# terms

id: GO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of blood mast cell degranulation in the bitten organism.","definition_xrefs":["PMID:21549739","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of mast cell degranulation in another organism","termid":"GO:0044479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of mast cell degranulation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044480"}


id: PBO:0067062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 87, pseudogene","termid":"PBO:0067062"}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: PBO:0050082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 2","termid":"PBO:0050082"}


id: PBO:0027292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_vegetative_cell_with_fragmented_septum","termid":"PBO:0027292"}


id: PBO:0059548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: GO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.4.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016643"}


id: PBO:0014237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase","termid":"PBO:0014237"}


id: FYPO:0004665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which linear elements are absent from the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear elements present in decreased numbers","termid":"FYPO:0005986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"linear elements absent from cell","synonyms":[{"name":"absent linear elements","type":"exact"},{"name":"linear elements absent","type":"exact"}],"termid":"FYPO:0004665"}


id: PBO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 5","termid":"PBO:0001619"}


id: PBO:0111448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdk11-cyclinL compex kinase subunit Cdk11","termid":"PBO:0111448"}


id: PBO:0083676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in turnover of plasma membrane proteins; member of the DUP380 subfamily of conserved, often subtelomeric COS genes; required for the multivesicular vesicle body sorting pathway that internalizes plasma membrane proteins for degradation; Cos proteins provide ubiquitin in trans for nonubiquitinated cargo proteins","termid":"PBO:0083676"}


id: GO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"fucosylgalactoside 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.37-RXN","Reactome:R-HSA-9034053","Reactome:R-HSA-9033961","RHEA:14349"],"synonyms":[{"name":"B transferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1,2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"[blood group substance] alpha-galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance B-dependent galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance beta-dependent galactosyltransferase activity","type":"narrow"},{"name":"fucosylglycoprotein 3-alpha-galactosyltransferase activity","type":"related"},{"name":"glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity","type":"exact"},{"name":"histo-blood group B transferase activity","type":"narrow"},{"name":"histo-blood substance B-dependent galactosyltransferase activity","type":"related"},{"name":"histo-blood substance beta-dependent galactosyltransferase activity","type":"narrow"}],"termid":"GO:0004381"}


id: PBO:0047180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member A","termid":"PBO:0047180"}


id: PBO:0057084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181c","termid":"PBO:0057084"}


id: GO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube morphogenesis","termid":"GO:0060562"}


id: GO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.","definition_xrefs":["MetaCyc:RXN-645","UM-BBD_reactionID:r0051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity","termid":"GO:0018815"}


id: GO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytolipin-H + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["EC:2.4.1.206","MetaCyc:2.4.1.206-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846501","RHEA:13905"],"synonyms":[{"name":"LA2 synthase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-beta-D-glucosylceramide beta-1,3-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta1->3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047256"}


id: PBO:0074448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small leucine rich protein 1","termid":"PBO:0074448"}


id: GO:0050941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"negatively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pigment cell differentiation","synonyms":[{"name":"down regulation of pigment cell differentiation","type":"exact"},{"name":"down-regulation of pigment cell differentiation","type":"exact"},{"name":"downregulation of pigment cell differentiation","type":"exact"},{"name":"inhibition of pigment cell differentiation","type":"narrow"}],"termid":"GO:0050941"}


id: GO:0000987
data:
  {"annotated_genes":["SJAG_01725","SJAG_00163","SJAG_02709","SJAG_01062","SJAG_03519","SJAG_00792","SJAG_04584","SJAG_02048","SJAG_02311","SJAG_05339","SJAG_00693","SJAG_02956","SJAG_03120","SJAG_03735","SJAG_04009","SJAG_04036","SJAG_02472","SJAG_05337","SJAG_00987","SJAG_04712","SJAG_04388","SJAG_00067","SJAG_03879","SJAG_03346","SJAG_01307","SJAG_02252","SJAG_06576","SJAG_03388","SJAG_01441","SJAG_00698","SJAG_05006","SJAG_01740","SJAG_01532","SJAG_04749","SJAG_02938","SJAG_05343","SJAG_01343","SJAG_06599","SJAG_04191","SJAG_04092","SJAG_02406","SJAG_02326","SJAG_05288","SJAG_04855","SJAG_04839","SJAG_01157","SJAG_01694","SJAG_03183","SJAG_00304","SJAG_03354","SJAG_02138","SJAG_05247","SJAG_04421","SJAG_02922","SJAG_00664","SJAG_03143","SJAG_05153","SJAG_03484","SJAG_00861","SJAG_00386","SJAG_02569","SJAG_02218","SJAG_02915","SJAG_03911","SJAG_02149","SJAG_02730","SJAG_02810","SJAG_00073","SJAG_03622","SJAG_01930","SJAG_00802","SJAG_04813","SJAG_00421","SJAG_00124","SJAG_03473","SJAG_01243","SJAG_03538","SJAG_00979","SJAG_00266","SJAG_03241","SJAG_03918","SJAG_00926","SJAG_00037","SJAG_00210","SJAG_04249","SJAG_02052","SJAG_01583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112072],"is_not":false,"summary":null,"term":"GO:0000987"},{"annotations":[88316,104073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035497"},{"annotations":[106603,110058,112616,102820,93779,95493,101643,89300,109649,87408,107828,83019,84496,105040,88805,93185,93188,88321,92703,84375,93187,110810,92571,88867,91915,97210,104901,106934,93030,112075,100225,85570,102544,98430,105561,88925,106775,102177,89656,91676,90319,103822,105216,107787,105039,92217,93186,95180,100555,92950,106743,94106,106759,84931,104658,110557,114347,102059,110357,97773,78546,99321,101917,102873,87982,103411,97960,83397,92017,109357,95809,112475,83850,83906,76886,98008,93189,113487,100220,107827,114060,96196,91319,90337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[102874,104659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[83624,95255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[95257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[95258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[98813,91210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"},{"annotations":[104487,83467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010736"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site, located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by some RNA polymerase. Cis-regulatory sites are often referred to as a sequence motifs, enhancers, or silencers.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00067":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02915":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000986","GO:0001150","GO:0001159","GO:0035326","GO:0001158"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase enhancer sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase upstream activating sequence (UAS) sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type cis-regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"cis-regulatory region binding","type":"related"},{"name":"core promoter proximal region DNA binding","type":"narrow"},{"name":"core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"enhancer binding","type":"related"},{"name":"enhancer sequence-specific DNA binding","type":"related"},{"name":"eubacterial-type RNA polymerase regulatory transcription factor sequence-specific DNA binding","type":"narrow"},{"name":"promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0000987","terms_by_termid":{"GO:0000978":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0010736":null,"GO:0035497":null,"GO:0044377":null}}


id: PBO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 135","termid":"PBO:0071133"}


