# terms

id: PBO:0091782
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein","termid":"PBO:0091782"}


id: PBO:0072861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 2, mitochondrial","termid":"PBO:0072861"}


id: PBO:0080376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS8 subunit of CORVET complex","termid":"PBO:0080376"}


id: PBO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA7B divergent transcript","termid":"PBO:0048905"}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: PBO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 1","termid":"PBO:0001080"}


id: GO:0033545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C.","definition_xrefs":["GOC:mah","MetaCyc:PWY-6555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process","termid":"GO:0010264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, lipid-dependent","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthetic process, lipid-dependent","type":"exact"}],"termid":"GO:0033545"}


id: PBO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB3 pseudogene 1","termid":"PBO:0045906"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: GO:0071537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a C3HC4-type RING finger domain interaction.","definition_xrefs":["InterPro:IPR018957","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete C3HC4-type RING finger domain-mediated complex assembly (obsolete GO:0071537)","synonyms":[{"name":"zinc finger C3HC4 type domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071537"}


id: GO:1903906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23575248","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"}


id: PBO:0061161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase 1","termid":"PBO:0061161"}


id: PBO:0083123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; involved in synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; G353A missense mutation in human ortholog ALG3 implicated in carbohydrate deficient glycoprotein syndrome type IV, which is characterized by microcephaly, severe epilepsy, minimal psychomotor development, partial deficiency of sialic acids in serum glycoproteins; wild-type human ALG3 can complement yeast alg3 mutant","termid":"PBO:0083123"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: GO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075157)","synonyms":[{"name":"positive regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"positive regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075157"}


id: GO:0047209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + UDP-D-glucose = coniferin + UDP.","definition_xrefs":["MetaCyc:2.4.1.111-RXN","EC:2.4.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl-alcohol glucosyltransferase activity","secondary_identifiers":["RHEA:23944"],"synonyms":[{"name":"UDP-glucose coniferyl alcohol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-coniferyl alcohol glucosyltransferase activity","type":"related"}],"termid":"GO:0047209"}


id: PBO:0005026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis (predicted)","termid":"PBO:0005026"}


id: PBO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 3","termid":"PBO:0047462"}


id: PBO:0026802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026802"}


id: PBO:0018090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase Rbk1 (predicted)","termid":"PBO:0018090"}


id: PBO:0056737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 1","termid":"PBO:0056737"}


id: GO:0007559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The breakdown of tissues; usually, if not always, accompanied by cell death, followed by the complete dissolution of dead tissue.","definition_xrefs":["GOC:dph","GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete histolysis (obsolete GO:0007559)","secondary_identifiers":["Wikipedia:Histolysis"],"termid":"GO:0007559"}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: PBO:0064918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3A","termid":"PBO:0064918"}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["GOC:pz","RHEA:36779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-8953","EC:2.6.1.102"],"termid":"GO:0102933"}


id: PBO:0109113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 6, tRNA N3-cytidine","termid":"PBO:0109113"}


id: PBO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrofolatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0004512"}


id: PBO:0045064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG3 antisense RNA 1","termid":"PBO:0045064"}


id: PR:Q09173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.07c","synonyms":[{"name":"PP2C-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc3","type":"exact"}],"termid":"PR:Q09173"}


id: PBO:0026839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026839"}


id: SO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_three_prime_overlap","synonyms":[{"name":"five prime-three prime overlap","type":"exact"}],"termid":"SO:0000073"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: PBO:0027978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_dimethylation","termid":"PBO:0027978"}


id: PBO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer","termid":"PBO:0005527"}


id: GO:0045033
data:
  {"annotated_genes":["SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102502],"is_not":false,"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The acquisition of peroxisomes by daughter cells from the mother cell after replication. In Saccharomyces cerevisiae, the number of peroxisomes cells is fairly constant; a subset of the organelles are targeted and segregated to the bud in a highly ordered, vectorial process. Efficient segregation of peroxisomes from mother to bud is dependent on the actin cytoskeleton, and active movement of peroxisomes along actin filaments is driven by the class V myosin motor protein, Myo2p.","definition_xrefs":["PMID:11733545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"peroxisome inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045033","terms_by_termid":{"GO:0045033":null}}


id: GO:0099089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endoplasmic reticulum into a postsynaptic compartment such as a dendritic spine.","definition_xrefs":["PMID:21151132","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of ER localization","termid":"GO:0051686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of endoplasmic reticulum localization to postsynapse","synonyms":[{"name":"establishment of ER localization to postsynapse","type":"exact"}],"termid":"GO:0099089"}


id: FYPO:0002182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and spheroid cells (obsolete FYPO:0002182)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002182"}


id: PBO:0031744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intracellular_transport","termid":"PBO:0031744"}


id: PBO:0047500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap structure-specific endonuclease 1 pseudogene 1","termid":"PBO:0047500"}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: PBO:0088416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit 11","termid":"PBO:0088416"}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11048:SF3","OMA:SCHPO03301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: GO:0034697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin I","synonyms":[{"name":"response to prostaglandin I stimulus","type":"exact"}],"termid":"GO:0034697"}


id: GO:0000314
data:
  {"annotated_genes":["SJAG_00782","SJAG_00860","SJAG_01734","SJAG_04918","SJAG_03065","SJAG_02201","SJAG_04378","SJAG_04753","SJAG_00148","SJAG_00628","SJAG_02777","SJAG_05320","SJAG_04788","SJAG_00060","SJAG_03584","SJAG_02643","SJAG_02452","SJAG_04494","SJAG_04173","SJAG_04164","SJAG_00513","SJAG_02359","SJAG_01767","SJAG_03053","SJAG_00944","SJAG_01468","SJAG_00889","SJAG_02067","SJAG_01520","SJAG_00105","SJAG_02324","SJAG_04281"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92269,90963,104432,90082,99772,106539,108266,106250,89237,102202,98037,104187,106005,93646,91548,85341,103781,99113,111569,93647,93884,101834,90064,85400,89774,98819,114069,103930,99704,105217,87579,112007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of an organellar ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small ribosomal subunit","termid":"GO:0015935"},{"relation_name":"part_of","term_name":"organellar ribosome","termid":"GO:0000313"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"organellar small ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000314","terms_by_termid":{"GO:0005763":null}}


id: GO:0120169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cold stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of cold stimulus","termid":"GO:0062035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cold stimulus involved in thermoception","synonyms":[{"name":"sensory detection of cold stimulus during thermoception","type":"exact"},{"name":"sensory transduction of cold stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of cold stimulus","type":"exact"},{"name":"thermoception, sensory transduction of cold stimulus","type":"exact"}],"termid":"GO:0120169"}


id: PR:O74458
data:
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id: PBO:0088154
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id: GO:0070207
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id: PBO:0063783
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id: PBO:0064710
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id: PBO:0052686
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id: PBO:0044210
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id: PBO:0002013
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id: FYPO:0007951
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id: GO:0048853
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id: GO:0019439
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id: PBO:0056221
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id: GO:0016341
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id: PBO:0052082
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin interacting protein","termid":"PBO:0052082"}


id: PBO:0075938
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id: PBO:0036101
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id: GO:0018929
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.","definition_xrefs":["UM-BBD_pathwayID:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methyl fluoride metabolic process","synonyms":[{"name":"methyl fluoride metabolism","type":"exact"}],"termid":"GO:0018929"}


id: GO:0021701
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","PMID:15157725","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: PATO:0001719
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id: GO:0004138
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyguanosine + ATP = ADP + dGMP + 2 H+.","definition_xrefs":["EC:2.7.1.113","RHEA:19201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"deoxyguanosine kinase activity","secondary_identifiers":["KEGG_REACTION:R01967","MetaCyc:DEOXYGUANOSINE-KINASE-RXN"],"synonyms":[{"name":"(dihydroxypropoxymethyl)guanine kinase activity","type":"related"},{"name":"2'-deoxyguanosine kinase activity","type":"related"},{"name":"ATP:deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"NTP-deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyguanosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004138"}


id: PBO:0051161
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-42 (pseudogene)","termid":"PBO:0051161"}


id: PBO:0045410
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 12","termid":"PBO:0045410"}


id: PBO:0086674
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2","termid":"PBO:0086674"}


id: GO:0045297
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific behavior of an organism following mating.","definition_xrefs":["GOC:bf","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete post-mating behavior (obsolete GO:0045297)","synonyms":[{"name":"post-mating behaviour","type":"exact"}],"termid":"GO:0045297"}


id: PBO:0071924
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PBO:0058955
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK interacting serine/threonine kinase 2","termid":"PBO:0058955"}


id: PATO:0001793
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on right side of a another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right side of","termid":"PATO:0001793"}


id: PBO:0088074
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease involved in protein deubiquitination; forms a complex with AAA peroxins Pex1p and Pex6p; deubiquitinates mono- and polyubiquitinated forms of Pex5p; deubiquitinates Clb5p, counteracting APC activity, and facilitating both Clb5p accumulation and S phase entry; physically interacts with anaphase-promoting complex/cyclosome (APC/C) activator, Cdh1p; catalytic activity regulated by an N-terminal TRAF-like domain and and C-terminal sequences","termid":"PBO:0088074"}


id: GO:0052117
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host environment (obsolete GO:0052117)","synonyms":[{"name":"aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052117"}


id: PBO:0057769
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2115","termid":"PBO:0057769"}


id: PBO:0027425
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id: PBO:0056934
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1-1 host gene","termid":"PBO:0056934"}


id: PBO:0053018
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 antisense RNA 1","termid":"PBO:0053018"}


id: PATO:0000378
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000378 absolute frequency value (obsolete PATO:0000378)","termid":"PATO:0000378"}


id: GO:0061799
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["GOC:dph","GOC:ik","PMID:25896388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["EC:4.6.1.17","MetaCyc:RXN-17809","RHEA:49580"],"termid":"GO:0061799"}


id: FYPO:0007224
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is decreased in centromere outer repeat regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507","PMID:31822915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased heterochromatin assembly at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased establishment of heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin formation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007224"}


id: FYPO:0005236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21945095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at stalled replication fork","synonyms":[{"name":"normal protein localisation to chromatin at stalled replication fork","type":"exact"},{"name":"normal protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0005236"}


id: PBO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.17","termid":"PBO:0005652"}


id: GO:0015778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hexuronide across a membrane. Hexuronides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of a hexuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"hexuronide transmembrane transport","synonyms":[{"name":"hexuronide transport","type":"broad"}],"termid":"GO:0015778"}


id: PBO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-12","termid":"PBO:0051070"}


id: PBO:0061727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 1","termid":"PBO:0061727"}


id: PBO:0083480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3","termid":"PBO:0083480"}


id: PBO:0049343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 1","termid":"PBO:0049343"}


id: PBO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA Omt3","termid":"PBO:0011112"}


id: PBO:0091841
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A replaces histone H3 in new nucleosomes at centromeres during mitotic G2 phase","termid":"PBO:0091841"}


id: MOD:00703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated residue","synonyms":[{"name":"IpRes","type":"exact"}],"termid":"MOD:00703"}


id: PBO:0108613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C, pseudogene","termid":"PBO:0108613"}


id: PATO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a fringe or border of hairlike or fingerlike projections.","definition_xrefs":["PATO:WS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbriated","termid":"PATO:0002311"}


id: GO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.","definition_xrefs":["EC:2.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyclopropane-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["MetaCyc:2.1.1.79-RXN","RHEA:11988"],"synonyms":[{"name":"CFA synthase activity","type":"related"},{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (cyclizing)","type":"related"},{"name":"cyclopropane fatty acid synthase activity","type":"related"},{"name":"cyclopropane fatty acid synthetase activity","type":"related"},{"name":"cyclopropane synthase activity","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0008825"}


id: PBO:0069215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 470, pseudogene","termid":"PBO:0069215"}


id: PBO:0057083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-2","termid":"PBO:0057083"}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03834","PANTHER:PTHR10598:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: GO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine metabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine metabolism","type":"exact"}],"termid":"GO:0019276"}


id: GO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002924"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, classical pathway","synonyms":[{"name":"down regulation of complement activation, classical pathway","type":"exact"},{"name":"down-regulation of complement activation, classical pathway","type":"exact"},{"name":"downregulation of complement activation, classical pathway","type":"exact"},{"name":"inhibition of complement activation, classical pathway","type":"narrow"},{"name":"negative regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0045959"}


id: GO:0034021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to silicon dioxide","synonyms":[{"name":"response to silica","type":"exact"},{"name":"response to silox","type":"exact"}],"termid":"GO:0034021"}


id: PBO:0034549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034549"}


id: PBO:0060566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 2, pseudogene","termid":"PBO:0060566"}


id: PBO:0074518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A10","termid":"PBO:0074518"}


id: PBO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2450","termid":"PBO:0055035"}


id: PBO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis","termid":"PBO:0002358"}


id: PBO:0055831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 1","termid":"PBO:0055831"}


id: PBO:0054566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1968","termid":"PBO:0054566"}


