# terms

id: GO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the centrosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to centrosome","synonyms":[{"name":"protein localisation to centrosome","type":"exact"}],"termid":"GO:0071539"}


id: GO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 36 of the histone.","definition_xrefs":["GOC:sart","PMID:19061644"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 demethylation (obsolete GO:0070544)","synonyms":[{"name":"H3K36 demethylation","type":"related"}],"termid":"GO:0070544"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GOC:bf","PMID:19703902","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: PBO:0028340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclin-dependent_protein_kinase_activity","termid":"PBO:0028340"}


id: PR:C6Y4D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor C16C4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.22","secondary_identifiers":["UniProtKB:C6Y4D0"],"synonyms":[{"name":"Spom972h-POLE4","type":"exact"}],"termid":"PR:C6Y4D0"}


id: PBO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level","termid":"PBO:0030251"}


id: PBO:0029479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sterol_ester_level","termid":"PBO:0029479"}


id: FYPO:0003866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell when the cell is in G0 phase is higher than normal. Total protein or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during G0","synonyms":[{"name":"increased protein accumulation during G0","type":"related"},{"name":"increased protein level during cell quiescence","type":"exact"},{"name":"increased protein level during quiescence","type":"exact"}],"termid":"FYPO:0003866"}


id: PBO:0068986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 230, pseudogene","termid":"PBO:0068986"}


id: GO:0098522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory neuromuscular junction","termid":"GO:0098520"},{"relation_name":"is_a","term_name":"neuromuscular junction of myotube","termid":"GO:0098523"},{"relation_name":"is_a","term_name":"cholinergic synapse","termid":"GO:0098981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of skeletal muscle fiber","termid":"GO:0098522"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: PR:Q9P7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.16c","synonyms":[{"name":"Spom972h-SPCC24B10.16c","type":"exact"}],"termid":"PR:Q9P7J0"}


id: PBO:0072344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 30","termid":"PBO:0072344"}


id: GO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.","definition_xrefs":["PMID:18374194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl carboxylase activity","secondary_identifiers":["Reactome:R-HSA-159752","Reactome:R-HSA-159795","RHEA:45140","Reactome:R-HSA-159761","Reactome:R-HSA-163810","EC:4.1.1.90","Reactome:R-HSA-9673231","Reactome:R-HSA-159803","Reactome:R-HSA-6807214","Reactome:R-HSA-159826","Reactome:R-HSA-163820","Reactome:R-HSA-159819"],"termid":"GO:0008488"}


id: PBO:0078391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-6","termid":"PBO:0078391"}


id: PBO:0048715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 1","termid":"PBO:0048715"}


id: _global:existence_starts_and_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during","termid":"_global:existence_ends_during"},{"relation_name":"is_a","term_name":"existence_starts_during","termid":"_global:existence_starts_during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_and_ends_during","secondary_identifiers":["RO:0002491"],"synonyms":[{"name":"exists during","type":"exact"}],"termid":"_global:existence_starts_and_ends_during"}


id: GO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the stereospecific transfer of asparagine or glutamine across a biological membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete asparagine/glutamine permease activity (obsolete GO:0015331)","synonyms":[{"name":"asparagine/glutamine permease activity","type":"exact"}],"termid":"GO:0015331"}


id: GO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"pole plasm RNA localization","secondary_identifiers":["GO:0048116"],"synonyms":[{"name":"establishment and maintenance of pole plasm RNA localization","type":"exact"},{"name":"oocyte pole plasm RNA localization","type":"exact"},{"name":"pole plasm RNA localisation","type":"exact"}],"termid":"GO:0007316"}


id: PBO:0084082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine deaminase; a catabolic enzyme of the guanine salvage pathway producing xanthine and ammonia from guanine; activity is low in exponentially-growing cultures but expression is increased in post-diauxic and stationary-phase cultures","termid":"PBO:0084082"}


id: GO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["RESID:AA0247","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"keratan sulfate biosynthetic process","synonyms":[{"name":"keratan sulfate anabolism","type":"exact"},{"name":"keratan sulfate biosynthesis","type":"exact"},{"name":"keratan sulfate formation","type":"exact"},{"name":"keratan sulfate synthesis","type":"exact"},{"name":"keratan sulphate biosynthesis","type":"exact"},{"name":"keratan sulphate biosynthetic process","type":"exact"}],"termid":"GO:0018146"}


id: PBO:0044905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 2","termid":"PBO:0044905"}


id: GO:0004170
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94675],"is_not":false,"summary":null,"term":"GO:0004170"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dUTP + H2O = dUMP + H+ + diphosphate.","definition_xrefs":["RHEA:10248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0047429","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dUTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02100","EC:3.6.1.23","MetaCyc:DUTP-PYROP-RXN","Reactome:R-HSA-73666"],"synonyms":[{"name":"dUTP nucleotidohydrolase activity","type":"related"},{"name":"dUTP pyrophosphatase activity","type":"exact"},{"name":"dUTPase activity","type":"related"},{"name":"deoxyuridine-triphosphatase activity","type":"related"},{"name":"desoxyuridine 5'-triphosphatase activity","type":"related"},{"name":"desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"related"}],"termid":"GO:0004170","terms_by_termid":{"GO:0004170":null}}


id: PBO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase","termid":"PBO:0003272"}


id: PBO:0056375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 2","termid":"PBO:0056375"}


id: PBO:0030569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_glutamine_level","termid":"PBO:0030569"}


id: PBO:0083414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0","termid":"PBO:0083414"}


id: PBO:0072628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 3","termid":"PBO:0072628"}


id: PATO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pigmentation","synonyms":[{"name":"hyperpigmented","type":"exact"}],"termid":"PATO:0002250"}


id: PR:Q10481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19338:SF0","OMA:SCHPO01858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.09c","secondary_identifiers":["UniProtKB:Q10481"],"synonyms":[{"name":"Spom972h-TIMM13","type":"exact"}],"termid":"PR:Q10481"}


id: GO:0044878
data:
  {"annotated_genes":["SJAG_04280","SJAG_04597","SJAG_00082","SJAG_02266","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85465,89995,96232,97152,111998],"is_not":false,"summary":null,"term":"GO:0044878"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that detects a defect in cytokinesis and prevents further rounds of nuclear division until cytokinesis is completed.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle","PMID:17538026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02266":null,"SJAG_03073":null,"SJAG_04280":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitotic cytokinesis checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903820"],"synonyms":[{"name":"cytokinesis after mitosis checkpoint","type":"related"},{"name":"defective cytokinesis checkpoint","type":"related"},{"name":"mitotic cytokinesis checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signaling pathway involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling cascade involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling pathway involved in mitotic cytokinesis checkpoint","type":"related"}],"termid":"GO:0044878","terms_by_termid":{"GO:0044878":null}}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: PBO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D","termid":"PBO:0043785"}


id: PBO:0082579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphate cytidylyltransferase; a rate-determining enzyme of the CDP-choline pathway for phosphatidylcholine synthesis, inhibited by Sec14p, activated upon lipid-binding; controls phosphatidylcholine homeostasis; contains an element within the regulatory domain involved in both silencing and activation of enzymatic activity","termid":"PBO:0082579"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["UniProtKB:Q09695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: GO:0097683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The anterior most point of a dinoflagellate epicone.","definition_xrefs":["ISBN:0632009152","GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apex","synonyms":[{"name":"apex","type":"broad"}],"termid":"GO:0097683"}


id: GO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is secreted into extracellular space and found in mucosal areas or other tissues or circulating in the blood or lymph. In its canonical form, a circulating immunoglobulin complex is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms of are polymers of the basic structure and contain additional components such as J-chain and the secretory component.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"immunoglobulin complex, circulating","secondary_identifiers":["Wikipedia:Antibody"],"synonyms":[{"name":"antibody","type":"exact"}],"termid":"GO:0042571"}


id: PBO:0016928
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0016928"}


id: GO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylglucosamine from one side of a membrane to the other. The D isomer of N-acetylglucosamine is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"N-acetylglucosamine transmembrane transporter activity","secondary_identifiers":["GO:0015580"],"synonyms":[{"name":"D-GlcNAc transmembrane transporter activity","type":"exact"},{"name":"N-Acetyl-D-glucosamine permease","type":"related"},{"name":"N-acetyl-D-glucosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylchitosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylglucosamine permease activity","type":"related"}],"termid":"GO:0015572"}


id: FYPO:0005778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of one or more chromosomes is abnormal during a cellular response to acetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000002","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal chromosome morphology during cellular response to acetaldehyde","synonyms":[{"name":"abnormal chromosome morphology during cellular response to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology during cellular response to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005778"}


id: PBO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 2","termid":"PBO:0046702"}


id: PBO:0085726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the inositol acylation of GlcN-PI; the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI) forms glucosaminyl(acyl)phosphatidylinositol (GlcN(acyl)PI), an intermediate in the biosynthesis of glycosylphosphatidylinositol (GPI) anchors","termid":"PBO:0085726"}


id: PBO:0086535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps dubious ORF YLR123C","termid":"PBO:0086535"}


id: GO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD86, a CD marker that occurs on antigen presenting cells that provides co-stimulatory signals necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD86 biosynthetic process","synonyms":[{"name":"CD86 biosynthesis","type":"exact"},{"name":"CD86 formation","type":"exact"},{"name":"CD86 synthesis","type":"exact"},{"name":"CD86 anabolism","type":"exact"}],"termid":"GO:0035781"}


id: GO:0061399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a cobalt ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion (obsolete GO:0061399)","termid":"GO:0061399"}


id: GO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Chromatin that is part of a sex chromosome.","definition_xrefs":["ISBN:0198506732","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"sex chromatin","termid":"GO:0001739"}


id: PBO:0079582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 3","termid":"PBO:0079582"}


id: PBO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterodimer","termid":"PBO:0002435"}


id: PBO:0086355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purine nucleoside phosphorylase; specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway","termid":"PBO:0086355"}


id: PBO:0076843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF2 interacting protein pseudogene 1","termid":"PBO:0076843"}


id: FYPO:0004809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["GO:0070829","PomBase:mah","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"reduced duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0004809"}


id: PR:Q10474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.02c","synonyms":[{"name":"AASD-PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys7","type":"exact"}],"termid":"PR:Q10474"}


id: PBO:0081073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 5","termid":"PBO:0081073"}


id: PBO:0063945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53-induced noncoding RNA","termid":"PBO:0063945"}


id: GO:0071835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that regulates the union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:jh","GOC:elh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0000747","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mating pheromone secretion involved in regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071832"],"synonyms":[{"name":"mating pheromone secretion involved in regulation of conjugation","type":"related"},{"name":"mating-type pheromone secretion involved in conjugation","type":"exact"},{"name":"peptide pheromone export involved in regulation of conjugation","type":"broad"}],"termid":"GO:0071835"}


id: PBO:0079003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 3-1","termid":"PBO:0079003"}