id: GO:0004066
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97892,106667],"is_not":false,"summary":null,"term":"GO:0004066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.","definition_xrefs":["RHEA:12228","EC:6.3.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"asparagine synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASNSYNB-RXN","Reactome:R-HSA-70599"],"synonyms":[{"name":"AS","type":"related"},{"name":"AS-B activity","type":"related"},{"name":"L-aspartate:L-glutamine amido-ligase (AMP-forming)","type":"related"},{"name":"asparagine synthase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"asparagine synthetase B activity","type":"related"},{"name":"glutamine-dependent asparagine synthetase activity","type":"related"}],"termid":"GO:0004066","terms_by_termid":{"GO:0004066":null}}


id: PR:B5BP47
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vba2 gene.","definition_xrefs":["UniProtKB:B5BP47","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C460.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.03","synonyms":[{"name":"Spom972h-vba2","type":"exact"}],"termid":"PR:B5BP47"}


id: PBO:0015708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K20 methyltransferase Set9","termid":"PBO:0015708"}


id: PBO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 5","termid":"PBO:0061515"}


id: MOD:01230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:365#K","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","termid":"MOD:00790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:01230"}


id: PBO:0078644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-2","termid":"PBO:0078644"}


id: PBO:0049788
data:
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id: PATO:0000074
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id: FYPO:0000900
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id: PBO:0030087
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id: PBO:0080902
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id: PBO:0082870
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id: PBO:0074486
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id: GO:0002016
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id: PBO:0011058
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id: PBO:0076813
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id: PBO:0017845
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id: PBO:0075044
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id: GO:0004186
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id: PBO:0072332
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id: GO:0031225
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id: PBO:0001852
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id: internal:narrow
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id: PBO:0058347
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id: PBO:0041240
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id: PBO:0071843
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id: GO:0010633
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id: PBO:0075846
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id: PBO:0039218
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id: PBO:0075752
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id: PBO:0002710
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id: GO:0021769
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id: PBO:0000324
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id: GO:0006802
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id: GO:0002568
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of T cell receptor genes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes","synonyms":[{"name":"somatic diversification of TCR genes","type":"exact"}],"termid":"GO:0002568"}


id: GO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of protein tyrosine to peptidyl-L-3',4',5'-dihydroxyphenylalanine.","definition_xrefs":["RESID:AA0263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine","synonyms":[{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4',5'-trihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018172"}


id: PBO:0031167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_vegetative_growth","termid":"PBO:0031167"}


id: PBO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34 (predicted)","termid":"PBO:0005722"}


id: GO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases its size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont in host (obsolete GO:0044128)","termid":"GO:0044128"}


id: PBO:0072963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin V","termid":"PBO:0072963"}


id: PR:O14360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex non-core subunit NAF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03547","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex non-core subunit NAF1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.15","secondary_identifiers":["UniProtKB:O14360"],"synonyms":[{"name":"Spom972h-NAF1","type":"exact"},{"name":"nuclear assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14360"}


id: SO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that is invalidated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated","termid":"SO:0000790"}


id: PBO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22 receptor subunit alpha 1","termid":"PBO:0051597"}


id: GO:0016560
data:
  {"annotated_genes":["SJAG_00702","SJAG_00891","SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92598,98834,107753],"is_not":false,"summary":null,"term":"GO:0016560"}]},"cv_name":"biological_process","definition":"The process in which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the peroxisomal membrane.","definition_xrefs":["PMID:11687502","PMID:11988772","PMID:14754507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0007031","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein import into peroxisome matrix, docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome matrix protein import, docking","type":"exact"},{"name":"peroxisome receptor docking","type":"related"},{"name":"protein docking during peroxisome matrix protein import","type":"exact"},{"name":"protein docking during protein import into peroxisome matrix","type":"exact"},{"name":"protein docking during protein transport into peroxisome matrix","type":"exact"},{"name":"protein transport into peroxisome matrix, docking","type":"exact"}],"termid":"GO:0016560","terms_by_termid":{"GO:0016560":null}}


id: GO:0009345
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric enzyme complex which, in bacteria, is usually a tetramer of two alpha and two beta chains and in eukaryotes, is usually a homodimer. Functions in the ligation of glycine and tRNA(Gly) to form glycyl-tRNA(Gly).","definition_xrefs":["PMID:15733854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycine-tRNA ligase complex","synonyms":[{"name":"glycine-tRNA synthetase complex","type":"exact"}],"termid":"GO:0009345"}


id: GO:0001651
data:
  {"annotated_genes":["SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84275],"is_not":false,"summary":null,"term":"GO:0001651"}]},"cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"dense fibrillar component","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1841764412"],"synonyms":[{"name":"pars fibrosa","type":"broad"}],"termid":"GO:0001651","terms_by_termid":{"GO:0001651":null}}


id: PBO:0070250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 193 pseudogene","termid":"PBO:0070250"}


id: PBO:0056278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2A member 2","termid":"PBO:0056278"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: MOD:00261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphouridine through a phosphodiester bond to form O4'-(phospho-5'-uridine)-L-tyrosine.","definition_xrefs":["PubMed:2885322","Unimod:417#Y","DeltaMass:0","RESID:AA0256","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-uridine)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-uridine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-uridylic-O-tyrosine","type":"exact"},{"name":"MOD_RES O-UMP-tyrosine","type":"exact"},{"name":"O-Uridinylylation (of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-uridine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-uridine phosphodiester","type":"exact"},{"name":"OUMPTyr","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"hydrogen 5'-uridylate tyrosine ester","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00261"}


id: GO:0018114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = D-threonine.","definition_xrefs":["EC:5.1.1.6","RHEA:13913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"threonine racemase activity","secondary_identifiers":["KEGG_REACTION:R01467","MetaCyc:THREONINE-RACEMASE-RXN"],"termid":"GO:0018114"}


id: PBO:0083470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRR1","termid":"PBO:0083470"}


id: GO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["CL:0000850","GOC:PARL","PMID:21106844","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of serotonergic neuron axon","synonyms":[{"name":"chemorepulsion of 5-HT axon","type":"exact"},{"name":"chemorepulsion of serotonergic axon","type":"related"}],"termid":"GO:0036519"}


id: GO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myristoyl-CoA + acetyl-CoA = 3-oxopalmitoyl-CoA + CoA.","definition_xrefs":["MetaCyc:2.3.1.155-RXN","EC:2.3.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"},{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA C-myristoyltransferase activity","secondary_identifiers":["RHEA:18161"],"synonyms":[{"name":"3-oxopalmitoyl-CoA hydrolase activity","type":"related"},{"name":"3-oxopalmitoyl-CoA-CoA acetyltransferase activity","type":"related"},{"name":"myristoyl-CoA C-acetyltransferase activity","type":"related"},{"name":"myristoyl-CoA:acetyl-CoA C-myristoyltransferase activity","type":"related"}],"termid":"GO:0050633"}


id: FYPO:0006619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is normal (i.e. indistinguishable from wild type). Total mRNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"normal nuclear poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"normal nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"normal nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"normal nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"normal nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006619"}


id: FYPO:0003849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing fluconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on fluconazole","synonyms":[{"name":"normal cell population growth in presence of fluconazole","type":"exact"},{"name":"normal cell population growth on fluconazole","type":"exact"},{"name":"normal cellular response to fluconazole","type":"related"},{"name":"normal vegetative cell population growth on fluconazole","type":"exact"}],"termid":"FYPO:0003849"}