id: GO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cone-shaped structure in the head of a spermatozoon, which is formed by the coalescence of Golgi fragments following the completion of meiosis. The acroblast is situated adjacent to the acrosomal vesicle.","definition_xrefs":["GOC:sart","PMID:19934220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"acroblast","synonyms":[{"name":"spermatid acroblast","type":"exact"}],"termid":"GO:0036063"}


id: PBO:0088926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem7","termid":"PBO:0088926"}


id: PBO:0110260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb11","termid":"PBO:0110260"}


id: PBO:0051447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-3","termid":"PBO:0051447"}


id: PBO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036212"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PBO:0058594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6726","termid":"PBO:0058594"}


id: FYPO:0006820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate of cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah","GO:0016049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell growth rate","termid":"FYPO:0006820"}


id: GO:0015961
data:
  {"annotated_genes":["SJAG_04939","SJAG_04870","SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[107333,113092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04870":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"diadenosine polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate breakdown","type":"exact"},{"name":"diadenosine polyphosphate catabolism","type":"exact"},{"name":"diadenosine polyphosphate degradation","type":"exact"}],"termid":"GO:0015961","terms_by_termid":{"GO:0015964":null,"GO:1901907":null,"GO:1901909":null}}


id: FYPO:0006410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during stationary phase","synonyms":[{"name":"decreased cellular NO level during stationary phase","type":"exact"},{"name":"decreased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"decreased nitric oxide accumulation during stationary phase","type":"related"},{"name":"reduced cellular nitric oxide level during stationary phase","type":"exact"}],"termid":"FYPO:0006410"}


id: PBO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sodium_export","termid":"PBO:0030821"}


id: PBO:0030672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030672"}


id: FYPO:0001541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of molybdenum ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular molybdenum level","synonyms":[{"name":"normal cellular molybdenum accumulation","type":"related"},{"name":"normal cellular molybdenum ion level","type":"exact"},{"name":"normal cellular molybdenum level during mitotic cell cycle","type":"related"},{"name":"normal cellular molybdenum level during vegetative growth","type":"exact"}],"termid":"FYPO:0001541"}


id: GO:0042340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"keratan sulfate catabolic process","synonyms":[{"name":"keratan sulfate breakdown","type":"exact"},{"name":"keratan sulfate catabolism","type":"exact"},{"name":"keratan sulfate degradation","type":"exact"},{"name":"keratan sulphate catabolic process","type":"exact"},{"name":"keratan sulphate catabolism","type":"exact"}],"termid":"GO:0042340"}


id: PBO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2105","termid":"PBO:0054696"}


id: FYPO:0000683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of an enzyme is increased relative to normal. Basal enzyme activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"output_of","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"constitutive catalytic activity","synonyms":[{"name":"constitutive catalytic activity during mitotic cell cycle","type":"related"},{"name":"constitutive catalytic activity during vegetative growth","type":"exact"},{"name":"constitutive enzymatic activity","type":"exact"},{"name":"constitutively active enzyme","type":"related"}],"termid":"FYPO:0000683"}


id: PBO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C (predicted)","termid":"PBO:0004825"}


id: PBO:0064477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma 2, accessory subunit","termid":"PBO:0064477"}


id: GO:0035051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiocyte differentiation","synonyms":[{"name":"cardiac cell differentiation","type":"exact"},{"name":"heart cell differentiation","type":"exact"}],"termid":"GO:0035051"}


id: PR:Q09769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Lon protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00272","PANTHER:PTHR10046:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.06c","secondary_identifiers":["UniProtKB:Q09769"],"synonyms":[{"name":"Spom972h-LONP1","type":"exact"}],"termid":"PR:Q09769"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: PBO:0080645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 93","termid":"PBO:0080645"}


id: PBO:0063621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, muscle","termid":"PBO:0063621"}


id: PBO:0012612
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papulacandin B resistance","termid":"PBO:0012612"}


id: GO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + H+ + NADPH + O2 = (1R,5S)-carveol + H2O + NADP+.","definition_xrefs":["RHEA:18957","EC:1.14.14.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-limonene 6-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.84-RXN","KEGG_REACTION:R06119"],"synonyms":[{"name":"(+)-limonene 6-monooxygenase activity","type":"related"},{"name":"(+)-limonene-6-hydroxylase activity","type":"related"},{"name":"(R)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"exact"}],"termid":"GO:0052741"}


id: PBO:0040331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 6","termid":"PBO:0040331"}


id: PBO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein B","termid":"PBO:0042722"}


id: GO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the guanylyltransferase enzyme responsible for adding a 7-methylguanosine cap on pre-mRNA becomes associated with the RNA polymerase II holoenzyme complex and the 5' end of a transcript.","definition_xrefs":["GOC:bf","PMID:10594013","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:0036031)","synonyms":[{"name":"capping enzyme targeting to RNA polymerase II","type":"exact"},{"name":"recruitment of guanylyltransferase to RNA polymerase II holoenzyme complex","type":"exact"}],"termid":"GO:0036031"}


id: PBO:0049150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 7","termid":"PBO:0049150"}


id: GO:0017024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I myosin; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"myosin I binding","termid":"GO:0017024"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"NAD+ ADP-ribosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9686061","Reactome:R-HSA-5688276","Reactome:R-HSA-8938073","Reactome:R-HSA-8948800","Reactome:R-HSA-5651723","Reactome:R-HSA-9729279","Reactome:R-HSA-5687653","Reactome:R-HSA-2187325","Reactome:R-HSA-3640858","MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: GO:0010286
data:
  {"annotated_genes":["SJAG_03527","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99979,100093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of an organism in response to high temperatures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thermotolerance","type":"related"}],"termid":"GO:0010286","terms_by_termid":{"GO:0070370":null}}


id: PBO:0069329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 588, pseudogene","termid":"PBO:0069329"}


id: PR:O74773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA mismatch repair protein Msh2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein msh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.01c","secondary_identifiers":["UniProtKB:O74773"],"synonyms":[{"name":"Spom972h-MSH2","type":"exact"}],"termid":"PR:O74773"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115569],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: PR:O14185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.10c","synonyms":[{"name":"Spom972h-stg1","type":"exact"},{"name":"calponin homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14185"}


id: PBO:0084462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; functionally redundant with Ssk2p; interacts with and is activated by Ssk1p; phosphorylates Pbs2p; SSK22 has a paralog, SSK2, that arose from the whole genome duplication","termid":"PBO:0084462"}


id: PBO:0039180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 10","termid":"PBO:0039180"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: PBO:0029749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_calcium_level","termid":"PBO:0029749"}


id: PBO:0047048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member C","termid":"PBO:0047048"}


id: GO:1900090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol biosynthetic process","termid":"GO:1900088"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inositol biosynthetic process","synonyms":[{"name":"activation of inositol anabolism","type":"exact"},{"name":"activation of inositol biosynthesis","type":"exact"},{"name":"activation of inositol biosynthetic process","type":"narrow"},{"name":"activation of inositol formation","type":"exact"},{"name":"activation of inositol synthesis","type":"exact"},{"name":"activation of myo-inositol biosynthesis","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process","type":"exact"},{"name":"positive regulation of inositol anabolism","type":"exact"},{"name":"positive regulation of inositol biosynthesis","type":"exact"},{"name":"positive regulation of inositol formation","type":"exact"},{"name":"positive regulation of inositol synthesis","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"up regulation of inositol anabolism","type":"exact"},{"name":"up regulation of inositol biosynthesis","type":"exact"},{"name":"up regulation of inositol biosynthetic process","type":"exact"},{"name":"up regulation of inositol formation","type":"exact"},{"name":"up regulation of inositol synthesis","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"up-regulation of inositol anabolism","type":"exact"},{"name":"up-regulation of inositol biosynthesis","type":"exact"},{"name":"up-regulation of inositol biosynthetic process","type":"exact"},{"name":"up-regulation of inositol formation","type":"exact"},{"name":"up-regulation of inositol synthesis","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"upregulation of inositol anabolism","type":"exact"},{"name":"upregulation of inositol biosynthesis","type":"exact"},{"name":"upregulation of inositol biosynthetic process","type":"exact"},{"name":"upregulation of inositol formation","type":"exact"},{"name":"upregulation of inositol synthesis","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900090"}


id: PBO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase Fio1","termid":"PBO:0002425"}


id: PBO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 1","termid":"PBO:0052622"}


id: PR:O43020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.06","secondary_identifiers":["UniProtKB:O43020"],"synonyms":[{"name":"Spom972h-rpsP","type":"exact"}],"termid":"PR:O43020"}


id: GO:0070477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular part that represents the innermost portion of an endospore; the endospore core is dehydrated, enriched in dipicolinic acid and divalent cations, and metabolically inactive.","definition_xrefs":["GOC:mah","PMID:18035610","PMID:15035041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endospore core","termid":"GO:0070477"}


id: PBO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine, mitochondrial","termid":"PBO:0005876"}


id: PBO:0069258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 513, pseudogene","termid":"PBO:0069258"}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: GO:0021702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell differentiation","termid":"GO:0021702"}


id: PBO:0043029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP3 and RNF103 antisense RNA 1","termid":"PBO:0043029"}


id: PBO:0049190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 1","termid":"PBO:0049190"}


id: PBO:0077715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 1","termid":"PBO:0077715"}


id: PBO:0030662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcriptional_response_to_pheromone","termid":"PBO:0030662"}


id: PBO:0065218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 1","termid":"PBO:0065218"}


id: MOD:01553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01553"}


id: PBO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 4","termid":"PBO:0060830"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: GO:0102511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside 7-O-glucosyltransferase (acyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14440"],"termid":"GO:0102511"}


id: FYPO:0007450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but remains there for a shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:12789340","PMID:15809031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased maintenance of protein location in cell cortex of cell tip","synonyms":[{"name":"decreased maintenance of protein location in cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein location in cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein location in cell cortex of cell tip","type":"exact"}],"termid":"FYPO:0007450"}


id: PBO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36, DUF947 family (predicted)","termid":"PBO:0001626"}


id: GO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in).","definition_xrefs":["PMID:15153772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0003674","GO:0022857","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity","termid":"GO:0090585"}


id: PBO:0076603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 22B","termid":"PBO:0076603"}


id: PBO:0065913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L intronic transcript 1","termid":"PBO:0065913"}


id: PBO:0084565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane glycoprotein v-SNARE; involved in retrograde transport from the Golgi to the endoplasmic reticulum (ER); required for N- and O-glycosylation in the Golgi but not in the ER and for efficient nuclear fusion during mating; mediates Sey1p-independent homotypic ER fusion; interacts with the Dsl1p complex through Tip20p","termid":"PBO:0084565"}


id: FYPO:0000850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to stress during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"resistance to stress during mitotic cell cycle","type":"related"},{"name":"resistant to stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000850"}


id: PBO:0087525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle","termid":"PBO:0087525"}


id: SO:1000056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation affects the amino acid coding sequence of a gene; this region includes both the initiator and terminator codons.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000056 sequence_variant_causing_amino_acid_coding_codon_change_in_transcript (obsolete SO:1000056)","synonyms":[{"name":"mutaton causing amino acid coding codon change in transcript","type":"related"},{"name":"sequence variant causing amino acid coding codon change in transcript","type":"exact"}],"termid":"SO:1000056"}


id: PBO:0087619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; Cop9 signalosome is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling","termid":"PBO:0087619"}


id: PBO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana gsh2","termid":"PBO:0007272"}


id: GO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Neu/ErbB-2 receptor activity (obsolete GO:0005012)","synonyms":[{"name":"Neu/ErbB-2 receptor activity","type":"exact"}],"termid":"GO:0005012"}


id: FYPO:0004474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle DNA replication checkpoint is normal (i.e. indistinguishable from wild type). The mitotic DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"normal DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitotic DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0004474"}


id: PBO:0081795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 725, pseudogene","termid":"PBO:0081795"}


id: PR:Q9UUK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.08c gene.","definition_xrefs":["UniProtKB:Q9UUK0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase C1952.08c homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.08c","synonyms":[{"name":"PNP/PMP oxidase C1952.08c homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx C1952.08c homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1952.08c","type":"exact"}],"termid":"PR:Q9UUK0"}


id: PBO:0066305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region","termid":"PBO:0066305"}


id: PBO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb6","termid":"PBO:0090692"}


id: PBO:0031444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_central_constriction","termid":"PBO:0031444"}


id: GO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 1 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell lineage commitment","synonyms":[{"name":"T-helper 1 cell fate commitment","type":"exact"},{"name":"Th1 cell lineage commitment","type":"exact"},{"name":"Th1 fate commitment","type":"exact"}],"termid":"GO:0002296"}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["UniProtKB:O14256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: PBO:0070936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 44","termid":"PBO:0070936"}


id: PBO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3 (predicted)","termid":"PBO:0017783"}


id: GO:0160033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"}


id: GO:0090706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which plant organ primordia are formed is generated and perceived resulting in correct positioning of the new plant organ.","definition_xrefs":["GOC:tb","PMID:9611175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ position","termid":"GO:0090706"}


