# terms

id: PBO:0055137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2556","termid":"PBO:0055137"}


id: PBO:0064200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 8","termid":"PBO:0064200"}


id: PBO:0055981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 4","termid":"PBO:0055981"}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: CL:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.","definition_xrefs":["CARO:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell","termid":"CL:0000000"}


id: GO:0006648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phosphatidylethanolamine biosynthetic process that proceeds via the enzymatic action of dihydrosphingosine phosphate lyase.","definition_xrefs":["PMID:15643073","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine biosynthetic process","termid":"GO:0006646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dihydrosphingosine-1-P pathway","termid":"GO:0006648"}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: GO:0043010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye development","secondary_identifiers":["GO:0031075","GO:0001747"],"termid":"GO:0043010"}


id: PBO:0068378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 175","termid":"PBO:0068378"}


id: PBO:0063848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 1","termid":"PBO:0063848"}


id: PATO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cone_(geometry)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conical","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/d/d2/Cone_3d.png"],"synonyms":[{"name":"cone-shaped","type":"exact"}],"termid":"PATO:0002021"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: PBO:0087457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p","termid":"PBO:0087457"}


id: PBO:0044851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 132","termid":"PBO:0044851"}


id: PBO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene","termid":"PBO:0044856"}


id: GO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BLOC-2 complex, a protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:22511774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BLOC-2 complex binding","termid":"GO:0036461"}


id: GO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by angiotensin that increases the rate of diuresis.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis by angiotensin (obsolete GO:0003102)","synonyms":[{"name":"angiotensin-mediated positive regulation of diuresis","type":"exact"},{"name":"positive regulation of diuresis by angiotensin","type":"exact"}],"termid":"GO:0003102"}


id: PBO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 2","termid":"PBO:0045480"}


id: GO:0035052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","PMID:12397110","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: PBO:0077656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 8","termid":"PBO:0077656"}


id: PBO:0004818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof12","termid":"PBO:0004818"}


id: PBO:0041251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 167","termid":"PBO:0041251"}


id: PBO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Pmp20","termid":"PBO:0015261"}


id: GO:0070413
data:
  {"annotated_genes":["SJAG_00129","SJAG_01862","SJAG_01427","SJAG_01531","SJAG_01646","SJAG_00182","SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73601,87341,88913,92159,92786,96777,107398],"is_not":false,"summary":null,"term":"GO:0070413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jp","GOC:mah","PMID:9797333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolic process","termid":"GO:0005991"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolism in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"trehalose metabolic process involved in response to stress","type":"exact"}],"termid":"GO:0070413","terms_by_termid":{"GO:0070413":null}}


id: GO:0030234
data:
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id: MOD:00829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-serine residue by an ester bond to form S-(L-phenylalaninyl)-L-serine.","definition_xrefs":["PubMed:12591958","RESID:AA0418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-phenylalanyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl serine ester (Ser-Phe)","type":"exact"},{"name":"O-(2-amino-3-phenylpropanoyl)serine","type":"exact"},{"name":"O-(L-phenylalanyl)-L-serine","type":"exact"},{"name":"XLNK1PheOSer","type":"exact"},{"name":"phenylalanine serine ester","type":"exact"}],"termid":"MOD:00829"}


id: PBO:0074773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3F","termid":"PBO:0074773"}


id: GO:0052755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + 2,3-dimethyl-1,4-naphthoquinone = coenzyme F420 + reduced 2,3-dimethyl-1,4-naphthoquinone. Reduced 2,3-dimethyl-1,4-naphthoquinone is also known as 2,3-dimethyl-1,4-hydronaphthoquinone.","definition_xrefs":["GOC:mengo_curators","PMID:10971593","PMID:8055920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:quinone oxidoreductase activity","synonyms":[{"name":"F420H2-dependent quinone oxidoreductase activity","type":"exact"},{"name":"F420H2:2,3-dimethyl-1,4-naphthoquinone oxidoreductase activity","type":"exact"},{"name":"F420H2:quinone oxidoreductase activity","type":"exact"}],"termid":"GO:0052755"}


id: GO:0015271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an outwardly-rectifying voltage-gated channel. An outwardly rectifying current-voltage relation is one where at any given driving force the outward flow of K+ ions exceeds the inward flow for the opposite driving force.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"outward rectifier potassium channel activity","termid":"GO:0015271"}


id: PBO:0055638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3077","termid":"PBO:0055638"}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: PBO:0074014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 5","termid":"PBO:0074014"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: PBO:0028119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028119"}


id: PBO:0081477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 354A","termid":"PBO:0081477"}


id: PBO:0065539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and tensin homolog","termid":"PBO:0065539"}


id: FYPO:0006735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tschimganine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tschimganine","synonyms":[{"name":"resistance to TMN","type":"exact"},{"name":"resistance to tschimganine during mitotic cell cycle","type":"related"},{"name":"resistance to tschimganine during vegetative growth","type":"exact"},{"name":"resistant to tschimganine","type":"exact"}],"termid":"FYPO:0006735"}


id: PBO:0049895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 5","termid":"PBO:0049895"}


id: PBO:0090838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism","termid":"PBO:0090838"}


id: GO:0032969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains MAPKSP1 (MP1, Map2k1ip1) and ROBLD3 (p14, Mapbpip), is anchored to late endosomes, and is involved in selective activation of the ERK1 in ERK/MAPK signaling.","definition_xrefs":["PMID:16227978","PMID:15263099","PMID:17496910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endosomal scaffold complex","synonyms":[{"name":"MP1-p14 scaffolding complex","type":"exact"},{"name":"endosomal adaptor complex","type":"exact"}],"termid":"GO:0032969"}


id: FYPO:0004141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"decreased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"decreased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"decreased glutathione accumulation during nitrogen starvation","type":"related"},{"name":"reduced cellular glutathione level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004141"}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: PBO:0056055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated transcript 1","termid":"PBO:0056055"}