id: FYPO:0005573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear transport","synonyms":[{"name":"nuclear transport: abnormal","type":"related"}],"termid":"FYPO:0005573"}


id: PATO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000181 piloerection (obsolete PATO:0000181)","termid":"PATO:0000181"}


id: PBO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cdr2","termid":"PBO:0000927"}


id: PBO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.11","termid":"PBO:0003949"}


id: GO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones and neuropeptides from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 2 activity (obsolete GO:0004286)","synonyms":[{"name":"NEC 2 activity","type":"narrow"},{"name":"PC2 activity","type":"narrow"},{"name":"neuroendocrine convertase 2 activity","type":"narrow"},{"name":"prohormone convertase II activity","type":"narrow"},{"name":"proprotein convertase 2 activity","type":"exact"}],"termid":"GO:0004286"}


id: GO:0045259
data:
  {"annotated_genes":["SJAG_02598","SJAG_00985","SJAG_04122","SJAG_MIT37","SJAG_02105","SJAG_03925","SJAG_00836","SJAG_MIT09","SJAG_00915","SJAG_00542","SJAG_00133","SJAG_MIT15","SJAG_00438","SJAG_02564","SJAG_03114","SJAG_05204","SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97537,99446,115057,89450,115053,103737,90440,88843,115048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000276"},{"annotations":[88410,84587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[98774,100770,104634],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005756"},{"annotations":[99417,103641,111837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"},{"annotations":[77557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045261"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient.","definition_xrefs":["ISBN:0198547684","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0045255"],"synonyms":[{"name":"F1-F0 complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"hydrogen-transporting ATP synthase complex","type":"exact"},{"name":"proton-transporting F-type ATPase complex","type":"related"}],"termid":"GO:0045259","terms_by_termid":{"GO:0000274":null,"GO:0000276":null,"GO:0005754":null,"GO:0005756":null,"GO:0045261":null}}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12956429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: PBO:0062670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 1 pseudogene","termid":"PBO:0062670"}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: FYPO:0006557
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115319,115320],"is_not":false,"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null},"genotype_count":2,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null},"single_locus_annotated_genes":["SJAG_02252","SJAG_03143"],"single_locus_genotype_uniquenames":["ace2delta","sep1delta"],"synonyms":[{"name":"abolished cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abolished cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abolished mitotic cytokinetic cell separation","type":"exact"},{"name":"abolished septum digestion after cytokinesis","type":"exact"},{"name":"cell separation after cytokinesis abolished","type":"exact"}],"termid":"FYPO:0006557","terms_by_termid":{"FYECO:0000137":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 1","termid":"PBO:0051616"}


id: PBO:0038443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis associated Mth938 domain containing","termid":"PBO:0038443"}


id: PBO:0029285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleolus","termid":"PBO:0029285"}


id: PR:Q9UQY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01989","PANTHER:PTHR11599:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.06","secondary_identifiers":["UniProtKB:Q9UQY2"],"synonyms":[{"name":"Spom972h-PSMB1","type":"exact"}],"termid":"PR:Q9UQY2"}


id: PBO:0045943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B3","termid":"PBO:0045943"}


id: PBO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A6, pseudogene","termid":"PBO:0046881"}


id: GO:0072698
data:
  {"annotated_genes":["SJAG_02731","SJAG_04455","SJAG_00883","SJAG_02695","SJAG_04901","SJAG_01211","SJAG_01546","SJAG_01790","SJAG_03376","SJAG_01224","SJAG_00918","SJAG_05319","SJAG_05220","SJAG_02514","SJAG_00229","SJAG_00082","SJAG_03508","SJAG_03437","SJAG_04468","SJAG_03915","SJAG_01371","SJAG_02045","SJAG_05266","SJAG_01775","SJAG_02529","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106041,89033,91263,100804,96989,103369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[103053],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[92621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[109908,86776,92513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[86874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[85474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[96218,92415,94307,112928,103327,105760,84601,85211,104735,86468,110067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[96658,102190],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902542"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02045":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_03376":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule cytoskeleton","type":"exact"}],"termid":"GO:0072698","terms_by_termid":{"GO:0035372":null,"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902542":null,"GO:1902543":null,"GO:1904518":null,"GO:1990976":null}}


id: PBO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family protein","termid":"PBO:0000155"}


id: PBO:0004412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med8","termid":"PBO:0004412"}


id: GO:0048204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from one Golgi cisterna to another.","definition_xrefs":["GOC:jid","ISBN:0716731363","GOC:mah","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, inter-Golgi cisterna","synonyms":[{"name":"inter-Golgi cisterna targeting","type":"exact"}],"termid":"GO:0048204"}


id: PBO:0088821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein Phf1","termid":"PBO:0088821"}


id: PATO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A growth quality of a process inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced or increased growth.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth quality of occurrent","termid":"PATO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic growth","termid":"PATO:0001490"}


id: GO:0051911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + 2-(2,3-dihydropentaprenyloxy)phenazine = 2-dihydropentaprenyloxyphenazine.","definition_xrefs":["EC:1.12.98.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Methanosarcina-phenazine hydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7733","RHEA:24436"],"synonyms":[{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"related"},{"name":"hydrogen:2-(2,3-dihydropentaprenyloxy)phenazine oxidoreductase activity","type":"related"},{"name":"methanophenazine hydrogenase activity","type":"exact"},{"name":"methylviologen-reducing hydrogenase activity","type":"exact"}],"termid":"GO:0051911"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: PBO:0085312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidic acid transfer protein; plays a role in phospholipid metabolism by transporting phosphatidic acid from the outer to the inner mitochondrial membrane; localizes to the mitochondrial intermembrane space; null mutant has altered cardiolipin and phosphatidic acid levels; ortholog of human PRELI","termid":"PBO:0085312"}


id: PBO:0055345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2773","termid":"PBO:0055345"}


id: GO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acyl-CoA + H2O = a medium-chain fatty acid + CoA + H+. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:68184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.19-RXN"],"synonyms":[{"name":"medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"medium-chain hydrolase activity","type":"related"},{"name":"medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052815"}


id: SO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid SSU rRNA is an RNA component of the small subunit of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA","termid":"SO:0002346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_SSU_rRNA","synonyms":[{"name":"plastid SSU rRNA","type":"exact"},{"name":"plastid small subunit rRNA","type":"exact"}],"termid":"SO:0002347"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: GO:0006848
data:
  {"annotated_genes":["SJAG_04593","SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89981,110128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The directed movement of pyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pyruvate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006848","terms_by_termid":{"GO:0006850":null}}


id: PBO:0085078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes; has mRNA binding activity","termid":"PBO:0085078"}


id: GO:0009117
data:
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id: PBO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 13","termid":"PBO:0070324"}


id: PBO:0040857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 3A","termid":"PBO:0040857"}


id: PBO:0074349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 associated long non-coding RNA","termid":"PBO:0074349"}