id: GO:0018555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene + NADH + H+ + O2 = NAD+ + cis-3,4-dihydroxy-3,4-dihydrophenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenanthrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018555"}


id: PBO:0071858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 53","termid":"PBO:0071858"}


id: PBO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 83","termid":"PBO:0071081"}


id: GO:0060625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deneddylation, the removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deneddylation","termid":"GO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein deneddylation","secondary_identifiers":["GO:0060626"],"synonyms":[{"name":"regulation of cullin deneddylation","type":"narrow"}],"termid":"GO:0060625"}


id: FYPO:0001072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which myo-inositol import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal myo-inositol import","synonyms":[{"name":"normal myo-inositol import across plasma membrane","type":"exact"},{"name":"normal myo-inositol import during mitotic cell cycle","type":"related"},{"name":"normal myo-inositol import during vegetative growth","type":"exact"},{"name":"normal myo-inositol import into cell","type":"exact"},{"name":"normal myo-inositol uptake","type":"exact"}],"termid":"FYPO:0001072"}


id: PBO:0088543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2","termid":"PBO:0088543"}


id: PBO:0073447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 1","termid":"PBO:0073447"}


id: GO:0000939
data:
  {"annotated_genes":["SJAG_03989","SJAG_01082","SJAG_03220","SJAG_04255","SJAG_04581","SJAG_01228","SJAG_01928","SJAG_04040","SJAG_02513","SJAG_02664","SJAG_03926","SJAG_00350","SJAG_01837","SJAG_04177","SJAG_01278","SJAG_04696","SJAG_00684","SJAG_03619","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85146,85509,94950,101326,103648,106176,108083,109165,110099,110463,111889,112666],"is_not":false,"summary":null,"term":"GO:0000939"},{"annotations":[93563,90288,109502,85148,109052,89885,102165,110101,85511,101327,110537],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"}]},"cv_name":"cellular_component","definition":"The region of a kinetochore closest to centromeric DNA which contains many CENP proteins organized in various subcomplexes including CENP-C, CENP-LN, CENP-HIKM, CENP-OPQUR and CENP-TWSX, but excluding the CENP-A containing heterochromatin.","definition_xrefs":["GOC:clt","PMID:10619130","PMID:11483983","PMID:32516549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00350":null,"SJAG_00684":null,"SJAG_01082":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03220":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04581":null,"SJAG_04696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0000776"],"is_obsolete":false,"name":"inner kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000941"],"synonyms":[{"name":"condensed chromosome inner kinetochore","type":"exact"},{"name":"condensed nuclear chromosome inner kinetochore","type":"exact"},{"name":"inner centromere core complex","type":"related"},{"name":"inner kinetochore of condensed chromosome","type":"exact"},{"name":"inner kinetochore of condensed nuclear chromosome","type":"exact"},{"name":"inner kinetochore plate","type":"narrow"}],"termid":"GO:0000939","terms_by_termid":{"GO:0000939":null,"GO:0031511":null}}


id: GO:0046073
data:
  {"annotated_genes":["SJAG_04627","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84843,104225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTMP metabolism","type":"exact"}],"termid":"GO:0046073","terms_by_termid":{"GO:0006231":null}}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0085313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylethanolamine methyltransferase (PEMT); catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis","termid":"PBO:0085313"}


id: GO:0021585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pons. This process pertains to the physical shaping of a rudimentary structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons structural organization","synonyms":[{"name":"pons structural organisation","type":"exact"}],"termid":"GO:0021585"}


id: GO:1903023
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11405625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of FSM assembly","type":"exact"},{"name":"regulation of FSM biosynthesis","type":"exact"},{"name":"regulation of FSM formation","type":"exact"},{"name":"regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"regulation of forespore membrane biosynthesis","type":"exact"},{"name":"regulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903023","terms_by_termid":{"GO:1903024":null}}


id: GO:1901525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"negative regulation of autophagy of mitochondrion","termid":"GO:1903147"},{"relation_name":"negatively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitophagy","synonyms":[{"name":"down regulation of macromitophagy","type":"exact"},{"name":"down-regulation of macromitophagy","type":"exact"},{"name":"downregulation of macromitophagy","type":"exact"},{"name":"inhibition of macromitophagy","type":"narrow"},{"name":"negative regulation of macromitophagy","type":"exact"}],"termid":"GO:1901525"}


id: PBO:0029117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_process","termid":"PBO:0029117"}


id: GO:0008813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = 4-hydroxybenzoate + pyruvate.","definition_xrefs":["EC:4.1.3.40","RHEA:16505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chorismate lyase activity","secondary_identifiers":["MetaCyc:CHORPYRLY-RXN","KEGG_REACTION:R01302"],"synonyms":[{"name":"4-hydroxybenzoate synthetase activity","type":"exact"},{"name":"CL","type":"related"},{"name":"CPL","type":"related"},{"name":"UbiC","type":"related"},{"name":"chorismate pyruvate lyase activity","type":"exact"},{"name":"chorismate pyruvate-lyase (4-hydroxybenzoate-forming) activity","type":"related"}],"termid":"GO:0008813"}


id: PBO:0089421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex WD repeat subunit Sop2","termid":"PBO:0089421"}


id: FYPO:0004451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to calcium ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to calcium ion","synonyms":[{"name":"decreased protein accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased protein level during cellular response to calcium","type":"exact"},{"name":"decreased protein level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004451"}


id: PBO:0088119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar cation channel; mediates release of Ca(2+) from the vacuole in response to hyperosmotic shock","termid":"PBO:0088119"}


id: GO:0007200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of phospholipase C (PLC) and a subsequent increase in the intracellular concentration of inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:signaling","GOC:dph","GOC:tb","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"PLC-activating GPCR signaling pathway","type":"exact"},{"name":"activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:0007200"}


id: PBO:0067568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 722, pseudogene","termid":"PBO:0067568"}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: GO:1900263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of DNA-directed DNA polymerase activity","termid":"GO:1900262"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"down regulation of DNA duplicase activity","type":"exact"},{"name":"down regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of DNA polymerase I","type":"narrow"},{"name":"down regulation of DNA polymerase II","type":"narrow"},{"name":"down regulation of DNA polymerase III","type":"narrow"},{"name":"down regulation of DNA polymerase V activity","type":"narrow"},{"name":"down regulation of DNA polymerase alpha","type":"narrow"},{"name":"down regulation of DNA polymerase beta","type":"narrow"},{"name":"down regulation of DNA polymerase gamma","type":"narrow"},{"name":"down regulation of DNA replicase activity","type":"exact"},{"name":"down regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down regulation of Klenow fragment","type":"narrow"},{"name":"down regulation of Taq DNA polymerase","type":"narrow"},{"name":"down regulation of Taq Pol I","type":"narrow"},{"name":"down regulation of Tca DNA polymerase","type":"narrow"},{"name":"down regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down regulation of duplicase","type":"broad"},{"name":"down regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down regulation of sequenase","type":"related"},{"name":"down regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of DNA duplicase activity","type":"exact"},{"name":"down-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of DNA polymerase I","type":"narrow"},{"name":"down-regulation of DNA polymerase II","type":"narrow"},{"name":"down-regulation of DNA polymerase III","type":"narrow"},{"name":"down-regulation of DNA polymerase V activity","type":"narrow"},{"name":"down-regulation of DNA polymerase alpha","type":"narrow"},{"name":"down-regulation of DNA polymerase beta","type":"narrow"},{"name":"down-regulation of DNA polymerase gamma","type":"narrow"},{"name":"down-regulation of DNA replicase activity","type":"exact"},{"name":"down-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down-regulation of Klenow fragment","type":"narrow"},{"name":"down-regulation of Taq DNA polymerase","type":"narrow"},{"name":"down-regulation of Taq Pol I","type":"narrow"},{"name":"down-regulation of Tca DNA polymerase","type":"narrow"},{"name":"down-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down-regulation of duplicase","type":"broad"},{"name":"down-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of sequenase","type":"related"},{"name":"down-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"downregulation of DNA duplicase activity","type":"exact"},{"name":"downregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of DNA polymerase I","type":"narrow"},{"name":"downregulation of DNA polymerase II","type":"narrow"},{"name":"downregulation of DNA polymerase III","type":"narrow"},{"name":"downregulation of DNA polymerase V activity","type":"narrow"},{"name":"downregulation of DNA polymerase alpha","type":"narrow"},{"name":"downregulation of DNA polymerase beta","type":"narrow"},{"name":"downregulation of DNA polymerase gamma","type":"narrow"},{"name":"downregulation of DNA replicase activity","type":"exact"},{"name":"downregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"downregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"downregulation of Klenow fragment","type":"narrow"},{"name":"downregulation of Taq DNA polymerase","type":"narrow"},{"name":"downregulation of Taq Pol I","type":"narrow"},{"name":"downregulation of Tca DNA polymerase","type":"narrow"},{"name":"downregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"downregulation of beta DNA polymerase activity","type":"narrow"},{"name":"downregulation of delta DNA polymerase activity","type":"narrow"},{"name":"downregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"downregulation of duplicase","type":"broad"},{"name":"downregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"downregulation of eta DNA polymerase activity","type":"narrow"},{"name":"downregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"downregulation of iota DNA polymerase activity","type":"narrow"},{"name":"downregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"downregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"downregulation of mu DNA polymerase activity","type":"narrow"},{"name":"downregulation of nu DNA polymerase activity","type":"narrow"},{"name":"downregulation of sequenase","type":"related"},{"name":"downregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"downregulation of theta DNA polymerase activity","type":"narrow"},{"name":"downregulation of zeta DNA polymerase activity","type":"narrow"},{"name":"inhibition of DNA duplicase activity","type":"exact"},{"name":"inhibition of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of DNA polymerase I","type":"narrow"},{"name":"inhibition of DNA polymerase II","type":"narrow"},{"name":"inhibition of DNA polymerase III","type":"narrow"},{"name":"inhibition of DNA polymerase V activity","type":"narrow"},{"name":"inhibition of DNA polymerase alpha","type":"narrow"},{"name":"inhibition of DNA polymerase beta","type":"narrow"},{"name":"inhibition of DNA polymerase gamma","type":"narrow"},{"name":"inhibition of DNA replicase activity","type":"exact"},{"name":"inhibition of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"inhibition of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of Klenow fragment","type":"narrow"},{"name":"inhibition of Taq DNA polymerase","type":"narrow"},{"name":"inhibition of Taq Pol I","type":"narrow"},{"name":"inhibition of Tca DNA polymerase","type":"narrow"},{"name":"inhibition of alpha DNA polymerase activity","type":"narrow"},{"name":"inhibition of beta DNA polymerase activity","type":"narrow"},{"name":"inhibition of delta DNA polymerase activity","type":"narrow"},{"name":"inhibition of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic polymerase I","type":"narrow"},{"name":"inhibition of duplicase","type":"broad"},{"name":"inhibition of epsilon DNA polymerase activity","type":"narrow"},{"name":"inhibition of eta DNA polymerase activity","type":"narrow"},{"name":"inhibition of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of iota DNA polymerase activity","type":"narrow"},{"name":"inhibition of kappa DNA polymerase activity","type":"narrow"},{"name":"inhibition of lambda DNA polymerase activity","type":"narrow"},{"name":"inhibition of mu DNA polymerase activity","type":"narrow"},{"name":"inhibition of nu DNA polymerase activity","type":"narrow"},{"name":"inhibition of sequenase","type":"related"},{"name":"inhibition of sigma DNA polymerase activity","type":"narrow"},{"name":"inhibition of theta DNA polymerase activity","type":"narrow"},{"name":"inhibition of zeta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of DNA duplicase activity","type":"exact"},{"name":"negative regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of DNA polymerase I","type":"narrow"},{"name":"negative regulation of DNA polymerase II","type":"narrow"},{"name":"negative regulation of DNA polymerase III","type":"narrow"},{"name":"negative regulation of DNA polymerase V activity","type":"narrow"},{"name":"negative regulation of DNA polymerase alpha","type":"narrow"},{"name":"negative regulation of DNA polymerase beta","type":"narrow"},{"name":"negative regulation of DNA polymerase gamma","type":"narrow"},{"name":"negative regulation of DNA replicase activity","type":"exact"},{"name":"negative regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"negative regulation of Klenow fragment","type":"narrow"},{"name":"negative regulation of Taq DNA polymerase","type":"narrow"},{"name":"negative regulation of Taq Pol I","type":"narrow"},{"name":"negative regulation of Tca DNA polymerase","type":"narrow"},{"name":"negative regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"negative regulation of beta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of delta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"negative regulation of duplicase","type":"broad"},{"name":"negative regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"negative regulation of eta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"negative regulation of iota DNA polymerase activity","type":"narrow"},{"name":"negative regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"negative regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"negative regulation of mu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of nu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of sequenase","type":"related"},{"name":"negative regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"negative regulation of theta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900263"}