id: PBO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 2","termid":"PBO:0043802"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: PBO:0082080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' exoribonuclease required for 5' end processing of pre-60S rRNA; binds late pre-60S ribosomes, accompanying them from nucleolus to nuclear periphery; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; yeast null mutant is complemented by expression of human homolog NOL12","termid":"PBO:0082080"}


id: PBO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.-.-.-","termid":"PBO:0002900"}


id: GO:0061525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hindgut over time, from its formation to the mature structure. The hindgut is part of the alimentary canal that lies posterior to the midgut.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut development","termid":"GO:0061525"}


id: PBO:0088702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc8","termid":"PBO:0088702"}


id: PBO:0064672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 7","termid":"PBO:0064672"}


id: GO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain","termid":"GO:0021534"}


id: PBO:0069934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1227, pseudogene","termid":"PBO:0069934"}


id: GO:0010641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010641"}


id: PBO:0038816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 3","termid":"PBO:0038816"}


id: PBO:0067872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 174","termid":"PBO:0067872"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:2000166"}


id: GO:0120193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["GOC:krc","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tight junction organization","synonyms":[{"name":"occluding cell junction organization","type":"exact"},{"name":"occluding junction organization","type":"exact"}],"termid":"GO:0120193"}


id: PBO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMDS divergent transcript","termid":"PBO:0048764"}


id: PBO:0041621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP7 divergent transcript","termid":"PBO:0041621"}


id: GO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in females of species in which the female is the heterogametic sex; generally, the sex chromosome that pairs with the Z chromosome in the heterogametic sex. The W chromosome is absent from the cells of males and present in one copy in the somatic cells of females.","definition_xrefs":["ISBN:0321000382","GOC:mr","GOC:mah","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"W chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000804"}


id: PBO:0076410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5 like pseudogene 1","termid":"PBO:0076410"}


id: GO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation.","definition_xrefs":["CL:0000624","GOC:pr","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell costimulation","termid":"GO:0031295"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:0035783"}


id: FYPO:0003905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle pole body morphology during meiosis II","synonyms":[{"name":"normal meiotic SPB morphology during meiosis II","type":"exact"},{"name":"normal meiotic spindle pole body structure during meiosis II","type":"narrow"},{"name":"normal spindle pole body morphology during meiosis II","type":"exact"},{"name":"normal spindle pole body morphology during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003905"}


id: PBO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper regulated Meiotic gene","termid":"PBO:0017540"}


id: GO:0033122
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110980,85154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide catabolic process","termid":"GO:0030812"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"negative regulation of purine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of purine nucleotide breakdown","type":"exact"},{"name":"negative regulation of purine nucleotide catabolism","type":"exact"},{"name":"negative regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033122","terms_by_termid":{"GO:0045820":null}}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: GO:0035420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that contributes to an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in innate immune response (obsolete GO:0035420)","synonyms":[{"name":"MAPKKK cascade involved in innate immune response","type":"exact"}],"termid":"GO:0035420"}


id: PBO:0056735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 4","termid":"PBO:0056735"}


id: GO:1902120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic spindle elongation.","definition_xrefs":["PMID:23370392","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"regulation of meiotic spindle elongation","termid":"GO:1902119"},{"relation_name":"negatively_regulates","term_name":"meiotic spindle elongation","termid":"GO:0051232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic spindle elongation","synonyms":[{"name":"down regulation of meiotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during meiosis","type":"exact"},{"name":"down-regulation of meiotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during meiosis","type":"exact"},{"name":"downregulation of meiotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during meiosis","type":"exact"},{"name":"inhibition of meiotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during meiosis","type":"exact"},{"name":"negative regulation of spindle elongation during meiosis","type":"exact"}],"termid":"GO:1902120"}


id: PBO:0089685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box protein","termid":"PBO:0089685"}


id: MOD:01559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01559"}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: PBO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase acidic","termid":"PBO:0043002"}


id: SO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 5 carbon.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_methylcytosine","secondary_identifiers":["http://www.insdc.org/files/feature_table.html#7.4.2","http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5 methylcytosine","type":"exact"},{"name":"5-mC","type":"exact"},{"name":"m-5C","type":"exact"},{"name":"m5c","type":"exact"}],"termid":"SO:0001918"}


id: PBO:0065128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 1","termid":"PBO:0065128"}


id: GO:0102794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamaldehyde + O2 + H2O = H+ + trans-cinnamate + hydrogen peroxide.","definition_xrefs":["EC:1.2.3.9","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cinnamaldehyde:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-8089"],"termid":"GO:0102794"}


id: PBO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent 3' to 5' DNA helicase Ino80","termid":"PBO:0017840"}


id: GO:1990098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing at least one DNA helicase and one primase. Can also contain associated proteins. The helicase component continues to unwind the double-stranded DNA (dsDNA) and the primase component synthesizes a RNA primer during initiation or restart of replication.","definition_xrefs":["GOC:bhm","PMID:21856207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"core primosome complex","synonyms":[{"name":"core primosome","type":"exact"}],"termid":"GO:1990098"}


id: GO:0052677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NADP+ = D-xylulose + NADPH + H+.","definition_xrefs":["EC:1.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity","secondary_identifiers":["RHEA:21276","MetaCyc:RXN-7971","KEGG_REACTION:R07143"],"synonyms":[{"name":"ARD1p","type":"related"},{"name":"D-arabinitol dehydrogenase 1 activity","type":"broad"},{"name":"D-arabinitol:NADP+ dehydrogenase activity","type":"broad"},{"name":"NADP+-dependent D-arabinitol dehydrogenase activity","type":"broad"}],"termid":"GO:0052677"}


id: SO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_left_handed_three","synonyms":[{"name":"catmat-3l","type":"exact"}],"termid":"SO:0100004"}


id: PBO:0065478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 divergent transcript","termid":"PBO:0065478"}


id: GO:0055103
data:
  {"annotated_genes":["SJAG_00177","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990609"},{"annotations":[101538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ligase.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055103","terms_by_termid":{"GO:0180016":null,"GO:1990609":null}}


id: GO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription regulator activity (obsolete GO:0090046)","synonyms":[{"name":"regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090046"}