id: GO:0036508
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein.","definition_xrefs":["PMID:25092655","GOC:bf","PMID:21062743","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demannosylation","termid":"GO:0036507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein alpha-1,2-demannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein mannose trimming","type":"related"},{"name":"mannose trimming","type":"broad"}],"termid":"GO:0036508","terms_by_termid":{"GO:1904380":null}}


id: PBO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: PBO:0053678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 863","termid":"PBO:0053678"}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: PATO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001151 relative susceptibility value (obsolete PATO:0001151)","termid":"PATO:0001151"}


id: PBO:0087496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of E3 ubiquitin ligase complex involved in replication repair; stabilizes protein components of the replication fork such as the fork-pausing complex and leading strand polymerase, preventing fork collapse and promoting efficient recovery during replication stress; regulates Ty1 transposition; involved with Rtt101p in nonfunctional rRNA decay","termid":"PBO:0087496"}


id: GO:0006740
data:
  {"annotated_genes":["SJAG_04334","SJAG_03934","SJAG_01824","SJAG_03852","SJAG_02696","SJAG_00501","SJAG_04362","SJAG_02297","SJAG_00633","SJAG_00685","SJAG_03786","SJAG_04263","SJAG_05314","SJAG_02154","SJAG_00070","SJAG_02191","SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90719,90720,95461,96580,97824,97825],"is_not":false,"summary":null,"term":"GO:0006740"},{"annotations":[84392,91995,104274,109778],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[111309,114439,92624,92534,90123,93854,107465],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[85155],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[110981],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"A metabolic process that generates a pool of NADPH by the reduction of NADP+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03786":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"NADPH regeneration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (reduced) regeneration","type":"exact"},{"name":"reduced NADP regeneration","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate regeneration","type":"exact"}],"termid":"GO:0006740","terms_by_termid":{"GO:0006740":null,"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: PBO:0064396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNISR antisense RNA 1","termid":"PBO:0064396"}


id: PBO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131C (pseudogene)","termid":"PBO:0044848"}


id: PBO:0040540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 6","termid":"PBO:0040540"}


id: PBO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APCDD1L divergent transcript","termid":"PBO:0039691"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: PBO:0085678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in producing mature rRNAs and snoRNAs; involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085678"}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: GO:0140802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal glycine + NAD+ = [protein]-C-terminal O-(ADP-D-ribosyl)-glycine + nicotinamide.","definition_xrefs":["PMID:28525742","RHEA:58268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"NAD+-protein-C-terminal glycine ADP-ribosyltransferase activity","termid":"GO:0140802"}


id: GO:2001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902987"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"negative regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"negative regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001195"}


id: PBO:0065675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type U","termid":"PBO:0065675"}


id: GO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"follicle-stimulating hormone secretion","synonyms":[{"name":"FSH secretion","type":"exact"},{"name":"follicle stimulating hormone secretion","type":"exact"},{"name":"follitropin secretion","type":"exact"}],"termid":"GO:0046884"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: PBO:0057321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-2","termid":"PBO:0057321"}


id: PBO:0077336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM72 antisense RNA 1","termid":"PBO:0077336"}


id: GO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates glucose import.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import by transcription from RNA polymerase II promoter (obsolete GO:0100018)","termid":"GO:0100018"}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PBO:0078525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16","termid":"PBO:0078525"}


id: GO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, IPAF, NAIP and caspase-1, and includes among its functions the sensing of flagellin derived from Legionella pneumophila, Salmonella typhimurium, Pseudomonas aeruginosa and Shigella flexneri.","definition_xrefs":["GOC:add","PMID:20303873","GOC:vp","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"IPAF inflammasome complex","termid":"GO:0072557"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: GO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a drug that has originated internally within the cell or organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous drug catabolic process (obsolete GO:0042739)","synonyms":[{"name":"endogenous drug breakdown","type":"exact"},{"name":"endogenous drug catabolism","type":"exact"},{"name":"endogenous drug degradation","type":"exact"}],"termid":"GO:0042739"}


id: PBO:0081594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519","termid":"PBO:0081594"}


id: GO:1903930
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GOC:TermGenie","PMID:23695302","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pyrimidine salvage","type":"related"}],"termid":"GO:1903930","terms_by_termid":{"GO:1903931":null}}


id: GO:0018592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrocatechol + O2 + 4 e- + 3 H+ = H2O + nitrite + 1,2,4-benzenetriol.","definition_xrefs":["UM-BBD_reactionID:r0231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-nitrocatechol 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.166"],"termid":"GO:0018592"}


id: PBO:0087689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84 nuclear pore and SEACAT subcomplexes; involved in nucleocytoplasmic transport and NPC biogenesis in the nuclear pore subcomplex; subunit of SEACAT, a subcomplex of the SEA complex that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; human SEH1 homolog","termid":"PBO:0087689"}


id: GO:1904652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25411334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell division site involved in cell separation after cytokinesis","termid":"GO:1904652"}


id: PBO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 2","termid":"PBO:0052623"}


id: FYPO:0002387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at subtelomeres is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to telomere","termid":"FYPO:0003803"},{"relation_name":"is_a","term_name":"decreased protein localization to subtelomeric heterochromatin","termid":"FYPO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to telomeric heterochromatin during vegetative growth","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002387"}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_00981","SJAG_00667","SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95836],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[91328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[114518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: GO:0050836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["RESID:AA0357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-arginyl diiron disulfide","termid":"GO:0050836"}


id: PBO:0068203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 510","termid":"PBO:0068203"}


id: PBO:0077011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS1 antisense RNA 1","termid":"PBO:0077011"}


id: PBO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 Pex12","termid":"PBO:0090086"}


id: FYPO:0005511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any meiotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint phenotype","synonyms":[{"name":"fission yeast meiotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0005511"}


id: PBO:0081349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 160","termid":"PBO:0081349"}


id: PBO:0058136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4435-2","termid":"PBO:0058136"}


id: PBO:0087422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit alpha of assimilatory sulfite reductase; complex converts sulfite into sulfide","termid":"PBO:0087422"}


id: GO:0035675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["CL:0000856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell development","termid":"GO:0035675"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: PBO:0049714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 2","termid":"PBO:0049714"}


id: PBO:0063369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 9","termid":"PBO:0063369"}


id: PBO:0085109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1","termid":"PBO:0085109"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:sdb_2009","GOC:cilia","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: SO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcriptional cis regulatory region that when located between an enhancer and a gene's promoter prevents the enhancer from modulating the expression of the gene. Sometimes referred to as an insulator but may not include the barrier function of an insulator.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_blocking_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:enhancer_blocking_element","type":"exact"},{"name":"enhancer blocking element","type":"exact"},{"name":"insulator","type":"related"}],"termid":"SO:0002190"}


id: PBO:0077665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11b","termid":"PBO:0077665"}


id: MOD:00923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cy5 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy5 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy5","type":"related"}],"termid":"MOD:00923"}