id: PBO:0067152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 202, pseudogene","termid":"PBO:0067152"}


id: GO:0051518
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90171,91468,85328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of unidimensional cell growth","termid":"GO:0051512"},{"relation_name":"is_a","term_name":"regulation of bipolar cell growth","termid":"GO:0051516"},{"relation_name":"positively_regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stimulation of bipolar cell growth","type":"narrow"},{"name":"up regulation of bipolar cell growth","type":"exact"},{"name":"up-regulation of bipolar cell growth","type":"exact"},{"name":"upregulation of bipolar cell growth","type":"exact"}],"termid":"GO:0051518","terms_by_termid":{"GO:0051519":null}}


id: PBO:0049106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 161","termid":"PBO:0049106"}


id: PBO:0083536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C","termid":"PBO:0083536"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: PBO:0061928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 2","termid":"PBO:0061928"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: PBO:0110804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WRAP53 orthlog Gnr1","termid":"PBO:0110804"}


id: PBO:0003387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit (predicted)","termid":"PBO:0003387"}


id: GO:0072697
data:
  {"annotated_genes":["SJAG_02228","SJAG_03915","SJAG_04947","SJAG_00279","SJAG_03011","SJAG_04597","SJAG_03602","SJAG_01196","SJAG_00596","SJAG_00333","SJAG_04461","SJAG_04703","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89996],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[94114],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[102980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[112184,86775,110015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[95772,100306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903360"},{"annotations":[86618,101135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[114636,106675,87837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the cell cortex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_01196":null,"SJAG_02228":null,"SJAG_02831":null,"SJAG_03011":null,"SJAG_03602":null,"SJAG_03915":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell cortex","type":"exact"}],"termid":"GO:0072697","terms_by_termid":{"GO:0044379":null,"GO:0071574":null,"GO:0120047":null,"GO:0140325":null,"GO:1903360":null,"GO:1904498":null,"GO:1990896":null}}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: PBO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase Lkh1","termid":"PBO:0000516"}


id: PBO:0083060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoamide acetyltransferase component (E2) of the PDC; the pyruvate dehydrogenase complex (PDC) catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA; metabolic longevity factor required for calorie restriction-mediated life span extension","termid":"PBO:0083060"}


id: GO:0102918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticulinium(1+) + S-adenosyl-L-methionine = (R)-laudanine(1+) + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","RHEA:38907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"(R)-reticuline 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8701","EC:2.1.1.291"],"termid":"GO:0102918"}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: PBO:0076687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4 pseudogene 1","termid":"PBO:0076687"}


id: GO:0032133
data:
  {"annotated_genes":["SJAG_02807","SJAG_01837","SJAG_04412","SJAG_00697"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105058,107790,112663,114676],"is_not":false,"summary":null,"term":"GO:0032133"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved protein complex that localizes to kinetochores in early mitosis, the spindle mid-zone in anaphase B and to the telophase midbody. It has been proposed that the passenger complex coordinates various events based on its location to different structures during the course of mitosis. Complex members include the BIR-domain-containing protein Survivin, Aurora kinase, INCENP and Borealin.","definition_xrefs":["PMID:16824200","PMID:19570910","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00697":null,"SJAG_01837":null,"SJAG_02807":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"chromosome passenger complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CPC","type":"broad"},{"name":"CPC complex","type":"exact"},{"name":"chromosomal passenger complex","type":"exact"}],"termid":"GO:0032133","terms_by_termid":{"GO:0032133":null}}


id: PBO:0082640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glycosylphosphatidylinositol-mannosyltransferase I; essential component; required for the autocatalytic post-translational processing of the protease B precursor Prb1p; localizes to ER in lumenal orientation; homolog of mammalian PIG-X","termid":"PBO:0082640"}


id: PBO:0003501
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.6","termid":"PBO:0003501"}


id: GO:0018355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["RESID:AA0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphoribosyl dephospho-coenzyme A linkage","termid":"GO:0018247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine","termid":"GO:0018355"}


id: PBO:0029337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation","termid":"PBO:0029337"}


id: PBO:0079322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 12","termid":"PBO:0079322"}


id: FYPO:0006585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abolished, and the protein is present in the endoplasmic reticulum instead.","definition_xrefs":["PomBase:mah","PMID:29134248"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to endoplasmic reticulum","termid":"FYPO:0006590"},{"relation_name":"is_a","term_name":"abolished protein localization to shmoo tip","termid":"FYPO:0006505"},{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"},{"relation_name":"is_a","term_name":"protein mislocalized to endoplasmic reticulum","termid":"FYPO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip membrane, with protein mislocalized to endoplasmic reticulum","synonyms":[{"name":"abnormal protein localization to plasma membrane at shmoo tip, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to shmoo membrane fusion domain, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to shmoo projection membrane, with protein mislocalized to endoplasmic reticulum","type":"related"},{"name":"abolished protein localisation to mating projection tip membrane, with protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"abolished protein localization to mating projection tip membrane, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"abolished protein localization to shmoo tip membrane, with protein mislocalized to ER","type":"exact"},{"name":"protein localization to shmoo tip membrane abolished, with protein mislocalized to endoplasmic reticulum","type":"related"}],"termid":"FYPO:0006585"}


id: PBO:0056757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 9","termid":"PBO:0056757"}


id: PBO:0004850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop14 (predicted)","termid":"PBO:0004850"}


id: PBO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Fsv1","termid":"PBO:0000900"}


id: GO:0120299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutaminyl-[protein] = 5-histaminyl-L-glutamyl-[protein].","definition_xrefs":["PMID:23022564","GOC:sp","PMID:23797785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide histaminyltransferase activity","secondary_identifiers":["RHEA:66564"],"termid":"GO:0120299"}


id: PBO:0066004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein non-catalytic subunit beta","termid":"PBO:0066004"}


id: PBO:0087375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ssh1p-Sss1p-Sbh2p complex component; involved in protein translocation into the endoplasmic reticulum; SBH2 has a paralog, SBH1, that arose from the whole genome duplication","termid":"PBO:0087375"}


id: PBO:0038560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 2","termid":"PBO:0038560"}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: PBO:0072842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sin3A associated protein 130","termid":"PBO:0072842"}


id: GO:0032138
data:
  {"annotated_genes":["SJAG_02226","SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101881],"is_not":false,"summary":null,"term":"GO:0032138"},{"annotations":[93848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single base insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"single base insertion or deletion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single base insertion binding","type":"narrow"}],"termid":"GO:0032138","terms_by_termid":{"GO:0032138":null,"GO:0032141":null}}


id: FYPO:0003466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to heat","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to heat","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003466"}


id: PATO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with short, dense, matted hairs.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomentose","termid":"PATO:0002341"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: GO:1904800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron remodeling.","definition_xrefs":["PMID:21609829","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron maturation","termid":"GO:0014043"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"negatively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron remodeling","synonyms":[{"name":"down regulation of axon pruning","type":"narrow"},{"name":"down regulation of neuron remodeling","type":"exact"},{"name":"down regulation of neuronal remodeling","type":"exact"},{"name":"down-regulation of axon pruning","type":"narrow"},{"name":"down-regulation of neuron remodeling","type":"exact"},{"name":"down-regulation of neuronal remodeling","type":"exact"},{"name":"downregulation of axon pruning","type":"narrow"},{"name":"downregulation of neuron remodeling","type":"exact"},{"name":"downregulation of neuronal remodeling","type":"exact"},{"name":"inhibition of axon pruning","type":"narrow"},{"name":"inhibition of neuron remodeling","type":"narrow"},{"name":"inhibition of neuronal remodeling","type":"narrow"},{"name":"negative regulation of axon pruning","type":"narrow"},{"name":"negative regulation of neuron remodelling","type":"exact"},{"name":"negative regulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904800"}


id: GO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome receptor (obsolete GO:0005050)","synonyms":[{"name":"peroxisome receptor","type":"exact"}],"termid":"GO:0005050"}


id: GO:0005967
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA in eukaryotes; includes subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). The This Eukaryotic form usually contains more subunits than its bacterial counterpart; for example, one known complex contains 30 E1 dimers, 60 E2 monomers, and 6 E3 dimers as well as a few copies of pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase.","definition_xrefs":["ISBN:0471331309","GOC:mtg_sensu","ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial pyruvate dehydrogenase complex (obsolete GO:0005967)","synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"broad"}],"termid":"GO:0005967"}


id: GO:0035282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis.","definition_xrefs":["PMID:10611687","PMID:9706689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segmentation","secondary_identifiers":["Wikipedia:Segmentation_(biology)"],"termid":"GO:0035282"}


id: SO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structurally or functionally defined protein region. In proteins with multiple domains, the combination of the domains determines the function of the protein. A region which has been shown to recur throughout evolution.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_domain","secondary_identifiers":["SO:0001069","BS:00012","BS:00134"],"synonyms":[{"name":"domain","type":"broad"},{"name":"polypeptide domain","type":"exact"},{"name":"polypeptide_structural_domain","type":"exact"},{"name":"structural domain","type":"broad"}],"termid":"SO:0000417"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6087882","PMID:6259174","PMID:6667031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: GO:0072523
data:
  {"annotated_genes":["SJAG_00957","SJAG_02369","SJAG_03373","SJAG_06621","SJAG_02135","SJAG_04048","SJAG_00605","SJAG_02945","SJAG_04495","SJAG_03852","SJAG_04334","SJAG_04870","SJAG_02959","SJAG_03828","SJAG_02107","SJAG_04299","SJAG_04297","SJAG_03660","SJAG_03903","SJAG_06622","SJAG_02009","SJAG_01997","SJAG_03091","SJAG_04927","SJAG_04487","SJAG_01310","SJAG_00461","SJAG_02481","SJAG_00633","SJAG_00839","SJAG_04192","SJAG_02247","SJAG_00685","SJAG_05287","SJAG_01359","SJAG_02580","SJAG_05314","SJAG_00027","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83007,83008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[112383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[104775,93657,105251,90622,105252,101624,105253,105248,112353,93938,104778,104780,99408,101238,90118,99140,100237,101236,101625,104776,104779,104781,105249,105250,105254,101237,104777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[94671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[100240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[93853,107464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[111008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[100883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[100885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[85154,110980],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[110037,87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[86131,86556,108076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[110038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019628"},{"annotations":[113355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine-containing compound, i.e. any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01997":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05287":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"purine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine and derivative catabolic process","type":"exact"},{"name":"purine-containing compound breakdown","type":"exact"},{"name":"purine-containing compound catabolism","type":"exact"},{"name":"purine-containing compound degradation","type":"exact"}],"termid":"GO:0072523","terms_by_termid":{"GO:0006096":null,"GO:0006145":null,"GO:0006147":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006742":null,"GO:0009115":null,"GO:0015938":null,"GO:0019628":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901911":null}}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: PBO:0041934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 2","termid":"PBO:0041934"}


id: PBO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk38","termid":"PBO:0005851"}


id: GO:1905884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25849533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acylglycerol transport","termid":"GO:1901507"},{"relation_name":"is_a","term_name":"regulation of triglyceride transport","termid":"GO:1905883"},{"relation_name":"negatively_regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of triglyceride transport","synonyms":[{"name":"down regulation of triacylglycerol transport","type":"exact"},{"name":"down regulation of triglyceride transport","type":"exact"},{"name":"down-regulation of triacylglycerol transport","type":"exact"},{"name":"down-regulation of triglyceride transport","type":"exact"},{"name":"downregulation of triacylglycerol transport","type":"exact"},{"name":"downregulation of triglyceride transport","type":"exact"},{"name":"inhibition of triacylglycerol transport","type":"narrow"},{"name":"inhibition of triglyceride transport","type":"narrow"},{"name":"negative regulation of triacylglycerol transport","type":"exact"}],"termid":"GO:1905884"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: PBO:0059509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block II","termid":"PBO:0059509"}


id: PBO:0062727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 1 pseudogene","termid":"PBO:0062727"}


id: GO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + formate + H+.","definition_xrefs":["RHEA:27282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity","secondary_identifiers":["EC:3.5.1.102"],"termid":"GO:0043729"}


id: PBO:0088111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p","termid":"PBO:0088111"}


id: FYPO:0006975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during meiotic cell cycle","synonyms":[{"name":"transcripts absent from cell during meiotic cell cycle","type":"exact"},{"name":"undetectable cellular RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006975"}


id: _global:molecular_interaction_relation_helper_property
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"_global:interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_interaction_relation_helper_property","secondary_identifiers":["RO:0002564"],"termid":"_global:molecular_interaction_relation_helper_property"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: GO:0004581
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106963],"is_not":false,"summary":null,"term":"GO:0004581"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate.","definition_xrefs":["EC:2.4.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15401","MetaCyc:2.4.1.117-RXN","Reactome:R-HSA-446214"],"synonyms":[{"name":"UDP-glucose dolichyl-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichol phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolicholphosphoryl glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl monophosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"polyprenyl phosphate:UDP-D-glucose glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-dolichol glucosyltransferase activity","type":"related"}],"termid":"GO:0004581","terms_by_termid":{"GO:0004581":null}}