id: MOD:01082
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-glycosyloxy- (hexosyl, C6) (of proline)","termid":"MOD:01082"}


id: GO:1900232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single-species biofilm formation","termid":"GO:1900191"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"down regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"down-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"downregulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"inhibition of single-species biofilm formation on inanimate substrate","type":"narrow"}],"termid":"GO:1900232"}


id: PBO:0085999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085999"}


id: PBO:0062986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 1","termid":"PBO:0062986"}


id: MOD:00993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenyl ester","synonyms":[{"name":"OPh","type":"exact"}],"termid":"MOD:00993"}


id: GO:0010990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of SMAD protein complex assembly. SMAD protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SMAD protein complex assembly (obsolete GO:0010990)","termid":"GO:0010990"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: PBO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 1","termid":"PBO:0080180"}


id: GO:0102803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thebaine + 2-oxoglutarate + O2 = oripavine + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.32","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thebane O-demethylase activity","secondary_identifiers":["MetaCyc:RXN-8149"],"termid":"GO:0102803"}


id: PBO:0087273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3C histone deacetylase scaffold; can act as prion [ESI+] (Expressed Subtelomeric Information) that drives emergence and transgenerational inheritance of activated chromatin state; prion conformer is triggered by transient Snt1p phosphorylation upon cell cycle arrest; [ESI+] reshapes the activity Set3C, recruiting RNAPII, interfering with Rap1p binding to activate genes in otherwise repressed subtelomeric domains; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087273"}


id: GO:0048708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte differentiation","termid":"GO:0048708"}


id: GO:1990441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","PMID:21113145","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990441)","synonyms":[{"name":"ER stress-induced negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"reduction of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"repression of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"suppression of transcription from RNA polymerase II promoter under ER stress","type":"exact"}],"termid":"GO:1990441"}


id: PBO:0075003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-14","termid":"PBO:0075003"}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: PBO:0063110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated mucin-like protein 1","termid":"PBO:0063110"}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: GO:0033229
data:
  {"annotated_genes":["SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109657,115001],"is_not":false,"summary":null,"term":"GO:0033229"}]},"cv_name":"molecular_function","definition":"Enables the transfer of cysteine from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cysteine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033229","terms_by_termid":{"GO:0033229":null}}


id: FYPO:0003215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein binding during cellular response to hydrogen peroxide","type":"exact"},{"name":"normal protein-protein interaction during cellular response to H2O2","type":"exact"}],"termid":"FYPO:0003215"}


id: PBO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 125","termid":"PBO:0042062"}


id: PBO:0077499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217B","termid":"PBO:0077499"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2EEM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: GO:1904700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a granulosa cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:19208546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell apoptotic process","synonyms":[{"name":"granulosa cell apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904700"}


id: PBO:0040394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 2","termid":"PBO:0040394"}


id: GO:0102501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NADP = NADPH + H+ + D-fructuronate.","definition_xrefs":["PMID:22925190","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-fructuronate reductase activity","secondary_identifiers":["MetaCyc:RXN-14368"],"termid":"GO:0102501"}


id: GO:1901445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to propan-1-ol","termid":"GO:1901445"}


id: PBO:0001287
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves' disease","termid":"PBO:0001287"}


id: PBO:0066459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 12, pseudogene","termid":"PBO:0066459"}


id: GO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-8-methylnaphthalene + O2 = 2-hydroxy-8-methylchromene-2-carboxylate + H+.","definition_xrefs":["UM-BBD_reactionID:r0781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxy-8-methylnaphthalene dioxygenase activity","termid":"GO:0034535"}


id: PBO:0050078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group 20A","termid":"PBO:0050078"}


id: GO:1990889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H4 in which the lysine residue at position 20 has been modified by trimethylation.","definition_xrefs":["PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"H4K20me3 modified histone binding","termid":"GO:1990889"}


id: GO:0032008
data:
  {"annotated_genes":["SJAG_05184","SJAG_02605","SJAG_02424","SJAG_03405","SJAG_03907","SJAG_04496","SJAG_00561","SJAG_00143","SJAG_04910","SJAG_03089","SJAG_05030","SJAG_06588","SJAG_00209","SJAG_03371","SJAG_02231","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100905,102382],"is_not":false,"summary":null,"term":"GO:0032008"},{"annotations":[83457,106415,89905,105120,102967,93671,108782,114361,83755,91731,84887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[102810,86675,93404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03907":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TOR signaling pathway","type":"narrow"},{"name":"positive regulation of TOR signaling cascade","type":"related"},{"name":"positive regulation of TOR signaling pathway","type":"exact"},{"name":"positive regulation of TOR signalling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signalling pathway","type":"exact"},{"name":"stimulation of TOR signaling pathway","type":"narrow"},{"name":"up regulation of TOR signaling pathway","type":"exact"},{"name":"up-regulation of TOR signaling pathway","type":"exact"},{"name":"upregulation of TOR signaling pathway","type":"exact"}],"termid":"GO:0032008","terms_by_termid":{"GO:0032008":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Pos1","termid":"PBO:0016948"}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: PBO:0084160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084160"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: PBO:0041774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 13","termid":"PBO:0041774"}


id: PBO:0068482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 63, pseudogene","termid":"PBO:0068482"}


id: GO:0071887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a leukocyte, an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.","definition_xrefs":["GOC:BHF","CL:0000738","GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte apoptotic process","synonyms":[{"name":"leukocyte apoptosis","type":"narrow"}],"termid":"GO:0071887"}


id: GO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["PMID:20813909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastoglobule organization","synonyms":[{"name":"plastoglobule organisation","type":"exact"}],"termid":"GO:0080177"}


id: GO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Rel Homology Domain (RHD) of a protein. The RHD is found in a family of eukaryotic transcription factors, which includes NF-kappaB, Dorsal, Relish and NFAT.","definition_xrefs":["InterPro:IPR011539","Wikipedia:Rel_homology_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Rel homology domain binding","synonyms":[{"name":"RHD binding","type":"exact"}],"termid":"GO:0044197"}