id: GO:0036466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic vesicle recycling where vesicles endocytosed via clathrin-coated pits re-acidify and refill with neurotransmitters after passing through an endosomal intermediate.","definition_xrefs":["GOC:dos","GOC:pad","GOC:PARL","PMID:15217342","GOC:aruk","GOC:bc","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle recycling","termid":"GO:0036465"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle recycling via endosome","secondary_identifiers":["GO:0099090"],"synonyms":[{"name":"recycling endosome localization within postsynapse","type":"exact"}],"termid":"GO:0036466"}


id: GO:0010961
data:
  {"annotated_genes":["SJAG_03516","SJAG_02578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85694,103416],"is_not":false,"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of magnesium ions within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion homeostasis","termid":"GO:0010960"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular magnesium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular magnesium ion homeostasis","type":"exact"}],"termid":"GO:0010961","terms_by_termid":{"GO:0010961":null}}


id: GO:0018912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring. It forms white crystals at room temperature and is used as an insecticidal fumigant, particularly in mothballs.","direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dcz"],"synonyms":[{"name":"1,4-dichlorobenzene metabolism","type":"exact"}],"termid":"GO:0018912"}


id: GO:0048706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb","PMID:16049113","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system development","termid":"GO:0001501"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal system development","synonyms":[{"name":"embryonic skeletal development","type":"exact"}],"termid":"GO:0048706"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0007327","GO:0046614"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: FYPO:0006358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","GO:0006338","PMID:28674280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin remodeling during glucose starvation","synonyms":[{"name":"abolished chromatin modeling during glucose starvation","type":"exact"},{"name":"abolished chromatin remodeling during glucose depletion","type":"exact"},{"name":"abolished chromatin remodeling during glucose deprivation","type":"related"},{"name":"abolished chromatin remodeling during glucose limitation","type":"related"},{"name":"abolished chromatin remodelling during glucose starvation","type":"exact"},{"name":"chromatin remodeling during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0006358"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: GO:0038118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 7 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:15059845","PMID:15778365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"CCR7 signaling pathway","type":"related"}],"termid":"GO:0038118"}


id: FYPO:0006875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is abnormal.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006875"}


id: PBO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transporter inducer Gti1","termid":"PBO:0000318"}


id: GO:0044076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism activates or increases the frequency, rate or extent of vacuole organization in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host vacuole organization (obsolete GO:0044076)","synonyms":[{"name":"positive regulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"positive regulation by symbiont of host vacuole organisation","type":"exact"},{"name":"positive regulation of host vacuole organization by symbiont","type":"exact"}],"termid":"GO:0044076"}


id: GO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase IV is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol IV is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. The largest and second-largest subunits of Pol IV are the catalytic subunits and share similarity with the corresponding subunits of other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase V, while the largest subunit is found only in RNAP IV complex.","definition_xrefs":["PMID:15692015","PMID:19110459","PMID:15766525","GOC:mtg_sensu","GOC:krc","PMID:16140984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase IV complex","secondary_identifiers":["GO:0000420"],"synonyms":[{"name":"DNA-directed RNA polymerase IV complex","type":"exact"},{"name":"DNA-directed RNA polymerase IVa complex","type":"exact"}],"termid":"GO:0000418"}


id: PBO:0077512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 230","termid":"PBO:0077512"}


id: PBO:0078811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA selenocysteine 1 associated protein 1","termid":"PBO:0078811"}


id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["GOC:jl","UniProtKB-KW:KW-0945","GOC:bf","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host process","secondary_identifiers":["GO:0044661","VZ:886","GO:0044792"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: PBO:0111757
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0111757"}


id: PBO:0086622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; contains ankyrin (Ank) repeats; YCR051W is not an essential gene","termid":"PBO:0086622"}


id: PBO:0073297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 19","termid":"PBO:0073297"}


id: PBO:0052423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 2","termid":"PBO:0052423"}


id: GO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanin metabolic process","synonyms":[{"name":"melanin metabolism","type":"exact"}],"termid":"GO:0006582"}


id: PBO:0046712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1A antisense RNA","termid":"PBO:0046712"}


id: FYPO:0000461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which flocculation does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete flocculation abolished (obsolete FYPO:0000461)","synonyms":[{"name":"absent flocculation","type":"exact"},{"name":"flocculation: absent","type":"related"}],"termid":"FYPO:0000461"}


id: GO:0032231
data:
  {"annotated_genes":["SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103444],"is_not":false,"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin cable assembly","type":"exact"},{"name":"regulation of actin filament bundle formation","type":"related"}],"termid":"GO:0032231","terms_by_termid":{"GO:0032231":null}}


id: PBO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn1/Mts4","termid":"PBO:0090256"}


id: PR:O14295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.11","synonyms":[{"name":"PL reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plr1","type":"exact"}],"termid":"PR:O14295"}


id: PBO:0062380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 2","termid":"PBO:0062380"}


id: PBO:0078956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon ACT) 1-1","termid":"PBO:0078956"}


id: PBO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12","termid":"PBO:0061221"}


id: GO:0019163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine 5'-phosphate + 2-oxoglutarate = pyridoxal 5'-phosphate + D-glutamate.","definition_xrefs":["EC:2.6.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"pyridoxamine-phosphate transaminase activity","secondary_identifiers":["MetaCyc:PYRDAMPTRANS-RXN","RHEA:15877"],"synonyms":[{"name":"pyridoxamine 5'-phosphate transaminase activity","type":"related"},{"name":"pyridoxamine 5'-phosphate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"pyridoxamine phosphate aminotransferase activity","type":"related"},{"name":"pyridoxamine-5'-phosphate:2-oxoglutarate aminotransferase (D-glutamate-forming)","type":"related"},{"name":"pyridoxamine-phosphate aminotransferase activity","type":"exact"}],"termid":"GO:0019163"}


id: PBO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 8","termid":"PBO:0044328"}


id: PBO:0032695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_midzone_assembly","termid":"PBO:0032695"}