id: PBO:0058689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6817","termid":"PBO:0058689"}


id: PBO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOGT divergent transcript","termid":"PBO:0046382"}


id: PBO:0038505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1","termid":"PBO:0038505"}


id: PBO:0063435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 9","termid":"PBO:0063435"}


id: PBO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0035847"}


id: PBO:0087600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Vps21p-GFP; has potential role in vacuolar function, as suggested by its ability to bind Vac8p; likely member of; Vab2p-GFP-fusion localizes to cytoplasm in punctate pattern","termid":"PBO:0087600"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: PBO:0059388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23 pseudogene 1","termid":"PBO:0059388"}


id: PBO:0083584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcription of both YLL044W and the overlapping gene RPL8B is reduced in the gcr1 null mutant","termid":"PBO:0083584"}


id: PBO:0089960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex telomere binding subunit Rap1","termid":"PBO:0089960"}


id: PBO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit Pka1","termid":"PBO:0003165"}


id: PR:O74800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12383:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.07c","secondary_identifiers":["UniProtKB:O74800"],"synonyms":[{"name":"SPBC2D10.07c","type":"related"},{"name":"Spom972h-IMMP1L","type":"exact"}],"termid":"PR:O74800"}


id: PBO:0070762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 18","termid":"PBO:0070762"}


id: GO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"dynein intermediate chain binding","termid":"GO:0045505"}


id: PBO:0059592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 4","termid":"PBO:0059592"}


id: PBO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase regulatory subunit (predicted)","termid":"PBO:0005691"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: GO:0071369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ethylene stimulus","synonyms":[{"name":"cellular response to ethene stimulus","type":"exact"}],"termid":"GO:0071369"}


id: GO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.","definition_xrefs":["PMID:2455297","RHEA:10628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0140101","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"tRNA nucleotidyltransferase activity","secondary_identifiers":["EC:2.7.7.56","MetaCyc:TRNA-NUCLEOTIDYLTRANSFERASE-RXN"],"synonyms":[{"name":"RNase PH activity","type":"related"},{"name":"phosphate-dependent exonuclease activity","type":"related"},{"name":"ribonuclease PH activity","type":"related"}],"termid":"GO:0009022"}


id: GO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclic ADP-ribose + H20 = ADP-ribose (ADPR).","definition_xrefs":["GOC:pad","GOC:dph","PMID:11866528","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic ADP-ribose hydrolase (obsolete GO:0061812)","termid":"GO:0061812"}


id: GO:0106134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell contraction","termid":"GO:0106134"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: PR:Q9Y7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.04c gene.","definition_xrefs":["UniProtKB:Q9Y7Y3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C365.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.04c","synonyms":[{"name":"Spom972h-SPBC365.04c","type":"exact"}],"termid":"PR:Q9Y7Y3"}


id: PBO:0026753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_hydroxyurea","termid":"PBO:0026753"}


id: PBO:0078174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-5","termid":"PBO:0078174"}


id: GO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + NADP+ = geranial + NADPH.","definition_xrefs":["MetaCyc:GERANIOL-DEHYDROGENASE-RXN","EC:1.1.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"geraniol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1163","RHEA:14521"],"synonyms":[{"name":"geraniol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047924"}


id: PBO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6","termid":"PBO:0090271"}


id: PBO:0086273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a likely role in ribosomal maturation; required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus","termid":"PBO:0086273"}


id: SO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated by polyA priming.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_genomic_polyA_primed_cDNA","termid":"SO:0000415"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_primed_cDNA_clone","synonyms":[{"name":"polyA primed cDNA clone","type":"exact"}],"termid":"SO:0000812"}


id: PBO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: FYPO:0005303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated vegetative cell during cellular response to UV (obsolete FYPO:0005303)","synonyms":[{"name":"elongated cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005303"}


id: GO:0046602
data:
  {"annotated_genes":["SJAG_02520"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046604"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02520":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046602","terms_by_termid":{"GO:0046604":null}}


id: FYPO:0003846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to acetone.","definition_xrefs":["PMID:24727291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to acetone","termid":"FYPO:0003846"}


id: PBO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0000879"}


id: FYPO:0002266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002946","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell wall polysaccharide level","synonyms":[{"name":"decreased cell wall polysaccharide accumulation","type":"related"},{"name":"decreased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall polysaccharide level during vegetative growth","type":"exact"},{"name":"reduced cell wall polysaccharide level","type":"exact"}],"termid":"FYPO:0002266"}


id: GO:0098857
data:
  {"annotated_genes":["SJAG_04001","SJAG_04620","SJAG_03536","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83892,99001,84799,114526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane region with a lipid composition that is distinct from that of the membrane regions that surround it.","definition_xrefs":["PMID:26253820","PMID:20044567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane microdomain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098857","terms_by_termid":{"GO:0044853":null}}


id: GO:0097449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from the soma of an astrocyte and wrapping around neurons.","definition_xrefs":["NIF_Subcellular:sao1630537580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte projection","synonyms":[{"name":"astrocyte process","type":"exact"},{"name":"peripheral astrocyte process","type":"related"},{"name":"vellous process","type":"related"}],"termid":"GO:0097449"}


id: GO:0009861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:jy","PMID:10234273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance","type":"exact"}],"termid":"GO:0009861"}


id: GO:0032488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Cdc42 subfamily relays a signal.","definition_xrefs":["GOC:mah","PMID:18558478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Cdc42 protein signal transduction","synonyms":[{"name":"Cdc42 signaling","type":"related"},{"name":"Cdc42 signaling pathway","type":"related"},{"name":"cdc42 signalling pathway","type":"related"}],"termid":"GO:0032488"}


id: PBO:0070914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 22","termid":"PBO:0070914"}


id: PBO:0064851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 2","termid":"PBO:0064851"}


id: PATO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000976 permeability value (obsolete PATO:0000976)","termid":"PATO:0000976"}


id: PBO:0069789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1075, pseudogene","termid":"PBO:0069789"}


id: PBO:0049441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 18","termid":"PBO:0049441"}


id: GO:0042778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the 3'-terminal CCA of a tRNA is removed and restored. This often happens to uncharged tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA end turnover","termid":"GO:0042778"}


id: GO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation involved in immune response","synonyms":[{"name":"eosinophil activation during immune response","type":"related"}],"termid":"GO:0002278"}


id: PBO:0079343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 27, pseudogene","termid":"PBO:0079343"}


id: PBO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (predicted)","termid":"PBO:0005693"}


id: FYECO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: GO:0097725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 79 of the histone.","definition_xrefs":["GOC:hbye","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 dimethylation (obsolete GO:0097725)","synonyms":[{"name":"histone H3 K79 dimethylation","type":"exact"},{"name":"histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:0097725"}


id: GO:0032486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rap subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rap protein signal transduction","termid":"GO:0032486"}


id: PBO:0049538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 2, pseudogene","termid":"PBO:0049538"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: SO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The more polar, carboxy-terminal region of the signal peptide (approx 3-7 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"c_terminal_region","synonyms":[{"name":"C-region","type":"related"}],"termid":"SO:0100015"}


id: GO:0030450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the classical pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, classical pathway","synonyms":[{"name":"regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0030450"}


id: PBO:0073496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 2","termid":"PBO:0073496"}


id: PBO:0076686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4","termid":"PBO:0076686"}


id: GO:2001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription elongation mediated by RNA polymerase I.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"negative regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001208"}


id: PBO:0005503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific multicopy membrane protein family 1","termid":"PBO:0005503"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: PBO:0017666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Capping enzyme Triphosphatase","termid":"PBO:0017666"}


id: PBO:0026956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_cell_tip","termid":"PBO:0026956"}


id: PBO:0076478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP binding protein","termid":"PBO:0076478"}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["GOC:mah","PMID:12571227","PMID:15709772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"molybdopterin synthase complex","secondary_identifiers":["GO:0019009"],"synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: PBO:0073690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 3","termid":"PBO:0073690"}


id: GO:1990095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:kmv","PMID:16166371"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (obsolete GO:1990095)","termid":"GO:1990095"}


id: PATO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000302 relative speed value (obsolete PATO:0000302)","termid":"PATO:0000302"}


id: PBO:0062944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 2","termid":"PBO:0062944"}


id: PBO:0072019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 6","termid":"PBO:0072019"}


id: PBO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binding Upb Nine of 107 kDa","termid":"PBO:0000347"}


id: PBO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_plasma_membrane_permeability","termid":"PBO:0036192"}


id: GO:1905136
data:
  {"annotated_genes":["SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87563],"is_not":false,"summary":null,"term":"GO:1905136"}]},"cv_name":"biological_process","definition":"The directed movement of dethiobiotin from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044757","GO:1901690"],"synonyms":[{"name":"dethiobiotin import","type":"related"},{"name":"dethiobiotin import into cell","type":"exact"}],"termid":"GO:1905136","terms_by_termid":{"GO:1905136":null}}


id: PBO:0076290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin III","termid":"PBO:0076290"}


id: GO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-acetamidobutanoyl-CoA + H2O = 4-aminobutanoyl-CoA + acetate.","definition_xrefs":["RHEA:22928","EC:3.5.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824","GO:0019213"],"is_obsolete":false,"name":"4-acetamidobutyryl-CoA deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04056","MetaCyc:4-ACETAMIDOBUTYRYL-COA-DEACETYLASE-RXN"],"synonyms":[{"name":"4-acetamidobutanoyl-CoA amidohydrolase activity","type":"related"},{"name":"aminobutyryl-CoA thiolesterase activity","type":"related"},{"name":"deacetylase-thiolesterase activity","type":"related"}],"termid":"GO:0047574"}


id: PBO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1","termid":"PBO:0061751"}


id: PBO:0028124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_pear-shaped_vegetative_cell","termid":"PBO:0028124"}


id: GO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of stimuli and a neurological response.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"blood pressure regulation by neurological process","type":"exact"},{"name":"fast control of arterial pressure","type":"related"},{"name":"neurological process involved in regulation of systemic arterial blood pressure","type":"exact"},{"name":"neurological system process involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001976"}


id: GO:0038142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated epidermal growth factor receptor (EGFR/ERBB1). ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["Reactome:R-HSA-1227939","Reactome:R-HSA-1963589","GOC:signaling","PMID:16460914","Reactome:R-HSA-1963573","PMID:1973074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"EGFR:ERBB2 complex","synonyms":[{"name":"EGF:EGFR:ERBB2 complex","type":"narrow"},{"name":"EGFR:ERBB2 heterodimer","type":"related"}],"termid":"GO:0038142"}


id: GO:0080015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = sabinene + diphosphate.","definition_xrefs":["PMID:9747540","PMID:12566586","MetaCyc:RXN-5103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sabinene synthase activity","secondary_identifiers":["EC:4.2.3.-"],"termid":"GO:0080015"}


id: PATO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000009 absolute speed (obsolete PATO:0000009)","termid":"PATO:0000009"}


id: PBO:0087853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; involved in regulation of invertase and glucoamylase expression, invasive growth and pseudohyphal differentiation, iron uptake, chromium accumulation, and response to osmotic stress; localizes to the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087853"}


id: SO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where there is no resulting change to the encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous_variant","secondary_identifiers":["SO:0001588","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://en.wikipedia.org/wiki/Silent_mutation","http://snpeff.sourceforge.net/SnpEff_manual.html","http://en.wikipedia.org/wiki/Synonymous_mutation","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"ANNOVAR:synonymous SNV","type":"related"},{"name":"Jannovar:synonymous_variant","type":"exact"},{"name":"Seattleseq:synonymous","type":"exact"},{"name":"Seattleseq:synonymous-near-splice","type":"related"},{"name":"VAAST:synonymous_codon","type":"exact"},{"name":"VAAST:synonymous_variant","type":"exact"},{"name":"VAT:synonymous","type":"exact"},{"name":"VEP:synonymous_variant","type":"exact"},{"name":"coding-synon","type":"exact"},{"name":"silent mutation","type":"related"},{"name":"silent substitution","type":"related"},{"name":"silent_mutation","type":"related"},{"name":"snpEff:SYNONYMOUS_CODING","type":"exact"},{"name":"synonymous codon","type":"exact"},{"name":"synonymous_coding","type":"exact"},{"name":"synonymous_codon","type":"exact"}],"termid":"SO:0001819"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["PMID:10521503","GOC:krc","PMID:22809326","PMID:29367433","GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: PBO:0051754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 3","termid":"PBO:0051754"}


id: PBO:0083257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components","termid":"PBO:0083257"}


id: PBO:0090755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7, Pre4","termid":"PBO:0090755"}


id: GO:0033505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the floor plate is generated and organized.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"floor plate development","termid":"GO:0033504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate morphogenesis","termid":"GO:0033505"}