id: PBO:0062808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 8","termid":"PBO:0062808"}


id: PBO:0051297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-32 (pseudogene)","termid":"PBO:0051297"}


id: PBO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 2","termid":"PBO:0050608"}


id: PBO:0078325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRDN antisense RNA 1","termid":"PBO:0078325"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04532","PANTHER:PTHR23359:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PBO:0088822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Psk1","termid":"PBO:0088822"}


id: PBO:0079822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like autophagy activating kinase 1","termid":"PBO:0079822"}


id: GO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + ent-kaur-16-ene + oxygen = H2O + NADP+ + ent-kaur-16-en-19-ol.","definition_xrefs":["MetaCyc:1.14.13.78-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-kaurene oxidase activity","secondary_identifiers":["RHEA:32323","EC:1.14.14.86"],"termid":"GO:0052615"}


id: SO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the Alu family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu_insertion","synonyms":[{"name":"Alu insertion","type":"exact"}],"termid":"SO:0002063"}


id: PBO:0089534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap1","termid":"PBO:0089534"}


id: GO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}


id: PBO:0003922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Aim27 (predicted)","termid":"PBO:0003922"}


id: PBO:0049936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP like 2","termid":"PBO:0049936"}


id: GO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of natural killer cell tolerance induction","termid":"GO:0002871"},{"relation_name":"positively_regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell tolerance induction","synonyms":[{"name":"activation of natural killer cell tolerance induction","type":"narrow"},{"name":"positive regulation of NK cell tolerance induction","type":"exact"},{"name":"stimulation of natural killer cell tolerance induction","type":"narrow"},{"name":"up regulation of natural killer cell tolerance induction","type":"exact"},{"name":"up-regulation of natural killer cell tolerance induction","type":"exact"},{"name":"upregulation of natural killer cell tolerance induction","type":"exact"}],"termid":"GO:0002873"}


id: PBO:0080678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whirlin","termid":"PBO:0080678"}


id: PBO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein","termid":"PBO:0004127"}


id: GO:1901229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901229)","synonyms":[{"name":"regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901229"}


id: PBO:0044822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109E (pseudogene)","termid":"PBO:0044822"}


id: GO:0006665
data:
  {"annotated_genes":["SJAG_01356","SJAG_03953","SJAG_05311","SJAG_00261","SJAG_03015","SJAG_03018","SJAG_03690","SJAG_01300","SJAG_02590","SJAG_02488","SJAG_01219","SJAG_01057","SJAG_04986","SJAG_04178","SJAG_02842","SJAG_00176","SJAG_03076","SJAG_04913","SJAG_00519","SJAG_02429","SJAG_00506","SJAG_02085","SJAG_01857","SJAG_02168","SJAG_02305","SJAG_02706","SJAG_04550","SJAG_04878","SJAG_02885","SJAG_03509","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97198],"is_not":false,"summary":null,"term":"GO:0006665"},{"annotations":[110760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006666"},{"annotations":[101320,104665,105579,105938,87396,88344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[97885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006672"},{"annotations":[90752,93156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006673"},{"annotations":[91356,86218,90868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[108452,87292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"},{"annotations":[104666,85296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[94530,97887,87440,84965,95934,89132,105580,93157,103356,105488,113512,101684,90753,86075,87293,108453,110762,97131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030148"},{"annotations":[101321,105581,101789,92544,88345,93319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[95935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006670"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00261":null,"SJAG_00506":null,"SJAG_00519":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03018":null,"SJAG_03076":null,"SJAG_03509":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingolipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingolipid metabolism","type":"exact"}],"termid":"GO:0006665","terms_by_termid":{"GO:0006665":null,"GO:0006666":null,"GO:0006670":null,"GO:0006672":null,"GO:0006673":null,"GO:0006675":null,"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0046521":null,"GO:0051999":null}}


id: GO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["PMID:10967424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"},{"relation_name":"is_a","term_name":"DNA damage response, signal transduction resulting in transcription","termid":"GO:0042772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:0006978"}


id: GO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-29 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-29 production","secondary_identifiers":["GO:0072632"],"synonyms":[{"name":"IL-29 production","type":"exact"},{"name":"IL29 production","type":"exact"},{"name":"interferon lambda 1 production","type":"exact"},{"name":"interleukin-29 secretion","type":"narrow"}],"termid":"GO:0072631"}


id: PBO:0063578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 1","termid":"PBO:0063578"}


id: GO:1990385
data:
  {"annotated_genes":["SJAG_04412","SJAG_03073","SJAG_02807","SJAG_00930","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97137,99300,105060,112669,114679],"is_not":false,"summary":null,"term":"GO:1990385"}]},"cv_name":"cellular_component","definition":"The area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:12707312","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01837":null,"SJAG_02807":null,"SJAG_03073":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990385","terms_by_termid":{"GO:1990385":null}}


id: PBO:0068079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 385","termid":"PBO:0068079"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: GO:1990078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that inhibits multiple events of replication initiation during one replication cycle.","definition_xrefs":["PMID:21708944","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"replisome","termid":"GO:0030894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"replication inhibiting complex","termid":"GO:1990078"}


id: PBO:0065334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 58","termid":"PBO:0065334"}


id: GO:0018778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroacetate + 2 H2O = 3 H+ + 3 Cl- + oxalate.","definition_xrefs":["UM-BBD_reactionID:r0382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"DL-2 haloacid dehalogenase activity","secondary_identifiers":["EC:3.8.1.10","MetaCyc:RXN-9150"],"termid":"GO:0018778"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: GO:0070070
data:
  {"annotated_genes":["SJAG_01939","SJAG_05306","SJAG_04454","SJAG_00301","SJAG_00771","SJAG_06514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112553],"is_not":false,"summary":null,"term":"GO:0070070"},{"annotations":[110160,97710,106035,109057,114314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00771":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"related"},{"name":"V-ATPase complex assembly","type":"related"}],"termid":"GO:0070070","terms_by_termid":{"GO:0070070":null,"GO:0070072":null}}