id: GO:0051303
data:
  {"annotated_genes":["SJAG_03092","SJAG_05019","SJAG_01211","SJAG_07002","SJAG_02045","SJAG_03287","SJAG_00756","SJAG_01613","SJAG_03543","SJAG_01775","SJAG_00082","SJAG_00207","SJAG_04280","SJAG_01082","SJAG_03989","SJAG_03217","SJAG_03220","SJAG_01837","SJAG_03685","SJAG_04745","SJAG_03926","SJAG_05260","SJAG_00768","SJAG_01263","SJAG_03048","SJAG_00418","SJAG_03437","SJAG_01601","SJAG_02814","SJAG_05226","SJAG_02731","SJAG_05295","SJAG_01297","SJAG_04076","SJAG_05266","SJAG_02286","SJAG_01538","SJAG_04623","SJAG_03126","SJAG_01224","SJAG_00302","SJAG_02761","SJAG_01278","SJAG_03327","SJAG_03540","SJAG_03698","SJAG_05196","SJAG_00918","SJAG_00646","SJAG_01371","SJAG_00930","SJAG_05290","SJAG_03683","SJAG_04040","SJAG_02336","SJAG_01777","SJAG_00335","SJAG_02346","SJAG_01805","SJAG_00678","SJAG_02624","SJAG_03680","SJAG_02807","SJAG_04412","SJAG_00794","SJAG_05220","SJAG_02737","SJAG_04259","SJAG_01370","SJAG_05319","SJAG_04140","SJAG_02451","SJAG_04884","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[83303,89414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[91185,83437,106181,107576,109745,112529,96077,98162,93565,86870,105774,114127,90924,83187,94300,97047,110469,101257,106224,114654,85513,86479],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[85761,97048,83247,89379,94301,113065,103654,109747,111513],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[104101],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[85227,101752],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[100872,85228,95601,82821,98556],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[82822,113553,101753,113692,111938,92357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[101754,109962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[105065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051310"},{"annotations":[105775,90365],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[99666,104105,94915,94303,89781],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[84600,94304,99667,103326,108535,89416,109174,112927,104106,110474,112676,105759,84828,97740,97739,104734,109749,86467,89782,108533,108534,96217,98164,114684,94305,94812,110066,97741,99307,85210],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98089],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[112003,107861,85467,100952],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[89391,85471,98108,107080,112685],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[112688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[112689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"},{"annotations":[104995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[94309,103660,84602,106184,85212,101260,86469,93566,98165,90929,97052,106225,103328,91186,105761,111920,96219,109175,89395,104736,112929,110068,104996],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[112958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle 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of chromosome localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome positioning","type":"exact"},{"name":"establishment of chromosome localisation","type":"exact"}],"termid":"GO:0051303","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0051310":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0070197":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140405":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0071467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 8","termid":"PBO:0071467"}


id: FYPO:0004222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004222"}


id: PBO:0029849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_riboflavin_binding","termid":"PBO:0029849"}


id: GO:0140058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized into branches. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:aruk","PMID:23270857","PMID:23764288","PMID:17114044","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection arborization","synonyms":[{"name":"branching morphogenesis of a neurite","type":"related"},{"name":"branching morphogenesis of a neuron projection","type":"related"},{"name":"neurite arborization","type":"exact"},{"name":"neurite branching","type":"exact"},{"name":"neuron projection branching","type":"exact"}],"termid":"GO:0140058"}


id: GO:0055067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic cations within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monovalent inorganic cation homeostasis (obsolete GO:0055067)","termid":"GO:0055067"}


id: GO:0034503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the rDNA repeats on a chromosome in the nucleolus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"part_of","term_name":"nucleolus organization","termid":"GO:0007000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nucleolar rDNA repeats","synonyms":[{"name":"condensin localization to nucleolar rDNA repeats","type":"narrow"},{"name":"protein localisation to nucleolar rDNA repeats","type":"exact"}],"termid":"GO:0034503"}


id: GO:0034951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-hydroxylaminobenzoate = 3-hydroxyanthranilate.","definition_xrefs":["UM-BBD_reactionID:r1026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"o-hydroxylaminobenzoate mutase activity","secondary_identifiers":["EC:5.4.99.-","MetaCyc:RXN-8846"],"termid":"GO:0034951"}


id: MOD:00807
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to pyruvic acid.","definition_xrefs":["PubMed:3042771","DeltaMass:23","PubMed:10085076","PubMed:8464063","RESID:AA0127#SER","Unimod:385#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Ser)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"Pyruvate","type":"exact"},{"name":"Pyruvoyl- (Serine)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00807"}


id: PBO:0067697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 5","termid":"PBO:0067697"}


id: GO:0006362
data:
  {"annotated_genes":["SJAG_02070","SJAG_03144","SJAG_01948","SJAG_04261","SJAG_02653","SJAG_01128","SJAG_02691","SJAG_00731","SJAG_03956","SJAG_04106","SJAG_02101","SJAG_01562","SJAG_01765","SJAG_02871","SJAG_01444","SJAG_00139","SJAG_01313","SJAG_03578","SJAG_01698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83110,83111,85018,85858,87534,88156,89493,90827,91367,98414,99093,100653,101594,105643,106555,109078,109466,109467,109766,110183,111503],"is_not":false,"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase I specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase I.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02691":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001183"],"synonyms":[{"name":"RNA elongation from Pol I promoter","type":"exact"},{"name":"RNA polymerase I transcription elongation factor activity","type":"related"},{"name":"transcription elongation from RNA polymerase I promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0006362","terms_by_termid":{"GO:0006362":null}}


id: PR:O60055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small subunit processome component 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03996","PANTHER:PTHR17695:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.04","secondary_identifiers":["UniProtKB:O60055"],"synonyms":[{"name":"Spom972h-UTP20","type":"exact"},{"name":"U3 snoRNA-associated protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60055"}


id: FYPO:0007870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:34533984","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell side, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007870"}


id: PBO:0077228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 4","termid":"PBO:0077228"}


id: GO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that takes place mainly in germinal center B cells in which a large number of mutations are generated in the heavy chain and light chain V-region genes and their immediately surrounding introns in order to increase antibody diversity and contribute to affinity maturation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"peripheral B cell receptor editing","synonyms":[{"name":"peripheral B lymphocyte receptor editing","type":"exact"},{"name":"peripheral B-cell receptor editing","type":"exact"},{"name":"peripheral B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002345"}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: GO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histone deacetylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"histone deacetylase binding","termid":"GO:0042826"}


id: GO:0008237
data:
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id: FYPO:0000296
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115306],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115228,115201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115500],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115362],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115330,115091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115307],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the organization of the actin cytoskeleton. 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id: PBO:0077449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 182","termid":"PBO:0077449"}


id: GO:0044877
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id: GO:0032943
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id: GO:0071597
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id: PBO:0045387
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id: PBO:0012268
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id: PBO:0060248
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id: FYPO:0000664
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id: PBO:0060455
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id: GO:0060454
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id: GO:1905445
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id: PBO:0080640
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id: GO:0102058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-leucine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-leucine.","definition_xrefs":["PMID:17291501","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-leucine synthetase activity (obsolete GO:0102058)","termid":"GO:0102058"}


id: PBO:0082612
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id: PR:P14068
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id: PBO:0069716
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id: GO:0046156
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id: PR:P78870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.07c","synonyms":[{"name":"FALDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd1","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78870"}


id: GO:0071259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnetism","termid":"GO:0071000"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnetism","synonyms":[{"name":"cellular response to magnetic stimulus","type":"exact"}],"termid":"GO:0071259"}


id: PBO:0041498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 60","termid":"PBO:0041498"}


id: GO:0035133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic caudal fin morphogenesis","termid":"GO:0035133"}


id: SO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenosine","secondary_identifiers":["RNAMOD:003"],"synonyms":[{"name":"N6 methyladenosine","type":"exact"},{"name":"N6-methyladenosine","type":"exact"},{"name":"m6A","type":"exact"}],"termid":"SO:0001297"}


id: PBO:0088261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruA family tRNA/ U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0088261"}


id: PBO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83C antisense RNA 1","termid":"PBO:0046966"}


