# terms

id: PBO:0027811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_elongation","termid":"PBO:0027811"}


id: PBO:0086252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that negatively regulates the SCF E3-ubiquitin ligase; regulates by interacting with and preventing neddyation of the cullin subunit, Cdc53p; longevity determinant that is preferentially expressed in young cells; similar to mammalian Cand1","termid":"PBO:0086252"}


id: GO:1900146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:signaling","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900146)","synonyms":[{"name":"down regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"down-regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900146"}


id: PBO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, prl10 was a subsequence of SPNCRNA.1234","termid":"PBO:0010241"}


id: PBO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_metaphase","termid":"PBO:0032719"}


id: PBO:0074015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 6","termid":"PBO:0074015"}


id: GO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by aortic body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in aortic body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during aortic body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003043"}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: GO:0140395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (1'S)-averantin + [reduced NADPH--hemoprotein reductase] + O2 = (1'S,5'S)-5'-hydroxyaverantin + [oxidized NADPH--hemoprotein reductase] + H2O. Involved in aflatoxin biosynthesis.","definition_xrefs":["EC:1.14.14.116","PMID:8368836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"averantin hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9482","RHEA:35575"],"termid":"GO:0140395"}


id: PBO:0072266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 4","termid":"PBO:0072266"}


id: PBO:0029711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_pH","termid":"PBO:0029711"}


id: PBO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2","termid":"PBO:0042946"}


id: PR:O74849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght6 gene.","definition_xrefs":["UniProtKB:O74849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity fructose transporter ght6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.13","synonyms":[{"name":"Spom972h-ght6","type":"exact"},{"name":"hexose transporter 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74849"}


id: FYPO:0003226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle","synonyms":[{"name":"delayed onset of protein localisation to mitotic spindle","type":"exact"},{"name":"delayed onset of protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein mitotic spindle to mitotic spindle during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0003226"}


id: GO:1900958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"positive regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900961"},{"relation_name":"positively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900958"}


id: GO:0015677
data:
  {"annotated_genes":["SJAG_04743","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99555,103690,108713],"is_not":false,"summary":null,"term":"GO:0015677"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02399":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"copper ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion uptake","type":"exact"}],"termid":"GO:0015677","terms_by_termid":{"GO:0015677":null}}


id: PBO:0041877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castor zinc finger 1","termid":"PBO:0041877"}


id: PBO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [acyl-carrier protein] S-malonyltransferase Mct1","termid":"PBO:0090449"}


id: PBO:0029390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029390"}


id: PBO:0083558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PKH2/YOL100W; may interact with ribosomes","termid":"PBO:0083558"}


id: PBO:0027517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0027517"}


id: GO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to hydrogen peroxide (obsolete GO:0036474)","synonyms":[{"name":"cell death in response to H2O2","type":"exact"},{"name":"hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:0036474"}


id: GO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"positively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis","synonyms":[{"name":"activation of chemotaxis","type":"narrow"},{"name":"stimulation of chemotaxis","type":"narrow"},{"name":"up regulation of chemotaxis","type":"exact"},{"name":"up-regulation of chemotaxis","type":"exact"},{"name":"upregulation of chemotaxis","type":"exact"}],"termid":"GO:0050921"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: FYPO:0000977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to silver ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to silver ion","synonyms":[{"name":"normal cellular response to silver ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to silver ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000977"}


id: PBO:0055655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3095","termid":"PBO:0055655"}


id: GO:0060194
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:dph","GOC:jp","GOC:tb","PMID:18075583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ncRNA transcription","termid":"GO:0140747"},{"relation_name":"regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060194","terms_by_termid":{"GO:0060195":null}}


id: MOD:00420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-pyrrolidone-5-carboxylic acid.","definition_xrefs":["RESID:AA0031#GLU","OMSSA:109","PubMed:3473473","PubMed:8382902","DeltaMass:16","Unimod:27#E","PubMed:1836357","PubMed:10214721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"2-pyrrolidone-5-carboxylic acid","termid":"MOD:01048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone-5-carboxylic acid (Glu)","synonyms":[{"name":"(2S)-5-oxo-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"2-oxopyrrolidine-5-carboxylic acid","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid","type":"exact"},{"name":"5-oxoproline","type":"exact"},{"name":"5-oxopyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-pyrrolidone-2-carboxylic acid","type":"exact"},{"name":"Glu->pyro-Glu","type":"related"},{"name":"MOD_RES Pyrrolidone carboxylic acid (Glu)","type":"exact"},{"name":"PCA","type":"exact"},{"name":"PyrGlu(Glu)","type":"exact"},{"name":"Pyro-glu from E","type":"related"},{"name":"Pyroglutamic Acid formed from Glutamic Acid","type":"exact"},{"name":"ntermpeppyroe","type":"exact"},{"name":"pyroglutamic acid","type":"exact"}],"termid":"MOD:00420"}


id: PBO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 7","termid":"PBO:0043816"}


id: PBO:0071910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 49","termid":"PBO:0071910"}


id: GO:0016858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Racemase and epimerase activity on compounds other than amino acids, hydroxy acids, carbohydrates or their derivatives.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase and epimerase activity, acting on other compounds (obsolete GO:0016858)","synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"exact"}],"termid":"GO:0016858"}


id: GO:0102082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-demethylrebeccamycin + S-adenosyl-L-methionine = H+ + rebeccamycin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.164","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"demethylrebeccamycin--D-glucose O-methyltransferase activity","secondary_identifiers":["RHEA:27353","MetaCyc:RXN-10847"],"termid":"GO:0102082"}


id: PBO:0029302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall","termid":"PBO:0029302"}


id: GO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS).","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"acetylcholine secretion","termid":"GO:0061526"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}


id: GO:0002854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell mediated cytotoxicity directed against a tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated cytotoxicity","termid":"GO:0001916"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immune response to tumor cell","termid":"GO:0002842"},{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002852"},{"relation_name":"positively_regulates","term_name":"T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of T cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of T cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002854"}


id: GO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sulfur utilization","synonyms":[{"name":"down regulation of sulfur utilization","type":"exact"},{"name":"down-regulation of sulfur utilization","type":"exact"},{"name":"downregulation of sulfur utilization","type":"exact"},{"name":"inhibition of sulfur utilization","type":"narrow"},{"name":"negative regulation of sulphur utilization","type":"exact"}],"termid":"GO:0045882"}


id: PBO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase (predicted)","termid":"PBO:0000422"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: GO:0006984
data:
  {"annotated_genes":["SJAG_01253","SJAG_01657","SJAG_00642","SJAG_04151","SJAG_02703","SJAG_01585","SJAG_01632","SJAG_02682","SJAG_04018","SJAG_01150","SJAG_02104","SJAG_03501","SJAG_05286","SJAG_03345","SJAG_03302","SJAG_00718","SJAG_01307","SJAG_02318","SJAG_00293","SJAG_03568","SJAG_05304","SJAG_04573","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112882],"is_not":false,"summary":null,"term":"GO:0006984"},{"annotations":[101695,107604,86721],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[112997,89270,89268,109386,89269,109387,109385],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000640"},{"annotations":[97838,89469,101641,84727,105717,108480,85113,99741,114217,93487,84442,114434,108738,88151,112396,112999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032933"}]},"cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the endoplasmic reticulum to the nucleus, usually resulting in a change in transcriptional regulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02318":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ER-nucleus signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER to nucleus signaling pathway","type":"exact"},{"name":"ER to nucleus signalling pathway","type":"exact"},{"name":"ER-nuclear signaling pathway","type":"exact"},{"name":"ER-nuclear signalling pathway","type":"exact"},{"name":"endoplasmic reticulum to nucleus signaling pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear signaling pathway","type":"exact"}],"termid":"GO:0006984","terms_by_termid":{"GO:0006984":null,"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0084752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix cochaperone; nucleotide release factor for Ssc1p in protein translocation and folding; also acts as cochaperone for Ssq1p in folding of Fe-S cluster proteins; acts as oxidative sensor to regulate mitochondrial Ssc1p; in presence of oxidative stress, dimeric Mge1p becomes a monomer and unable to regulate Ssc1p function; homolog of E. coli GrpE and human Mge1 (GRPEL1), which also responds to oxidative stress","termid":"PBO:0084752"}


id: GO:0080081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in 4-methylumbelliferyl-beta-D-glucopyranoside.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity","termid":"GO:0080081"}


id: PBO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Bet5 (predicted)","termid":"PBO:0001904"}


id: MOD:02018
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an arachidonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"arachidonoylated residue","termid":"MOD:02018"}


id: PBO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 2","termid":"PBO:0046468"}


id: GO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an Purkinje myocyte to a ventricular cardiac muscle cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"Purkinje myocyte-ventricular cardiac muscle cell adhesion involved in cell communication","termid":"GO:0086074"}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: PBO:0053974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1285","termid":"PBO:0053974"}


id: PBO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 4","termid":"PBO:0061898"}


id: GO:0046941
data:
  {"annotated_genes":["SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88327],"is_not":false,"summary":null,"term":"GO:0046941"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.","definition_xrefs":["PMID:12761200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"azetidine-2-carboxylic acid acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046941","terms_by_termid":{"GO:0046941":null}}


id: PBO:0068618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 70, pseudogene","termid":"PBO:0068618"}


id: PBO:0068790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 27, pseudogene","termid":"PBO:0068790"}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["EC:2.4.2.12","MetaCyc:2.4.2.12-RXN","KEGG_REACTION:R01271","Reactome:R-HSA-197250"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: GO:0070665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"positively_regulates","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte proliferation","synonyms":[{"name":"activation of leukocyte proliferation","type":"narrow"},{"name":"stimulation of leukocyte proliferation","type":"narrow"},{"name":"up regulation of leukocyte proliferation","type":"exact"},{"name":"up-regulation of leukocyte proliferation","type":"exact"},{"name":"upregulation of leukocyte proliferation","type":"exact"}],"termid":"GO:0070665"}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: PBO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 3","termid":"PBO:0043724"}


id: PBO:0085979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein abundance increases in response to DNA replication stress","termid":"PBO:0085979"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: GO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + ADP = phosphate + ADP-aldose.","definition_xrefs":["MetaCyc:2.7.7.36-RXN","EC:2.7.7.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"aldose-1-phosphate adenylyltransferase activity","synonyms":[{"name":"ADP sugar phosphorylase activity","type":"related"},{"name":"ADP-aldose phosphorylase activity","type":"related"},{"name":"ADP-sugar phosphorylase activity","type":"broad"},{"name":"ADP:aldose-1-phosphate adenylyltransferase activity","type":"exact"},{"name":"ADP:alpha-D-aldose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ADPaldose phosphorylase activity","type":"related"},{"name":"adenosine diphosphate glucose:orthophosphate adenylyltransferase activity","type":"related"},{"name":"adenosine diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar-1-phosphate adenylyltransferase activity","type":"broad"}],"termid":"GO:0047346"}


id: PBO:0059742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 16","termid":"PBO:0059742"}


id: PBO:0086672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-3; YLR156C-A has a paralog, YLR159C-A, that arose from a segmental duplication","termid":"PBO:0086672"}


id: PATO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's molecules being are aerially dispersed and perceived by an odorant receptor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odor","termid":"PATO:0000058"}


id: PBO:0091271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L49","termid":"PBO:0091271"}


id: PBO:0035853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_metaphase_chromosome_recapture","termid":"PBO:0035853"}


id: FYPO:0001858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal fatty acid synthase activity","termid":"FYPO:0000720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased fatty acid synthase activity","synonyms":[{"name":"increased FAS activity","type":"exact"}],"termid":"FYPO:0001858"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_02618","SJAG_00957","SJAG_03298","SJAG_04693","SJAG_01359","SJAG_01500","SJAG_03946","SJAG_01582","SJAG_01566","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86555,95028,86129,109029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[95751,113295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[84474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[87411,92090,93126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted)","termid":"PBO:0000090"}


id: PBO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein (predicted)","termid":"PBO:0012053"}