id: PBO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png2","termid":"PBO:0003480"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: GO:0031440
data:
  {"annotated_genes":["SJAG_02691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88154],"is_not":false,"summary":null,"term":"GO:0031440"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031440","terms_by_termid":{"GO:0031440":null}}


id: PBO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Cdk9","termid":"PBO:0000716"}


id: PR:O13621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anoctamin-10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C691.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.05c","secondary_identifiers":["UniProtKB:O13621"],"synonyms":[{"name":"Spom972h-ANO10","type":"exact"}],"termid":"PR:O13621"}


id: PBO:0073206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3F","termid":"PBO:0073206"}


id: PBO:0031110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress","termid":"PBO:0031110"}


id: PBO:0086675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-2; YLR154C-H has a paralog, YLR157C-C, that arose from a segmental duplication","termid":"PBO:0086675"}


id: PBO:0065943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 3","termid":"PBO:0065943"}


id: PBO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 4","termid":"PBO:0060935"}


id: GO:1905712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phosphatidylethanolamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:1657995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to phosphatidylethanolamine","termid":"GO:1905711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phosphatidylethanolamine","synonyms":[{"name":"cellular response to PE","type":"exact"},{"name":"cellular response to PtdEtn","type":"exact"},{"name":"cellular response to phosphatidyl(amino)ethanols","type":"exact"},{"name":"cellular response to phosphatidylethanolamines","type":"exact"}],"termid":"GO:1905712"}


id: PBO:0067357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 455, pseudogene","termid":"PBO:0067357"}


id: PBO:0085271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal delta3,delta2-enoyl-CoA isomerase; hexameric protein that converts 3-hexenoyl-CoA to trans-2-hexenoyl-CoA, essential for the beta-oxidation of unsaturated fatty acids, oleate-induced; ECI1 has a paralog, DCI1, that arose from the whole genome duplication","termid":"PBO:0085271"}


id: PBO:0055246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2673","termid":"PBO:0055246"}


id: PBO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCMAP divergent transcript","termid":"PBO:0060637"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: PBO:0067222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 291, pseudogene","termid":"PBO:0067222"}


id: GO:0097445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered.","definition_xrefs":["NIF_Subcellular:sao494258938","PMID:15381754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone dense projection","synonyms":[{"name":"active zone dense projection","type":"exact"},{"name":"pre-synaptic active zone dense projection","type":"exact"}],"termid":"GO:0097445"}


id: PBO:0065662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRK antisense RNA 1","termid":"PBO:0065662"}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: PBO:0064628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPAN-P2RY11 readthrough","termid":"PBO:0064628"}


id: PBO:0087759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ubiqunol-cytochrome c oxidoreductase complex; this complex comprises part of the mitochondrial respiratory chain; members include Cobp, Rip1p, Cyt1p, Cor1p, Qcr2p, Qcr6p, Qcr7p, Qcr8p, Qcr9p, and Qcr10p and comprises part of the mitochondrial respiratory chain","termid":"PBO:0087759"}


id: PBO:0010008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation RNA helicase Sum3","termid":"PBO:0010008"}


id: GO:0061009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common bile duct development","synonyms":[{"name":"CBD development","type":"exact"},{"name":"EHBD development","type":"broad"},{"name":"bile duct development","type":"exact"},{"name":"extrahepatic bile duct development","type":"broad"}],"termid":"GO:0061009"}


id: FYPO:0007071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase a.","definition_xrefs":["PMID:31427431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase A","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase A","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase A","type":"exact"},{"name":"increased rate of spindle elongation during anaphase A of mitosis","type":"exact"}],"termid":"FYPO:0007071"}


id: PBO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC intracellular cholesterol transporter 2","termid":"PBO:0061300"}


id: GO:0006667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["PMID:29165427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sphinganine metabolic process","synonyms":[{"name":"dihydrosphingosine metabolic process","type":"exact"},{"name":"dihydrosphingosine metabolism","type":"exact"},{"name":"sphinganine metabolism","type":"exact"}],"termid":"GO:0006667"}


id: GO:0033350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose biosynthetic process","termid":"GO:0033348"},{"relation_name":"is_a","term_name":"apiose metabolic process","termid":"GO:0033349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"apiose biosynthetic process","synonyms":[{"name":"apiose anabolism","type":"exact"},{"name":"apiose biosynthesis","type":"exact"},{"name":"apiose formation","type":"exact"},{"name":"apiose synthesis","type":"exact"}],"termid":"GO:0033350"}


id: PBO:0045887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1 pseudogene 1","termid":"PBO:0045887"}


id: GO:0021987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex development","synonyms":[{"name":"corticogenesis","type":"narrow"},{"name":"neocortex development","type":"related"}],"termid":"GO:0021987"}


id: PBO:0077913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 4","termid":"PBO:0077913"}


id: GO:0019240
data:
  {"annotated_genes":["SJAG_00635","SJAG_00964","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88989,93835,102325],"is_not":false,"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrulline metabolic process","termid":"GO:0000052"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00635":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"citrulline biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CITRULBIO-PWY"],"synonyms":[{"name":"citrulline anabolism","type":"exact"},{"name":"citrulline biosynthesis","type":"exact"},{"name":"citrulline formation","type":"exact"},{"name":"citrulline synthesis","type":"exact"}],"termid":"GO:0019240","terms_by_termid":{"GO:0019240":null}}


id: MOD:01784
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N,N-trimethyl-L-serine.","definition_xrefs":["RESID:AA0535","PubMed:20668449","PubMed:3979397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-serine","synonyms":[{"name":"(1S)-1-carboxy-2-hydroxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-2-hydroxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-trimethylammonio-3-hydroxypropanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylserine","type":"exact"},{"name":"N,N,N-trimethyl-L-serine","type":"exact"},{"name":"N,N,N-trimethylserine cation","type":"exact"},{"name":"N,N,N-trimethylserinium","type":"exact"}],"termid":"MOD:01784"}


id: GO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid as found within host cells with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell plastid","termid":"GO:0033651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast","termid":"GO:0033652"}


id: GO:0031508
data:
  {"annotated_genes":["SJAG_02778","SJAG_03356","SJAG_02846","SJAG_00414","SJAG_00058","SJAG_03193","SJAG_04574","SJAG_02621","SJAG_01075","SJAG_03042","SJAG_00087","SJAG_02594","SJAG_04039","SJAG_03982","SJAG_01599","SJAG_04253","SJAG_00302","SJAG_00961","SJAG_00934","SJAG_01675","SJAG_03916","SJAG_00335","SJAG_01008","SJAG_04030","SJAG_03689","SJAG_04141","SJAG_03844","SJAG_02409","SJAG_02725","SJAG_04061","SJAG_02119","SJAG_01579","SJAG_01540","SJAG_03543","SJAG_00756","SJAG_03624","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85524,86754,87574,89020,92369,93927,97742,97743,97744,98517,99862,104008,106360,108010,108113,108536,108537,108538,109237,110393],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[92834,95996],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[111398,106362,84286,110274,110544,90956,94816,102361,114084,114806,89674,95240,106526,86756,92372,107086,113975,109635,111980,108114,113694,84225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The compaction of chromatin located adjacent to the CENP-A rich centromere 'central core' and characterized by methylation of histone H3K9, into heterochromatin, resulting in the repression of transcription at pericentric DNA.","definition_xrefs":["PMID:20206496","PMID:14612388","GOC:mah","PMID:22729156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01075":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01675":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03543":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030702","GO:1990141"],"synonyms":[{"name":"centric heterochromatin formation","type":"related"},{"name":"centromere chromatin silencing","type":"exact"},{"name":"centromeric heterochromatin biosynthesis","type":"exact"},{"name":"centromeric heterochromatin formation","type":"exact"},{"name":"centromeric silencing","type":"exact"},{"name":"chromatin silencing at centromere","type":"exact"},{"name":"chromatin silencing at centromere outer repeat region","type":"narrow"},{"name":"chromatin silencing at pericentric region","type":"related"},{"name":"heterochromatic silencing at centromere","type":"exact"},{"name":"pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0031508","terms_by_termid":{"GO:0031508":null,"GO:0090052":null,"GO:0140727":null}}


id: GO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"}


id: GO:0015959
data:
  {"annotated_genes":["SJAG_04870","SJAG_01352","SJAG_04169","SJAG_04939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84163],"is_not":false,"summary":null,"term":"GO:0015959"},{"annotations":[84161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[92647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"},{"annotations":[113092,107333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_04169":null,"SJAG_04870":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"diadenosine polyphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate metabolism","type":"exact"}],"termid":"GO:0015959","terms_by_termid":{"GO:0015959":null,"GO:0015964":null,"GO:0015966":null,"GO:1901907":null,"GO:1901909":null}}


id: GO:0046507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + UDP-D-glucose = H2O + UDP-6-sulfoquinovose.","definition_xrefs":["EC:3.13.1.1","RHEA:13197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-sulfur bonds","termid":"GO:0046508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDPsulfoquinovose synthase activity","secondary_identifiers":["KEGG_REACTION:R05775","MetaCyc:RXN-1223"],"synonyms":[{"name":"UDP-6-sulfo-6-deoxyglucose sulfohydrolase activity","type":"related"},{"name":"UDP-sulfoquinovose synthase activity","type":"related"},{"name":"UDPsulphoquinovose synthase activity","type":"exact"},{"name":"sulfite:UDP-glucose sulfotransferase activity","type":"exact"}],"termid":"GO:0046507"}


id: PBO:0078805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 22-1","termid":"PBO:0078805"}


id: PATO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastic","termid":"PATO:0001171"}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: PR:000044588
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the sid4 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom-sid4","type":"exact"}],"termid":"PR:000044588"}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.42-RXN","KEGG_REACTION:R02708"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: PBO:0048155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 1","termid":"PBO:0048155"}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: PBO:0003794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2 (predicted)","termid":"PBO:0003794"}


id: PBO:0011149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ASCC1 ortholog, implicated in transcriptional regulation (predicted)","termid":"PBO:0011149"}


id: GO:0031116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization or depolymerization","termid":"GO:0031112"},{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0000226","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"positive regulation of microtubule polymerization","synonyms":[{"name":"activation of microtubule polymerization","type":"narrow"},{"name":"stimulation of microtubule polymerization","type":"narrow"},{"name":"up regulation of microtubule polymerization","type":"exact"},{"name":"up-regulation of microtubule polymerization","type":"exact"},{"name":"upregulation of microtubule polymerization","type":"exact"}],"termid":"GO:0031116"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: PBO:0060176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1","termid":"PBO:0060176"}


id: GO:2000105
data:
  {"annotated_genes":["SJAG_03720","SJAG_03160","SJAG_03090","SJAG_02074","SJAG_03695","SJAG_03438","SJAG_03048","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113271,99073,107937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98101,84516,112237,102430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[100895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010571"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA replication","termid":"GO:0045740"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"positively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03090":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000105","terms_by_termid":{"GO:0010571":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-25","termid":"PBO:0051440"}


id: PBO:0060477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 2","termid":"PBO:0060477"}