id: PBO:0013058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap145","termid":"PBO:0013058"}


id: PBO:0017734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR ubiquitin-protein ligase E3 Ubr11","termid":"PBO:0017734"}


id: GO:0019687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate from other compounds, including acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"pyruvate biosynthetic process","termid":"GO:0042866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyruvate biosynthetic process from acetate","synonyms":[{"name":"pyruvate anabolism from acetate","type":"exact"},{"name":"pyruvate formation from acetate","type":"exact"},{"name":"pyruvate synthesis from acetate","type":"exact"}],"termid":"GO:0019687"}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:26375259","PMID:22002608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: GO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + H+ = CO2 + dopamine.","definition_xrefs":["RHEA:12272","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-dopa decarboxylase activity","synonyms":[{"name":"4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"DDC activity","type":"exact"},{"name":"DOPA decarboxylase activity","type":"related"}],"termid":"GO:0036468"}


id: PR:O94504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trx2 gene.","definition_xrefs":["UniProtKB:O94504","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.07c","synonyms":[{"name":"Spom972h-trx2","type":"exact"},{"name":"Trx-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94504"}


id: SO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mathematically defined repeat (MDR) is a experimental feature that is determined by querying overlapping oligomers of length k against a database of shotgun sequence data and identifying regions in the query sequence that exceed a statistically determined threshold of repetitiveness.","definition_xrefs":["SO:jestill"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mathematically_defined_repeat","synonyms":[{"name":"mathematically defined repeat","type":"exact"}],"termid":"SO:0001642"}


id: GO:0048791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a neurotransmitter into the synaptic cleft by exocytosis of synaptic vesicles, where the release step is dependent on a rise in cytosolic calcium ion levels.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"},{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}


id: PBO:0070723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 28","termid":"PBO:0070723"}


id: PBO:0069423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 686, pseudogene","termid":"PBO:0069423"}


id: GO:2000639
data:
  {"annotated_genes":["SJAG_00642","SJAG_00293","SJAG_01253"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86721,101695,107604],"is_not":false,"summary":null,"term":"GO:2000639"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of SREBP signaling pathway","termid":"GO:2000638"},{"relation_name":"negatively_regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_01253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000639","terms_by_termid":{"GO:2000639":null}}


id: GO:0018411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by amino acid glucuronidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glucuronidation","synonyms":[{"name":"protein amino acid glucuronidation","type":"exact"}],"termid":"GO:0018411"}


id: GO:0034855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androst-4-ene-3,17-dione + O2 + 2 H+ + 2 e- = 9alpha-hydroxy-4-androstene-3,17-dione + H2O.","definition_xrefs":["UM-BBD_reactionID:r1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-AD 9alpha-hydroxylase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0034855"}


id: SO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not affect the function of the gene or cause disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign_variant","synonyms":[{"name":"benign variant","type":"exact"}],"termid":"SO:0001770"}


id: GO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + pentanoyl-CoA = 3-propylmalate + CoA + H+.","definition_xrefs":["RHEA:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3-propylmalate synthase activity","secondary_identifiers":["KEGG_REACTION:R03040","EC:2.3.3.12","MetaCyc:3-PROPYLMALATE-SYNTHASE-RXN"],"synonyms":[{"name":"3-(n-propyl)-malate synthase activity","type":"related"},{"name":"3-propylmalate glyoxylate-lyase (CoA-pentanoylating) activity","type":"related"},{"name":"N-propylmalate synthase activity","type":"related"},{"name":"beta-n-propylmalate synthase activity","type":"related"},{"name":"pentanoyl-CoA:glyoxylate C-pentanoyltransferase (thioester-hydrolysing, 1-carboxybutyl-forming)","type":"related"}],"termid":"GO:0050442"}


id: PBO:0040225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1 pseudogene 1","termid":"PBO:0040225"}


id: PBO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 7","termid":"PBO:0043701"}


id: GO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:signaling","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in heart jogging (obsolete GO:0003302)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003302"}


id: GO:0009826
data:
  {"annotated_genes":["SJAG_02392","SJAG_04509","SJAG_00244","SJAG_03581","SJAG_02169","SJAG_01017","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85328,91468,90171],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[83324,89604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[86206],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111027],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell elongation","type":"narrow"},{"name":"cell growth along one axis","type":"exact"},{"name":"cell growth in one dimension","type":"exact"},{"name":"cell morphogenesis by unidimensional growth","type":"exact"},{"name":"polar cell growth","type":"exact"},{"name":"polarized cell growth","type":"exact"}],"termid":"GO:0009826","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: GO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.","definition_xrefs":["EC:4.2.3.16","MetaCyc:4.2.3.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(4S)-limonene synthase activity","secondary_identifiers":["RHEA:12869"],"synonyms":[{"name":"(-)-(4S)-limonene synthase activity","type":"exact"},{"name":"4S-(-)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]","type":"related"},{"name":"geranyldiphosphate diphosphate lyase (limonene forming)","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]","type":"related"}],"termid":"GO:0050552"}


id: GO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brood size","termid":"GO:0060378"}


id: GO:0045785
data:
  {"annotated_genes":["SJAG_02380","SJAG_03802","SJAG_00910","SJAG_03484","SJAG_04191","SJAG_01253"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104483],"is_not":false,"summary":null,"term":"GO:0045785"},{"annotations":[104606,112144,110055,104484,101696,107259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell adhesion","type":"narrow"},{"name":"stimulation of cell adhesion","type":"narrow"},{"name":"up regulation of cell adhesion","type":"exact"},{"name":"up-regulation of cell adhesion","type":"exact"},{"name":"upregulation of cell adhesion","type":"exact"}],"termid":"GO:0045785","terms_by_termid":{"GO:0045785":null,"GO:1900735":null}}