id: PBO:0056818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 11","termid":"PBO:0056818"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: PBO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane insertion protein Get4 (predicted)","termid":"PBO:0005203"}


id: PBO:0029066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_riboflavin_binding","termid":"PBO:0029066"}


id: PBO:0087607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cohesin complex; which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms; relocalizes to the cytosol in response to hypoxia; essential for viability","termid":"PBO:0087607"}


id: GO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"in utero embryonic development","termid":"GO:0001701"}


id: PBO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like protein","termid":"PBO:0005146"}


id: GO:0003104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glomerular filtration. Glomerular filtration is the processs whereby blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular filtration","termid":"GO:0003093"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular filtration","termid":"GO:0003104"}


id: PBO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive orphan 1","termid":"PBO:0004803"}


id: PBO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_autophagy","termid":"PBO:0031814"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: GO:0008830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-L-mannose.","definition_xrefs":["EC:5.1.3.13","RHEA:16969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"dTDP-4-dehydrorhamnose 3,5-epimerase activity","secondary_identifiers":["MetaCyc:DTDPDEHYDRHAMEPIM-RXN","KEGG_REACTION:R06514"],"synonyms":[{"name":"TDP-4-keto-L-rhamnose-3,5-epimerase activity","type":"related"},{"name":"TDP-4-ketorhamnose 3,5-epimerase activity","type":"related"},{"name":"dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase activity","type":"related"},{"name":"dTDP-4-keto-6-deoxyglucose 3,5-epimerase activity","type":"related"},{"name":"thymidine diphospho-4-ketorhamnose 3,5-epimerase activity","type":"related"}],"termid":"GO:0008830"}


id: FYPO:0004856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,6-beta-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal endo-1,6-beta-glucosidase activity","synonyms":[{"name":"abnormal glucan endo-1,6-beta-glucosidase activity","type":"exact"}],"termid":"FYPO:0004856"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: PBO:0029588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_binding","termid":"PBO:0029588"}


id: SO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The coding exon that is most 3-prime on a given transcript.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon","synonyms":[{"name":"3' coding exon","type":"related"},{"name":"three prime coding exon","type":"exact"}],"termid":"SO:0000202"}


id: PBO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 33","termid":"PBO:0060086"}


id: PBO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with ring finger domain 1","termid":"PBO:0042933"}


id: PBO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin E1","termid":"PBO:0042197"}


id: GO:0035619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip portion of an outgrowth of a root epidermal cell.","definition_xrefs":["PMID:16567499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"root hair","termid":"GO:0035618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"root hair tip","synonyms":[{"name":"root hair cell tip","type":"exact"}],"termid":"GO:0035619"}


id: PBO:0041025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family C","termid":"PBO:0041025"}


id: PBO:0078406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 1-2","termid":"PBO:0078406"}


id: GO:0044295
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell axon.","definition_xrefs":["NIF_Subcellular:sao203987954","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"axon growth cone","type":"exact"}],"termid":"GO:0044295"}


id: PBO:0054884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2298","termid":"PBO:0054884"}


id: PBO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR94","termid":"PBO:0005328"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: PBO:0062483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 2 pseudogene","termid":"PBO:0062483"}


id: PBO:0050340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 42","termid":"PBO:0050340"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: GO:0046521
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85296,104666],"is_not":false,"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"sphingoid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid breakdown","type":"exact"},{"name":"sphingoid catabolism","type":"exact"},{"name":"sphingoid degradation","type":"exact"}],"termid":"GO:0046521","terms_by_termid":{"GO:0046521":null}}


id: GO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-2 (VEGFR-2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","PMID:12967471","Wikipedia:VEGF_receptors","GOC:uh","Wikipedia:Kinase_insert_domain_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-2 signaling pathway","synonyms":[{"name":"FLK-1 signaling pathway","type":"exact"},{"name":"KDR signaling pathway","type":"exact"},{"name":"VEGFR-2 signaling pathway","type":"exact"},{"name":"VEGFR2 signaling pathway","type":"exact"}],"termid":"GO:0036324"}


id: PBO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4","termid":"PBO:0046346"}


id: PBO:0056451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 3","termid":"PBO:0056451"}


id: PBO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR heme transporter 2","termid":"PBO:0047695"}


id: PBO:0051235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-40-1 (pseudogene)","termid":"PBO:0051235"}


id: PBO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 9","termid":"PBO:0072007"}


id: GO:0018824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (hydroxyamino)benzene = 2-aminophenol.","definition_xrefs":["EC:5.4.4.1","UM-BBD_reactionID:r0304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"(hydroxyamino)benzene mutase activity","secondary_identifiers":["MetaCyc:5.4.4.1-RXN","RHEA:19245"],"synonyms":[{"name":"(hydroxyamino)benzene hydroxymutase activity","type":"related"},{"name":"HAB mutase activity","type":"related"},{"name":"hydroxylaminobenzene hydroxymutase activity","type":"related"},{"name":"hydroxylaminobenzene mutase activity","type":"related"}],"termid":"GO:0018824"}


id: PBO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR2 antisense RNA 1","termid":"PBO:0047696"}


id: GO:0061412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of amino acids.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation (obsolete GO:0061412)","termid":"GO:0061412"}


id: PBO:0030451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine_and_methionine","termid":"PBO:0030451"}


id: PBO:0048867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A3","termid":"PBO:0048867"}


id: GO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcoplasm","secondary_identifiers":["Wikipedia:Sarcoplasm"],"termid":"GO:0016528"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: PBO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_vegetative_cell","termid":"PBO:0031407"}


id: GO:1902906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a proteasome storage granule.","definition_xrefs":["GOC:TermGenie","PMID:23690178","GO_REF:0000079","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"proteasome storage granule assembly","secondary_identifiers":["GO:1990237"],"synonyms":[{"name":"PSG assembly","type":"related"},{"name":"PSG formation","type":"related"},{"name":"proteasome storage granule formation","type":"exact"},{"name":"sequestration of proteasome core complex in proteasome storage granule","type":"narrow"}],"termid":"GO:1902906"}


id: FYPO:0004305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CTD phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000707","FYPO:0006551","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CTD phosphatase activity","termid":"FYPO:0004305"}


id: PBO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog, implicated in gene expression","termid":"PBO:0110062"}


id: GO:0102176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloeucalenone + NADPH + H+ = cycloeucalenol + NADP.","definition_xrefs":["GOC:pz","PMID:4387005"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloeucalenone reductase activity (obsolete GO:0102176)","termid":"GO:0102176"}


id: GO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endothelin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17376402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endothelin receptor signaling pathway involved in heart process","synonyms":[{"name":"endothelin receptor signalling pathway involved in heart process","type":"exact"}],"termid":"GO:0086101"}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["UniProtKB:Q9UTN4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: MOD:00815
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00151. Remap to MOD:00151.","definition_xrefs":["PubMed:9428520","PubMed:7878465","PubMed:14527393"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00815 molybdopterin (obsolete MOD:00815)","termid":"MOD:00815"}


id: MOD:01663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(ADP-ribosyl)-L-threonine.","definition_xrefs":["RESID:AA0519","PubMed:20185726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-butanoic acid","type":"exact"},{"name":"O-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-threonine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-threonine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01663"}


id: GO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell nuclear envelope","termid":"GO:0044199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear membrane","termid":"GO:0044200"}


id: PBO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1","termid":"PBO:0090018"}


id: GO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"production of molecular mediator of immune response","synonyms":[{"name":"production of cellular mediator of immune response","type":"related"}],"termid":"GO:0002440"}


id: PBO:0091810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for Stationary phase Viability","termid":"PBO:0091810"}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: PR:Q10237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.04c","synonyms":[{"name":"Spom972h-pcf11","type":"exact"}],"termid":"PR:Q10237"}


id: PBO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA synthetase Mse1 (predicted)","termid":"PBO:0001223"}


id: PBO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (predicted)","termid":"PBO:0001631"}


id: GO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"negatively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil chemotaxis","termid":"GO:0090024"}


id: GO:0071473
data:
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id: PBO:0091539
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id: GO:0020035
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id: PBO:0001987
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id: GO:0048625
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id: GO:0045637
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id: GO:0042886
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id: PBO:0064327
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id: PBO:0055107
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id: PBO:0062763
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id: GO:0046034
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id: PBO:0090501
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id: SO:0000381
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id: PBO:0089663
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id: GO:0050793
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id: GO:0016997
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id: GO:0051017
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id: PBO:0028879
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id: FYPO:0005072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin","synonyms":[{"name":"normal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005072"}


id: GO:1903895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900102"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"negatively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"down regulation of IRE1 branch of UPR","type":"exact"},{"name":"down regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"down-regulation of IRE1 branch of UPR","type":"exact"},{"name":"down-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"downregulation of IRE1 branch of UPR","type":"exact"},{"name":"downregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"downregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"downregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"downregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"downregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"downregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"downregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"inhibition of IRE1 branch of UPR","type":"narrow"},{"name":"inhibition of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"inhibition of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1alpha unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1p unfolded protein response","type":"narrow"},{"name":"inhibition of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"inhibition of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"inhibition of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"negative regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"negative regulation of IRE1 branch of UPR","type":"exact"},{"name":"negative regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"negative regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"negative regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"negative regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"negative regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"negative regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903895"}


id: PBO:0045847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 37","termid":"PBO:0045847"}


id: PBO:0058523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6068","termid":"PBO:0058523"}


id: PBO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by glucose","termid":"PBO:0005011"}


id: PATO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased size","synonyms":[{"name":"hypoplasia","type":"narrow"},{"name":"reduced","type":"related"},{"name":"small","type":"related"},{"name":"tiny","type":"related"},{"name":"underdeveloped","type":"narrow"}],"termid":"PATO:0000587"}


id: GO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-bisphospho-D-glycerate + H2O = 3-phospho-D-glycerate + phosphate.","definition_xrefs":["PMID:8567632","PMID:9452443"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate 2-phosphatase activity (obsolete GO:0004083)","termid":"GO:0004083"}


id: PBO:0070479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 14","termid":"PBO:0070479"}


id: PBO:0069202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 456, pseudogene","termid":"PBO:0069202"}


id: PBO:0026663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026663"}


id: GO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"positively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular extravasation","synonyms":[{"name":"activation of cellular extravasation","type":"narrow"},{"name":"stimulation of cellular extravasation","type":"narrow"},{"name":"up regulation of cellular extravasation","type":"exact"},{"name":"up-regulation of cellular extravasation","type":"exact"},{"name":"upregulation of cellular extravasation","type":"exact"}],"termid":"GO:0002693"}


id: PBO:0013440
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses sty1delta sensitivity to UV","termid":"PBO:0013440"}


id: PBO:0079026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 9-1","termid":"PBO:0079026"}


id: PBO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2434","termid":"PBO:0055019"}


id: PBO:0017570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase (predicted)","termid":"PBO:0017570"}


id: PATO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A weight which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"weight","termid":"PATO:0000128"},{"relation_name":"is_a","term_name":"decreased force","termid":"PATO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased weight","synonyms":[{"name":"light weight","type":"exact"},{"name":"low weight","type":"exact"}],"termid":"PATO:0000583"}


id: PBO:0073774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 8","termid":"PBO:0073774"}


id: GO:0014047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamate by a cell. The glutamate is the most abundant excitatory neurotransmitter in the nervous system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glutamate secretion","termid":"GO:0014047"}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_01916","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84247],"is_not":false,"summary":null,"term":"GO:0003720"},{"annotations":[103778,103779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["PMID:28732250","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01916":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164617","Reactome:R-HSA-163090"],"termid":"GO:0003720","terms_by_termid":{"GO:0003720":null,"GO:0003721":null}}


id: GO:0150105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained, in a location within a cell-cell junction.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26706435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell-cell junction","termid":"GO:0150105"}


id: PBO:0027732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_DNA_replication_initiation","termid":"PBO:0027732"}