id: GO:1901771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["PMID:7601857","GOC:yaf","UniPathway:UPA00054","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: PBO:0078011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 1 (non-functional)","termid":"PBO:0078011"}


id: PBO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2","termid":"PBO:0047344"}


id: GO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube formation","secondary_identifiers":["Wikipedia:Neurulation","GO:0001679"],"synonyms":[{"name":"neural tube morphogenesis","type":"exact"},{"name":"neurulation","type":"exact"}],"termid":"GO:0001841"}


id: PBO:0060620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK adaptor protein 1","termid":"PBO:0060620"}


id: PBO:0056000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056000"}


id: PBO:0067123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 168, pseudogene","termid":"PBO:0067123"}


id: FYPO:0006276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyorrhexis, the nuclear fragmentation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:18653539","GO:0097194","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased karyorrhexis during stationary phase","synonyms":[{"name":"fragmented nuclear envelope during stationary phase entry","type":"related"},{"name":"increased apoptotic nuclear fragmentation during stationary phase","type":"exact"}],"termid":"FYPO:0006276"}


id: PBO:0005862
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.2","termid":"PBO:0005862"}


id: PBO:0110493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 38","termid":"PBO:0110493"}


id: GO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck.","definition_xrefs":["ISBN:0198504888","NIF_Subcellular:sao1145756102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron spine","synonyms":[{"name":"spine","type":"broad"}],"termid":"GO:0044309"}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: GO:0097598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small amount of cytoplasm surrounded by a cell membrane that is generally retained in spermatozoa after spermiogenesis, when the majority of the cytoplasm is phagocytosed by Sertoli cells to produce what are called residual bodies. Initially, the droplet is located at the neck just behind the head of an elongated spermatid. During epididymal transit, the cytoplasmic droplet migrates caudally to the annulus at the end of the midpiece; the exact position and time varies by species. The cytoplasmic droplet consists of lipids, lipoproteins, RNAs, a variety of hydrolytic enzymes, receptors, ion channels, and Golgi-derived vesicles. The droplet may be involved in regulatory volume loss (RVD) at ejaculation, and in most species, though not in humans, the cytoplasmic droplet is lost at ejaculation. Note that the cytoplasmic droplet is distinct from 'excessive residual cytoplasm' that sometimes remains in epididymal spermatozoa, particularly when spermiogenesis has been disrupted.","definition_xrefs":["PMID:12672117","PMID:21076437","GOC:krc","PMID:23159014","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sperm cytoplasmic droplet","synonyms":[{"name":"sperm residual cytoplasm","type":"exact"}],"termid":"GO:0097598"}


id: PBO:0049004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 2","termid":"PBO:0049004"}


id: GO:0120341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 2 (RS2) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"radial spoke base 2","termid":"GO:0120341"}


id: PBO:0073773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 7","termid":"PBO:0073773"}


id: GO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the plasma membrane of the sperm with the outer acrosomal membrane.","definition_xrefs":["GOC:dph","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fusion involved in acrosome reaction","synonyms":[{"name":"membrane fusion involved in the acrosomal reaction","type":"exact"}],"termid":"GO:0002078"}


id: PBO:0040717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7C","termid":"PBO:0040717"}


id: PBO:0027927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone_and_nitrogen_starvation","termid":"PBO:0027927"}


id: PBO:0041861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 7","termid":"PBO:0041861"}


id: PBO:0069186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 440, pseudogene","termid":"PBO:0069186"}


id: GO:0039660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a virion.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of virion","synonyms":[{"name":"viral matrix protein","type":"narrow"}],"termid":"GO:0039660"}


id: PATO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being supported by a peduncle or stalk.","definition_xrefs":["PATOC:GV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedunculate","termid":"PATO:0002388"}


id: GO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-G subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-G specific inhibitory MHC class Ib receptor activity","termid":"GO:0062083"}


id: GO:1904669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ATP out of a cell or organelle.","definition_xrefs":["PMID:24286344","GO_REF:0000074","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ATP export","synonyms":[{"name":"ATP efflux","type":"related"}],"termid":"GO:1904669"}


id: PBO:0054145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1512","termid":"PBO:0054145"}


id: PBO:0039744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L6","termid":"PBO:0039744"}


id: GO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-chloro-4-carboxymethylenebut-2-en-1,4-olide = trans-2-chloro-4-carboxymethylenebut-2-en-1,4-olide.","definition_xrefs":["RHEA:10924","EC:5.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide isomerase activity","secondary_identifiers":["MetaCyc:5.2.1.10-RXN","UM-BBD_reactionID:r0278","GO:0018840","KEGG_REACTION:R04576"],"synonyms":[{"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide cis-trans-isomerase activity","type":"related"},{"name":"2-chlorocarboxymethylenebutenolide isomerase activity","type":"related"},{"name":"chlorodienelactone isomerase activity","type":"related"}],"termid":"GO:0047466"}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: GO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.","definition_xrefs":["EC:2.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0003674","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.77-RXN","Reactome:R-HSA-5676966","RHEA:12705"],"synonyms":[{"name":"D-aspartyl/L-isoaspartyl methyltransferase activity","type":"related"},{"name":"L-aspartyl/L-isoaspartyl protein methyltransferase activity","type":"related"},{"name":"L-isoaspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"L-isoaspartyl/D-aspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein (D-aspartate) methyltransferase activity","type":"related"},{"name":"protein D-aspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartyl methyltransferase activity","type":"related"},{"name":"protein O-methyltransferase (L-isoaspartate)","type":"related"},{"name":"protein beta-aspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate(D-aspartate) O-methyltransferase activity","type":"related"},{"name":"protein-beta-aspartate O-methyltransferase activity","type":"related"}],"termid":"GO:0004719"}


id: PBO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 37","termid":"PBO:0072160"}


id: GO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An envelope that surrounds a bacterial cell and includes the cytoplasmic membrane and everything external, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:ds","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell envelope","secondary_identifiers":["Wikipedia:Cell_envelope"],"termid":"GO:0030313"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: PBO:0042773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 83","termid":"PBO:0042773"}


id: PBO:0017975
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SKB1","termid":"PBO:0017975"}


id: PBO:0083871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; required for turnover of histone H3 variant Cse4p","termid":"PBO:0083871"}


id: GO:0090240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4 acetylation (obsolete GO:0090240)","termid":"GO:0090240"}


id: PBO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 6","termid":"PBO:0070471"}


id: SO:1000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000186 sequence_variant_causing_cryptic_splice_donor_activation (obsolete SO:1000186)","synonyms":[{"name":"sequence variant causing cryptic splice donor activation","type":"exact"}],"termid":"SO:1000186"}


id: PBO:0049828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 3","termid":"PBO:0049828"}


id: GO:0110045
data:
  {"annotated_genes":["SJAG_02404","SJAG_03048","SJAG_01311","SJAG_04813","SJAG_02723","SJAG_00457","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98090,100213,101612,101770,102458,105118,114360],"is_not":false,"summary":null,"term":"GO:0110045"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:17674143","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"negatively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110045","terms_by_termid":{"GO:0110045":null}}


id: GO:1905891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["PMID:21803450","GO_REF:0000058","GOC:bc","GOC:TermGenie","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to thapsigargin (obsolete GO:1905891)","termid":"GO:1905891"}


id: PR:O43067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC6B1.03c gene.","definition_xrefs":["UniProtKB:O43067","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B1.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.03c","synonyms":[{"name":"Spom972h-SPBC6B1.03c","type":"exact"}],"termid":"PR:O43067"}


id: PBO:0043270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member A","termid":"PBO:0043270"}


id: PBO:0067050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 70, pseudogene","termid":"PBO:0067050"}


id: SO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the nucleus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_localization_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_localization_signal"],"synonyms":[{"name":"NLS","type":"exact"}],"termid":"SO:0001528"}


id: GO:1903297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of hypoxia-induced apoptosis","type":"related"},{"name":"regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"}],"termid":"GO:1903297"}


id: PBO:0002954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein","termid":"PBO:0002954"}


id: GO:0106300
data:
  {"annotated_genes":["SJAG_02223","SJAG_00406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93979,101894],"is_not":false,"summary":null,"term":"GO:0106300"}]},"cv_name":"biological_process","definition":"The removal of covalent cross-link between DNA and a protein.","definition_xrefs":["PMID:31921408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00406":null,"SJAG_02223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of protein-DNA covalent cross-linking","type":"exact"}],"termid":"GO:0106300","terms_by_termid":{"GO:0106300":null}}


id: GO:0031624
data:
  {"annotated_genes":["SJAG_00435","SJAG_01533","SJAG_00033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73309,73351,76061],"is_not":false,"summary":null,"term":"GO:0031624"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin conjugating enzyme, any of the E2 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme binding","termid":"GO:0044390"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00435":null,"SJAG_01533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031624","terms_by_termid":{"GO:0031624":null}}


id: PBO:0086177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the nuclear import and biogenesis of RNA pol II; conflicting evidence on whether null mutant is viable with elongated buds, or inviable; interacts with Rpb2, Rpb3, Nup116p, Nup100p and components of the R2TP complex (Rvb1p, Rvb2p, Pih1p); similar to human TMCO7 gene","termid":"PBO:0086177"}


id: PBO:0087393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S/T protein kinase; regulates polarized exocytosis and the Ire1p-mediated unfolded protein response; regulates HAC1 mRNA translocation, splicing and translation with KIN2 during ER stress; direct phosphorylation of the substrate Sec9p (S190) is enhanced by prior substrate priming (S192); localizes to the cytoplasmic face of the plasma membrane; activation loop phosphorylation (T302) required for full kinase activity; orthologous to MARK/PAR-1, AMP-activated protein kinase (AMPK) family members","termid":"PBO:0087393"}


id: GO:0102625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cirsimaritin + S-adenosyl-L-methionine = salvigenin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"cirsimaritin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15530"],"termid":"GO:0102625"}


id: PBO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf2","termid":"PBO:0002303"}


id: GO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemoglobin biosynthetic process","synonyms":[{"name":"down regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"down-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"downregulation of hemoglobin biosynthetic process","type":"exact"},{"name":"inhibition of hemoglobin biosynthetic process","type":"narrow"},{"name":"negative regulation of haemoglobin biosynthesis","type":"exact"},{"name":"negative regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"negative regulation of hemoglobin anabolism","type":"exact"},{"name":"negative regulation of hemoglobin biosynthesis","type":"exact"},{"name":"negative regulation of hemoglobin formation","type":"exact"},{"name":"negative regulation of hemoglobin synthesis","type":"exact"}],"termid":"GO:0046986"}


id: PBO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Sfh1","termid":"PBO:0005318"}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","PMID:15157725","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: PBO:0074983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-25","termid":"PBO:0074983"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:19630807","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: GO:1905352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ciliary necklace.","definition_xrefs":["PMID:20399632","GO_REF:0000079","GOC:cilia","GOC:TermGenie","PMID:6409906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ciliary necklace assembly","synonyms":[{"name":"ciliary necklace formation","type":"exact"},{"name":"cilium necklace assembly","type":"exact"},{"name":"cilial necklace assembly","type":"exact"},{"name":"cilial necklace formation","type":"exact"},{"name":"cilium necklace formation","type":"exact"}],"termid":"GO:1905352"}