id: GO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion.","definition_xrefs":["GOC:krc","GOC:cilia","ISBN:0815316194","GOC:hla"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dynein complex","termid":"GO:0030286"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"axonemal dynein complex","synonyms":[{"name":"axonemal dynein heavy chain","type":"narrow"},{"name":"axonemal dynein intermediate chain","type":"narrow"},{"name":"axonemal dynein intermediate light chain","type":"narrow"},{"name":"axonemal dynein light chain","type":"narrow"}],"termid":"GO:0005858"}


id: SO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: PATO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal","synonyms":[{"name":"aberrant","type":"related"},{"name":"atypia","type":"related"},{"name":"atypical","type":"related"},{"name":"defective","type":"related"}],"termid":"PATO:0000460"}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: PBO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2","termid":"PBO:0045994"}


id: PBO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-65 (pseudogene)","termid":"PBO:0051475"}


id: PBO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_import","termid":"PBO:0030492"}


id: GO:0019981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-6 binding","synonyms":[{"name":"IL-6 binding","type":"exact"}],"termid":"GO:0019981"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: PBO:0085819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0085819"}


id: PBO:0048025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY like transcription coactivator","termid":"PBO:0048025"}


id: PBO:0091835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf1, reactive intermediate imine deaminase A homolog Mmf1","termid":"PBO:0091835"}


id: FYECO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ICRF-193 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ICRF-193","termid":"FYECO:0000342"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: GO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-glutamine = 2-oxoglutaramate + L-phenylalanine.","definition_xrefs":["RHEA:17593","EC:2.6.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"glutamine-phenylpyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.64-RXN","KEGG_REACTION:R01375"],"synonyms":[{"name":"L-glutamine:phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine transaminase K activity","type":"related"},{"name":"glutamine--phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047316"}


id: PBO:0083684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal subunit of membrane-associated retromer complex; required for retrograde transport; receptor that recognizes retrieval signals on cargo proteins, forms subcomplex with Vps26p and Vps29p that selects cargo proteins for retrieval; interacts with Ypt7p; overexpression of wild-type human VPS35 or Parkinson's-associated vps35-D686N or vps35-P299S variants complements Ni2+ resistance and Cd2+ sensitivity of yeast vps35 null mutant","termid":"PBO:0083684"}


id: PBO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracisternal A particle-promoted polypeptide","termid":"PBO:0051770"}


id: GO:0006829
data:
  {"annotated_genes":["SJAG_02968","SJAG_01990","SJAG_00328","SJAG_01078","SJAG_04185","SJAG_01803","SJAG_00222","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[109158,99946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[89357,89356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[85923,100087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[100088,85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062111"},{"annotations":[100089,96945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of zinc (Zn II) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"zinc ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc II ion transport","type":"exact"},{"name":"zinc transport","type":"exact"}],"termid":"GO:0006829","terms_by_termid":{"GO:0062111":null,"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: GO:0004070
data:
  {"annotated_genes":["SJAG_00964","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88993,102329],"is_not":false,"summary":null,"term":"GO:0004070"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H+ + phosphate.","definition_xrefs":["RHEA:20013","EC:2.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aspartate carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01397","MetaCyc:ASPCARBTRANS-RXN","Reactome:R-HSA-73573"],"synonyms":[{"name":"ATCase activity","type":"related"},{"name":"L-aspartate transcarbamoylase activity","type":"related"},{"name":"L-aspartate transcarbamylase activity","type":"related"},{"name":"aspartate carbamyltransferase activity","type":"related"},{"name":"aspartate transcarbamoylase activity","type":"related"},{"name":"aspartate transcarbamylase activity","type":"related"},{"name":"aspartic acid transcarbamoylase activity","type":"related"},{"name":"aspartic carbamyltransferase activity","type":"related"},{"name":"aspartic transcarbamylase activity","type":"related"},{"name":"carbamoyl-phosphate:L-aspartate carbamoyltransferase activity","type":"related"},{"name":"carbamoylaspartotranskinase activity","type":"related"},{"name":"carbamylaspartotranskinase activity","type":"related"}],"termid":"GO:0004070","terms_by_termid":{"GO:0004070":null}}


id: PBO:0052032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JRK like","termid":"PBO:0052032"}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: PBO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imatinib upregulated ABL suppressing lncRNA 1","termid":"PBO:0051967"}


id: FYPO:0001793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell shows increased resistance to conditions that degrade the cell wall.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"resistant to cell wall digestion","synonyms":[{"name":"resistant to cell wall digestion during mitotic cell cycle","type":"related"},{"name":"resistant to cell wall digestion during vegetative growth","type":"exact"}],"termid":"FYPO:0001793"}


id: GO:0050157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = D-ornithine.","definition_xrefs":["MetaCyc:ORNITHINE-RACEMASE-RXN","EC:5.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ornithine racemase activity","secondary_identifiers":["RHEA:11584"],"termid":"GO:0050157"}


id: PBO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member C","termid":"PBO:0047249"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_03683","SJAG_01805","SJAG_02814","SJAG_00794","SJAG_02624","SJAG_03540","SJAG_04076","SJAG_01613","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89382,90928,94908,96079,98163,104993,111918,114130,114657],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:10366596","PMID:9009280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: PBO:0077125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 4","termid":"PBO:0077125"}


id: PBO:0046695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase","termid":"PBO:0046695"}


id: FYPO:0003579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during meiosis","synonyms":[{"name":"normal RNA accumulation during meiosis","type":"related"},{"name":"normal RNA level during meiotic nuclear division","type":"exact"},{"name":"normal cellular RNA level during meiosis","type":"exact"},{"name":"normal mRNA level during meiosis","type":"narrow"},{"name":"normal transcript level during meiosis","type":"exact"}],"termid":"FYPO:0003579"}


id: GO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving iron that activates or increases the rate of translational initiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by iron","termid":"GO:0006447"},{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational initiation by iron","synonyms":[{"name":"activation of translational initiation by iron","type":"narrow"},{"name":"stimulation of translational initiation by iron","type":"narrow"},{"name":"up regulation of translational initiation by iron","type":"exact"},{"name":"up-regulation of translational initiation by iron","type":"exact"},{"name":"upregulation of translational initiation by iron","type":"exact"}],"termid":"GO:0045994"}