id: PBO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 6","termid":"PBO:0050096"}


id: PBO:0079444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 2","termid":"PBO:0079444"}


id: PBO:0068052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 357","termid":"PBO:0068052"}


id: PBO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_colony_morphology","termid":"PBO:0030294"}


id: PBO:0111298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp40","termid":"PBO:0111298"}


id: GO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:20005821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of astrocyte differentiation","termid":"GO:0048710"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte activation","termid":"GO:0061888"}


id: PBO:0085104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein that negatively regulates pseudohyphal differentiation; plays a regulatory role in the cyclic AMP (cAMP)-dependent protein kinase (PKA) signal transduction pathway; relocalizes to the cytosol in response to hypoxia; SOK2 has a paralog, PHD1, that arose from the whole genome duplication","termid":"PBO:0085104"}


id: PBO:0058236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4524b","termid":"PBO:0058236"}


id: GO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The orientation of free radical substrates in such a way that only a particular stereoisomer is synthesized by an enzyme. Best characterized as a function during lignan biosynthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"guiding stereospecific synthesis activity","synonyms":[{"name":"dirigent protein","type":"narrow"}],"termid":"GO:0042349"}


id: PBO:0029077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_vegetative_growth","termid":"PBO:0029077"}


id: PBO:0111774
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXS family protein","termid":"PBO:0111774"}


id: PR:Q10336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.06c","synonyms":[{"name":"Spom972h-mcp6","type":"exact"},{"name":"horsetail movement protein hrs1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 3 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10336"}


id: GO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the autophagosome double-membrane.","definition_xrefs":["GOC:rph","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"autophagosome lumen","synonyms":[{"name":"autophagic vacuole lumen","type":"exact"}],"termid":"GO:0034423"}


id: GO:1902203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["PMID:18819921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor receptor signaling pathway","termid":"GO:1902202"},{"relation_name":"negatively_regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of HGF receptor signaling pathway","type":"exact"},{"name":"down regulation of HGF receptor signalling pathway","type":"exact"},{"name":"down regulation of Met signaling pathway","type":"narrow"},{"name":"down regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of HGF receptor signaling pathway","type":"exact"},{"name":"down-regulation of HGF receptor signalling pathway","type":"exact"},{"name":"down-regulation of Met signaling pathway","type":"narrow"},{"name":"down-regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of HGF receptor signaling pathway","type":"exact"},{"name":"downregulation of HGF receptor signalling pathway","type":"exact"},{"name":"downregulation of Met signaling pathway","type":"narrow"},{"name":"downregulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of HGF receptor signaling pathway","type":"exact"},{"name":"inhibition of HGF receptor signalling pathway","type":"exact"},{"name":"inhibition of Met signaling pathway","type":"narrow"},{"name":"inhibition of hepatocyte growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of HGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of HGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of Met signaling pathway","type":"narrow"}],"termid":"GO:1902203"}


id: GO:0090429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"},{"relation_name":"is_a","term_name":"detection of endogenous stimulus","termid":"GO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of endogenous biotic stimulus","termid":"GO:0090429"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: PBO:0011084
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, Mg2+ Km 3.0 mM","termid":"PBO:0011084"}


id: PBO:0040734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR activator of RhoGEF and GTPase","termid":"PBO:0040734"}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: PBO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes only","termid":"PBO:0011071"}


id: GO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a pseudouridine synthetase by using base complementarity to guide site-specific pseudouridylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA pseudouridylation guide activity","termid":"GO:0030565"}


id: GO:0033177
data:
  {"annotated_genes":["SJAG_02105","SJAG_00836","SJAG_03406","SJAG_MIT09","SJAG_05294","SJAG_03925","SJAG_MIT37","SJAG_07003","SJAG_01913","SJAG_00985","SJAG_00133","SJAG_02023","SJAG_00516","SJAG_05204","SJAG_04122","SJAG_00542","SJAG_02782","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115048,88843,115053,115057,99446,90440,89450,103737,97537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000276"},{"annotations":[111837,99417,103641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"},{"annotations":[85308,95622,85632,91276,99679,87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00985":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05294":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, proton-transporting domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033177","terms_by_termid":{"GO:0000220":null,"GO:0000274":null,"GO:0000276":null}}


id: GO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mandelamide + H2O = (R)-mandelate + NH4.","definition_xrefs":["EC:3.5.1.86","RHEA:22876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mandelamide amidase activity","secondary_identifiers":["MetaCyc:3.5.1.86-RXN","KEGG_REACTION:R05783"],"synonyms":[{"name":"Pseudomonas mandelamide hydrolase activity","type":"related"},{"name":"mandelamide hydrolase activity","type":"related"}],"termid":"GO:0050537"}


id: FYPO:0005456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a lower than normal number of cells contain 1C DNA content.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of cells with 1C DNA content","synonyms":[{"name":"decreased amount of cells with 1C DNA content","type":"exact"},{"name":"decreased number of cells containing 1C DNA","type":"exact"},{"name":"reduced number of cells with 1C DNA content","type":"exact"}],"termid":"FYPO:0005456"}


id: GO:1904213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"},{"relation_name":"is_a","term_name":"negative regulation of iodide transport","termid":"GO:1904202"},{"relation_name":"is_a","term_name":"regulation of iodide transmembrane transport","termid":"GO:1904212"},{"relation_name":"negatively_regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iodide transmembrane transport","synonyms":[{"name":"down regulation of iodide transmembrane transport","type":"exact"},{"name":"down-regulation of iodide transmembrane transport","type":"exact"},{"name":"downregulation of iodide transmembrane transport","type":"exact"},{"name":"inhibition of iodide transmembrane transport","type":"narrow"}],"termid":"GO:1904213"}


id: GO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host (obsolete GO:0052144)","synonyms":[{"name":"negative energy taxis within host","type":"exact"}],"termid":"GO:0052144"}


id: FYPO:0004057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is increased. Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:19436749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased intragenic meiotic recombination","synonyms":[{"name":"increased meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0004057"}


id: GO:0051798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hair follicle development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hair follicle development","termid":"GO:0051797"},{"relation_name":"positively_regulates","term_name":"hair follicle development","termid":"GO:0001942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle development","synonyms":[{"name":"activation of hair follicle development","type":"narrow"},{"name":"stimulation of hair follicle development","type":"narrow"},{"name":"up regulation of hair follicle development","type":"exact"},{"name":"up-regulation of hair follicle development","type":"exact"},{"name":"upregulation of hair follicle development","type":"exact"}],"termid":"GO:0051798"}


id: GO:0102178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-formyl-ergosta-7,24(241)-dien-3beta-ol + O2 + NADH = 4alpha-carboxy-ergosta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4alpha-formyl-ergosta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["RHEA:58880","MetaCyc:RXN-11932"],"termid":"GO:0102178"}


id: PBO:0055532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2967","termid":"PBO:0055532"}


id: GO:1902256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["PMID:16839542","GOC:dph","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1902256"}


id: PBO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YMR038C","termid":"PBO:0002808"}


id: RO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"positively_regulates","termid":"RO:0002213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_activates","termid":"RO:0002407"}


id: GO:0030221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires specialized features of a basophil cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil differentiation","synonyms":[{"name":"basophil cell differentiation","type":"exact"}],"termid":"GO:0030221"}


id: PBO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 24, pseudogene","termid":"PBO:0070067"}


id: GO:0098753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes with covalently attached hydrophobic anchors products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of the cytoplasmic side of the plasma membrane (obsolete GO:0098753)","termid":"GO:0098753"}


id: PBO:0058218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-2","termid":"PBO:0058218"}


id: FYPO:0001298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased palmitoyl-CoA ligase activity","synonyms":[{"name":"decreased palmitoyl-CoA synthetase activity","type":"exact"},{"name":"reduced palmitoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001298"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: FYPO:0000419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of cytokinesis","synonyms":[{"name":"cytokinesis: decreased rate","type":"related"},{"name":"decreased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinesis","type":"exact"},{"name":"reduced rate of cytokinesis","type":"exact"}],"termid":"FYPO:0000419"}


id: PBO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1","termid":"PBO:0002142"}


id: PBO:0083649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-beta-1,3-glucanase; major protein of the cell wall, involved in cell wall maintenance; involved in incorporation of newly synthesized mannoprotein molecules into the cell wall","termid":"PBO:0083649"}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_01957","SJAG_04041","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85508,86660,99747],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["EC:2.3.1.51","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8849345","Reactome:R-HSA-75885","RHEA:19709","Reactome:R-HSA-1482548","Reactome:R-HSA-1482547","Reactome:R-HSA-1482636","MetaCyc:RXN-1623","GO:0004469","Reactome:R-HSA-1482539","Reactome:R-HSA-1482598","Reactome:R-HSA-1482667","Reactome:R-HSA-1482689","Reactome:R-HSA-1482894"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: PR:O43005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.06c","synonyms":[{"name":"Spom972h-apl1","type":"exact"},{"name":"beta-2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 beta large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43005"}


id: FYPO:0000487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: GO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-serine residue by the formation of O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["RESID:AA0246"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-serine (obsolete GO:0018145)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-serine","type":"exact"}],"termid":"GO:0018145"}


id: GO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor metabolic process (obsolete GO:0042079)","synonyms":[{"name":"GPI/GSI anchor metabolic process","type":"exact"}],"termid":"GO:0042079"}


id: PBO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012303"}


id: GO:1900283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellobiose catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of cellobiose catabolic process","termid":"GO:1900282"},{"relation_name":"is_a","term_name":"negative regulation of cellobiose metabolic process","termid":"GO:2000931"},{"relation_name":"negatively_regulates","term_name":"cellobiose catabolic process","termid":"GO:2000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellobiose catabolic process","synonyms":[{"name":"down regulation of cellobiose catabolic process","type":"exact"},{"name":"down regulation of cellobiose catabolism","type":"exact"},{"name":"down-regulation of cellobiose catabolic process","type":"exact"},{"name":"down-regulation of cellobiose catabolism","type":"exact"},{"name":"downregulation of cellobiose catabolic process","type":"exact"},{"name":"downregulation of cellobiose catabolism","type":"exact"},{"name":"inhibition of cellobiose catabolic process","type":"narrow"},{"name":"inhibition of cellobiose catabolism","type":"narrow"},{"name":"negative regulation of cellobiose catabolism","type":"exact"}],"termid":"GO:1900283"}


id: SO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short 3'-uridylated RNA that can form a duplex (except for its post-transcriptionally added oligo_U tail (SO:0000609)) with a stretch of mature edited mRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Guide_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:guide_RNA","type":"exact"},{"name":"gRNA","type":"exact"},{"name":"guide RNA","type":"exact"}],"termid":"SO:0000602"}


id: GO:0103058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-L-rhamnose = kaempferol-3-glucoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kaempferol 3-glucoside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN1F-443"],"termid":"GO:0103058"}


id: PBO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC1 antisense RNA 1","termid":"PBO:0046262"}


id: PBO:0077345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86B","termid":"PBO:0077345"}


id: FYPO:0007734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is increased.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","synonyms":[{"name":"increased condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes","type":"narrow"},{"name":"increased protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin downstream of RNA polymerase III-transcribed genes","type":"exact"}],"termid":"FYPO:0007734"}


id: PBO:0064520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit A","termid":"PBO:0064520"}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: PBO:0086866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication","termid":"PBO:0086866"}


id: GO:0006601
data:
  {"annotated_genes":["SJAG_02271"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90593],"is_not":false,"summary":null,"term":"GO:0006601"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of creatine, N-[amino(imino)methyl]-N-methylglycine. Creatine is formed by a process beginning with amidino group transfer from L-arginine to glycine to form guanidinoacetate, followed by methyl group transfer from S-adenosyl-L-methionine to guanidinoacetate; it is then is phosphorylated to form a pool that stores high energy phosphate for the replenishment of ATP during periods of high, or fluctuating energy demand. In animals, most creatine is transported to and used in muscle.","definition_xrefs":["MetaCyc:PWY-6158","GOC:mah","MetaCyc:GLYCGREAT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine metabolic process","termid":"GO:0006600"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"creatine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"creatine anabolism","type":"exact"},{"name":"creatine biosynthesis","type":"exact"},{"name":"creatine formation","type":"exact"},{"name":"creatine synthesis","type":"exact"}],"termid":"GO:0006601","terms_by_termid":{"GO:0006601":null}}