id: PBO:0110974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog, implicated in rRNA transcription or rRNA processing","termid":"PBO:0110974"}


id: FYPO:0001655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histidine import","synonyms":[{"name":"abnormal L-histidine import","type":"exact"},{"name":"abnormal L-histidine import across plasma membrane","type":"exact"},{"name":"abnormal histidine import during mitotic cell cycle","type":"related"},{"name":"abnormal histidine import during vegetative growth","type":"exact"},{"name":"abnormal histidine import into cell","type":"exact"},{"name":"abnormal histidine uptake","type":"exact"}],"termid":"FYPO:0001655"}


id: GO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian regulation of heart rate","termid":"GO:0003053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of heart rate","type":"exact"},{"name":"circadian regulation of heart contraction rate by the suprachiasmatic nucleus","type":"related"},{"name":"master pacemaker clock regulation of heart rate","type":"exact"}],"termid":"GO:0003055"}


id: PBO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)","termid":"PBO:0000420"}


id: PBO:0002715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase (predicted)","termid":"PBO:0002715"}


id: GO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + ATP = phosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["EC:2.7.7.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP adenylyltransferase activity","secondary_identifiers":["RHEA:16577","MetaCyc:ATP-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"ADP:ATP adenylyltransferase activity","type":"exact"},{"name":"AP-4-A phosphorylase activity","type":"related"},{"name":"adenine triphosphate adenylyltransferase activity","type":"related"},{"name":"bis(5'-nucleosyl)-tetraphosphate phosphorylase (NDP-forming) activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate alphabeta-phosphorylase (ADP-forming)","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alpha-beta-phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alphabeta-phosphorylase activity","type":"related"},{"name":"dinucleoside oligophosphate alphabeta-phosphorylase activity","type":"related"}],"termid":"GO:0003877"}


id: GO:2000206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000206"}


id: GO:0044853
data:
  {"annotated_genes":["SJAG_03536","SJAG_04620","SJAG_04001","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83892,84799,99001,114526],"is_not":false,"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane raft that is part of the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft","termid":"GO:0045121"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044853","terms_by_termid":{"GO:0044853":null}}


id: PBO:0076863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13A","termid":"PBO:0076863"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: FYPO:0002102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0002102"}


id: PBO:0066936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 238","termid":"PBO:0066936"}


id: GO:0030563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a methylase by using base complementarity to guide site-specific 2'-O-ribose methylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNA 2'-O-ribose methylation guide activity","termid":"GO:0030563"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0079977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 15","termid":"PBO:0079977"}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: GO:0016072
data:
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id: PBO:0085467
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id: PBO:0060496
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id: PBO:0040052
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id: GO:0008881
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id: PBO:0086371
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id: GO:0140434
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id: GO:0009205
data:
  {"annotated_genes":["SJAG_00685","SJAG_06621","SJAG_02796","SJAG_00915","SJAG_MIT09","SJAG_04192","SJAG_07003","SJAG_03925","SJAG_04422","SJAG_03373","SJAG_03660","SJAG_01471","SJAG_02107","SJAG_02945","SJAG_00438","SJAG_00542","SJAG_02105","SJAG_03852","SJAG_00461","SJAG_05204","SJAG_MIT15","SJAG_00836","SJAG_04048","SJAG_00605","SJAG_04334","SJAG_MIT37","SJAG_02564","SJAG_00839","SJAG_03903","SJAG_00633","SJAG_02135","SJAG_00133","SJAG_03114","SJAG_00985","SJAG_01310","SJAG_00136","SJAG_06622","SJAG_02598","SJAG_01298","SJAG_04122","SJAG_04849","SJAG_03828","SJAG_02369","SJAG_02038","SJAG_02009","SJAG_04495","SJAG_00027","SJAG_02887","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93794,92251,94599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[101624,105254,104778,93938,105248,104780,99408,101236,105251,105252,100237,104777,104781,105249,99140,101237,90622,93657,101238,104775,104776,90118,105250,101625,104779,112353,105253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107464,93853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[104118,97966,95759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[110980,85154],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[67191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[97538,99419,111838,98776,100772,99448,104636,88412,88845,115058,90441,84588,103643,103739,115049,89452,115054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[113996],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009205","terms_by_termid":{"GO:0006096":null,"GO:0006183":null,"GO:0015986":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: PBO:0055070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2487","termid":"PBO:0055070"}


id: PBO:0062806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 6","termid":"PBO:0062806"}


id: GO:0015044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced rubredoxin + NAD+ = oxidized rubredoxin + NADH + H+.","definition_xrefs":["RHEA:18597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)+ reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rubredoxin-NAD+ reductase activity","secondary_identifiers":["MetaCyc:RUBREDOXIN--NAD+-REDUCTASE-RXN","EC:1.18.1.1"],"synonyms":[{"name":"DPNH-rubredoxin reductase activity","type":"related"},{"name":"NADH--rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH--rubredoxin reductase activity","type":"related"},{"name":"NADH:rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH:rubredoxin reductase activity","type":"exact"},{"name":"dihydronicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"rubredoxin--NAD reductase activity","type":"related"},{"name":"rubredoxin--nicotinamide adenine dinucleotide reductase activity","type":"related"},{"name":"rubredoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0015044"}


id: PBO:0027331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rRNA_transcription","termid":"PBO:0027331"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: GO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the acetylation of residue Lys609 of the enzyme acetyl-CoA synthetase, using acetyl-CoA as substrate.","definition_xrefs":["PMID:15236963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acetyl-CoA synthetase acetyltransferase activity","synonyms":[{"name":"Pat","type":"related"},{"name":"Pat enzyme","type":"exact"},{"name":"protein acetyltransferase activity","type":"broad"}],"termid":"GO:0043894"}


id: PBO:0002694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor Sec24/Sfb2 subunit","termid":"PBO:0002694"}


id: PBO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic liver disease","termid":"PBO:0005367"}


id: PBO:0032725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_with_abnormal_spindle","termid":"PBO:0032725"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: PATO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's disposition to being susceptible to damage by light.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phototoxic","termid":"PATO:0001803"}


id: PBO:0062138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 5","termid":"PBO:0062138"}


id: FYPO:0004228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to UV","synonyms":[{"name":"decreased protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ultraviolet light","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to UV","type":"exact"}],"termid":"FYPO:0004228"}


id: PR:P87297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.05c","synonyms":[{"name":"Spom972h-dad1","type":"exact"},{"name":"outer kinetochore protein dad1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87297"}


id: GO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell or a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"orexin secretion","synonyms":[{"name":"hypocretin secretion","type":"exact"}],"termid":"GO:0061584"}


id: GO:0021615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the glossopharyngeal nerve is generated and organized. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve morphogenesis","synonyms":[{"name":"CN IX morphogenesis","type":"related"}],"termid":"GO:0021615"}


id: PBO:0082684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the exomer complex; the exomer which also contains Csh6p, Bch1p, Bch2p, and Bud7, is involved in the export of select proteins, such as chitin synthase Chs3p, from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; Chs5p is the only protein with a BRCT domain that is not localized to the nucleus","termid":"PBO:0082684"}


id: GO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the cytoplasmic bridges between developing spermatogonial or oogonial cysts.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"intercellular bridge organization","termid":"GO:0043063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline ring canal formation","synonyms":[{"name":"ring canal formation","type":"broad"}],"termid":"GO:0030725"}


id: PBO:0028894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G1_phase","termid":"PBO:0028894"}


id: PBO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation","termid":"PBO:0030969"}


id: GO:0044248
data:
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id: GO:0010662
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id: PBO:0066189
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id: PR:Q92337
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id: MOD:00958
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id: PBO:0075346
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id: GO:0140535
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activity","termid":"GO:0098772"}],"gene_count":134,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00066":null,"SJAG_00071":null,"SJAG_00078":null,"SJAG_00092":null,"SJAG_00095":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00289":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00369":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00467":null,"SJAG_00526":null,"SJAG_00551":null,"SJAG_00591":null,"SJAG_00666":null,"SJAG_00686":null,"SJAG_00796":null,"SJAG_00824":null,"SJAG_00837":null,"SJAG_00864":null,"SJAG_00883":null,"SJAG_00901":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01000":null,"SJAG_01011":null,"SJAG_01048":null,"SJAG_01051":null,"SJAG_01076":null,"SJAG_01114":null,"SJAG_01121":null,"SJAG_01184":null,"SJAG_01213":null,"SJAG_01270":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01526":null,"SJAG_01597":null,"SJAG_01600":null,"SJAG_01605":null,"SJAG_01708":null,"SJAG_01746":null,"SJAG_01794":null,"SJAG_01823":null,"SJAG_02012":null,"SJAG_02026":null,"SJAG_02045":null,"SJAG_02057":null,"SJAG_02199":null,"SJAG_02202":null,"SJAG_02231":null,"SJAG_02232":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02332":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02444":null,"SJAG_02520":null,"SJAG_02539":null,"SJAG_02605":null,"SJAG_02625":null,"SJAG_02638":null,"SJAG_02765":null,"SJAG_02785":null,"SJAG_02920":null,"SJAG_02982":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03090":null,"SJAG_03153":null,"SJAG_03221":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03340":null,"SJAG_03353":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03655":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03748":null,"SJAG_03751":null,"SJAG_03754":null,"SJAG_03809":null,"SJAG_03836":null,"SJAG_03858":null,"SJAG_03936":null,"SJAG_04013":null,"SJAG_04020":null,"SJAG_04074":null,"SJAG_04140":null,"SJAG_04190":null,"SJAG_04200":null,"SJAG_04211":null,"SJAG_04284":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04460":null,"SJAG_04462":null,"SJAG_04484":null,"SJAG_04498":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04614":null,"SJAG_04615":null,"SJAG_04638":null,"SJAG_04682":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04776":null,"SJAG_04853":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_04950":null,"SJAG_04968":null,"SJAG_05017":null,"SJAG_05212":null,"SJAG_05252":null,"SJAG_05346":null,"SJAG_05694":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"molecular function activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0140677","terms_by_termid":{"GO:0001671":null,"GO:0005096":null,"GO:0008047":null,"GO:0008048":null,"GO:0008160":null,"GO:0010698":null,"GO:0010856":null,"GO:0016176":null,"GO:0016504":null,"GO:0019211":null,"GO:0019912":null,"GO:0030295":null,"GO:0030337":null,"GO:0043539":null,"GO:0044692":null,"GO:0061133":null,"GO:0061575":null,"GO:0061632":null,"GO:0072542":null,"GO:0097027":null,"GO:0098744":null,"GO:0120230":null,"GO:0140656":null,"GO:0170008":null,"GO:1990757":null}}


id: PBO:0004882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Pet191 (predicted)","termid":"PBO:0004882"}


