["UniProtKB:Q9Y7X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C365.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.11","synonyms":[{"name":"Spom972h-SPBC365.11","type":"exact"}],"termid":"PR:Q9Y7X7"}


id: PBO:0077606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 12","termid":"PBO:0077606"}


id: PBO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 2","termid":"PBO:0044028"}


id: PBO:0052091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 8","termid":"PBO:0052091"}


id: PBO:0053242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 6","termid":"PBO:0053242"}


id: PBO:0055888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8D divergent transcript","termid":"PBO:0055888"}


id: PBO:0077817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 1","termid":"PBO:0077817"}


id: PBO:0054276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1666","termid":"PBO:0054276"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: PBO:0058567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6509","termid":"PBO:0058567"}


id: PATO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000753 spontaneous activity value (obsolete PATO:0000753)","termid":"PATO:0000753"}


id: GO:0000305
data:
  {"annotated_genes":["SJAG_03303","SJAG_05181","SJAG_03653","SJAG_04788","SJAG_00668","SJAG_04399","SJAG_01734","SJAG_04632","SJAG_04403","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94960,88697,105960,58052,113369,106008,84870,95844,68446,84437,65050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.","definition_xrefs":["ISBN:0124325653","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"},{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01199":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen radical","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0000305","terms_by_termid":{"GO:0019430":null}}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_01405","SJAG_05302","SJAG_03633","SJAG_01917","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110664],"is_not":false,"summary":null,"term":"GO:0051204"},{"annotations":[94691,96629,110663,109296,84252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null,"GO:0051204":null}}


id: PBO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 5","termid":"PBO:0075149"}


id: PBO:0045871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 4","termid":"PBO:0045871"}


id: PBO:0079212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 4","termid":"PBO:0079212"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: PBO:0057797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3119-2","termid":"PBO:0057797"}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: PR:P0CT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.05c","synonyms":[{"name":"Spom972h-rps1401","type":"exact"}],"termid":"PR:P0CT56"}


id: PBO:0057760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1973","termid":"PBO:0057760"}


id: PBO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 2","termid":"PBO:0045442"}


id: GO:0005530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Lectins are proteins obtained particularly from the seeds of leguminous plants, but also from many other plant and animal sources, that have binding sites for specific mono or oligosaccharides in cell walls or membranes. They thereby change the physiology of the membrane to cause agglutination, mitosis, or other biochemical changes in the cell.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lectin (obsolete GO:0005530)","synonyms":[{"name":"lectin","type":"exact"}],"termid":"GO:0005530"}


id: PBO:0110038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate dehydrogenase subunit 4","termid":"PBO:0110038"}


id: PBO:0051756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate multikinase","termid":"PBO:0051756"}


id: PBO:0089809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-hemoprotein reductase","termid":"PBO:0089809"}


id: PBO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.-","termid":"PBO:0005767"}


id: PBO:0077658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10a","termid":"PBO:0077658"}


id: GO:0014745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle adaptation","synonyms":[{"name":"negative regulation of muscle plasticity","type":"related"}],"termid":"GO:0014745"}


id: PBO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pot1 associated protein Poz1","termid":"PBO:0002349"}


id: PBO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 2","termid":"PBO:0043754"}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["PMID:21700835","GOC:pf","PMID:23910661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: GO:1905279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:23395371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905279"}


id: FYPO:0003545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is greater than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"increased duration of DNA replication checkpoint","type":"broad"},{"name":"increased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint activated","type":"related"},{"name":"prolonged mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0003545"}


id: PBO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 1","termid":"PBO:0044203"}


id: GO:0052009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of cell wall in another organism","termid":"GO:0044278"},{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell wall","synonyms":[{"name":"disassembly by symbiont of host cell wall","type":"exact"},{"name":"disruption by symbiont of host cell wall","type":"exact"}],"termid":"GO:0052009"}


id: PBO:0054339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1732","termid":"PBO:0054339"}


id: PBO:0050556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR lysine demethylase and nuclear receptor corepressor","termid":"PBO:0050556"}


id: _global:non_functional_homolog_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relationship between a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_functional_homolog_of","termid":"_global:non_functional_homolog_of"}


id: SO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes in frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_in_frame_polypeptide_N_terminal_elongation","synonyms":[{"name":"elongated in frame polypeptide N terminal","type":"exact"}],"termid":"SO:0001614"}


id: GO:0035208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) that are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"positively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte proliferation","synonyms":[{"name":"activation of hemocyte proliferation","type":"narrow"},{"name":"positive regulation of arthropod blood cell proliferation","type":"exact"},{"name":"stimulation of hemocyte proliferation","type":"narrow"},{"name":"up regulation of hemocyte proliferation","type":"exact"},{"name":"up-regulation of hemocyte proliferation","type":"exact"},{"name":"upregulation of hemocyte proliferation","type":"exact"}],"termid":"GO:0035208"}


id: GO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"tolerance induction in MALT","type":"exact"}],"termid":"GO:0002401"}


id: GO:0150094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by cell surface receptor-mediated endocytosis, followed by intracellular degradation.","definition_xrefs":["PMID:18289866","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"amyloid-beta clearance by cellular catabolic process","synonyms":[{"name":"amyloid-beta clearance by phagocytosis","type":"narrow"}],"termid":"GO:0150094"}


id: PBO:0038313
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_name","termid":"PBO:0038313"}


id: PBO:0064669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 4","termid":"PBO:0064669"}


id: GO:1904937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a sensory neuron from one site to another.","definition_xrefs":["GOC:TermGenie","GOC:ah","PMID:18622031","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron migration","termid":"GO:1904937"}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: GO:0017007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of bilin and a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-bilin linkage","termid":"GO:0017007"}


id: GO:0033103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the type VI secretion system. Proteins secreted by this system do not require an N-terminal signal sequence.","definition_xrefs":["GOC:mlg","PMID:16432199","PMID:16763151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VI secretion system","synonyms":[{"name":"protein secretion by the T6SS","type":"exact"},{"name":"protein secretion by the type VI protein secretion system","type":"exact"},{"name":"type VI protein secretion system","type":"exact"}],"termid":"GO:0033103"}


id: PBO:0004891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, nucleoporin Rae1","termid":"PBO:0004891"}


id: PBO:0048784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 14","termid":"PBO:0048784"}


id: GO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp development. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mtg_sensu","PMID:4332228","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp development","synonyms":[{"name":"regulation of fruiting body development","type":"broad"},{"name":"regulation of fruiting body formation","type":"broad"}],"termid":"GO:0031156"}


id: PBO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, predicted co-chaperone Wos2","termid":"PBO:0002530"}


id: PR:Q9Y7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.06","synonyms":[{"name":"Spom972h-SPCC191.06","type":"exact"}],"termid":"PR:Q9Y7Q0"}


id: PBO:0040110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 1","termid":"PBO:0040110"}


id: PBO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex WD repeat protein subunit Mms1","termid":"PBO:0090311"}


id: PBO:0047949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(17)(p12)","termid":"PBO:0047949"}


id: PBO:0043259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 17","termid":"PBO:0043259"}


id: FYPO:0003946
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115338],"is_not":false,"summary":null,"term":"FYPO:0003946"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_03596":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"delayed onset of protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"delayed onset of protein localisation to cell division site","type":"exact"},{"name":"delayed onset of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"delayed onset of protein recruitment to cell division site","type":"related"},{"name":"delayed protein localization to cell division site","type":"exact"}],"termid":"FYPO:0003946","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0003946":null}}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_04649","SJAG_01269","SJAG_02352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110799],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[98628,93509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