id: GO:0160009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] = (2E)-2-butenoate + L-lysyl-[histone].","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"},{"relation_name":"is_a","term_name":"protein decrotonylase activity","termid":"GO:0160008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"histone decrotonylase activity","termid":"GO:0160009"}


id: GO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of cell death in a neuron.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron death (obsolete GO:0070997)","synonyms":[{"name":"neuron cell death","type":"exact"},{"name":"neuronal cell death","type":"exact"}],"termid":"GO:0070997"}


id: GO:1903175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty alcohol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000068","PMID:24036493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty alcohol biosynthetic process","synonyms":[{"name":"fatty alcohol anabolism","type":"exact"},{"name":"fatty alcohol biosynthesis","type":"exact"},{"name":"fatty alcohol formation","type":"exact"},{"name":"fatty alcohol synthesis","type":"exact"}],"termid":"GO:1903175"}


id: GO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.","definition_xrefs":["PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle maturation","termid":"GO:0016188"}


id: GO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"macropinocytosis","secondary_identifiers":["GO:1902538"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism macropinocytosis","type":"related"}],"termid":"GO:0044351"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: GO:0008295
data:
  {"annotated_genes":["SJAG_04481","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98489,109320],"is_not":false,"summary":null,"term":"GO:0008295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BSUBPOLYAMSYN-PWY","MetaCyc:POLYAMINSYN3-PWY"],"synonyms":[{"name":"spermidine anabolism","type":"exact"},{"name":"spermidine biosynthesis","type":"exact"},{"name":"spermidine formation","type":"exact"},{"name":"spermidine synthesis","type":"exact"}],"termid":"GO:0008295","terms_by_termid":{"GO:0008295":null}}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["GO:0006514"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: PBO:0064606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 4","termid":"PBO:0064606"}


id: PBO:0031554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptidase_activity","termid":"PBO:0031554"}


id: GO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex (plastoquinone)","termid":"GO:0010598"}


id: FYPO:0006109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from subtelomeric regions are present at greater levels than normal.","definition_xrefs":["PMID:28404620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased subtelomeric transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to subtelomeres","type":"related"},{"name":"increased accumulation of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased level of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased subtelomere transcript-derived siRNA level","type":"exact"},{"name":"increased subtelomeric transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased subtelomeric transcript-derived siRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006109"}


id: GO:0009859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which water is taken up by pollen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pollen hydration","termid":"GO:0009859"}


id: GO:0090233
data:
  {"annotated_genes":["SJAG_04259","SJAG_03126","SJAG_03681","SJAG_01297","SJAG_01679","SJAG_02169","SJAG_00883","SJAG_02336","SJAG_02451","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86202,95264,109746,104100,99663,110235,107860,111894,103052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"negatively_regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"negative regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle checkpoint silencing","type":"narrow"}],"termid":"GO:0090233","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: FYPO:0000961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on sorbitol","synonyms":[{"name":"normal cell population growth in presence of sorbitol","type":"exact"},{"name":"normal cell population growth on glucitol","type":"exact"},{"name":"normal cell population growth on sorbitol","type":"exact"},{"name":"normal cellular response to sorbitol","type":"related"},{"name":"normal vegetative cell population growth on sorbitol","type":"exact"}],"termid":"FYPO:0000961"}


id: PBO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP dependent ribosome recycling factor mitochondrial 2","termid":"PBO:0048550"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: GO:1900269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reverse transcription","termid":"GO:1900268"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of reverse transcription","synonyms":[{"name":"down regulation of reverse transcription","type":"exact"},{"name":"down-regulation of reverse transcription","type":"exact"},{"name":"downregulation of reverse transcription","type":"exact"},{"name":"inhibition of reverse transcription","type":"narrow"}],"termid":"GO:1900269"}


id: GO:0008707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = 1-myo-inositol 1,2,3,4,5-pentakisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-phytase activity","secondary_identifiers":["MetaCyc:RXN-7241","RHEA:20960"],"synonyms":[{"name":"6-phytase (name based on 1L-numbering system and not 1D-numbering)","type":"broad"},{"name":"6-phytase activity","type":"exact"},{"name":"myo-inositol-hexakisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"phytase activity","type":"broad"},{"name":"phytate 6-phosphatase activity","type":"related"}],"termid":"GO:0008707"}


id: PR:O74348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21D10.08c gene.","definition_xrefs":["UniProtKB:O74348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21D10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.08c","synonyms":[{"name":"Spom972h-SPBC21D10.08c","type":"exact"}],"termid":"PR:O74348"}


id: PBO:0029808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029808"}


id: GO:0042407
data:
  {"annotated_genes":["SJAG_02501","SJAG_05241","SJAG_04237","SJAG_02028","SJAG_02002"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97424,103139,105888,110610,113786],"is_not":false,"summary":null,"term":"GO:0042407"}]},"cv_name":"biological_process","definition":"The assembly of cristae, the inwards folds of the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_04237":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"cristae formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042407","terms_by_termid":{"GO:0042407":null}}


id: PBO:0066151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 7","termid":"PBO:0066151"}


id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: GO:0033892
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage near pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["EC:3.1.25.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific endodeoxyribonuclease activity, specific for altered base","termid":"GO:0016890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.25.1-RXN"],"synonyms":[{"name":"T4 endonuclease V activity","type":"related"},{"name":"bacteriophage T4 endodeoxyribonuclease V activity","type":"related"},{"name":"endodeoxyribonuclease (pyrimidine dimer) activity","type":"related"}],"termid":"GO:0033892","terms_by_termid":{"GO:1990043":null}}


id: PBO:0054070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1418","termid":"PBO:0054070"}


id: PBO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap104","termid":"PBO:0002294"}


id: PBO:0108705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Hba1","termid":"PBO:0108705"}


id: PBO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL2 antisense RNA 1","termid":"PBO:0047768"}


id: PBO:0080612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 46","termid":"PBO:0080612"}


id: FYPO:0006150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing etoposide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on etoposide","synonyms":[{"name":"normal cell population growth in presence of etoposide","type":"exact"},{"name":"normal cell population growth on etoposide","type":"exact"},{"name":"normal cellular response to etoposide","type":"related"},{"name":"normal vegetative cell population growth on etoposide","type":"exact"}],"termid":"FYPO:0006150"}


id: PBO:0058902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12120","termid":"PBO:0058902"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: GO:1900256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of beta1-adrenergic receptor activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of beta1-adrenergic receptor activity (obsolete GO:1900256)","synonyms":[{"name":"regulation of beta1 adrenoceptor","type":"exact"}],"termid":"GO:1900256"}


id: SO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyl_2_selenouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyl_two_selenouridine","secondary_identifiers":["RNAMOD:074"],"synonyms":[{"name":"5-methylaminomethyl-2-selenouridine","type":"exact"},{"name":"five methylaminomethyl two selenouridine","type":"exact"},{"name":"mnm5se2U","type":"exact"}],"termid":"SO:0001366"}


id: GO:0052798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of sialyl residues alpha-2,3-linked to a beta galactosyl residue on the donor to form an alpha-2,3 linkage to a terminal beta galactosyl residue on the acceptor.","definition_xrefs":["PMID:8405811","GOC:mengo_curators","PMID:7826016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"beta-galactoside alpha-2,3-sialyltransferase activity","synonyms":[{"name":"trans-sialidase activity","type":"broad"}],"termid":"GO:0052798"}


id: FYPO:0003897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal during a cellular response to reactive oxygen species.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"mitochondrial aggregation during cellular response to reactive oxygen species","synonyms":[{"name":"aggregated mitochondria during cellular response to reactive oxygen species","type":"narrow"},{"name":"mitochondrial aggregation at cell end during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation at cell tip during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation during cellular response to ROS","type":"exact"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during vegetative growth","type":"exact"}],"termid":"FYPO:0003897"}


id: GO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-methylthiopropyl glucosinolate S-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-2221"],"termid":"GO:0080102"}


id: PATO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female fertility","termid":"PATO:0000277"}


id: PBO:0091589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A) bearing, possible SPAC22E12.02 UTR","termid":"PBO:0091589"}


id: GO:1903127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:24554434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centriole-centriole cohesion","synonyms":[{"name":"activation of centriole-centriole cohesion","type":"narrow"},{"name":"up regulation of centriole-centriole cohesion","type":"exact"},{"name":"up-regulation of centriole-centriole cohesion","type":"exact"},{"name":"upregulation of centriole-centriole cohesion","type":"exact"}],"termid":"GO:1903127"}


id: PBO:0025491
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cockayne syndrome","termid":"PBO:0025491"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["GOC:jid","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0002131"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: PBO:0087721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087721"}


id: GO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"activation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"stimulation of amino acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"up-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"upregulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051943"}


id: GO:1990912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.","definition_xrefs":["PMID:21241601"],"gene_count":0,"genotype_count":0,"name":"obsolete response to microwave radiation (obsolete GO:1990912)","termid":"GO:1990912"}


id: FYPO:0003126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable post-anaphase array of microtubules.","definition_xrefs":["PMID:24006493","PMID:9601091","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"post-anaphase array absent from cell","synonyms":[{"name":"PAA absent from cell","type":"exact"},{"name":"absent post-anaphase array","type":"exact"},{"name":"post-anaphase array absent from cell during mitotic cell cycle","type":"related"},{"name":"post-anaphase array absent from cell during vegetative growth","type":"exact"},{"name":"post-anaphase microtubule array absent from cell","type":"exact"}],"termid":"FYPO:0003126"}


id: GO:0033518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate group from myo-inositol hexakisphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol hexakisphosphate dephosphorylation (obsolete GO:0033518)","synonyms":[{"name":"phytate dephosphorylation","type":"exact"}],"termid":"GO:0033518"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: PBO:0055173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2597","termid":"PBO:0055173"}


id: FYECO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which inositol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ inositol","termid":"FYECO:0000064"}


id: PBO:0052132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 4","termid":"PBO:0052132"}


id: PBO:0062969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 12","termid":"PBO:0062969"}


id: GO:1904072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a presynaptic active zone into its constituent components.","definition_xrefs":["ISBN:9780387325606","GOC:TermGenie","GO_REF:0000079","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone disassembly","synonyms":[{"name":"pre-synaptic active zone component disassembly","type":"narrow"},{"name":"pre-synaptic active zone disassembly","type":"exact"}],"termid":"GO:1904072"}


id: MOD:00377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphouridine through a phosphoramide ester bond to form 1'-(phospho-5'-uridine)-L-histidine.","definition_xrefs":["Unimod:417#H","PubMed:11467524","PubMed:380639","PubMed:8794735","RESID:AA0372","PubMed:321007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-uridine)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(5'-uridine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-uridine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-UMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-uridine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-uridylic acid","type":"exact"},{"name":"MOD_RES O-UMP-histidine","type":"exact"},{"name":"N(tau)-5'-uridylic-L-histidine","type":"exact"},{"name":"N1'-uridylylated histidine","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"tele-5'-uridylic-L-histidine","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00377"}


id: GO:0102947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-delta-cadinene + NADPH + O2 = 8-hydroxy-(+)-delta-cadinene + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-delta-cadinene-8-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9045"],"termid":"GO:0102947"}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["Reactome:R-HSA-1008248","MetaCyc:2.7.4.10-RXN","RHEA:13749"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: PBO:0056702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3","termid":"PBO:0056702"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: PR:O94539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pam17 gene.","definition_xrefs":["UniProtKB:O94539","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocated-associated motor subunit pam17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.04","synonyms":[{"name":"Spom972h-pam17","type":"exact"}],"termid":"PR:O94539"}


id: PBO:0082841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed acid phosphatase similar to Pho5p; brought to the cell surface by transport vesicles; hydrolyzes thiamin phosphates in the periplasmic space, increasing cellular thiamin uptake; expression is repressed by thiamin","termid":"PBO:0082841"}


id: PBO:0041400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 52","termid":"PBO:0041400"}


id: PBO:0027593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027593"}


id: PBO:0017973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein involved in microtubule-based process Ber1 (predicted)","termid":"PBO:0017973"}


id: GO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin-metal-sulfur complex formation","synonyms":[{"name":"HWM phytochelatin complex formation","type":"related"},{"name":"high molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090424"}


id: PR:Q10326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug8 gene.","definition_xrefs":["UniProtKB:Q10326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 8 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.01","synonyms":[{"name":"Spom972h-mug8","type":"exact"}],"termid":"PR:Q10326"}


id: PBO:0057707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1294","termid":"PBO:0057707"}


id: GO:0043713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoisocaproate + NADH + H+ = (R)-2-hydroxyisocaproate + NAD+.","definition_xrefs":["PMID:16957230","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-2-hydroxyisocaproate dehydrogenase activity","termid":"GO:0043713"}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: PBO:0083377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W","termid":"PBO:0083377"}


id: PBO:0079368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 2","termid":"PBO:0079368"}


id: PBO:0043832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4","termid":"PBO:0043832"}


id: PBO:0088371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring-membrane anchor Fic1","termid":"PBO:0088371"}