id: PBO:0111921
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3H1 type","termid":"PBO:0111921"}


id: GO:0140693
data:
  {"annotated_genes":["SJAG_02045","SJAG_04640","SJAG_03023","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86879,88064,98648,101364],"is_not":false,"summary":null,"term":"GO:0140693"}]},"cv_name":"molecular_function","definition":"Binding and bringing together two or more macromolecules in contact, permitting those molecules to organize as a molecular condensate.","definition_xrefs":["PMID:28225081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_03023":null,"SJAG_03905":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"molecular condensate scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phase separation nucleation activity","type":"exact"},{"name":"phase separation nucleator activity","type":"exact"}],"termid":"GO:0140693","terms_by_termid":{"GO:0140693":null}}


id: PBO:0046341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 6","termid":"PBO:0046341"}


id: PBO:0111651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit, Dpy-30 domain Sdc1","termid":"PBO:0111651"}


id: PBO:0086699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; YCR101C is not an essential gene","termid":"PBO:0086699"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: FYPO:0003619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mRNA splicing, via spliceosome","synonyms":[{"name":"normal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"normal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003619"}


id: GO:0099642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retrograde axonal protein transport","synonyms":[{"name":"retrograde axon cargo transport","type":"broad"}],"termid":"GO:0099642"}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: PBO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086100"}


id: PBO:0028245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028245"}


id: PBO:0027581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027581"}


id: PBO:0082506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p","termid":"PBO:0082506"}


id: PBO:0087382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol deacetylase; component of the sterol acetylation/deacetylation cycle along with Atf2p; active both in the endoplasmic reticulum (ER) and in lipid droplets; integral membrane protein with active site in the ER lumen; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0087382"}


id: PBO:0055421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2851","termid":"PBO:0055421"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["PMID:20018852","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: PBO:0050794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 4","termid":"PBO:0050794"}


id: PBO:0065474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 12","termid":"PBO:0065474"}


id: GO:0051142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell proliferation","termid":"GO:0046641"},{"relation_name":"is_a","term_name":"positive regulation of NK T cell activation","termid":"GO:0051135"},{"relation_name":"is_a","term_name":"regulation of NK T cell proliferation","termid":"GO:0051140"},{"relation_name":"positively_regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of NK T cell proliferation","synonyms":[{"name":"activation of NK T cell proliferation","type":"narrow"},{"name":"positive regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of NK T-cell proliferation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"positive regulation of NKT cell proliferation","type":"exact"},{"name":"positive regulation of NT cell proliferation","type":"exact"},{"name":"positive regulation of natural T cell proliferation","type":"exact"},{"name":"positive regulation of natural killer T cell proliferation","type":"exact"},{"name":"stimulation of NK T cell proliferation","type":"narrow"},{"name":"up regulation of NK T cell proliferation","type":"exact"},{"name":"up-regulation of NK T cell proliferation","type":"exact"},{"name":"upregulation of NK T cell proliferation","type":"exact"}],"termid":"GO:0051142"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:rl","PMID:19708671","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: GO:0106293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + O2 = NAD + hydrogen peroxide (H2O2).","definition_xrefs":["RHEA:11264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)H oxidase H2O2-forming activity","termid":"GO:0016174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"NADH oxidase H202-forming activity","termid":"GO:0106293"}


id: PBO:0076931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor EB","termid":"PBO:0076931"}


id: GO:0033321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homomethionine metabolic process","synonyms":[{"name":"homomethionine metabolism","type":"exact"}],"termid":"GO:0033321"}


id: PBO:0081310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92","termid":"PBO:0081310"}


id: FYPO:0003073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal primary amine oxidase activity","termid":"FYPO:0003072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"},{"name":"reduced primary amine oxidase activity","type":"exact"}],"termid":"FYPO:0003073"}


id: GO:0006663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid biosynthetic process","termid":"GO:0008611"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"platelet activating factor biosynthetic process","synonyms":[{"name":"PAF biosynthesis","type":"exact"},{"name":"PAF biosynthetic process","type":"exact"},{"name":"platelet activating factor anabolism","type":"exact"},{"name":"platelet activating factor biosynthesis","type":"exact"},{"name":"platelet activating factor formation","type":"exact"},{"name":"platelet activating factor synthesis","type":"exact"}],"termid":"GO:0006663"}


id: MOD:01883
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Cys)","termid":"MOD:01883"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: GO:0006525
data:
  {"annotated_genes":["SJAG_00636","SJAG_00495","SJAG_00392","SJAG_02309","SJAG_04577","SJAG_01461","SJAG_01019","SJAG_01592","SJAG_03398","SJAG_00412","SJAG_00635","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106953,88325,107807,114382,106336,93823,102324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[99203,93834,98351,114383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[102584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[92999,109148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[93000,102585,109149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_02309":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arginine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Arginine"],"synonyms":[{"name":"arginine metabolism","type":"exact"}],"termid":"GO:0006525","terms_by_termid":{"GO:0006526":null,"GO:0010121":null,"GO:0019544":null,"GO:0019547":null,"GO:0042450":null}}


id: PBO:0068172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 479","termid":"PBO:0068172"}


id: PBO:0063182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 3","termid":"PBO:0063182"}


id: PBO:0081745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 675","termid":"PBO:0081745"}


id: PBO:0079915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein like","termid":"PBO:0079915"}


id: MOD:01349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide cysteine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01349"}


id: PBO:0078014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 4","termid":"PBO:0078014"}


id: GO:1990867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.","definition_xrefs":["PMID:10348814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gastrin","termid":"GO:1990867"}


id: PBO:0084228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Htz1p-binding component of the SWR1 complex; exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; may function as a lock that prevents removal of H2AZ from nucleosomes; required for vacuolar protein sorting","termid":"PBO:0084228"}


id: GO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage of supercoiled plasma DNA to linear DNA duplexes.","definition_xrefs":["EC:3.1.22.5"],"gene_count":0,"genotype_count":0,"name":"obsolete exodeoxyribonuclease X activity (obsolete GO:0008856)","secondary_identifiers":["MetaCyc:3.1.22.5-RXN","EC:3.1.11.-"],"synonyms":[{"name":"Escherichia coli endodeoxyribonuclease X activity","type":"narrow"},{"name":"Escherichia coli endodeoxyribonuclease activity","type":"related"},{"name":"deoxyribonuclease X activity","type":"related"}],"termid":"GO:0008856"}


id: PBO:0002797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GAp family","termid":"PBO:0002797"}


id: FYPO:0001404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the outline of a colony growing on a solid surface is not symmetrical.","definition_xrefs":["PomBase:mah","PomBase:mp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"irregular colony morphology","synonyms":[{"name":"wavy-edged colony","type":"related"}],"termid":"FYPO:0001404"}


id: _global:produced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","secondary_identifiers":["RO:0003001"],"termid":"_global:produced_by"}


id: PBO:0108510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L and NuA4 histone acetyltransferase complex ING family subunit Png1","termid":"PBO:0108510"}


id: PBO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte expressed protein","termid":"PBO:0061872"}


id: PBO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23","termid":"PBO:0071160"}


id: PBO:0064229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 2","termid":"PBO:0064229"}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["GOC:mah","BRENDA:2.3.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: PBO:0111329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome bigenesis rRNA methyltransferase Spb1","termid":"PBO:0111329"}


id: FYPO:0007821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles","synonyms":[{"name":"enlarged vacuoles","type":"exact"}],"termid":"FYPO:0007821"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: PBO:0089242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 9","termid":"PBO:0089242"}


id: GO:0040039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of a cell in a multicellular organism that, having changed its location, is required to induce normal properties in one or more cells at its new location. An example of this would be the distal tip cells of Caenorhabditis elegans.","definition_xrefs":["ISBN:0879694882","ISBN:087969307X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive cell migration","termid":"GO:0040039"}


id: PBO:0066949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 251","termid":"PBO:0066949"}


id: GO:0016929
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85744,101934],"is_not":false,"summary":null,"term":"GO:0016929"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves SUMO from a target protein to which it is conjugated.","definition_xrefs":["PMID:11031248","PMID:11265250","PMID:23746258","GOC:rn","PMID:10094048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deSUMOylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070140"],"synonyms":[{"name":"SUMO-specific isopeptidase activity","type":"exact"},{"name":"SUMO-specific protease activity","type":"exact"},{"name":"SUSP","type":"narrow"},{"name":"ULP","type":"narrow"}],"termid":"GO:0016929","terms_by_termid":{"GO:0016929":null}}


id: PBO:0086715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutation results in impaired mitochondrial respiration","termid":"PBO:0086715"}


id: PBO:0047037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member B","termid":"PBO:0047037"}


id: PBO:0069969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1264, pseudogene","termid":"PBO:0069969"}


id: PBO:0065217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 2","termid":"PBO:0065217"}


id: PBO:0011508
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis and hyperpyruvatemia","termid":"PBO:0011508"}


id: GO:0021865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic division of a radial glial cell giving rise to two new radial glial cells in the forebrain.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:16226447","GOC:dph","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete symmetric radial glial cell division in forebrain (obsolete GO:0021865)","termid":"GO:0021865"}


id: PBO:0060049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 37","termid":"PBO:0060049"}


id: MOD:01159
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively attaches a residue to murein peptidoglycan by either a pentaglycine linker peptide or a peptide-like L-alanyl-D-glutamyl-2,6-diaminopimelic acid linkage.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycanated residue","termid":"MOD:01159"}


id: GO:0061752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to long non-coding RNA molecules transcribed from subtelomeric regions in most eukaryotes. Telomeric repeat-containing RNA (TERRA) molecules consist of subtelomeric-derived sequences and G-rich telomeric repeats.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:BHF_telomere","GOC:jbu","PMID:20655916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"telomeric repeat-containing RNA binding","synonyms":[{"name":"TERRA binding","type":"exact"}],"termid":"GO:0061752"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: PBO:0029938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_curved_germ_tubes_(obsolete_FYPO:0002299)","termid":"PBO:0029938"}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: PR:Q9UTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc14 gene.","definition_xrefs":["UniProtKB:Q9UTN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.03","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc14","type":"exact"},{"name":"ubiquitin carrier protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTN8"}


id: PBO:0038726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 21","termid":"PBO:0038726"}


id: PR:Q10111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.12c","synonyms":[{"name":"Spom972h-SPAC18G6.12c","type":"exact"}],"termid":"PR:Q10111"}


id: PBO:0087610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates lysine 4 of histone H3 and is required in chromatin silencing at telomeres; contains a Dpy-30 domain that mediates interaction with Bre2p; similar to C. elegans and human DPY-30","termid":"PBO:0087610"}


id: PBO:0075314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 6","termid":"PBO:0075314"}


id: PBO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc knuckle TRAMP complex subunit Air1","termid":"PBO:0003414"}


id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: GO:0036413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline at position 26 in histone H3.","definition_xrefs":["PMID:22853951","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 citrullination (obsolete GO:0036413)","synonyms":[{"name":"histone H3 arginine 26 citrullination","type":"exact"}],"termid":"GO:0036413"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: PBO:0044948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 3","termid":"PBO:0044948"}