id: GO:1902951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["GO_REF:0000058","PMID:24328732","GOC:TermGenie","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of dendritic spine maintenance","termid":"GO:1902950"},{"relation_name":"negatively_regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine maintenance","synonyms":[{"name":"down regulation of dendritic spine maintenance","type":"exact"},{"name":"down-regulation of dendritic spine maintenance","type":"exact"},{"name":"downregulation of dendritic spine maintenance","type":"exact"},{"name":"inhibition of dendritic spine maintenance","type":"narrow"}],"termid":"GO:1902951"}


id: PBO:0029273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029273"}


id: GO:0010499
data:
  {"annotated_genes":["SJAG_00591","SJAG_00837","SJAG_05252","SJAG_02625"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70537,74259,75610,77226],"is_not":false,"summary":null,"term":"GO:0010499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteasomal ubiquitin-independent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010499","terms_by_termid":{"GO:0010499":null}}


id: PBO:0081816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 9, Y-linked","termid":"PBO:0081816"}


id: GO:0098631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on a cell surface to an adhesion molecule on another cell surface or an external substrate, to mediate adhesion of the cell to the external substrate or to another cell.","definition_xrefs":["GOC:vw","Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"cell adhesion mediator activity","synonyms":[{"name":"cell adhesion molecule","type":"exact"},{"name":"protein binding involved in cell adhesion","type":"exact"}],"termid":"GO:0098631"}


id: GO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephrogenic mesenchymal tissue are generated and organized. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"nephrogenic mesenchyme development","termid":"GO:0072076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme morphogenesis","termid":"GO:0072134"}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: GO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-glycinamide = glycinamide + peptide. Cleavage of C-terminal glycinamide from a polypeptide.","definition_xrefs":["EC:3.4.19.2","MetaCyc:PEPTIDYL-GLYCINAMIDASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycinamidase activity (obsolete GO:0050426)","synonyms":[{"name":"carboxamidopeptidase activity","type":"related"},{"name":"carboxyamidase activity","type":"related"},{"name":"peptidyl amino acid amide hydrolase activity","type":"related"},{"name":"peptidyl carboxy-amidase activity","type":"related"},{"name":"peptidyl carboxyamidase activity","type":"related"},{"name":"peptidyl-glycinamidase activity","type":"exact"}],"termid":"GO:0050426"}


id: PBO:0059693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 1","termid":"PBO:0059693"}


id: PBO:0027923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level","termid":"PBO:0027923"}


id: GO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage metabolic process","synonyms":[{"name":"root epithelial mucilage metabolism","type":"exact"}],"termid":"GO:0048361"}


id: PR:P36596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squalene synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02641","PANTHER:PTHR11626:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.05c","secondary_identifiers":["UniProtKB:P36596"],"synonyms":[{"name":"FPP:FPP farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SQS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDFT1","type":"exact"},{"name":"farnesyl-diphosphate farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36596"}


id: GO:0061507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2',3' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 2',5' and 3',5' linkages.","definition_xrefs":["PMID:23910378","GOC:dph","PMID:23258412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cyclic GMP-AMP binding","termid":"GO:0140702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2',3'-cyclic GMP-AMP binding","secondary_identifiers":["GO:0098546"],"synonyms":[{"name":"2',3' cGAMP binding","type":"exact"},{"name":"2',3' cyclic GAMP binding","type":"exact"},{"name":"2',3'-cGAMP binding","type":"exact"},{"name":"2',3'-cyclic GAMP binding","type":"exact"},{"name":"2',5-3',5'-cyclic GMP-AMP binding","type":"exact"},{"name":"c[G(2',5')pA(3',5')p] binding","type":"exact"},{"name":"cyclic-GMP-AMP binding","type":"broad"}],"termid":"GO:0061507"}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: GO:1990199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex made up of a dimer of MsbA. Facilitates the export across the plasma membrane of, amongst others, lipid A and lipopolysaccharide. In contrast to most ABC transporter complexes, each chain of the homodimer contains both the transmembrane domain (TMD) and the cytoplasmic ATP-binding domain (NBD).","definition_xrefs":["PMID:18024585","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MsbA transporter complex","synonyms":[{"name":"MsbA complex","type":"exact"},{"name":"MsbA dimer","type":"exact"}],"termid":"GO:1990199"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: FYPO:0003500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"viable elongated multiseptate vegetative cell","termid":"FYPO:0001496"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"viable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0003500"}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: PBO:0035845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035845"}


id: GO:0010324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infolding of a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane invagination","secondary_identifiers":["GO:1902534"],"synonyms":[{"name":"single-organism membrane invagination","type":"related"}],"termid":"GO:0010324"}


id: PATO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of the bearer's long term survival inability.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal (sensu genetics)","termid":"PATO:0000718"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["PMID:9168977","GOC:bhm","PMID:30621730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: PBO:0005480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-glucan synthase Ags1","termid":"PBO:0005480"}


id: PBO:0089244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1","termid":"PBO:0089244"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115570,115384,115386,115363,115364,115365,115366,115367,115368,115369,115380,115381,115375,115568,115362,115481,115373,115571,115359,115370,115569,115120,115209,115482,115374,115567,115376,115377,115378,115379,115385,115387],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04574","SJAG_03689","SJAG_02668","SJAG_03118","SJAG_02621"],"name":"high glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_02409","SJAG_04574","SJAG_03449","SJAG_03356","SJAG_02594","SJAG_01330","SJAG_02392","SJAG_03689","SJAG_03916","SJAG_02763","SJAG_01745","SJAG_00426","SJAG_02621","SJAG_04061"],"single_locus_genotype_uniquenames":["chp1delta","ago1delta","arb1delta","clr4delta","ned1delta","man1delta","dcr1delta","rdp1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","arb2delta","stc1delta","pom1delta","mad2delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0062195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily S member 1","termid":"PBO:0062195"}


id: PBO:0011156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14 (predicted)","termid":"PBO:0011156"}