id: GO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androsta-1,4-diene-3,17-dione + NADH + H+ + O2 = 9alpha-hydroxyandrosta-1,4-diene-3,17-dione + NAD+ + H2O.","definition_xrefs":["EC:1.14.15.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-ketosteroid 9-alpha-monooxygenase activity","secondary_identifiers":["RHEA:32199","KEGG_REACTION:R09860"],"synonyms":[{"name":"3-ketosteroid 9alpha-hydroxylase activity","type":"related"},{"name":"KshAB activity","type":"related"}],"termid":"GO:0036200"}


id: GO:0038186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity regulated by binding to a bile acid that modulates the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:bf","PMID:12016314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor activity","termid":"GO:0004879"},{"relation_name":"is_a","term_name":"bile acid receptor activity","termid":"GO:0038181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0140110","GO:0003700","GO:0003674"],"is_obsolete":false,"name":"bile acid nuclear receptor activity","synonyms":[{"name":"farnesoid X nuclear receptor activity","type":"related"},{"name":"farnesoid X receptor activity","type":"related"},{"name":"lithocholic acid receptor activity","type":"related"}],"termid":"GO:0038186"}


id: FYPO:0008106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"increased cell size during stationary phase","termid":"FYPO:0008106"}


id: PBO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 77","termid":"PBO:0042020"}


id: GO:0045899
data:
  {"annotated_genes":["SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111166],"is_not":false,"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase II transcription preinitiation complex assembly","termid":"GO:0045898"},{"relation_name":"is_a","term_name":"positive regulation of transcription initiation by RNA polymerase II","termid":"GO:0060261"},{"relation_name":"positively_regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0044085","GO:0006351","GO:0008150","GO:0006355","GO:0010467","GO:0065003"],"is_obsolete":false,"name":"positive regulation of RNA polymerase II transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"positive regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"positive regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"exact"},{"name":"stimulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"up regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"up-regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"upregulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"}],"termid":"GO:0045899","terms_by_termid":{"GO:0045899":null}}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_02990","SJAG_01486","SJAG_04142","SJAG_03941","SJAG_02460","SJAG_00727","SJAG_01644","SJAG_04190","SJAG_00399","SJAG_01708","SJAG_01832","SJAG_01419","SJAG_03855","SJAG_02521","SJAG_02169","SJAG_02575","SJAG_04791","SJAG_05373","SJAG_01533","SJAG_01429","SJAG_02771","SJAG_03026","SJAG_02200","SJAG_02828","SJAG_05196","SJAG_01698","SJAG_03615","SJAG_05232","SJAG_02072","SJAG_05012","SJAG_01680","SJAG_00757","SJAG_01205","SJAG_05239","SJAG_03923","SJAG_02294","SJAG_03454","SJAG_01605","SJAG_03906","SJAG_03898","SJAG_02098","SJAG_01648","SJAG_04183","SJAG_03780","SJAG_01410","SJAG_00640","SJAG_02616","SJAG_01076","SJAG_03722","SJAG_04816","SJAG_03680","SJAG_00250","SJAG_02545","SJAG_01677","SJAG_05295","SJAG_01849","SJAG_03728","SJAG_05372","SJAG_02708","SJAG_01573","SJAG_04239","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83985,84083,84621,84750,85052,85677,85760,86199,86352,86913,87016,88037,88187,89242,89524,91639,91798,92148,92322,92555,92762,92798,93076,93147,94645,94740,94874,96275,96304,96339,96767,98554,98634,98696,99078,99753,99826,99921,99992,100192,103490,103580,103625,105173,106693,107093,107390,107434,107615,108429,109959,110224,110249,111499,112251,112516,112806,113197,113290,113580,113713,114705],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["GOC:vw","GOC:mah","GOC:bf","PMID:20096808","PMID:21035408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02169":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: FYPO:0004119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is elongated, has more than one nucleus, has one or more septa with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multinucleate cell with abnormal septum formation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004119"}


id: PBO:0059483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase A","termid":"PBO:0059483"}


id: PBO:0081359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 185 with LIM domain","termid":"PBO:0081359"}


id: PBO:0064796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1N (putative)","termid":"PBO:0064796"}


id: GO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid = a D-amino acid.","definition_xrefs":["EC:5.1.1.10","MetaCyc:AMINO-ACID-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase activity, acting on amino acids and derivatives","termid":"GO:0036361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"amino-acid racemase activity","secondary_identifiers":["RHEA:18317"],"synonyms":[{"name":"L-amino acid racemase activity","type":"related"}],"termid":"GO:0047661"}


id: GO:0097643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with amylin to initiate a change in cell activity.","definition_xrefs":["PMID:10871296","GOC:bhm","PMID:12037140","PMID:18687416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"amylin receptor activity","termid":"GO:0097643"}


id: PBO:0040980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1","termid":"PBO:0040980"}


id: PBO:0069393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 653, pseudogene","termid":"PBO:0069393"}


id: PBO:0078302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-7","termid":"PBO:0078302"}


id: PBO:0069505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 772, pseudogene","termid":"PBO:0069505"}


id: GO:0008028
data:
  {"annotated_genes":["SJAG_04593","SJAG_01924","SJAG_01960","SJAG_02780","SJAG_02779","SJAG_00276","SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[87565,87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[88908,108164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[89982,110129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of monocarboxylic acids from one side of a membrane to the other. A monocarboxylic acid is an organic acid with one COOH group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01505":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monocarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429749","Reactome:R-HSA-433698","Reactome:R-HSA-5624211","GO:0008505","Reactome:R-HSA-9645220"],"synonyms":[{"name":"monocarboxylate carrier","type":"narrow"},{"name":"prostaglandin/thromboxane transporter activity","type":"narrow"}],"termid":"GO:0008028","terms_by_termid":{"GO:0015123":null,"GO:0015225":null,"GO:0050833":null,"GO:0089721":null,"GO:1901604":null}}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["GOC:nhn","PMID:21853533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: GO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin biosynthetic process","synonyms":[{"name":"down regulation of integrin biosynthetic process","type":"exact"},{"name":"down-regulation of integrin biosynthetic process","type":"exact"},{"name":"downregulation of integrin biosynthetic process","type":"exact"},{"name":"inhibition of integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of integrin anabolism","type":"exact"},{"name":"negative regulation of integrin biosynthesis","type":"exact"},{"name":"negative regulation of integrin formation","type":"exact"},{"name":"negative regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045720"}


id: GO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth of symbiont involved in interaction with host (obsolete GO:0044146)","synonyms":[{"name":"negative regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044146"}


id: MOD:00144
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:9535866","ChEBI:17627","Unimod:390#C","PubMed:170910","PubMed:192772","RESID:AA0135","DeltaMass:0","PubMed:2536325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme-L-cysteine","synonyms":[{"name":"(12-ethenyl-7-[(1S)-1-([(2R)-2-amino-2-carboxyethyl]sulfanyl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis[2-carboxyethyl]-N21,N22,N23,N24)-ferrate","type":"exact"},{"name":"4-[1-(S-cysteinyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Heme","type":"related"},{"name":"HemeCys1","type":"exact"},{"name":"S-Heme (on Cysteine)","type":"exact"},{"name":"cysteinyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"heme-L-cysteine","type":"exact"}],"termid":"MOD:00144"}


id: GO:0051430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin-releasing hormone receptor 1 (CRHR1). CRHR1 is the major subtype in the pituitary corticotroph, and mediates the stimulatory actions of corticotropin-releasing hormone on corticotropin hormone secretion. CRHR1 are also located in cortical areas of the brain, cerebellum and limbic system.","definition_xrefs":["PMID:15134857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticotropin-releasing hormone receptor binding","termid":"GO:0051429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"corticotropin-releasing hormone receptor 1 binding","secondary_identifiers":["GO:0031743"],"synonyms":[{"name":"CRHR1 binding","type":"exact"},{"name":"type 1 corticotropin releasing factor receptor binding","type":"exact"},{"name":"type 1 corticotropin releasing factor receptor ligand","type":"narrow"},{"name":"type 1 corticotropin-releasing factor receptor binding","type":"exact"}],"termid":"GO:0051430"}


id: PBO:0091144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mini protein, single membrane pass Min8, meiosis specific splicing in fission yeast","termid":"PBO:0091144"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: GO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an angiotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"angiotensin receptor binding","synonyms":[{"name":"angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031701"}


id: PBO:0074085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 2","termid":"PBO:0074085"}


id: PBO:0043322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein family member 4","termid":"PBO:0043322"}


id: PBO:0072958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCEL antisense RNA 1","termid":"PBO:0072958"}


id: PBO:0054521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1921","termid":"PBO:0054521"}


id: PBO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 50","termid":"PBO:0070820"}


id: GO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system development","termid":"GO:0002520"}


id: GO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units.","definition_xrefs":["GOC:mlg","EC:3.2.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"levanase activity","secondary_identifiers":["MetaCyc:3.2.1.65-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan fructanohydrolase activity","type":"related"},{"name":"levan hydrolase activity","type":"exact"}],"termid":"GO:0031219"}


id: PBO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR95","termid":"PBO:0017003"}


id: PBO:0050744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 6","termid":"PBO:0050744"}


id: GO:0102214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme A + ATP + an omega-hydroxy fatty acid = diphosphoric acid + AMP + a omega-hydroxyacyl-CoA.","definition_xrefs":["GOC:pz","EC:6.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"omega-hydroxy fatty acyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12185"],"termid":"GO:0102214"}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: PBO:0065260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 1","termid":"PBO:0065260"}


id: PBO:0076312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2 binding protein","termid":"PBO:0076312"}


id: GO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"glycosome","secondary_identifiers":["Wikipedia:Glycosome"],"termid":"GO:0020015"}


id: GO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to sorbitol","termid":"GO:0072708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sorbitol","synonyms":[{"name":"cellular response to glucitol","type":"exact"}],"termid":"GO:0072709"}


id: GO:0106062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exit from meiosis.","definition_xrefs":["PMID:11493649","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"positively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of exit from meiosis","termid":"GO:0106062"}


id: PBO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol 25-hydroxylase","termid":"PBO:0042934"}


id: GO:0035157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a fusion cell fate. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"fusion cell fate specification","termid":"GO:0035156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion cell fate specification","synonyms":[{"name":"down regulation of fusion cell fate specification","type":"exact"},{"name":"down-regulation of fusion cell fate specification","type":"exact"},{"name":"downregulation of fusion cell fate specification","type":"exact"},{"name":"inhibition of fusion cell fate specification","type":"narrow"}],"termid":"GO:0035157"}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: PBO:0066217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 13","termid":"PBO:0066217"}


id: PBO:0089193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2","termid":"PBO:0089193"}


id: PBO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 3","termid":"PBO:0040015"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: PBO:0064278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing J1","termid":"PBO:0064278"}


id: PBO:0003578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand siRNA ribonuclease Eri1","termid":"PBO:0003578"}


id: PATO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centered","termid":"PATO:0002268"}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: PBO:0044183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinosin, lysosomal cystine transporter","termid":"PBO:0044183"}


id: GO:0019962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I interferon. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:16681834","ISBN:0126896631","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon binding","termid":"GO:0019961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type I interferon binding","synonyms":[{"name":"interferon-alpha binding","type":"narrow"},{"name":"interferon-alpha/beta binding","type":"narrow"},{"name":"interferon-beta binding","type":"narrow"},{"name":"interferon-delta binding","type":"narrow"},{"name":"interferon-epsilon binding","type":"narrow"},{"name":"interferon-kappa binding","type":"narrow"},{"name":"interferon-omega binding","type":"narrow"},{"name":"interferon-tau binding","type":"narrow"},{"name":"interferon-zeta binding","type":"narrow"},{"name":"type I IFN binding","type":"exact"}],"termid":"GO:0019962"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: FYPO:0002995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of DNA replication","synonyms":[{"name":"normal regulation of DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication during vegetative growth","type":"exact"},{"name":"normal regulation of nuclear cell cycle DNA replication","type":"exact"}],"termid":"FYPO:0002995"}