id: PBO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like (predicted)","termid":"PBO:0004536"}


id: PBO:0046735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 1","termid":"PBO:0046735"}


id: PBO:0069931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1224, pseudogene","termid":"PBO:0069931"}


id: PBO:0067748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 47","termid":"PBO:0067748"}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["ChEBI:35619","PubMed:11740505","RESID:AA0409","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: SO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small untranslated RNA which is induced in response to oxidative stress in Escherichia coli. Acts as a global regulator to activate or repress the expression of as many as 40 genes, including the fhlA-encoded transcriptional activator and the rpoS-encoded sigma(s) subunit of RNA polymerase. OxyS is bound by the Hfq protein, that increases the OxyS RNA interaction with its target messages.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxyS_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/OxyS_RNA"],"synonyms":[{"name":"OxyS RNA","type":"exact"}],"termid":"SO:0000384"}


id: CHEBI:49786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nickel(2+)","termid":"CHEBI:49786"}


id: GO:0018002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal glutamic acid of proteins to form the derivate acetyl-glutamic acid.","definition_xrefs":["RESID:AA0044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-glutamic acid acetylation","termid":"GO:0018002"}


id: GO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"single-subunit type RNA polymerase binding","synonyms":[{"name":"SP6-type RNA polymerase binding","type":"exact"},{"name":"T3-type RNA polymerase binding","type":"exact"},{"name":"T3/T7 type RNA polymerase binding","type":"exact"},{"name":"T7-type RNA polymerase binding","type":"exact"}],"termid":"GO:0001050"}


id: PBO:0073087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 3","termid":"PBO:0073087"}


id: PATO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasagittal orientation","termid":"PATO:0005023"}


id: GO:0019934
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96138],"is_not":false,"summary":null,"term":"GO:0019934"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGMP-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934","terms_by_termid":{"GO:0019934":null}}


id: PBO:0048970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and ankyrin repeats 1","termid":"PBO:0048970"}


id: GO:2000058
data:
  {"annotated_genes":["SJAG_00052","SJAG_00642","SJAG_03699","SJAG_02485","SJAG_01533","SJAG_00475","SJAG_03048","SJAG_00071","SJAG_01210","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[102763,85878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[84399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[104743,113076,98109,92151,102467,107605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[110601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_01533":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein breakdown","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolism","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein degradation","type":"related"},{"name":"regulation of protein degradation tagging activity","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"exact"},{"name":"regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"exact"}],"termid":"GO:2000058","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L pseudogene 1","termid":"PBO:0050437"}


id: GO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes.","definition_xrefs":["PMID:12637589","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear vitamin D receptor binding","synonyms":[{"name":"VDR binding","type":"exact"},{"name":"calciferol receptor binding","type":"narrow"},{"name":"vitamin D receptor binding","type":"broad"}],"termid":"GO:0042809"}


id: GO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a cell in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11123917","PMID:26633512","GOC:add","PMID:23230295","PMID:22992735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated killing of host cell","synonyms":[{"name":"killing by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001907"}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: GO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxyl group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"intramolecular hydroxytransferase activity","secondary_identifiers":["EC:5.4.4.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring hydroxy groups","type":"exact"}],"termid":"GO:0050486"}


id: PBO:0059837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR1 pseudogene 1","termid":"PBO:0059837"}


id: GO:0005148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"prolactin receptor binding","synonyms":[{"name":"prolactin","type":"narrow"},{"name":"prolactin receptor ligand","type":"narrow"}],"termid":"GO:0005148"}


id: PBO:0046125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 4","termid":"PBO:0046125"}


id: PBO:0032711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032711"}


id: GO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tryptophan + malonyl-CoA = N(2)-malonyl-D-tryptophan + CoA + H+.","definition_xrefs":["EC:2.3.1.112","RHEA:23320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-tryptophan N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02482","MetaCyc:D-TRYPTOPHAN-N-MALONYLTRANSFERASE-RXN"],"synonyms":[{"name":"malonyl-CoA:D-tryptophan N-malonyltransferase activity","type":"related"}],"termid":"GO:0047836"}


id: PBO:0040254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 10","termid":"PBO:0040254"}


id: FYPO:0008113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which introns are retained at some, but not all introns at a higher level with increased frequency. Weak donor sequences are more affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased intron retention","termid":"FYPO:0008113"}


id: PBO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrulation brain homeobox 2","termid":"PBO:0048446"}


id: PBO:0073468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 4","termid":"PBO:0073468"}


id: PBO:0070510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 9","termid":"PBO:0070510"}


id: PBO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1 (predicted)","termid":"PBO:0034807"}


id: PBO:0046771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOSC10 antisense RNA 1","termid":"PBO:0046771"}


id: PBO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG2 catalytic domain","termid":"PBO:0018183"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: PR:Q8NIL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized isomerase YddE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense-enhancing sequence 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.07","secondary_identifiers":["UniProtKB:Q8NIL3"],"synonyms":[{"name":"AES factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yddE","type":"exact"}],"termid":"PR:Q8NIL3"}


id: PBO:0084911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated serine/threonine protein kinase involved in mating; phosphoactivated by Ste7p; substrates include Ste12p, Far1p, Bni1p, Sst2p; inhibits invasive growth during mating by phosphorylating Tec1p, promoting its; inhibits recruitment of Ste5p, Cdc42p-mediated asymmetry and mating morphogenesis","termid":"PBO:0084911"}


id: GO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane invagination at the site of separation of a multi-nucleate cell or syncytium into individual cells.","definition_xrefs":["PMID:27226317","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cellularization cleavage furrow","termid":"GO:0110070"}


id: GO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of photorespiration. Photorespiration is a light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photorespiration","termid":"GO:0080093"}


id: GO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving three xanthophylls, violoxanthin, antheraxanthin, and zeaxanthin. The xanthophyll cycle is involved in regulating energy dissipation in light harvesting complex II.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll cycle","secondary_identifiers":["MetaCyc:PWY-5945","Wikipedia:Xanthophyll#Xanthophyll_cycle"],"termid":"GO:0010028"}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: FYPO:0000455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"},{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of double-strand break sites during vegetative growth","synonyms":[{"name":"accumulation of DNA damage foci during vegetative growth","type":"related"},{"name":"accumulation of double-strand break sites during vegetative growth","type":"exact"},{"name":"increased number of DNA damage foci during vegetative growth","type":"related"},{"name":"increased number of double-strand break sites during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000455"}


id: GO:1900162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of lipid transporter activity","termid":"GO:0110114"},{"relation_name":"is_a","term_name":"regulation of phospholipid scramblase activity","termid":"GO:1900161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid scramblase activity","synonyms":[{"name":"down regulation of phospholipid scramblase activity","type":"exact"},{"name":"down-regulation of phospholipid scramblase activity","type":"exact"},{"name":"downregulation of phospholipid scramblase activity","type":"exact"},{"name":"inhibition of phospholipid scramblase activity","type":"narrow"}],"termid":"GO:1900162"}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32999","PMID:16458889","PMID:16612385","PMID:23246612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: PBO:0054260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1645","termid":"PBO:0054260"}


id: PBO:0042030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC86 antisense RNA 1","termid":"PBO:0042030"}


id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: GO:0000056
data:
  {"annotated_genes":["SJAG_01065","SJAG_01358","SJAG_02250","SJAG_01338"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86565,92717,95503,98742],"is_not":false,"summary":null,"term":"GO:0000056"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01338":null,"SJAG_01358":null,"SJAG_02250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0042254","GO:0006913","GO:0051179","GO:0044085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ribosomal small subunit export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000058"],"synonyms":[{"name":"30S ribosomal subunit export from nucleus","type":"narrow"},{"name":"40S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"ribosomal small subunit export out of nucleus","type":"exact"},{"name":"ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:0000056","terms_by_termid":{"GO:0000056":null}}


id: GO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell proliferation","termid":"GO:0060011"}


id: GO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iodide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"iodide transport","termid":"GO:0015705"}


id: PBO:0049149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 6","termid":"PBO:0049149"}


id: GO:0031110
data:
  {"annotated_genes":["SJAG_04312","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86875],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[97572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: PBO:0076883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 35","termid":"PBO:0076883"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: GO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear retinoic acid receptor, a ligand-regulated transcription factor belonging to the nuclear receptor superfamily.","definition_xrefs":["PMID:12476796","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nuclear retinoic acid receptor binding","synonyms":[{"name":"RAR binding","type":"exact"},{"name":"retinoic acid receptor binding","type":"broad"}],"termid":"GO:0042974"}


id: SO:1000020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion of a cytidine to a guanine.","direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_G_transversion","synonyms":[{"name":"C to G transversion","type":"exact"}],"termid":"SO:1000020"}


id: MOD:01815
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-glutamic acid residue to form L-glutamate thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:18406324","PubMed:19678698","RESID:AA0541","PubMed:893891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamate thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-3-carboxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[-1-azanyl-3-carboxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Glu-Cys)","type":"exact"},{"name":"L-glutamate thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01815"}


id: PBO:0086511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site","termid":"PBO:0086511"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:24004945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: GO:0097440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.","definition_xrefs":["NIF_Subcellular:sao273773228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical dendrite","termid":"GO:0097440"}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: GO:0015131
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83864],"is_not":false,"summary":null,"term":"GO:0015131"}]},"cv_name":"molecular_function","definition":"Enables the transfer of oxaloacetate, the anion of oxobutanedioic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"oxaloacetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015131","terms_by_termid":{"GO:0015131":null}}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Pachytene","Wikipedia:Meiosis#Pachytene"],"termid":"GO:0000239"}


id: FYPO:0006629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4-phosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(5)P level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006629"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: SO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are increased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_increase","synonyms":[{"name":"copy number increase","type":"exact"}],"termid":"SO:0001911"}


id: GO:0035318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Extrusion of a cellular projection from the apical membrane of an epithelial cell in an imaginal disc-derived wing. Outgrowth initiates approximately 35 hours after puparium formation from the distal side of the cell, and at this stage the cellular extension is termed a prehair.","definition_xrefs":["PMID:11064425","PMID:8947551","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair outgrowth","synonyms":[{"name":"wing hair outgrowth","type":"exact"},{"name":"wing prehair outgrowth","type":"related"}],"termid":"GO:0035318"}


id: PBO:0071844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 39","termid":"PBO:0071844"}


id: PBO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERG20","termid":"PBO:0000917"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["UniProtKB:O94309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: PBO:0057029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125b-1","termid":"PBO:0057029"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_01731","SJAG_01945","SJAG_02897","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90021,93597,95157,108416],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:16452632","PMID:20224745","RHEA:38567","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: PBO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 8","termid":"PBO:0072586"}


id: FYPO:0000566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular respiration","synonyms":[{"name":"normal cellular respiration during mitotic cell cycle","type":"related"},{"name":"normal cellular respiration during vegetative growth","type":"exact"},{"name":"normal respiration","type":"broad"},{"name":"normal respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: normal","type":"related"}],"termid":"FYPO:0000566"}