id: PBO:0089669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPI,II,III complex subunit Trs33","termid":"PBO:0089669"}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: PBO:0017027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat Mark1","termid":"PBO:0017027"}


id: GO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the activin family to its receptor on the surface of a target cell, and contributing to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart","GOC:signaling","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activin receptor signaling pathway involved in heart jogging (obsolete GO:0061372)","synonyms":[{"name":"activin receptor signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0061372"}


id: PBO:0091557
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by misassembly of the cosmid","termid":"PBO:0091557"}


id: SO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Archaeosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaeosine","secondary_identifiers":["RNAMOD:049"],"synonyms":[{"name":"G+","type":"exact"}],"termid":"SO:0001323"}


id: PBO:0082748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; involved in telomere maintenance; RSC2 has a paralog, RSC1, that arose from the whole genome duplication","termid":"PBO:0082748"}


id: PBO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC1 upstream transcript","termid":"PBO:0047777"}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["PMID:11282471","GOC:jl","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: GO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within a histone protein that takes place during, and results in a modification pattern characteristic of, S phase of the cell cycle.","definition_xrefs":["GOC:mah","PMID:9990026"],"gene_count":0,"genotype_count":0,"name":"obsolete S phase-specific histone modification (obsolete GO:0006324)","synonyms":[{"name":"S phase-specific histone modification","type":"exact"},{"name":"S-phase-specific histone modification","type":"exact"}],"termid":"GO:0006324"}


id: SO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element that acts in response to a stimulus, usually via transcription factor binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:response_element","type":"exact"},{"name":"response element","type":"exact"}],"termid":"SO:0002205"}


id: FYPO:0006633
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115252,115530,115264],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115333],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta","pka1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0006633","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: GO:0106050
data:
  {"annotated_genes":["SJAG_01269","SJAG_01375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86428,93513],"is_not":false,"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing a 2'-O-nucleotide.","definition_xrefs":["PMID:17242307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_01375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6788668","Reactome:R-HSA-9024159","Reactome:R-HSA-6788684"],"termid":"GO:0106050","terms_by_termid":{"GO:0106050":null}}


id: PBO:0090264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP for Rho1, Rga1","termid":"PBO:0090264"}


id: MOD:00184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175","PubMed:9033387","PubMed:2076468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3-bromophenyl)propanoic acid","type":"exact"},{"name":"3'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-3'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"m-bromophenylalanine","type":"exact"},{"name":"meta-bromophenylalanine","type":"exact"}],"termid":"MOD:00184"}


id: SO:1000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An umbrella term for terms describing an effect of a sequence variation on the frame of translation.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000064 sequence_variation_affecting_reading_frame (obsolete SO:1000064)","synonyms":[{"name":"mutation affecting reading frame","type":"exact"},{"name":"sequence variation affecting reading frame","type":"related"}],"termid":"SO:1000064"}


id: PBO:0085833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; msc3 mutants are defective in directing meiotic recombination events to homologous chromatids; potential Cdc28p substrate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085833"}


id: GO:2000334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"positively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood microparticle formation","synonyms":[{"name":"positive regulation of microparticle generation","type":"exact"},{"name":"positive regulation of microparticle release","type":"exact"}],"termid":"GO:2000334"}


id: GO:0015762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which rhamnose is transported across a lipid bilayer, from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"rhamnose transmembrane transport","synonyms":[{"name":"rhamnose transport","type":"related"}],"termid":"GO:0015762"}


id: PBO:0109351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA sno530","termid":"PBO:0109351"}


id: PBO:0030610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level","termid":"PBO:0030610"}


id: GO:0004516
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84476],"is_not":false,"summary":null,"term":"GO:0004516"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinate.","definition_xrefs":["PMID:7503993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.4.21","Reactome:R-HSA-197186","MetaCyc:NICOTINATEPRIBOSYLTRANS-RXN","KEGG_REACTION:R01724","RHEA:36163"],"synonyms":[{"name":"niacin ribonucleotidase activity","type":"related"},{"name":"nicotinate-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"nicotinic acid mononucleotide glycohydrolase activity","type":"related"},{"name":"nicotinic acid mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinic acid phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004516","terms_by_termid":{"GO:0004516":null}}


id: GO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the kidney along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in kidney development","synonyms":[{"name":"anterior/posterior pattern formation involved in kidney development","type":"related"},{"name":"kidney anterior/posterior pattern formation","type":"related"},{"name":"kidney anterior/posterior pattern specification","type":"exact"}],"termid":"GO:0072098"}


id: PBO:0091259
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CLA4","termid":"PBO:0091259"}


id: FYPO:0002611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at subtelomeric regions during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation at subtelomere during mitotic S phase","type":"exact"},{"name":"decreased histone H2A phosphorylation at subtelomeric heterochromatin during S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase","type":"exact"}],"termid":"FYPO:0002611"}


id: GO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + H+ + NADPH + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + H2O + NADP+.","definition_xrefs":["PMID:1400444","PMID:10051404","RHEA:46752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 12-alpha-hydroxylase activity","termid":"GO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"7alpha-hydroxycholest-4-en-3-one 12alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R04826","Reactome:R-HSA-193709","Reactome:R-HSA-192157","Reactome:R-HSA-193845","MetaCyc:1.14.13.95-RXN"],"synonyms":[{"name":"7alpha-hydroxy-4-cholesten-3-one 12alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033778"}


id: GO:1903683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"positively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"activation of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"},{"name":"up regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"up-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"upregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"}],"termid":"GO:1903683"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: PBO:0057360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ad","termid":"PBO:0057360"}


id: PBO:0072092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 23","termid":"PBO:0072092"}


id: PBO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Grt1 (predicted)","termid":"PBO:0003028"}


id: GO:1990556
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83859],"is_not":false,"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-isopropylmalate(2-) transmembrane transport","termid":"GO:1902357"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial isopropylmalate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990556","terms_by_termid":{"GO:1990556":null}}


id: FYPO:0005152
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115582],"is_not":false,"summary":null,"term":"FYPO:0005152"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caspofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"resistance to caspofungin during mitotic cell cycle","type":"related"},{"name":"resistance to caspofungin during vegetative growth","type":"exact"},{"name":"resistant to caspofungin","type":"exact"}],"termid":"FYPO:0005152","terms_by_termid":{"FYPO:0005152":null,"FYPO_EXT:0000002":null}}


id: GO:1900863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"},{"relation_name":"positively_regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cordyol C biosynthetic process","synonyms":[{"name":"activation of cordyol C biosynthetic process","type":"narrow"},{"name":"up regulation of cordyol C biosynthetic process","type":"exact"},{"name":"up-regulation of cordyol C biosynthetic process","type":"exact"},{"name":"upregulation of cordyol C biosynthetic process","type":"exact"}],"termid":"GO:1900863"}


id: GO:0047761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + butanoate = ADP + butanoyl phosphate + H+.","definition_xrefs":["EC:2.7.2.7","RHEA:13585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"butyrate kinase activity","secondary_identifiers":["MetaCyc:BUTYRATE-KINASE-RXN","KEGG_REACTION:R01688"],"synonyms":[{"name":"ATP:butanoate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0047761"}


id: PBO:0036068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_during_anaphase_B","termid":"PBO:0036068"}


id: GO:0110118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of photoreceptor cell differentiation","termid":"GO:0046533"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"negatively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"}


id: GO:0044827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral genome replication","synonyms":[{"name":"regulation by host of viral genome reproduction","type":"exact"}],"termid":"GO:0044827"}


id: FYPO:0003711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable Skb1-containing lateral cortical nodes.","definition_xrefs":["PMID:25009287","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"lateral cortical nodes absent from cell","synonyms":[{"name":"Skb1-containing cortical nodes absent from cell","type":"exact"},{"name":"absent lateral cortical nodes","type":"exact"},{"name":"lateral cortical nodes absent from cell during mitotic cell cycle","type":"related"},{"name":"lateral cortical nodes absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003711"}


id: GO:0102585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside + malonyl-CoA + H+ = cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + coenzyme A.","definition_xrefs":["PMID:17292360","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15331"],"termid":"GO:0102585"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: PBO:0067002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 6, pseudogene","termid":"PBO:0067002"}


id: FYPO:0002714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the Golgi apparatus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to Golgi apparatus","synonyms":[{"name":"ectopic protein localization to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus during vegetative growth","type":"exact"},{"name":"protein mislocalized to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002714"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: PBO:0060902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 1","termid":"PBO:0060902"}


id: PBO:0082773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p","termid":"PBO:0082773"}


id: PBO:0046895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20B glycosaminoglycan xylosylkinase","termid":"PBO:0046895"}


id: PBO:0016043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat PTBP3","termid":"PBO:0016043"}


id: FYECO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping condition combinations","termid":"FYECO:0000238"}


id: PBO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.3.3","termid":"PBO:0005617"}


id: GO:1904694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","PMID:22158624","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"is_a","term_name":"negative regulation of vasoconstriction","termid":"GO:0045906"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"down regulation of vascular smooth muscle contraction","type":"exact"},{"name":"down-regulation of vascular smooth muscle contraction","type":"exact"},{"name":"downregulation of vascular smooth muscle contraction","type":"exact"},{"name":"inhibition of vascular smooth muscle contraction","type":"narrow"},{"name":"negative regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:1904694"}


id: GO:0019610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"3-hydroxyphenylacetate metabolic process","termid":"GO:0019609"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate catabolic process","secondary_identifiers":["MetaCyc:3-HYDROXYPHENYLACETATE-DEGRADATION-PWY"],"synonyms":[{"name":"3-hydroxyphenylacetate breakdown","type":"exact"},{"name":"3-hydroxyphenylacetate catabolism","type":"exact"},{"name":"3-hydroxyphenylacetate degradation","type":"exact"}],"termid":"GO:0019610"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: GO:0017192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of a glutamine residue in protein to form the N5-methyl-L-glutamine derivative. The occurrence of this modification has not been confirmed. Its annotation in sequence databases is either due to the misidentification of 2-pyrrolidone-5-carboxylic acid, or to inappropriate homolog comparisons when proteolytic modification is more probable.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glutamine acetylation","termid":"GO:0017192"}


id: PR:O94272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-aminobutyric acid receptor-associated protein-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.24c","secondary_identifiers":["UniProtKB:O94272"],"synonyms":[{"name":"Spom972h-GABARAPL2","type":"exact"},{"name":"autophagy-related ubiquitin-like modifier atg8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94272"}


id: GO:1900839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"positively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"up regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"up-regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"upregulation of fumigaclavine C biosynthetic process","type":"exact"}],"termid":"GO:1900839"}


id: PBO:0111892
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain","termid":"PBO:0111892"}


id: GO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c3 (tetraheme) (obsolete GO:0009472)","synonyms":[{"name":"cytochrome c3 (tetraheme)","type":"exact"}],"termid":"GO:0009472"}


id: PBO:0077864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 5","termid":"PBO:0077864"}


id: PBO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 11","termid":"PBO:0045142"}


id: GO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["PMID:22864417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem loading","termid":"GO:0110126"},{"relation_name":"is_a","term_name":"glucosinolate transport","termid":"GO:1901349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phloem glucosinolate loading","termid":"GO:0090449"}


id: GO:0006199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP reduction (obsolete GO:0006199)","synonyms":[{"name":"ADP reduction","type":"exact"}],"termid":"GO:0006199"}


id: PBO:0044773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 55","termid":"PBO:0044773"}


id: PBO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL14 pseudogene 6","termid":"PBO:0070868"}


id: PR:Q9Y7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.08c","secondary_identifiers":["UniProtKB:Q9Y7R8"],"synonyms":[{"name":"Spom972h-MDH2","type":"exact"}],"termid":"PR:Q9Y7R8"}


id: GO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic M phase","synonyms":[{"name":"M phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051327"}


id: GO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["PMID:10970777","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(5'-nucleosidyl) oligophosphate metabolic process","termid":"GO:0015956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate biosynthetic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate anabolism","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate biosynthesis","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate formation","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate synthesis","type":"exact"}],"termid":"GO:0015957"}


id: PBO:0062731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 5 pseudogene","termid":"PBO:0062731"}


id: GO:0032386
data:
  {"annotated_genes":["SJAG_04597","SJAG_03048","SJAG_04509","SJAG_04312","SJAG_01245","SJAG_01805","SJAG_03453","SJAG_03338","SJAG_00906","SJAG_01166","SJAG_00028","SJAG_01311","SJAG_04464","SJAG_02592","SJAG_04343"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105279,84691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001136"},{"annotations":[101614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[90001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[104581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[97573,89392,96140,106884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[98111,86335,89958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[83332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[107539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[87519,83336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00906":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03338":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032386","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0060628":null,"GO:0070863":null,"GO:1902854":null,"GO:2001135":null,"GO:2001136":null}}


id: FYPO:0002349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly begins later than normal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of stress granule assembly during vegetative growth","synonyms":[{"name":"delayed onset of cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"delayed onset of stress granule assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of stress granule formation during vegetative growth","type":"exact"},{"name":"delayed stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002349"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: PBO:0049104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 1","termid":"PBO:0049104"}