id: GO:1903950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:TermGenie","PMID:25281747","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of AV node cell action potential","termid":"GO:0098904"},{"relation_name":"negatively_regulates","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of AV node cell action potential","synonyms":[{"name":"down regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of AV node cell action potential","type":"exact"},{"name":"down regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of AV node cell action potential","type":"exact"},{"name":"down-regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of AV node cell action potential","type":"exact"},{"name":"downregulation of atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of AV node cell action potential","type":"narrow"},{"name":"inhibition of atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903950"}


id: PBO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 2","termid":"PBO:0061241"}


id: GO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of alpha-beta T cell development","type":"related"},{"name":"negative regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046639"}


id: PBO:0041180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A2","termid":"PBO:0041180"}


id: PBO:0053520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 513","termid":"PBO:0053520"}


id: PBO:0059370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 3","termid":"PBO:0059370"}


id: GO:0100029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates histone modification.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by transcription from RNA polymerase II promoter (obsolete GO:0100029)","termid":"GO:0100029"}


id: GO:0018489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + vanillate = 3,4-dihydroxybenzoate + formaldehyde + H2O + NAD+.","definition_xrefs":["RHEA:13021","EC:1.14.13.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vanillate monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05274","MetaCyc:RXN-2","UM-BBD_reactionID:r0146","MetaCyc:RXN-10891"],"synonyms":[{"name":"4-hydroxy-3-methoxybenzoate demethylase activity","type":"related"},{"name":"vanillate demethylase (aerobic) activity","type":"exact"},{"name":"vanillate demethylase activity","type":"exact"},{"name":"vanillate:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0018489"}


id: GO:0140696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol.","definition_xrefs":["PMID:30498244","RHEA:58664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(S)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["EC:1.1.5.13"],"synonyms":[{"name":"L-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0140696"}


id: PBO:0027448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bleomycin","termid":"PBO:0027448"}


id: FYECO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cobalt chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CoCl2","synonyms":[{"name":"+ cobalt chloride","type":"exact"}],"termid":"FYECO:0000311"}


id: FYPO:0009100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol and galactose carbon sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on glycerol and galactose carbon source","synonyms":[{"name":"decreased vegetative cell growth on glycerol and galactose carbon source","type":"exact"}],"termid":"FYPO:0009100"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:tb","GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"activation of prostate induction by androgen receptor signaling pathway","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: PBO:0076052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short transmembrane mitochondrial protein 1","termid":"PBO:0076052"}


id: PBO:0091930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-proximal","termid":"PBO:0091930"}


id: PBO:0070580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 46","termid":"PBO:0070580"}


id: PBO:0066016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAMP2 antisense RNA 1","termid":"PBO:0066016"}


id: PBO:0064441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 2 pseudogene 1","termid":"PBO:0064441"}


id: GO:0061177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a glutamatergic neuron, containing the specialized apparatus necessary for the phasic release neurotransmitters that will induce the contraction of muscle. Type Is terminal boutons are smaller than type Ib terminal boutons.","definition_xrefs":["GOC:dph","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type Is terminal bouton","synonyms":[{"name":"type Is terminal button","type":"related"}],"termid":"GO:0061177"}


id: PBO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_organization","termid":"PBO:0031040"}


id: PBO:0062740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 7 pseudogene","termid":"PBO:0062740"}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: GO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurite development process that generates a long process of a neuron, as it invades a target tissue.","definition_xrefs":["GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis involved in innervation","termid":"GO:0060385"}


id: PBO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in nucleocytoplasmic transport Syo2 (predicted)","termid":"PBO:0018012"}


id: PATO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoelliptic","termid":"PATO:0002321"}


id: GO:0099169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099169)","termid":"GO:0099169"}


id: GO:1903012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone development.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:22510437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"positively_regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone development","synonyms":[{"name":"activation of bone development","type":"narrow"},{"name":"up regulation of bone development","type":"exact"},{"name":"up-regulation of bone development","type":"exact"},{"name":"upregulation of bone development","type":"exact"}],"termid":"GO:1903012"}


id: PBO:0042875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 141","termid":"PBO:0042875"}


id: PBO:0110240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome coplex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110240"}


id: GO:0061245
data:
  {"annotated_genes":["SJAG_00268","SJAG_01799","SJAG_04322","SJAG_04522","SJAG_00514","SJAG_03048","SJAG_02022","SJAG_04703","SJAG_00596","SJAG_00845","SJAG_00236","SJAG_00030","SJAG_00333","SJAG_01196","SJAG_02392","SJAG_00661","SJAG_03637","SJAG_03581","SJAG_04461","SJAG_01388"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85330,90172,91470,95327,95416,100422,103440,108209,110014,114634],"is_not":false,"summary":null,"term":"GO:0061245"},{"annotations":[100304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[99466,89325,101134,95863],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[89326,98115],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[108989,91286,101137,114778,100308,90177,95866,86620],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00236":null,"SJAG_00268":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01196":null,"SJAG_01388":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061245","terms_by_termid":{"GO:0061245":null,"GO:0061246":null,"GO:2000099":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0066214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 7","termid":"PBO:0066214"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: PBO:0064055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 89","termid":"PBO:0064055"}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: PBO:0074242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 2","termid":"PBO:0074242"}


id: PBO:0067877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 179","termid":"PBO:0067877"}


id: PBO:0028925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription","termid":"PBO:0028925"}


id: FYPO:0000466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased invasive growth (obsolete FYPO:0000466)","synonyms":[{"name":"invasive growth: decreased","type":"related"},{"name":"reduced invasive growth","type":"exact"}],"termid":"FYPO:0000466"}


id: GO:0080144
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090465"},{"annotations":[92253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090464"},{"annotations":[92254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090463"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of amino acids within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular amino acid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid homeostasis","type":"broad"},{"name":"cellular amino acid homeostasis","type":"exact"}],"termid":"GO:0080144","terms_by_termid":{"GO:0090463":null,"GO:0090464":null,"GO:0090465":null}}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: PBO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading/unloading factor (WAPL) Wpl1","termid":"PBO:0034751"}


id: PBO:0089581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5","termid":"PBO:0089581"}


id: GO:0120049
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90802],"is_not":false,"summary":null,"term":"GO:0120049"}]},"cv_name":"biological_process","definition":"The posttranscriptional N6-methylation of an adenine residue in an snRNA molecule.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA (adenine-N6)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120049","terms_by_termid":{"GO:0120049":null}}


id: GO:0033179
data:
  {"annotated_genes":["SJAG_02782","SJAG_00516","SJAG_01913","SJAG_05294","SJAG_03406","SJAG_02023"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85308,85632,87552,95622,99679,91276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033179","terms_by_termid":{"GO:0000220":null}}


id: FYPO:0006644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased, and some of the protein is present along the entire length of the spindle, during anaphase B of mitosis.","definition_xrefs":["PMID:28178520","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase B","termid":"FYPO:0004833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B of mitosis","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"}],"termid":"FYPO:0006644"}


id: PBO:0088976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup37","termid":"PBO:0088976"}


id: GO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIF class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIF-class transcription factor binding (obsolete GO:0001089)","synonyms":[{"name":"TFIIF-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001089"}


id: PBO:0089863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo1","termid":"PBO:0089863"}


id: PBO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2540","termid":"PBO:0055121"}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["PMID:21385875","PMID:14759368","GOC:vw","PMID:15260980"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: PBO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine/adenosine deaminase family (predicted)","termid":"PBO:0003041"}


id: PBO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328 pseudogene 1","termid":"PBO:0052323"}


id: PBO:0053913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1208","termid":"PBO:0053913"}


id: GO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the physical movement of a new cis-Golgi stack from the cis-position, nearest the endoplasmic reticulum (ER), to the trans position, farthest from the ER, successively becoming first a medial-Golgi cisterna and then a trans-Golgi cisterna.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"cisternal progression","synonyms":[{"name":"cisternal maturation","type":"exact"}],"termid":"GO:0045057"}


id: GO:0015125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bile acid from one side of a membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"bile acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5661198","Reactome:R-HSA-194130","Reactome:R-HSA-194079","Reactome:R-HSA-5661184","Reactome:R-HSA-9733964","Reactome:R-HSA-194083"],"termid":"GO:0015125"}


id: GO:1904362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["GOC:TermGenie","PMID:11278900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcitonin secretion","termid":"GO:1904362"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: PBO:0075134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U1 subunit 70","termid":"PBO:0075134"}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["CL:0000537","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: GO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"negatively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070759"}


id: GO:0008732
data:
  {"annotated_genes":["SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89788],"is_not":false,"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-allo-threonine = glycine + acetaldehyde.","definition_xrefs":["PMID:9228760","RHEA:26209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine aldolase activity","termid":"GO:0004793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-allo-threonine aldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.2.49","MetaCyc:LTAA-RXN"],"synonyms":[{"name":"L-allo-threonine acetaldehyde-lyase activity","type":"exact"},{"name":"LtaA","type":"related"}],"termid":"GO:0008732","terms_by_termid":{"GO:0008732":null}}


id: PBO:0027982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus","termid":"PBO:0027982"}


id: PBO:0090039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, implicated in vesicle-mediated transport","termid":"PBO:0090039"}


id: PBO:0068820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 58, pseudogene","termid":"PBO:0068820"}


id: GO:2000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"negatively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonucleoprotein complex localization","synonyms":[{"name":"negative regulation of RNP localization","type":"exact"},{"name":"negative regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000198"}


id: GO:0003876
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97536],"is_not":false,"summary":null,"term":"GO:0003876"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = IMP + NH3.","definition_xrefs":["EC:3.5.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"AMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-76590","RHEA:14777","MetaCyc:AMP-DEAMINASE-RXN"],"synonyms":[{"name":"5-AMP deaminase activity","type":"related"},{"name":"5-adenylate deaminase activity","type":"related"},{"name":"5-adenylic acid deaminase activity","type":"related"},{"name":"AMP aminase activity","type":"related"},{"name":"AMP aminohydrolase activity","type":"related"},{"name":"adenosine 5-monophosphate deaminase activity","type":"related"},{"name":"adenosine 5-phosphate aminohydrolase activity","type":"related"},{"name":"adenosine monophosphate deaminase activity","type":"related"},{"name":"adenyl deaminase activity","type":"related"},{"name":"adenylate aminohydrolase activity","type":"related"},{"name":"adenylate deaminase activity","type":"related"},{"name":"adenylate deaminase reaction","type":"exact"},{"name":"adenylate desaminase activity","type":"related"},{"name":"adenylic acid deaminase activity","type":"related"},{"name":"adenylic deaminase activity","type":"related"},{"name":"myoadenylate deaminase activity","type":"narrow"}],"termid":"GO:0003876","terms_by_termid":{"GO:0003876":null}}


id: PBO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 7","termid":"PBO:0044599"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: PBO:0084903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tryptophanyl-tRNA synthetase","termid":"PBO:0084903"}


id: GO:0061820
data:
  {"annotated_genes":["SJAG_01916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84240],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905839"}]},"cv_name":"biological_process","definition":"A telomere loop disassembly process that results in the disassembly of telomeric D-loops. A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["GOC:BHF","PMID:10338204","GOC:BHF_telomere","GOC:nc","PMID:24012755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomeric D-loop disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061820","terms_by_termid":{"GO:1905839":null}}


id: PBO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K2","termid":"PBO:0047805"}


id: PBO:0043178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIRBP antisense RNA 1","termid":"PBO:0043178"}