id: GO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + propionyl-CoA = succinyl-CoA + propionate.","definition_xrefs":["PMID:10769117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"propionyl-CoA:succinate CoA-transferase activity","secondary_identifiers":["MetaCyc:RXN0-268","RHEA:28010"],"synonyms":[{"name":"propionyl-CoA succinate CoA-transferase activity","type":"exact"},{"name":"propionyl-CoA:succinate CoA transferase activity","type":"exact"}],"termid":"GO:0043821"}


id: MOD:01824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-127 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01824"}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: GO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of native collagen in the triple helical region at Xaa-Gly bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete microbial collagenase activity (obsolete GO:0051405)","synonyms":[{"name":"Achromobacter iophagus collagenase","type":"related"},{"name":"Clostridium histolyticum collagenase activity","type":"narrow"},{"name":"Clostridium histolyticum proteinase A","type":"related"},{"name":"aspergillopeptidase C","type":"related"},{"name":"azocollase activity","type":"related"},{"name":"clostridiopeptidase A activity","type":"exact"},{"name":"clostridiopeptidase I","type":"related"},{"name":"clostridiopeptidase II","type":"related"},{"name":"collagen peptidase activity","type":"related"},{"name":"collagen protease activity","type":"related"},{"name":"collagenase 1 activity","type":"exact"},{"name":"collagenase A activity","type":"exact"},{"name":"collagenase I activity","type":"related"},{"name":"collagenase MMP-1","type":"related"},{"name":"kollaza","type":"related"},{"name":"matirx metalloproteinase-18","type":"related"},{"name":"matrix metalloproteinase-1","type":"related"},{"name":"matrix metalloproteinase-8","type":"related"},{"name":"metallocollagenase activity","type":"related"},{"name":"metalloproteinase-1","type":"related"},{"name":"microbial collagenase activity","type":"exact"},{"name":"nucleolysin","type":"related"},{"name":"soycollagestin","type":"related"}],"termid":"GO:0051405"}


id: PBO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug22","termid":"PBO:0000739"}


id: PBO:0034658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034658"}


id: GO:1990084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates strand-opening at the origin of replication, thereby interfering with replication initiation. This complex is thought to be involved in the regulation of replication under oxidative stress conditions. In E. coli, this complex is composed of DnaA and Dps.","definition_xrefs":["GOC:bhm","PMID:18284581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication inhibiting complex","termid":"GO:1990078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"DnaA-Dps complex","termid":"GO:1990084"}


id: PBO:0055517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2951","termid":"PBO:0055517"}


id: PR:Q1MTR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein with serine-rich domain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15481:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein with serine-rich domain 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.14c","secondary_identifiers":["UniProtKB:Q1MTR2"],"synonyms":[{"name":"Spom972h-RNPS1","type":"exact"}],"termid":"PR:Q1MTR2"}


id: RO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","termid":"RO:0002084"}


id: GO:0097608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium found in dinoflagellates. It coils around the cell and provides the forward thrust for motility. It is often contained in a furrow called the cingulum, and emerges from a flagellar pore located in the cingulum.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology","ISBN:0632009152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transverse flagellum","synonyms":[{"name":"transverse cilium","type":"exact"}],"termid":"GO:0097608"}


id: GO:1901725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:20497126"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylase activity (obsolete GO:1901725)","termid":"GO:1901725"}


id: PBO:0110369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L3","termid":"PBO:0110369"}


id: FYPO:0003527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the cell tip is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cell tip","synonyms":[{"name":"ectopic protein localization to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell end","type":"exact"},{"name":"protein mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003527"}


id: PBO:0077884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocated promoter region, nuclear basket protein","termid":"PBO:0077884"}


id: PBO:0109129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 1","termid":"PBO:0109129"}


id: GO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose from fructose-6-phosphate.","definition_xrefs":["GOC:dph","PMID:16339137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process from fructose-6-phosphate","secondary_identifiers":["Reactome:R-HSA-446205"],"termid":"GO:0061729"}


id: PBO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1_to_G0_transition","termid":"PBO:0031775"}


id: GO:0019912
data:
  {"annotated_genes":["SJAG_01000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87639],"is_not":false,"summary":null,"term":"GO:0019912"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; increases the activity of a cyclin-dependent protein kinase (CDK).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0140096","GO:0003824","GO:0140677","GO:0030234","GO:0003674","GO:0098772","GO:0004672"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019913"],"synonyms":[{"name":"CAK","type":"exact"},{"name":"cdk-activating kinase activity","type":"exact"},{"name":"cyclin-dependent protein kinase activating kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0019912","terms_by_termid":{"GO:0019912":null}}


id: PBO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_pH","termid":"PBO:0031500"}


id: FYPO:0002343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terbinafine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on terbinafine","synonyms":[{"name":"normal cell population growth in presence of terbinafine","type":"exact"},{"name":"normal cell population growth on terbinafine","type":"exact"},{"name":"normal cellular response to terbinafine","type":"related"},{"name":"normal vegetative cell population growth on terbinafine","type":"exact"}],"termid":"FYPO:0002343"}


id: SO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 25S rRNA is an RNA component of the large subunit of cytosolic ribosomes most eukaryotes.","definition_xrefs":["RSC:cb","PMID:2100998","PMID:15493135"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_25S_gene","termid":"SO:0002242"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_25S_rRNA","synonyms":[{"name":"cytosolic 25S LSU rRNA","type":"exact"},{"name":"cytosolic 25S rRNA","type":"exact"},{"name":"cytosolic 25S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 25S","type":"exact"}],"termid":"SO:0001002"}


id: PBO:0057919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622a","termid":"PBO:0057919"}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: PBO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B3","termid":"PBO:0043952"}


id: PBO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by phosphate","termid":"PBO:0001105"}


id: PBO:0068126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 433","termid":"PBO:0068126"}


id: RO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"},{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotically_interacts_with","termid":"RO:0002437"}


id: GO:1902168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23516620","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to catechin","termid":"GO:1902168"}


id: PBO:0079168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein","termid":"PBO:0079168"}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: PBO:0080054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 25","termid":"PBO:0080054"}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: PBO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YBR121C","termid":"PBO:0016536"}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: PBO:0005465
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.20","termid":"PBO:0005465"}


id: GO:0038060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which the signal is passed on within the cell by nitric oxide (NO) activating soluble guanylyl cyclase (sGC). Includes synthesis of nitric oxide, guanylyl cyclase activity, and downstream effectors that further transmit the signal within the cell following activation by cGMP.","definition_xrefs":["PMID:22019632","GOC:signaling","PMID:21549190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"},{"relation_name":"is_a","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nitric oxide-cGMP-mediated signaling","synonyms":[{"name":"NO-cGMP signaling pathway","type":"exact"},{"name":"canonical nitric oxide signaling","type":"exact"},{"name":"classical nitric oxide signaling","type":"exact"},{"name":"nitric oxide-cGMP-mediated signal transduction","type":"exact"},{"name":"nitric oxide-cGMP-mediated signaling pathway","type":"exact"},{"name":"nitric oxide-cGMP-mediated signalling pathway","type":"exact"}],"termid":"GO:0038060"}


id: PBO:0016583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic Reticulum metallopeptidase Erm1 (predicted)","termid":"PBO:0016583"}


id: GO:0010834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and shortening the telomeric DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere maintenance via telomere shortening (obsolete GO:0010834)","synonyms":[{"name":"telomere maintenance via telomere shortening","type":"exact"}],"termid":"GO:0010834"}


id: GO:0017069
data:
  {"annotated_genes":["SJAG_04898","SJAG_05009","SJAG_03210","SJAG_00559","SJAG_02185","SJAG_03460","SJAG_01327","SJAG_03070","SJAG_01819","SJAG_03547","SJAG_03983","SJAG_04911","SJAG_04497","SJAG_03954","SJAG_05240","SJAG_03498","SJAG_00531","SJAG_03214","SJAG_04117","SJAG_02469","SJAG_00414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101275,103884],"is_not":false,"summary":null,"term":"GO:0017069"},{"annotations":[106515,93684,87053,109224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030619"},{"annotations":[110917,111868,102154,108573,93685,97467,112412,101300,104390,91453,108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030620"},{"annotations":[88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030621"},{"annotations":[102365,93686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030623"},{"annotations":[88511,113218,92485,114275,104391,93687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017070"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear RNA (snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_00531":null,"SJAG_00559":null,"SJAG_01327":null,"SJAG_01819":null,"SJAG_02185":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000945"],"synonyms":[{"name":"base pairing with snRNA","type":"narrow"},{"name":"small nuclear RNA binding","type":"exact"}],"termid":"GO:0017069","terms_by_termid":{"GO:0017069":null,"GO:0017070":null,"GO:0030619":null,"GO:0030620":null,"GO:0030621":null,"GO:0030623":null}}


id: PBO:0058363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4735","termid":"PBO:0058363"}


id: PBO:0065701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine rich element binding protein G","termid":"PBO:0065701"}


id: PBO:0051604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 27","termid":"PBO:0051604"}


id: GO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}


id: PBO:0057536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 652","termid":"PBO:0057536"}


id: PBO:0078475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRHDE antisense RNA 1","termid":"PBO:0078475"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: GO:0004412
data:
  {"annotated_genes":["SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107871],"is_not":false,"summary":null,"term":"GO:0004412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homoserine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15761","MetaCyc:HOMOSERDEHYDROG-RXN"],"termid":"GO:0004412","terms_by_termid":{"GO:0004412":null}}


id: RO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x proper_distributary_of y iff x distributary_of y and x does not flow back into y","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proper_distributary_of","termid":"RO:0002382"}


id: PBO:0060166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase reductase","termid":"PBO:0060166"}


id: PBO:0039467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13D","termid":"PBO:0039467"}


id: PBO:0082164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylosuccinate lyase; catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway; expression is repressed by adenine and activated by Bas1p and Pho2p; mutations in human ortholog ADSL cause adenylosuccinase deficiency; human ADSL can complement yeast ADE13 null mutant","termid":"PBO:0082164"}


id: GO:0102085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = H+ + p-aminobenzoyl glutamate + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10884"],"termid":"GO:0102085"}


id: PBO:0087176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II third largest subunit B44; part of central core; similar to prokaryotic alpha subunit","termid":"PBO:0087176"}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: GO:2000339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 1 production","termid":"GO:2000338"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"negative regulation of CXCL1 production","type":"exact"},{"name":"negative regulation of KC production","type":"exact"},{"name":"negative regulation of SCYB1 production","type":"exact"},{"name":"negative regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000339"}


id: PBO:0079428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 11","termid":"PBO:0079428"}