id: GO:0019862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgA isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgA binding","termid":"GO:0019862"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: GO:1900124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["PMID:15062104","GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of nodal receptor complex assembly","termid":"GO:1900123"},{"relation_name":"negatively_regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of nodal receptor complex assembly","synonyms":[{"name":"down regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down regulation of nodal receptor complex assembly","type":"exact"},{"name":"down regulation of nodal receptor complex formation","type":"exact"},{"name":"down-regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down-regulation of nodal receptor complex assembly","type":"exact"},{"name":"down-regulation of nodal receptor complex formation","type":"exact"},{"name":"downregulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"downregulation of nodal receptor complex assembly","type":"exact"},{"name":"downregulation of nodal receptor complex formation","type":"exact"},{"name":"inhibition of ActRIIB.ALK4.EGF-CFC complex formation","type":"narrow"},{"name":"inhibition of nodal receptor complex assembly","type":"narrow"},{"name":"inhibition of nodal receptor complex formation","type":"narrow"},{"name":"negative regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"negative regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900124"}


id: GO:0047932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine + acetyl-CoA = N-acetyl-D-glucosamine + CoA + H+.","definition_xrefs":["EC:2.3.1.3","RHEA:21332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"glucosamine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01204","MetaCyc:GLUCOSAMINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:D-glucosamine N-acetyltransferase activity","type":"related"},{"name":"glucosamine acetylase activity","type":"related"},{"name":"glucosamine acetyltransferase activity","type":"related"}],"termid":"GO:0047932"}


id: PBO:0053370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 293","termid":"PBO:0053370"}


id: GO:0061093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:jh","GOC:tb","GOC:dph","PMID:19966303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid transport","termid":"GO:2001139"},{"relation_name":"negatively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"negative regulation of phospholipid translocation","termid":"GO:0061093"}


id: PBO:0060447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD synthetase 1","termid":"PBO:0060447"}


id: GO:0102286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithinium(1+) = N(5)-acetyl-L-ornithine.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ornithine N-delta-acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12667"],"termid":"GO:0102286"}


id: FYPO:0006659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during the G1/S transition of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitotic G1/S transition","synonyms":[{"name":"delayed onset of protein phosphorylation during G1/S transition of mitotic cell cycle","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic G1/S transition during vegetative growth","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during mitotic G1/S transition","type":"exact"},{"name":"delayed protein phosphorylation during mitotic G1/S transition","type":"exact"}],"termid":"FYPO:0006659"}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: FYPO:0006314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which formation of the ascus, the sac-like structure that encloses spores, does not occur.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus development","termid":"FYPO:0000680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000680"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000680","FYPO:0001985"],"is_obsolete":false,"name":"abolished ascus formation","synonyms":[{"name":"abolished ascus development","type":"related"},{"name":"abolished asci formation","type":"exact"}],"termid":"FYPO:0006314"}


id: GO:0090390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion, and occurs as a part of apoptotic cell clearance.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome acidification","termid":"GO:0090383"},{"relation_name":"part_of","term_name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"phagosome acidification involved in apoptotic cell clearance","termid":"GO:0090390"}


id: PBO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase, translation initiation factor eIF-3 gamma subunit Gcd10 (predicted)","termid":"PBO:0003112"}


id: PBO:0057192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 365a","termid":"PBO:0057192"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_03092","SJAG_01777","SJAG_01601","SJAG_01067","SJAG_01837","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112674],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[100873,85229,94814,101755,112876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: PBO:0075595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 2","termid":"PBO:0075595"}


id: PBO:0049631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 34","termid":"PBO:0049631"}


id: PBO:0086206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress; homolog of human TPT1","termid":"PBO:0086206"}


id: GO:0006815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium/potassium transport (obsolete GO:0006815)","synonyms":[{"name":"sodium/potassium transport","type":"exact"}],"termid":"GO:0006815"}


id: GO:1990575
data:
  {"annotated_genes":["SJAG_00543","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93893,103745],"is_not":false,"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The process in which L-ornithine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:9237680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000066"],"synonyms":[{"name":"mitochondrial ornithine transmembrane transport","type":"broad"},{"name":"mitochondrial ornithine transport","type":"related"}],"termid":"GO:1990575","terms_by_termid":{"GO:1990575":null}}


id: PBO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family GTPase Msp1","termid":"PBO:0004533"}


id: GO:0050995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"negatively_regulates","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid catabolic process","synonyms":[{"name":"down regulation of lipid catabolic process","type":"exact"},{"name":"down-regulation of lipid catabolic process","type":"exact"},{"name":"downregulation of lipid catabolic process","type":"exact"},{"name":"inhibition of lipid catabolic process","type":"narrow"},{"name":"negative regulation of lipid breakdown","type":"exact"},{"name":"negative regulation of lipid catabolism","type":"exact"},{"name":"negative regulation of lipid degradation","type":"exact"}],"termid":"GO:0050995"}


id: PBO:0050328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 30","termid":"PBO:0050328"}


id: GO:1901974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerate from one side of a membrane to the other.","definition_xrefs":["PMID:23382251","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerate transmembrane transporter activity","termid":"GO:1901974"}


id: PBO:0061935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 8","termid":"PBO:0061935"}


id: FYPO:0007000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a normal (i.e. indistinguishable from wild type) extent at transposable elements. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","PMID:26518661","GO:0005721","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal histone exchange at transposable element","synonyms":[{"name":"normal histone exchange at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone exchange at transposable element during vegetative growth","type":"exact"},{"name":"normal histone exchange at transposon","type":"exact"}],"termid":"FYPO:0007000"}


id: PBO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 like 1","termid":"PBO:0071137"}


id: GO:0052132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near host (obsolete GO:0052132)","termid":"GO:0052132"}


id: MOD:01589
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine.","definition_xrefs":["PubMed:15249686","PubMed:16949362","RESID:AA0499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DADDGlc) serine","type":"exact"},{"name":"DADDGlc","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)]glucosyl-L-serine","type":"exact"},{"name":"O-seryl-beta-2,4-bis(acetylamino)glucoside","type":"exact"},{"name":"O3-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"}],"termid":"MOD:01589"}


id: PBO:0078024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 14","termid":"PBO:0078024"}


id: PBO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member A","termid":"PBO:0047079"}


id: GO:0006270
data:
  {"annotated_genes":["SJAG_05301","SJAG_04210","SJAG_02908","SJAG_04341","SJAG_00884","SJAG_04671","SJAG_03720","SJAG_00327","SJAG_00536","SJAG_01210","SJAG_02800","SJAG_05239","SJAG_01624","SJAG_00364","SJAG_00874","SJAG_01823","SJAG_01267","SJAG_03048","SJAG_02172","SJAG_02607","SJAG_03160","SJAG_02627","SJAG_00696","SJAG_04879","SJAG_03451","SJAG_02348","SJAG_04994","SJAG_04995","SJAG_00857","SJAG_02394","SJAG_00311","SJAG_02098","SJAG_03927","SJAG_02667","SJAG_01354","SJAG_02074","SJAG_01762","SJAG_03438","SJAG_00399","SJAG_02162","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93078],"is_not":false,"summary":null,"term":"GO:0006270"},{"annotations":[111379,103167,105811,109517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[99070],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[111383,107804,87455,109433,106434,109120,95109,85915,98697,92976,90144,107271,107934,109520,111259,101107,107534,106089,93082,103068,103170,88543,95102,109098,113333,111086,108352,103895,89527,103672,102234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[98096,104742,93431],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99073,107937,113271],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[84516,98101,112237,102430],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[95046],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"The process in which DNA-dependent DNA replication is started; it begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, followed by DNA unwinding.","definition_xrefs":["PMID:28209641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042024"],"synonyms":[{"name":"DNA endoreduplication initiation","type":"narrow"},{"name":"DNA re-replication initiation","type":"narrow"},{"name":"DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0006270","terms_by_termid":{"GO:0006270":null,"GO:0140529":null,"GO:0140530":null,"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-1 (MAML1); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["CORUM:2949","PMID:16510869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML1-RBP-Jkappa- ICN1 complex","synonyms":[{"name":"MAML1-CSL-ICN1","type":"exact"},{"name":"MAML1-CSL-Notch1 complex","type":"exact"},{"name":"MAML1-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0002193"}


id: PBO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 2","termid":"PBO:0050959"}


id: GO:2000001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"regulation of DNA damage checkpoint","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000001"}


id: PBO:0078601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 14","termid":"PBO:0078601"}


id: PBO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 84 pseudogene","termid":"PBO:0070170"}


id: GO:0038153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 4 receptor (CCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR4 signaling pathway","termid":"GO:0038152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL2-activated CCR4 signaling pathway","synonyms":[{"name":"CCL2/CCR4 signaling pathway","type":"related"}],"termid":"GO:0038153"}


id: PBO:0079035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 4-1","termid":"PBO:0079035"}


id: GO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial axis specification","synonyms":[{"name":"adaxial/abaxial determination","type":"related"}],"termid":"GO:0009943"}


id: PBO:0088253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, PTPA family Ypa2","termid":"PBO:0088253"}


id: GO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box H + ACA snoRNP protein (obsolete GO:0005735)","synonyms":[{"name":"box H + ACA snoRNP protein","type":"exact"}],"termid":"GO:0005735"}


id: PBO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin (predicted)","termid":"PBO:0004425"}


id: MOD:01268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:271#T","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site T","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01268"}


id: GO:0031139
data:
  {"annotated_genes":["SJAG_02472","SJAG_01345","SJAG_04509","SJAG_01084","SJAG_01978","SJAG_03453","SJAG_01699","SJAG_00210","SJAG_02723","SJAG_02444","SJAG_01113","SJAG_04682","SJAG_02233","SJAG_01509","SJAG_00600","SJAG_00781","SJAG_03486","SJAG_02773","SJAG_03340","SJAG_00975","SJAG_05000","SJAG_02266","SJAG_00993","SJAG_03067","SJAG_02066","SJAG_00256","SJAG_00990","SJAG_03735","SJAG_00514","SJAG_03623","SJAG_01311","SJAG_01254","SJAG_04026","SJAG_04312","SJAG_02785","SJAG_05153","SJAG_00472","SJAG_01794","SJAG_01718","SJAG_02923","SJAG_03802","SJAG_03081","SJAG_00664","SJAG_03309","SJAG_03346","SJAG_02380","SJAG_04009","SJAG_00117","SJAG_04813","SJAG_02379","SJAG_03501","SJAG_06638","SJAG_02592","SJAG_04206","SJAG_02730","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83580,86332,94238,95128,95806,97480,100680,102955,107258,112276],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[94103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[111564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[104652,114212,115071,95176,112143,112485,84675,102080,83462,102866,115072,111565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[101613,101704,102460,111508,100275,89955,83641,89811,102299,104864,112069,97570,88483,110442,86895,102659,96235],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[88888],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[88889,84696,92687,102081,87684,92010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[102954,83579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[115076,104420,100214,83287,115075,95177,102869,99120,112277,96192,104653,97103],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[86333,107250,85332,83329,89053],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[111567,86338,107251,102184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that increases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of conjugation with cellular fusion","type":"narrow"},{"name":"stimulation of conjugation with cellular fusion","type":"narrow"},{"name":"up regulation of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0031139","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:1900237":null,"GO:1902917":null}}


id: PBO:0074377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 3","termid":"PBO:0074377"}


id: PBO:0090070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox16","termid":"PBO:0090070"}


id: GO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of an animal organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ axis polarity","termid":"GO:0010084"}


id: PBO:0074105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 2","termid":"PBO:0074105"}


id: PBO:0083859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD pyrophosphatase; hydrolyzes FAD as the preferred substrate but also acts on NADH and ADP-ribose at lower rates; activity is dependent upon K+ and divalent metal cations; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; FPY1 is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0083859"}


id: FYPO:0005821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal NEDD8-specific protease activity","synonyms":[{"name":"abnormal deneddylase activity","type":"exact"}],"termid":"FYPO:0005821"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: PR:O74838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf10 gene.","definition_xrefs":["UniProtKB:O74838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.10","synonyms":[{"name":"Spom972h-wtf10","type":"exact"}],"termid":"PR:O74838"}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: PR:Q9P804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N(2),N(2)-dimethylguanosine tRNA methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03824","PANTHER:PTHR10631:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(26)-N(2))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.05","secondary_identifiers":["UniProtKB:Q9P804"],"synonyms":[{"name":"Spom972h-TRMT1","type":"exact"},{"name":"tRNA 2,2-dimethylguanosine-26 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(guanine-26,N(2)-N(2)) methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m(2,2)G26)dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P804"}


id: GO:1901854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin degradation","type":"exact"}],"termid":"GO:1901854"}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: GO:0010881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction by calcium ion signaling","termid":"GO:0010882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion","termid":"GO:0010881"}


id: PBO:0056335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 15","termid":"PBO:0056335"}