id: PBO:0003533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borealin homolog Nbl1","termid":"PBO:0003533"}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: GO:0046363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribitol metabolic process","termid":"GO:0019349"},{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribitol catabolic process","synonyms":[{"name":"ribitol breakdown","type":"exact"},{"name":"ribitol catabolism","type":"exact"},{"name":"ribitol degradation","type":"exact"}],"termid":"GO:0046363"}


id: PBO:0069630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 907, pseudogene","termid":"PBO:0069630"}


id: GO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + lanosterol = CoA + lanosterol ester.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lanosterol O-acyltransferase activity","termid":"GO:0034738"}


id: PBO:0026797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_regulatory_particle_binding","termid":"PBO:0026797"}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["RHEA:58157","PMID:30791207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1","MetaCyc:3.6.3.15-RXN","RHEA:58156"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: PBO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 4","termid":"PBO:0070469"}


id: PBO:0082746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; null mutants are osmosensitive; RSC30 has a paralog, RSC3, that arose from the whole genome duplication","termid":"PBO:0082746"}


id: PBO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 5","termid":"PBO:0048398"}


id: GO:0005882
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament","secondary_identifiers":["Wikipedia:Intermediate_filament","FMA:63851","NIF_Subcellular:sao952483289"],"synonyms":[{"name":"intermediate filament associated protein","type":"related"},{"name":"type I intermediate filament associated protein","type":"related"},{"name":"type II intermediate filament associated protein","type":"related"}],"termid":"GO:0005882"}


id: PBO:0076239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2","termid":"PBO:0076239"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pg","GO_REF:0000060","GOC:TermGenie","PMID:20151314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005","GO:0006810"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_02089","SJAG_02487","SJAG_03162","SJAG_02907","SJAG_01036","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85587,87388,89509,89623,107966,110768],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.","definition_xrefs":["EC:3.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null,"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"triglyceride lipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8848338","RHEA:12044","Reactome:R-HSA-5694109","Reactome:R-HSA-8848339","Reactome:R-HSA-163551","Reactome:R-HSA-1482777","MetaCyc:TRIACYLGLYCEROL-LIPASE-RXN"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"triacylglycerol lipase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: PBO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6","termid":"PBO:0090497"}


id: PBO:0003422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut3","termid":"PBO:0003422"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["RHEA:28258","MetaCyc:RXN-11756"],"termid":"GO:0102160"}


id: PBO:0062118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)","termid":"PBO:0062118"}


id: PBO:0049059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 65","termid":"PBO:0049059"}


id: PBO:0034090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paralogy_relationship_with","termid":"PBO:0034090"}


id: GO:0021607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve morphogenesis","synonyms":[{"name":"CN XI morphogenesis","type":"related"}],"termid":"GO:0021607"}


id: GO:0046467
data:
  {"annotated_genes":["SJAG_02903","SJAG_04107","SJAG_03509","SJAG_02168","SJAG_02429","SJAG_01300","SJAG_02706","SJAG_02885","SJAG_03801","SJAG_01860","SJAG_04881","SJAG_03015","SJAG_04337","SJAG_00176","SJAG_03018","SJAG_04550","SJAG_02590","SJAG_01219","SJAG_01857","SJAG_04119","SJAG_00068","SJAG_01057","SJAG_01227","SJAG_05327","SJAG_03953","SJAG_02305","SJAG_00831","SJAG_00506","SJAG_03076","SJAG_03066","SJAG_04165","SJAG_04178","SJAG_04913","SJAG_02085","SJAG_02776","SJAG_03506","SJAG_03878","SJAG_04924","SJAG_01356","SJAG_06425","SJAG_00295","SJAG_05219","SJAG_02804","SJAG_03672","SJAG_04975","SJAG_02056","SJAG_04878","SJAG_04986","SJAG_02523","SJAG_03690","SJAG_06383","SJAG_03292","SJAG_00846","SJAG_03115","SJAG_05311","SJAG_00880","SJAG_02842","SJAG_02913","SJAG_02488","SJAG_01416","SJAG_05278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96442,106779],"is_not":false,"summary":null,"term":"GO:0046467"},{"annotations":[82862,99474,87727,86882,109917],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[101320,104665,105579,105938,88344,87396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[89110,94339,107488,97324,86707,102533,98782,88644,92058,105794,90105,108264,110761,85012,112135,104430,113231,84378,88551,94552,95913,99538,111192,93768,103377,84105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[90868,91356,86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[97131,89132,90753,97887,101684,105488,93157,108453,103356,87293,95934,110762,87440,113512,94530,84965,105580,86075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030148"},{"annotations":[101321,101789,105581,88345,92544,93319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00176":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01227":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01416":null,"SJAG_01857":null,"SJAG_01860":null,"SJAG_02056":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03018":null,"SJAG_03066":null,"SJAG_03076":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03509":null,"SJAG_03672":null,"SJAG_03690":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04107":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04178":null,"SJAG_04337":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_04986":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"membrane lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid anabolism","type":"exact"},{"name":"membrane lipid biosynthesis","type":"exact"},{"name":"membrane lipid formation","type":"exact"},{"name":"membrane lipid synthesis","type":"exact"}],"termid":"GO:0046467","terms_by_termid":{"GO:0006506":null,"GO:0016255":null,"GO:0030148":null,"GO:0046467":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: GO:1904266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell chemotaxis.","definition_xrefs":["PMID:16203995","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"regulates","term_name":"Schwann cell chemotaxis","termid":"GO:1990751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell chemotaxis","termid":"GO:1904266"}


id: GO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.","definition_xrefs":["PMID:10601291","PMID:10401672","PMID:11822874","EC:1.6.3.1","RHEA:11260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NAD(P)H oxidase H2O2-forming activity","secondary_identifiers":["Reactome:R-HSA-9698758","Reactome:R-HSA-5693681"],"synonyms":[{"name":"NAD(P)H oxidase activity","type":"broad"},{"name":"NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"NADPH oxidase","type":"broad"},{"name":"THOX2 activity","type":"narrow"},{"name":"ThOX activity","type":"narrow"},{"name":"dual oxidase activity","type":"related"},{"name":"p138tox","type":"related"},{"name":"thyroid NADPH oxidase activity","type":"narrow"},{"name":"thyroid oxidase 2 activity","type":"narrow"},{"name":"thyroid oxidase activity","type":"narrow"}],"termid":"GO:0016174"}


id: PBO:0040275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atos homolog A","termid":"PBO:0040275"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: PBO:0045128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMXL1 divergent transcript","termid":"PBO:0045128"}


id: GO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mah","GOC:pr","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031659)","synonyms":[{"name":"G1/S-specific activation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific positive regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific stimulation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific up regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific up-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific upregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031659"}


id: GO:0038183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12016314","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bile acid signaling pathway","termid":"GO:0038183"}


id: GO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the progression of a growth plate cartilage chondrocyte over time.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in growth plate cartilage chondrocyte development (obsolete GO:0003434)","synonyms":[{"name":"BMP signalling pathway involved in growth plate cartilage chondrocyte development","type":"exact"}],"termid":"GO:0003434"}


id: PBO:0090007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor for histones, zf-GATA-type Ams2","termid":"PBO:0090007"}


id: GO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule that contributes to forming distinct miRNA isoforms from a mature miRNA.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004527","GO:0140098","GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing","synonyms":[{"name":"exonucleolytic trimming to generate 3' end of miRNA","type":"broad"}],"termid":"GO:0044748"}


id: GO:0010014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation, thereby effecting growth and development of a plant by giving rise to more meristem or specialized tissue.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem initiation","termid":"GO:0010014"}


id: PBO:0069117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 366, pseudogene","termid":"PBO:0069117"}


id: GO:0008123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADPH + H+ + O2 = 7-alpha-hydroxycholesterol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 7-alpha-monooxygenase activity","secondary_identifiers":["MetaCyc:CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN","Reactome:R-HSA-192051","RHEA:21812"],"synonyms":[{"name":"cholesterol 7-alpha-hydroxylase activity","type":"exact"},{"name":"cholesterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating)","type":"related"},{"name":"cytochrome P450 CYP7A1","type":"narrow"}],"termid":"GO:0008123"}


id: FYPO:0002280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division","synonyms":[{"name":"inviable following spore germination, single cell division","type":"exact"},{"name":"inviable germinated spore, single cell division","type":"exact"},{"name":"lethal after spore germination, single cell division","type":"exact"}],"termid":"FYPO:0002280"}


id: PBO:0051603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 26","termid":"PBO:0051603"}


id: GO:0098038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.","definition_xrefs":["GOC:bm","PMID:2553270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"non-replicative DNA transposition","synonyms":[{"name":"cut-and-paste transposition","type":"exact"},{"name":"non-replicative transposition, DNA-mediated","type":"exact"}],"termid":"GO:0098038"}


id: PBO:0039411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 1","termid":"PBO:0039411"}


id: FYPO:0005213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of translation in response to stress during vegetative growth","synonyms":[{"name":"normal regulation of translation in response to stress during mitotic cell cycle","type":"related"},{"name":"protein synthesis after stress, normal during vegetative growth","type":"related"}],"termid":"FYPO:0005213"}


id: FYPO:0001884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of Calcofluor White than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to Calcofluor White","synonyms":[{"name":"resistance to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"resistance to Calcofluor White during vegetative growth","type":"exact"},{"name":"resistant to Calcofluor White","type":"exact"}],"termid":"FYPO:0001884"}


id: SO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence of about 100 nucleotides of A added to the 3' end of most eukaryotic mRNAs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_sequence","synonyms":[{"name":"polyA sequence","type":"exact"}],"termid":"SO:0000610"}


id: GO:0030642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sulfate ions within a cell.","definition_xrefs":["PMID:24193406","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate ion homeostasis","termid":"GO:0055063"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular sulfate ion homeostasis","synonyms":[{"name":"cellular sulfate ion homeostasis","type":"exact"},{"name":"sulphate ion homeostasis","type":"broad"}],"termid":"GO:0030642"}


id: FYPO:0007202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:18794373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal rDNA spacer replication fork barrier binding","synonyms":[{"name":"normal DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007202"}


id: PBO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolar satellite-associated tubulin polyglutamylase complex regulator 1","termid":"PBO:0044081"}


id: PBO:0011524
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements a double-deletion of S. cerevisiae CYC1 and CYC7","termid":"PBO:0011524"}


id: FYPO:0002286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002286"}


id: PBO:0087975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region; inhibition of Tpi1p activity by PEP (phosphoenolpyruvate) stimulates redox metabolism in respiring cells; E104D mutation in human homolog TPI1 causes a rare autosomal disease; human TPI1 can complement yeast null mutant","termid":"PBO:0087975"}


id: GO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient modification of lysine by pyruvate to form N6-pyruvic acid 2-iminyl-L-lysine, found in the active site of dihydrodipicolinate synthase.","definition_xrefs":["PMID:1463470","RESID:AA0287"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018308)","synonyms":[{"name":"enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"}],"termid":"GO:0018308"}


id: PBO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during","termid":"PBO:0006170"}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: GO:0007417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["ISBN:0582227089","GOC:jid","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system development","secondary_identifiers":["Wikipedia:Neural_development"],"synonyms":[{"name":"CNS development","type":"exact"}],"termid":"GO:0007417"}


id: PBO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1 (predicted)","termid":"PBO:0004642"}


id: PBO:0045215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C8","termid":"PBO:0045215"}


id: GO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"serotonin metabolic process","termid":"GO:0042428"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"serotonin catabolic process","synonyms":[{"name":"serotonin breakdown","type":"exact"},{"name":"serotonin catabolism","type":"exact"},{"name":"serotonin degradation","type":"exact"}],"termid":"GO:0042429"}


id: PBO:0090845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex WD repeat protein Prp5","termid":"PBO:0090845"}


id: PR:Q9P6P7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rna15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C644.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.16","synonyms":[{"name":"Spom972h-rna15","type":"exact"}],"termid":"PR:Q9P6P7"}