id: GO:0003880
data:
  {"annotated_genes":["SJAG_01261","SJAG_02660","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109477,101733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[83275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the oxygen atom of a carboxyl group at the C-terminal of a protein.","definition_xrefs":["PMID:8428937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0003824","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"protein C-terminal carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal protein carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0003880","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: GO:0008756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + ATP + CoA = 2-succinylbenzoyl-CoA + AMP + diphosphate.","definition_xrefs":["EC:6.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"o-succinylbenzoate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R04030","MetaCyc:O-SUCCINYLBENZOATE-COA-LIG-RXN","RHEA:17009"],"synonyms":[{"name":"2-succinylbenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"OSB-CoA synthetase activity","type":"related"},{"name":"o-succinylbenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"o-succinylbenzoyl-CoA synthetase activity","type":"related"},{"name":"o-succinylbenzoyl-coenzyme A synthetase activity","type":"related"}],"termid":"GO:0008756"}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: GO:0070496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"positively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"positive regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"positive regulation of thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070496"}


id: FYPO:0003611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during meiosis","synonyms":[{"name":"increased protein accumulation during meiosis","type":"related"},{"name":"increased protein level during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003611"}


id: GO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.","definition_xrefs":["RHEA:21136","EC:2.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"carnitine O-acetyltransferase activity","secondary_identifiers":["GO:0004093","Reactome:R-HSA-390291","KEGG_REACTION:R02396","GO:0004094","MetaCyc:CARNITINE-O-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-390284"],"synonyms":[{"name":"CATC","type":"related"},{"name":"acetyl-CoA-carnitine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:carnitine O-acetyltransferase activity","type":"related"},{"name":"acetylcarnitine transferase activity","type":"related"},{"name":"carnitine O-acetyltransferase I activity","type":"narrow"},{"name":"carnitine O-acetyltransferase II activity","type":"narrow"},{"name":"carnitine acetyl coenzyme A transferase activity","type":"related"},{"name":"carnitine acetylase activity","type":"related"},{"name":"carnitine acetyltransferase activity","type":"related"},{"name":"carnitine-acetyl-CoA transferase activity","type":"related"}],"termid":"GO:0004092"}


id: GO:0032593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2.","definition_xrefs":["PMID:17644329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"insulin-responsive compartment","synonyms":[{"name":"GLUT4 storage compartment","type":"exact"},{"name":"GSC","type":"related"},{"name":"IRC","type":"related"}],"termid":"GO:0032593"}


id: PBO:0046795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F2R like trypsin receptor 1","termid":"PBO:0046795"}


id: PBO:0080601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR35 divergent transcript","termid":"PBO:0080601"}


id: GO:0006886
data:
  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id: FYPO:0004411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing oxaliplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on oxaliplatin","synonyms":[{"name":"normal cell population growth in presence of oxaliplatin","type":"exact"},{"name":"normal cell population growth on oxaliplatin","type":"exact"},{"name":"normal cellular response to oxaliplatin","type":"related"},{"name":"normal vegetative cell population growth on oxaliplatin","type":"exact"}],"termid":"FYPO:0004411"}


id: FYPO:0005635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0005635"}


id: GO:0080086
data:
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id: PBO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 4","termid":"PBO:0045065"}


id: GO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via secreted substance (obsolete GO:0052046)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"}],"termid":"GO:0052046"}


id: GO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a renal artery is generated and organized. Renal arteries supply the kidneys with blood.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal artery morphogenesis","termid":"GO:0061441"}


id: MOD:00363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-selenocysteine residues to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#SEC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"},{"relation_name":"is_a","term_name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Sec)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00363"}


id: GO:0018752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-caprolactam + H2O = H+ + 6-aminohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"epsilon-caprolactam lactamase activity","secondary_identifiers":["MetaCyc:R561-RXN"],"termid":"GO:0018752"}


id: GO:0044281
data:
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id: PBO:0077649
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 1","termid":"PBO:0077649"}


id: PBO:0045240
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 8","termid":"PBO:0045240"}


id: PBO:0043248
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLDN7 pseudogene 1","termid":"PBO:0043248"}


id: PBO:0044106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member C1","termid":"PBO:0044106"}


id: GO:0051140
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell proliferation","synonyms":[{"name":"regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"regulation of NK T-cell proliferation","type":"exact"},{"name":"regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"regulation of NKT cell proliferation","type":"exact"},{"name":"regulation of NT cell proliferation","type":"exact"},{"name":"regulation of natural T cell proliferation","type":"exact"},{"name":"regulation of natural killer T cell proliferation","type":"exact"}],"termid":"GO:0051140"}


id: PBO:0055581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3017","termid":"PBO:0055581"}


id: PBO:0029935
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spheroid_cell","termid":"PBO:0029935"}


id: GO:0044208
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  {"annotated_genes":["SJAG_02850","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84327,99176],"is_not":false,"summary":null,"term":"GO:0044208"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from inosine 5'-monophosphate (IMP).","definition_xrefs":["GOC:ecd","PMID:10888601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"'de novo' AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044208","terms_by_termid":{"GO:0044208":null}}


id: GO:0022842
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: PBO:0068025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 330","termid":"PBO:0068025"}


id: PBO:0089277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex catalytic subunit Naa20","termid":"PBO:0089277"}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PMID:26358720","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: PBO:0076218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase upregulated non-coding 1","termid":"PBO:0076218"}


id: PBO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035936"}


id: PBO:0086396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytoplasmic short-chain dehydrogenase/reductase","termid":"PBO:0086396"}


id: GO:0044331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via a cadherin, transmembrane proteins having repeating extracellular calcium ion binding domains.","definition_xrefs":["GOC:ha","GOC:hjd","PMID:10923970","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}


id: PBO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(X)(q27.3) A","termid":"PBO:0047963"}


id: GO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cement gland over time, from its formation to the mature structure. The cement gland is a simple mucus-secreting organ positioned at the anterior of amphibious embryos. The cement gland attaches the newly hatched embryo to a support before the hatchling can swim well or feed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cement gland development","termid":"GO:0071570"}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: PBO:0111912
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0111912"}


id: GO:0097465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Spine emanating from the cell soma of a neuron.","definition_xrefs":["NIF_Subcellular:sao2048514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic spine","termid":"GO:0097465"}


id: GO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine metabolic process","secondary_identifiers":["GO:0006645"],"synonyms":[{"name":"ethanolamine metabolism","type":"exact"}],"termid":"GO:0006580"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["GOC:dos","ISBN:978-0-07-181001-2","Wikipedia:Neuropeptide&oldid=713905176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: PATO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001047 absolute resistance (obsolete PATO:0001047)","termid":"PATO:0001047"}


id: PBO:0006624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase (predicted)","termid":"PBO:0006624"}


id: PBO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-trimethylguanosine cap","termid":"PBO:0034716"}


id: GO:1903465
data:
  {"annotated_genes":["SJAG_03695","SJAG_03048","SJAG_02074","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98105],"is_not":false,"summary":null,"term":"GO:1903465"},{"annotations":[107937,113271,99073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000058","PMID:1234","GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle DNA replication","termid":"GO:1903463"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"activation of DNA replication involved in S phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic cell cycle DNA replication","type":"narrow"},{"name":"activation of mitotic nuclear cell cycle DNA replication","type":"narrow"},{"name":"activation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"positive regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up-regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"upregulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903465","terms_by_termid":{"GO:1903465":null,"GO:1903468":null}}