id: GO:0045160
data:
  {"annotated_genes":["SJAG_04781","SJAG_04001","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90985,92507,98999],"is_not":false,"summary":null,"term":"GO:0045160"}]},"cv_name":"cellular_component","definition":"A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement.","definition_xrefs":["PMID:9438839","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin I complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045160","terms_by_termid":{"GO:0045160":null}}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:12422359","PubMed:9448752","Unimod:176#C","PubMed:11510821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: FYPO:0005430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches cluster together more than normal.","definition_xrefs":["PMID:8522609","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches during vegetative growth","termid":"FYPO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"aggregated actin cortical patches during vegetative growth","synonyms":[{"name":"actin cortical patch aggregation during vegetative growth","type":"related"},{"name":"aggregated F-actin patches during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch distribution during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch localization during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patches during mitotic cell cycle","type":"related"},{"name":"aggregated actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0005430"}


id: PBO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme Dbr1","termid":"PBO:0001161"}


id: PBO:0048125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 6","termid":"PBO:0048125"}


id: PBO:0039767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 2","termid":"PBO:0039767"}


id: PBO:0085435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) polymerase; one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs; required for gene looping","termid":"PBO:0085435"}


id: FYPO:0007555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to econazole. Cells stop growing (and may die) at a concentration of econazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:33223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to econazole","synonyms":[{"name":"hypersensitive to econazole","type":"exact"},{"name":"sensitive to ECZ","type":"exact"},{"name":"sensitive to econazole during mitotic cell cycle","type":"related"},{"name":"sensitive to econazole during vegetative growth","type":"exact"}],"termid":"FYPO:0007555"}


id: PR:O59774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic proteinase yapsin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.09","synonyms":[{"name":"Spom972h-yps1","type":"exact"}],"termid":"PR:O59774"}


id: GO:2000543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"positively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrulation","termid":"GO:2000543"}


id: GO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size uniformly in all directions. In general, a rounded cell morphology reflects isotropic cell growth.","definition_xrefs":["GOC:jid","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isotropic cell growth","synonyms":[{"name":"uniform cell growth","type":"related"}],"termid":"GO:0051210"}


id: PR:Q9HE13
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.02 gene.","definition_xrefs":["UniProtKB:Q9HE13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1399.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.02","synonyms":[{"name":"Spom972h-SPAC1399.02","type":"exact"}],"termid":"PR:Q9HE13"}


id: PBO:0039430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin 1","termid":"PBO:0039430"}


id: PBO:0085722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the assembly of 60S ribosomal subunits; functionally interacts with Dbp6p; functions in a late nucleoplasmic step of the assembly","termid":"PBO:0085722"}


id: GO:0018333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-threonine to form O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-threonine (obsolete GO:0018333)","termid":"GO:0018333"}


id: GO:0033368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protease is transported to, or maintained in, a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mast cell secretory granule","termid":"GO:0033367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protease localization to mast cell secretory granule","synonyms":[{"name":"protease localisation in mast cell secretory granule","type":"exact"},{"name":"protease localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033368"}


id: GO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation, in a germarium, of a group of interconnected cells derived from a single female gonial founder cell (a cystoblast). The germarium is the most anterior portion of an insect ovariole. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:10370240","PMID:9442902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ-line cyst formation","termid":"GO:0048135"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived female germ-line cyst formation","synonyms":[{"name":"germarium-derived female germline cyst formation","type":"exact"}],"termid":"GO:0030727"}


id: PBO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNC4 divergent transcript","termid":"PBO:0052117"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: PBO:0031191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_thickness_during_vegetative_growth","termid":"PBO:0031191"}


id: PR:Q9P6I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cha4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1683.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.13c","synonyms":[{"name":"Spom972h-cha4","type":"exact"}],"termid":"PR:Q9P6I9"}


id: GO:0043242
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_01894","SJAG_04703","SJAG_02691","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83698,114633,110287,94580,87835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031564"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02691":null,"SJAG_02700":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein complex disassembly","type":"exact"},{"name":"down-regulation of protein complex disassembly","type":"exact"},{"name":"downregulation of protein complex disassembly","type":"exact"},{"name":"inhibition of protein complex disassembly","type":"narrow"},{"name":"negative regulation of protein complex disassembly","type":"related"}],"termid":"GO:0043242","terms_by_termid":{"GO:0031564":null,"GO:0051016":null}}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: GO:0016363
data:
  {"annotated_genes":["SJAG_03025","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88049,109480],"is_not":false,"summary":null,"term":"GO:0016363"}]},"cv_name":"cellular_component","definition":"The dense fibrillar network lying on the inner side of the nuclear membrane.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear periphery","termid":"GO:0034399"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02661":null,"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0034399"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0034399","GO:0005575"],"is_obsolete":false,"name":"nuclear matrix","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nuclear_matrix"],"synonyms":[{"name":"nucleoskeleton","type":"exact"}],"termid":"GO:0016363","terms_by_termid":{"GO:0016363":null}}


id: PBO:0031788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_fusion_during_conjugation","termid":"PBO:0031788"}


id: GO:0050402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylono-1,4-lactone + H2O = D-xylonate.","definition_xrefs":["EC:3.1.1.68","MetaCyc:XYLONO-14-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"xylono-1,4-lactonase activity","secondary_identifiers":["MetaCyc:RXN-19753","RHEA:18341"],"synonyms":[{"name":"D-xylono-1,4-lactone lactonohydrolase activity","type":"related"},{"name":"xylono-g-lactonase activity","type":"related"},{"name":"xylonolactonase activity","type":"related"}],"termid":"GO:0050402"}


id: GO:1902274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"positively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"activation of (R)-carnitine transmembrane transport","type":"narrow"},{"name":"up regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"up-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"upregulation of (R)-carnitine transmembrane transport","type":"exact"}],"termid":"GO:1902274"}


id: FYPO:0001415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sulfide:quinone oxidoreductase activity","synonyms":[{"name":"abnormal sulfide-quinone reductase activity","type":"exact"},{"name":"abnormal sulfide:quinone reductase activity","type":"exact"},{"name":"abnormal sulphide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001415"}


id: PATO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic (for occurrence)","termid":"PATO:0001460"}


id: PBO:0081774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705B","termid":"PBO:0081774"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_02503","SJAG_03161","SJAG_04210","SJAG_01887","SJAG_00884","SJAG_00819","SJAG_04933","SJAG_01698","SJAG_04995","SJAG_02031","SJAG_02627","SJAG_02348","SJAG_02667","SJAG_03722","SJAG_02556","SJAG_02362","SJAG_04156","SJAG_01049","SJAG_03436","SJAG_04863","SJAG_00939","SJAG_00757","SJAG_00768","SJAG_03682","SJAG_03780","SJAG_05239","SJAG_04418","SJAG_02181","SJAG_03886","SJAG_00871","SJAG_02079","SJAG_05214","SJAG_03957","SJAG_01708","SJAG_00796","SJAG_04574","SJAG_00399","SJAG_01436","SJAG_01410","SJAG_03068","SJAG_02822","SJAG_00327","SJAG_01354","SJAG_03855","SJAG_01762","SJAG_01677","SJAG_00857","SJAG_03495","SJAG_04245","SJAG_04410","SJAG_04530","SJAG_01076","SJAG_02545","SJAG_02267","SJAG_00984","SJAG_03832","SJAG_02828","SJAG_02194","SJAG_01771","SJAG_00619"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83734,84509,85174,85270,85919,86294,87460,88198,88842,91372,91812,91875,93087,94762,94763,95111,96253,96725,97226,97925,98701,98927,100727,101110,102240,103074,103504,104404,104941,105903,106095,106372,106699,107368,107443,107444,107954,108334,109341,109522,110623,111091,111267,111504,111676,111911,112260,112535,112824,113145,113587,114174,114761,114933],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[109339,108444,111909,98925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[90703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[84642,91698,107420,103970,106240,110583,90704,107445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["PMID:22976174","GOC:elh","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_00984":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02181":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003699","GO:0003698"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PATO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a point.","definition_xrefs":["PATOC:http://www.merriam-webster.com/dictionary/pointed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointed","termid":"PATO:0002258"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: GO:0042970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of homoserine from one side of a membrane to the other. Homoserine is alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"homoserine transmembrane transporter activity","synonyms":[{"name":"homoserine transporter activity","type":"broad"}],"termid":"GO:0042970"}


id: PBO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene (predicted)","termid":"PBO:0004983"}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: PBO:0087808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","termid":"PBO:0087808"}


id: GO:2000877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"negatively_regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligopeptide transport","termid":"GO:2000877"}


id: FYPO:0004732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer astral microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"astral microtubules present in decreased numbers","synonyms":[{"name":"astral microtubules present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"astral microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"astral microtubules present in reduced numbers","type":"exact"},{"name":"decreased level of astral microtubules","type":"exact"},{"name":"reduced number of astral microtubules","type":"exact"}],"termid":"FYPO:0004732"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:23575307","GOC:bc","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: GO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes whose promoters contain a specific sequence elements such as the unfolded protein response element (UPRE; consensus CAGCGTG) or the ER stress-response element (ERSE; CCAAN(N)9CCACG), as a result of signaling via the unfolded protein response.","definition_xrefs":["PMID:12042763","GOC:txnOH","GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response (obsolete GO:0006990)","synonyms":[{"name":"positive regulation of transcription of target genes involved in unfolded protein response","type":"exact"},{"name":"unfolded protein response, activation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, positive regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, stimulation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, target gene transcriptional activation","type":"broad"},{"name":"unfolded protein response, up regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, up-regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, upregulation of target gene transcription","type":"exact"}],"termid":"GO:0006990"}


id: PBO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulator Est1","termid":"PBO:0004294"}


id: FYPO:0006726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CMG complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal CMG complex assembly","synonyms":[{"name":"normal CMG complex assembly during mitotic cell cycle","type":"related"},{"name":"normal CMG complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006726"}


id: PBO:0079098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 11-1","termid":"PBO:0079098"}


id: PBO:0029680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_telomeres","termid":"PBO:0029680"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: GO:0000035
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93935],"is_not":false,"summary":null,"term":"GO:0000035"}]},"cv_name":"molecular_function","definition":"Binding to an acyl group, any group formally derived by removal of the hydroxyl group from the acid function of a carboxylic acid.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acyl binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA or acyl binding","type":"broad"}],"termid":"GO:0000035","terms_by_termid":{"GO:0000035":null}}


id: GO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-lysine to peptidyl-4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PMID:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dihydroxylation to 4,5-dihydroxy-L-lysine","termid":"GO:0030963"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: SO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a half KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"500B_downstream_variant","synonyms":[{"name":"500B downstream variant","type":"exact"},{"name":"near-gene-3","type":"exact"}],"termid":"SO:0001634"}


id: PBO:0039948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 1","termid":"PBO:0039948"}


id: PBO:0062977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein nuclear 1","termid":"PBO:0062977"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: GO:0046575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of acetylesters (as acetate) from galacturonic acid residues in the backbone of rhamnogalacturonan.","definition_xrefs":["PMID:10801485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylesterase activity","termid":"GO:0008126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"rhamnogalacturonan acetylesterase activity","termid":"GO:0046575"}