id: GO:0102189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102189)","secondary_identifiers":["MetaCyc:RXN-11957"],"termid":"GO:0102189"}


id: GO:0010980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010979"},{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010980"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: GO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a potassium ion across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"leak channel activity","termid":"GO:0022840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium ion leak channel activity","termid":"GO:0022841"}


id: GO:0075276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telium development","termid":"GO:0075276"}


id: PBO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute binding protein 2","termid":"PBO:0001484"}


id: PBO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_valine_import","termid":"PBO:0030075"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: PBO:0077750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 membrane trafficking protein","termid":"PBO:0077750"}


id: PBO:0012586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin biosynthesis protein Tam41 (predicted)","termid":"PBO:0012586"}


id: PBO:0057272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 496","termid":"PBO:0057272"}


id: PBO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 3","termid":"PBO:0061484"}


id: PBO:0058959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKRN2 opposite strand","termid":"PBO:0058959"}


id: PBO:0067970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 272","termid":"PBO:0067970"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: PBO:0051925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 7","termid":"PBO:0051925"}


id: PBO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit","termid":"PBO:0032732"}


id: SO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as pyrrolysine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_pyrrolysine","termid":"SO:0000884"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"gene with stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000698"}


id: GO:0070173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of enamel mineralization","termid":"GO:0070173"}


id: PBO:0078911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 2-1","termid":"PBO:0078911"}


id: PBO:0059457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 1","termid":"PBO:0059457"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["UM-BBD_reactionID:r0913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-isopropylacetanilide amidohydrolase activity","termid":"GO:0034576"}


id: GO:0000064
data:
  {"annotated_genes":["SJAG_00626","SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93896,103747],"is_not":false,"summary":null,"term":"GO:0000064"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-ornithine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70634"],"synonyms":[{"name":"L-ornithine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"related"}],"termid":"GO:0000064","terms_by_termid":{"GO:0000064":null}}


id: PBO:0066924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 226","termid":"PBO:0066924"}


id: PBO:0076330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYS1 golgi trafficking protein","termid":"PBO:0076330"}


id: PBO:0041010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis, epicanthus inversus and ptosis candidate 1","termid":"PBO:0041010"}


id: GO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide secretion","synonyms":[{"name":"down regulation of antimicrobial peptide secretion","type":"exact"},{"name":"down-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"downregulation of antimicrobial peptide secretion","type":"exact"},{"name":"inhibition of antimicrobial peptide secretion","type":"narrow"}],"termid":"GO:0002795"}


id: FYPO:0001244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to thiamine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to thiamine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to thiamine starvation","type":"related"},{"name":"decreased RNA level during cellular response to thiamine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to thiamine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to vitamin B1 starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to thiamine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to thiamine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0001244"}


id: PBO:0086368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative amidase","termid":"PBO:0086368"}


id: GO:0050229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: medicarpin + NADP+ = vestitone + NADPH.","definition_xrefs":["EC:1.1.1.246","MetaCyc:PTEROCARPIN-SYNTHASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpin synthase activity (obsolete GO:0050229)","synonyms":[{"name":"medicarpin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"pterocarpan synthase activity","type":"related"}],"termid":"GO:0050229"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["PMID:25667419","GOC:TermGenie","GOC:hjd","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_04156","SJAG_02408","SJAG_03275","SJAG_01126","SJAG_02225","SJAG_00815","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85776,100562,100708,101885,104193,108325,109640],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0042559","GO:0006766"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid","MetaCyc:FOLSYN-PWY"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: PBO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4 (predicted)","termid":"PBO:0005143"}


id: GO:0035204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellocyte differentiation","synonyms":[{"name":"down regulation of lamellocyte differentiation","type":"exact"},{"name":"down-regulation of lamellocyte differentiation","type":"exact"},{"name":"downregulation of lamellocyte differentiation","type":"exact"},{"name":"inhibition of lamellocyte differentiation","type":"narrow"}],"termid":"GO:0035204"}


id: GO:0099161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic dense core granule exocytosis.","definition_xrefs":["PMID:17881523","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"regulates","term_name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of presynaptic dense core granule exocytosis","synonyms":[{"name":"regulation of presynaptic dense core vesicle exocytosis","type":"exact"}],"termid":"GO:0099161"}


id: PBO:0002825
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ntp1","termid":"PBO:0002825"}


id: PBO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 25","termid":"PBO:0070720"}


id: PBO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps17","termid":"PBO:0000555"}


id: GO:0102593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylanthranilate + UDP-alpha-D-glucose = N-methylanthraniloyl-beta-D-glucopyranose + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose: N-methylanthranilate glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15371"],"termid":"GO:0102593"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: PBO:0083573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF SEF1/YBL066C; YBL065W is a non-essential gene","termid":"PBO:0083573"}


id: FYPO:0001725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular aspartate level","synonyms":[{"name":"normal cellular L-aspartate level","type":"exact"},{"name":"normal cellular aspartate level during mitotic cell cycle","type":"related"},{"name":"normal cellular aspartate level during vegetative growth","type":"exact"},{"name":"normal cellular aspartic acid level","type":"related"},{"name":"normal level of aspartate in cell","type":"exact"}],"termid":"FYPO:0001725"}


id: PATO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific ph conditions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basophilic","termid":"PATO:0002094"}


id: PBO:0045011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog A","termid":"PBO:0045011"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: PATO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark cyan","termid":"PATO:0001248"}


id: PBO:0012011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0012011"}


id: PBO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 26","termid":"PBO:0052787"}


id: GO:0019409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.","definition_xrefs":["MetaCyc:AMMOXID-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"},{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"aerobic respiration, using ammonia as electron donor","synonyms":[{"name":"aerobic ammonia oxidation to nitrite via hydrazine","type":"exact"}],"termid":"GO:0019409"}


id: PBO:0068195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 502","termid":"PBO:0068195"}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: PBO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 1","termid":"PBO:0047632"}


id: PBO:0072774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A3, pseudogene","termid":"PBO:0072774"}


id: GO:0007236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk1 protein (obsolete GO:0007236)","synonyms":[{"name":"activation of Ssk1 protein","type":"exact"}],"termid":"GO:0007236"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: PBO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholestasis","termid":"PBO:0000725"}


id: GO:0120149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small host cell organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.","definition_xrefs":["PMID:9302272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell peroxisome","synonyms":[{"name":"host peroxisome","type":"exact"}],"termid":"GO:0120149"}


id: PBO:0081259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 29, pseudogene","termid":"PBO:0081259"}


id: PBO:0082222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in down-regulation of general amino acid transporter Gap1p upon shift to preferred nitrogen source; involved in lactate transporter Jen1p endocytosis; BUL1 has a paralog, BUL2, that arose from the whole genome duplication","termid":"PBO:0082222"}


id: PBO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc34","termid":"PBO:0001710"}


id: GO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin-like complex that is present in at least the plasma membrane of pre-B cells, and that is composed of two identical immunoglobulin heavy chains and two surrogate light chains, each composed of the lambda-5 and VpreB proteins, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:16464608","PMID:17306522","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-B cell receptor complex","synonyms":[{"name":"pre-BCR","type":"exact"}],"termid":"GO:0035369"}


id: GO:0048641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"}


id: PBO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no evidence for translation from proteomics, synteny, or ribosome profiling","termid":"PBO:0036446"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: PBO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific APC activator Slp1","termid":"PBO:0017556"}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: GO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition from the initiation to the elongation phases of transcription by a DNA-dependent RNA polymerase, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:18280161","GOC:txnOH","PMID:15020047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"promoter clearance during DNA-templated transcription","secondary_identifiers":["GO:0001122"],"synonyms":[{"name":"promoter clearance during DNA-dependent transcription","type":"exact"},{"name":"promoter clearance from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"promoter escape","type":"broad"}],"termid":"GO:0001109"}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: PBO:0040650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 binding component 3","termid":"PBO:0040650"}


id: PBO:0050865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2B (pseudogene)","termid":"PBO:0050865"}


id: MOD:00076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to symmetric dimethylarginine, N(omega),N'(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:2426402","PubMed:5128665","RESID:AA0067","PubMed:12964758","Unimod:36#R","PubMed:14570711","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"symmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[((methylamino)(methylimino)methyl)amino]pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"MOD_RES Symmetric dimethylarginine","type":"exact"},{"name":"N3,N4-dimethylarginine","type":"exact"},{"name":"N5-[(methylamino)(methylimino)methyl]ornithine","type":"exact"},{"name":"NG,N'G-dimethylarginine","type":"exact"},{"name":"NoNo'Me2Arg","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N'-dimethyl-L-arginine","type":"exact"},{"name":"omega-N,omega-N'-dimethylated L-arginine","type":"exact"},{"name":"symmetric dimethylarginine","type":"exact"}],"termid":"MOD:00076"}


id: PBO:0059178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C-type 1","termid":"PBO:0059178"}


id: PBO:0050591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1 pseudogene 2","termid":"PBO:0050591"}


id: PBO:0068846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 84, pseudogene","termid":"PBO:0068846"}


id: PBO:0063169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX interacting protein 1","termid":"PBO:0063169"}


id: GO:1904413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GOC:TermGenie","PMID:19590510","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle development","synonyms":[{"name":"down regulation of cardiac ventricle development","type":"exact"},{"name":"down-regulation of cardiac ventricle development","type":"exact"},{"name":"downregulation of cardiac ventricle development","type":"exact"},{"name":"inhibition of cardiac ventricle development","type":"narrow"}],"termid":"GO:1904413"}


id: RO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","definition_xrefs":["GOC:cjm","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"RO:0002432"}


id: GO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that starts with the activation of a Ssk2/Win1 family MAP3K, which activates a Pbs2/Wis1 family MAP2K, resulting in the activation of a Hog1/Sty1 family MAPK. Hog1 then translocates from the cytosol into the nucleus where it affects the expression of a large number of genes. This cascade is activated by hyperosmolarity or other abiotic stresses and results in cellular responses such as cell cycle arrest.","definition_xrefs":["PMID:32794416","PMID:9561267","PMID:17604854"],"gene_count":0,"genotype_count":0,"name":"obsolete osmosensory signaling MAPK cascade (obsolete GO:0000161)","synonyms":[{"name":"High Osmolarity Glycerol (HOG) MAPK pathway","type":"narrow"},{"name":"Hog1 MAPK pathway","type":"narrow"},{"name":"Hog1/Sty1 stress-activated MAPK cascade","type":"narrow"},{"name":"MAPK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade during osmolarity sensing","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signalling pathway","type":"exact"},{"name":"activation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of Pbs2 kinase","type":"narrow"},{"name":"inactivation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPKKK cascade","type":"exact"},{"name":"osmolarity sensing, activation of MAP kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAP kinase kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKKK activity","type":"narrow"},{"name":"termination of MAPK activity during osmolarity sensing","type":"narrow"}],"termid":"GO:0000161"}


id: PBO:0087253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits pheromone induced signalling downstream of MAPK, possibly at the level of the Ste12p transcription factor; mutant has increased aneuploidy tolerance; PRR2 has a paralog, NPR1, that arose from the whole genome duplication","termid":"PBO:0087253"}


id: GO:1905377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26261574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to D-galactose","synonyms":[{"name":"response to D-Gal","type":"exact"},{"name":"response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905377"}


id: PBO:0064403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 1","termid":"PBO:0064403"}


id: PBO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FH21 member 1","termid":"PBO:0046543"}


id: GO:0090489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the multi-step reaction: L-Tryptophan + 2 Oxygen + 2 NADPH + 2 H+ = Indole-3-acetaldehyde oxime + 3 H2O + 2 NADP+ + CO2. The individual reactions are: (1a) L-tryptophan + O2 + NADPH + H+ = N-hydroxy-L-tryptophan + NADP+ + H2O,(1b) N-hydroxy-L-tryptophan + O2 + NADPH + H+ = N,N-dihydroxy-L-tryptophan + NADP+ + H2O, and (1c) N,N-dihydroxy-L-tryptophan = (E)-indol-3-ylacetaldoxime + CO2 + H2O.","definition_xrefs":["EC:1.14.13.125","KEGG_REACTION:R08160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating, decarboxylating)","synonyms":[{"name":"tryptophan N-monooxygenase activity","type":"related"}],"termid":"GO:0090489"}