id: GO:0048132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell asymmetric division","termid":"GO:0098728"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line stem cell asymmetric division","secondary_identifiers":["GO:0048141"],"synonyms":[{"name":"female germ-line stem cell renewal","type":"exact"}],"termid":"GO:0048132"}


id: GO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to folic acid","synonyms":[{"name":"cellular response to folate","type":"exact"},{"name":"cellular response to vitamin B9","type":"exact"}],"termid":"GO:0051593"}


id: PBO:0086794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YAL037W has a paralog, YOR342C, that arose from the whole genome duplication","termid":"PBO:0086794"}


id: FYPO:0005402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is longer than normal.","definition_xrefs":["PMID:12861005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased telomeric 3' overhang length during vegetative growth","synonyms":[{"name":"increased single-stranded telomeric 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomere 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomeric 3' overhang length during mitotic cell cycle","type":"related"},{"name":"increased telomeric G-strand overhang length during vegetative growth","type":"exact"}],"termid":"FYPO:0005402"}


id: GO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An elaborate tubulolamellar membrane system that underlies the postsynaptic cell membrane.","definition_xrefs":["PMID:18171947","PMID:7946331","PMID:1460464","PMID:19244343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"subsynaptic reticulum","synonyms":[{"name":"SSR","type":"exact"}],"termid":"GO:0071212"}


id: GO:0009900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening of an anther, fruit or other structure, which permits the escape of reproductive bodies contained within it.","definition_xrefs":["ISBN:0879015322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehiscence","secondary_identifiers":["Wikipedia:Dehiscence_(botany)"],"termid":"GO:0009900"}


id: GO:0004478
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99149],"is_not":false,"summary":null,"term":"GO:0004478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.","definition_xrefs":["EC:2.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"methionine adenosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5603087","MetaCyc:S-ADENMETSYN-RXN","Reactome:R-HSA-174391","Reactome:R-HSA-5603114","RHEA:21080"],"synonyms":[{"name":"ATP-methionine adenosyltransferase activity","type":"related"},{"name":"ATP:L-methionine S-adenosyltransferase activity","type":"related"},{"name":"AdoMet synthetase activity","type":"related"},{"name":"S-adenosyl-L-methionine synthetase activity","type":"related"},{"name":"S-adenosylmethionine synthase activity","type":"related"},{"name":"S-adenosylmethionine synthetase activity","type":"related"},{"name":"adenosylmethionine synthetase activity","type":"related"},{"name":"methionine S-adenosyltransferase activity","type":"related"},{"name":"methionine-activating enzyme","type":"related"}],"termid":"GO:0004478","terms_by_termid":{"GO:0004478":null}}


id: FYECO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3'5'-cyclic AMP was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["CHEBI:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,5-cyclic AMP","termid":"FYECO:0000056"}


id: PBO:0041445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf85 pseudogene 1","termid":"PBO:0041445"}


id: PR:Q1RKN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tlh2 gene.","definition_xrefs":["UniProtKB:Q1RKN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase tlh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.08c","synonyms":[{"name":"Spom972h-tlh2","type":"exact"},{"name":"Sub-telomeric helicase RecQ homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1RKN3"}


id: GO:0006807
data:
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id: SO:0000778
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendent of a tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic tRNA","type":"exact"}],"termid":"SO:0000778"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: GO:0031348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response","synonyms":[{"name":"down regulation of defense response","type":"exact"},{"name":"down-regulation of defense response","type":"exact"},{"name":"downregulation of defense response","type":"exact"},{"name":"inhibition of defense response","type":"narrow"}],"termid":"GO:0031348"}


id: PBO:0088816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyldihydroxyacetone phosphate reductase Ayr1","termid":"PBO:0088816"}


id: PBO:0051310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-2 (pseudogene)","termid":"PBO:0051310"}


id: PR:O00102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03045","PANTHER:PTHR24067:SF36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.04","secondary_identifiers":["UniProtKB:O00102"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G2","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00102"}


id: PBO:0053065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large tumor suppressor kinase 2","termid":"PBO:0053065"}


id: PATO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenous","termid":"PATO:0002462"}


id: PBO:0091406
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC5L","termid":"PBO:0091406"}


id: GO:0006405
data:
  {"annotated_genes":["SJAG_04622","SJAG_01374","SJAG_03002","SJAG_01652","SJAG_01717","SJAG_04379","SJAG_04645","SJAG_00992","SJAG_04310","SJAG_03729","SJAG_03300","SJAG_01065","SJAG_04360","SJAG_05243","SJAG_03693","SJAG_01584","SJAG_04017","SJAG_04589","SJAG_04115","SJAG_01083","SJAG_04656","SJAG_02274","SJAG_00093","SJAG_02704","SJAG_04721","SJAG_04472","SJAG_00178","SJAG_01715","SJAG_04536","SJAG_04083","SJAG_03283","SJAG_00641","SJAG_03847","SJAG_01529","SJAG_01449","SJAG_00375","SJAG_02520","SJAG_01185","SJAG_04148","SJAG_00471","SJAG_04480","SJAG_04347","SJAG_04202","SJAG_02534","SJAG_03156","SJAG_02757","SJAG_03986","SJAG_03299","SJAG_01013","SJAG_00298","SJAG_02661","SJAG_02209","SJAG_01534","SJAG_05328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84465,89576,90584,91757,92141,96114,100829],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[113385,98739,111489,96868,92742,84947,110868,84455,95451,99712,101161,111525,113256,86087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[98481,104542,105723,107642,101968,110431,97586,106996,106297,112420,114917,103464,114014,87501,102072,87691,101545,111792,112051,112572,92172,110968,86438,98380,112314,109190,111490,97689,99713,92589,97109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[101051,84815,101547,107896,109483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[109484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_01717":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05243":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"RNA export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA export from cell nucleus","type":"exact"},{"name":"RNA export out of nucleus","type":"exact"},{"name":"RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"RNA-nucleus export","type":"exact"}],"termid":"GO:0006405","terms_by_termid":{"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016973":null,"GO:0031990":null,"GO:0071528":null}}