id: FYPO:0001608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glutamate level","termid":"FYPO:0001563"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased vacuolar glutamate level","synonyms":[{"name":"decreased level of glutamate in vacuole","type":"exact"},{"name":"decreased vacuolar L-glutamate level","type":"exact"},{"name":"decreased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"decreased vacuolar glutamic acid level","type":"related"},{"name":"reduced level of glutamate in vacuole","type":"exact"},{"name":"reduced vacuolar glutamate level","type":"exact"}],"termid":"FYPO:0001608"}


id: PR:O13286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin-like enhancer protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01936","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein srw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.13c","secondary_identifiers":["UniProtKB:O13286"],"synonyms":[{"name":"Spom972h-TLE3","type":"exact"},{"name":"suppressor of rad/wee1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13286"}


id: GO:0052239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052239)","synonyms":[{"name":"negative chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052239"}


id: PBO:0057577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 874","termid":"PBO:0057577"}


id: GO:0031653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism releases excess heat to the environment, thereby lowering its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat dissipation","termid":"GO:0031653"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_01838","SJAG_06135","SJAG_07008","SJAG_04899","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105591,112661,84499,92488,96386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null}}


id: PBO:0027281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_M26_site","termid":"PBO:0027281"}


id: PBO:0050838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IARS2 pseudogene 1","termid":"PBO:0050838"}


id: PR:Q9P7S9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies4 gene.","definition_xrefs":["UniProtKB:Q9P7S9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.04","synonyms":[{"name":"Spom972h-ies4","type":"exact"}],"termid":"PR:Q9P7S9"}


id: PBO:0044629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidine kinase","termid":"PBO:0044629"}


id: _global:assayed_transcript
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a transcript, such as a gene product or transcript type in SO, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_transcript","termid":"_global:assayed_transcript"}


id: FYPO:0001773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a tRNA methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished tRNA methyltransferase activity","synonyms":[{"name":"tRNA methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0001773"}


id: PBO:0079881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 2","termid":"PBO:0079881"}


id: PBO:0080630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 77","termid":"PBO:0080630"}


id: PBO:0028356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphatase_activity","termid":"PBO:0028356"}


id: PBO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase, decarboxylating","termid":"PBO:0003092"}


id: PBO:0085708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in silencing at mating-type loci HML and HMR; recruitment to silent chromatin requires interactions with Orc1p and with Sir4p, through a common Sir1p domain; binds to centromeric chromatin","termid":"PBO:0085708"}


id: PBO:0059754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 28","termid":"PBO:0059754"}


id: SO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small nuclear RNA (snRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_encoding","synonyms":[{"name":"snRNA encoding","type":"exact"}],"termid":"SO:0000623"}


id: FYPO:0005914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are longer than normal.","definition_xrefs":["PomBase:mah","PMID:19139281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated linear element","synonyms":[{"name":"increased linear element length","type":"exact"},{"name":"long linear element","type":"exact"}],"termid":"FYPO:0005914"}


id: PBO:0066774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 72","termid":"PBO:0066774"}


id: PBO:0040370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 7","termid":"PBO:0040370"}


id: GO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at peptide bonds with very broad specificity.","definition_xrefs":["EC:3.4.25.1"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase activity (obsolete GO:0004299)","synonyms":[{"name":"multicatalytic endopeptidase","type":"related"},{"name":"proteasome","type":"related"},{"name":"proteasome endopeptidase activity","type":"exact"},{"name":"proteasome endopeptidase complex","type":"related"}],"termid":"GO:0004299"}


id: GO:1905875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic density organization.","definition_xrefs":["PMID:21887379","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"negatively_regulates","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of postsynaptic density organization","synonyms":[{"name":"down regulation of PSD organization","type":"exact"},{"name":"down regulation of post synaptic density organization","type":"exact"},{"name":"down regulation of post-synaptic density organization","type":"exact"},{"name":"down regulation of postsynaptic density organisation","type":"exact"},{"name":"down regulation of postsynaptic density organization","type":"exact"},{"name":"down-regulation of PSD organization","type":"exact"},{"name":"down-regulation of post synaptic density organization","type":"exact"},{"name":"down-regulation of post-synaptic density organization","type":"exact"},{"name":"down-regulation of postsynaptic density organisation","type":"exact"},{"name":"down-regulation of postsynaptic density organization","type":"exact"},{"name":"downregulation of PSD organization","type":"exact"},{"name":"downregulation of post synaptic density organization","type":"exact"},{"name":"downregulation of post-synaptic density organization","type":"exact"},{"name":"downregulation of postsynaptic density organisation","type":"exact"},{"name":"downregulation of postsynaptic density organization","type":"exact"},{"name":"inhibition of PSD organization","type":"narrow"},{"name":"inhibition of post synaptic density organization","type":"narrow"},{"name":"inhibition of post-synaptic density organization","type":"narrow"},{"name":"inhibition of postsynaptic density organisation","type":"narrow"},{"name":"inhibition of postsynaptic density organization","type":"narrow"},{"name":"negative regulation of PSD organization","type":"exact"},{"name":"negative regulation of post synaptic density organization","type":"exact"},{"name":"negative regulation of post-synaptic density organization","type":"exact"},{"name":"negative regulation of postsynaptic density organisation","type":"exact"}],"termid":"GO:1905875"}


id: PBO:0086538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBR027C is not an essential gene","termid":"PBO:0086538"}


id: GO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanolamine + 1-alkyl-sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.39","MetaCyc:3.1.4.39-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"alkylglycerophosphoethanolamine phosphodiesterase activity","secondary_identifiers":["RHEA:15965"],"synonyms":[{"name":"1-alkyl-sn-glycero-3-phosphoethanolamine ethanolaminehydrolase activity","type":"related"},{"name":"lysophospholipase D activity","type":"related"}],"termid":"GO:0047391"}


id: FYPO:0005572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell periphery","synonyms":[{"name":"normal protein localisation to cell periphery","type":"exact"},{"name":"normal protein localization to cell periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005572"}


id: PBO:0108707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp3","termid":"PBO:0108707"}


id: PATO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closure","termid":"PATO:0000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open","termid":"PATO:0000610"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_04096","SJAG_02532","SJAG_04757","SJAG_00296","SJAG_04698","SJAG_03850","SJAG_03895","SJAG_02877","SJAG_04668","SJAG_02322","SJAG_01400","SJAG_01090","SJAG_00321","SJAG_04892","SJAG_02440","SJAG_03873","SJAG_03631","SJAG_03399","SJAG_05229","SJAG_04028","SJAG_04551","SJAG_02019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099093"},{"annotations":[93006,91256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[87860,87914,95307,110408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[90412,91611,104511,105230,91305,91078,93995,109896,86175,97349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[86681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[109309,86699],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[97875],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[88954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0032472":null,"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0099093":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: PBO:0071624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 43","termid":"PBO:0071624"}


id: GO:0032555
data:
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