id: GO:0170014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of ANK1, RHCE, RHAG, SLC4A1, EPB42, GYPA, GYPB and AQP1, that functions in the stability and shape of the erythrocyte membrane in human.","definition_xrefs":["PMID:35835865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ankyrin-1 complex","synonyms":[{"name":"ankyrin complex","type":"exact"},{"name":"erythrocyte ankyrin-1 complex","type":"exact"}],"termid":"GO:0170014"}


id: GO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"nickel incorporation into nickel-iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0042075"}


id: PBO:0041413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 31","termid":"PBO:0041413"}


id: SO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/Mature_transcript"],"synonyms":[{"name":"mature transcript","type":"exact"}],"termid":"SO:0000233"}


id: GO:0034806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-11,12-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzo(a)pyrene 11,12-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034806"}


id: GO:0007487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia over time, from its formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is analia development in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"analia development","termid":"GO:0007487"}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: GO:0004789
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89882],"is_not":false,"summary":null,"term":"GO:0004789"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphoethyl)-thiazole + H+ = diphosphate + thiamine phosphate.","definition_xrefs":["EC:2.5.1.3","RHEA:22328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thiamine-phosphate diphosphorylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03223","MetaCyc:THI-P-SYN-RXN"],"synonyms":[{"name":"2-methyl-4-amino-5-hydroxymethylpyrimidine-diphosphate:4-methyl-5-(2-phosphoethyl)thiazole 2-methyl-4-aminopyrimidine-5-methenyltransferase activity","type":"related"},{"name":"TMP diphosphorylase activity","type":"related"},{"name":"TMP pyrophosphorylase activity","type":"related"},{"name":"TMP-PPase activity","type":"related"},{"name":"thiamin-phosphate diphosphorylase activity","type":"exact"},{"name":"thiamin-phosphate pyrophosphorylase activity","type":"exact"},{"name":"thiamine monophosphate pyrophosphorylase activity","type":"related"},{"name":"thiamine phosphate pyrophosphorylase activity","type":"related"},{"name":"thiamine-phosphate pyrophosphorylase activity","type":"exact"},{"name":"thiamine-phosphate synthase activity","type":"related"}],"termid":"GO:0004789","terms_by_termid":{"GO:0004789":null}}


id: FYPO:0001335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of DNA-dependent transcription in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype","termid":"FYPO:0000143"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"transcription regulation phenotype during vegetative growth","synonyms":[{"name":"fission yeast transcription regulation phenotype during vegetative growth","type":"exact"},{"name":"gene-specific transcription regulation phenotype during vegetative growth","type":"related"},{"name":"transcription regulation phenotype during mitotic cell cycle","type":"related"},{"name":"transcriptional control phenotype during vegetative growth","type":"broad"}],"termid":"FYPO:0001335"}


id: FYPO:0007487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which insertion of the newly formed spindle pole body into the nuclear envelope does not occur during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during meiosis II","synonyms":[{"name":"abolished new meiotic SPB insertion into nuclear envelope during meiosis II","type":"exact"},{"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during second meiotic nuclear division","type":"exact"},{"name":"abolished new spindle pole body insertion into nuclear envelope during meiosis II","type":"exact"}],"termid":"FYPO:0007487"}


id: _global:has_negative_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"_global:has_regulatory_component_activity"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"_global:negatively_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","secondary_identifiers":["RO:0002014"],"termid":"_global:has_negative_regulatory_component_activity"}


id: GO:0051117
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73171],"is_not":false,"summary":null,"term":"GO:0051117"}]},"cv_name":"molecular_function","definition":"Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ATPase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051117","terms_by_termid":{"GO:0051117":null}}


id: PBO:0041451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 53","termid":"PBO:0041451"}


id: PBO:0087335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl3p; co-translationally associates with nascent Rpl3p, preventing aggregation, and facilitating nuclear import; required for biogenesis of preribosomal particles; essential gene; contains five WD-repeat motifs","termid":"PBO:0087335"}


id: GO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of phosphatidylcholine-sterol O-acyltransferase.","definition_xrefs":["GOC:dph","GOC:tb","PMID:4335615","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activator activity","synonyms":[{"name":"LCAT activator activity","type":"narrow"}],"termid":"GO:0060228"}


id: MOD:01572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01572"}


id: PBO:0055630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3069","termid":"PBO:0055630"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: PBO:0053750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 987","termid":"PBO:0053750"}


id: GO:0015642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause lysis of bacterial cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriolytic toxin activity (obsolete GO:0015642)","synonyms":[{"name":"bacteriolytic toxin activity","type":"exact"}],"termid":"GO:0015642"}


id: PATO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convolute","termid":"PATO:0001966"}


id: GO:0098872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity occurring in the postsynaptic membrane, that is involved in regulating the cytosolic concentration of calcium ions in the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:0099583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098872"}


id: PBO:0059841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 1","termid":"PBO:0059841"}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: GO:0008841
data:
  {"annotated_genes":["SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88498],"is_not":false,"summary":null,"term":"GO:0008841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydropterate + L-glutamate = ADP + phosphate + dihydrofolate.","definition_xrefs":["EC:6.3.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"dihydrofolate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIHYDROFOLATESYNTH-RXN","RHEA:23584"],"synonyms":[{"name":"7,8-dihydrofolate synthetase activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP) activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP-forming)","type":"related"},{"name":"DHFS activity","type":"related"},{"name":"FHFS activity","type":"related"},{"name":"FHFS/FPGS activity","type":"related"},{"name":"H(2)-folate synthetase activity","type":"related"},{"name":"H2-folate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase-folylpolyglutamate synthetase activity","type":"related"},{"name":"dihydropteroate:L-glutamate ligase (ADP-forming) activity","type":"related"},{"name":"folylpoly-(gamma-glutamate) synthetase-dihydrofolate synthase activity","type":"related"}],"termid":"GO:0008841","terms_by_termid":{"GO:0008841":null}}


id: PBO:0079471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 2","termid":"PBO:0079471"}


id: GO:0009463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Diheme cytochrome b; cytochrome b has the hemes b(562) and b(566) and is a component of the mitochondrial respiratory chain complex III. Cytochrome b6 is a component of bc complex acting between photosystems II and I of photosynthesis.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b/b6 (obsolete GO:0009463)","synonyms":[{"name":"cytochrome b/b6","type":"exact"}],"termid":"GO:0009463"}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: GO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylation (obsolete GO:0016577)","termid":"GO:0016577"}


id: PBO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transmembrane transporter Liz1","termid":"PBO:0018038"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: GO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the phosphorus atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"P-methyltransferase activity","termid":"GO:0051994"}


id: PBO:0052678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 46","termid":"PBO:0052678"}


id: GO:0140409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA 3'-end processing","termid":"GO:0031442"},{"relation_name":"is_a","term_name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"},{"relation_name":"positively_regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA alternative polyadenylation","termid":"GO:0140409"}


id: PBO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 2","termid":"PBO:0044691"}


id: GO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta-adrenergic receptors; the activity involves transmitting the signal to the Gs alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"beta-adrenergic receptor activity","synonyms":[{"name":"beta adrenoceptor","type":"exact"}],"termid":"GO:0004939"}


id: PBO:0040214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 2","termid":"PBO:0040214"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: GO:0070237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation-induced cell death of T cells.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activation-induced cell death of T cells","termid":"GO:0070235"},{"relation_name":"positively_regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation-induced cell death of T cells","synonyms":[{"name":"activation of activation-induced cell death of T cells","type":"narrow"},{"name":"positive regulation of AICD","type":"broad"},{"name":"positive regulation of activated T cell apoptosis","type":"broad"},{"name":"positive regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"positive regulation of antigen-driven apoptosis","type":"broad"},{"name":"stimulation of activation-induced cell death of T cells","type":"narrow"},{"name":"up regulation of activation-induced cell death of T cells","type":"exact"},{"name":"up-regulation of activation-induced cell death of T cells","type":"exact"},{"name":"upregulation of activation-induced cell death of T cells","type":"exact"}],"termid":"GO:0070237"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: PBO:0064968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 22","termid":"PBO:0064968"}


id: SO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene suspected of being involved in the expression of a trait.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate_gene","synonyms":[{"name":"candidate gene","type":"exact"},{"name":"target gene","type":"exact"}],"termid":"SO:0001867"}


id: PBO:0076821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 4B","termid":"PBO:0076821"}


id: GO:1903024
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86208],"is_not":false,"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["GO_REF:0000058","PMID:11405625","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of ascospore formation","termid":"GO:0075296"},{"relation_name":"is_a","term_name":"regulation of ascospore-type prospore membrane formation","termid":"GO:1903023"},{"relation_name":"positively_regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0030437"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of FSM assembly","type":"narrow"},{"name":"activation of FSM biosynthesis","type":"narrow"},{"name":"activation of FSM formation","type":"narrow"},{"name":"activation of ascospore-type prospore membrane assembly","type":"narrow"},{"name":"activation of forespore membrane biosynthesis","type":"narrow"},{"name":"activation of forespore membrane formation","type":"narrow"},{"name":"positive regulation of FSM assembly","type":"exact"},{"name":"positive regulation of FSM biosynthesis","type":"exact"},{"name":"positive regulation of FSM formation","type":"exact"},{"name":"positive regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"positive regulation of forespore membrane biosynthesis","type":"exact"},{"name":"positive regulation of forespore membrane formation","type":"exact"},{"name":"up regulation of FSM assembly","type":"exact"},{"name":"up regulation of FSM biosynthesis","type":"exact"},{"name":"up regulation of FSM formation","type":"exact"},{"name":"up regulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"up regulation of forespore membrane biosynthesis","type":"exact"},{"name":"up regulation of forespore membrane formation","type":"exact"},{"name":"up-regulation of FSM assembly","type":"exact"},{"name":"up-regulation of FSM biosynthesis","type":"exact"},{"name":"up-regulation of FSM formation","type":"exact"},{"name":"up-regulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"up-regulation of forespore membrane biosynthesis","type":"exact"},{"name":"up-regulation of forespore membrane formation","type":"exact"},{"name":"upregulation of FSM assembly","type":"exact"},{"name":"upregulation of FSM biosynthesis","type":"exact"},{"name":"upregulation of FSM formation","type":"exact"},{"name":"upregulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"upregulation of forespore membrane biosynthesis","type":"exact"},{"name":"upregulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903024","terms_by_termid":{"GO:1903024":null}}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: GO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase III transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription factor activity (obsolete GO:0003709)","synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"exact"}],"termid":"GO:0003709"}


id: GO:0045150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoin, 3-hydroxy-2-butanone.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"acetoin metabolic process","termid":"GO:0045149"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"acetoin catabolic process","synonyms":[{"name":"acetoin breakdown","type":"exact"},{"name":"acetoin catabolism","type":"exact"},{"name":"acetoin degradation","type":"exact"}],"termid":"GO:0045150"}


id: GO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus development","synonyms":[{"name":"superior olive development","type":"related"}],"termid":"GO:0021718"}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: PBO:0029502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_curved_germ_tubes_(obsolete_FYPO:0002213)","termid":"PBO:0029502"}


id: PBO:0082269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease of high capacity and low affinity; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation ammonia permease activity regulated by TORC1 effectors, Npr1p and Par32p; MEP3 has a paralog, MEP1, that arose from the whole genome duplication","termid":"PBO:0082269"}


id: PBO:0077244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5A","termid":"PBO:0077244"}


id: PBO:0043700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 6","termid":"PBO:0043700"}


id: GO:0071757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a hexamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"hexameric IgM immunoglobulin complex","synonyms":[{"name":"hexameric IgM antibody","type":"exact"}],"termid":"GO:0071757"}


id: PBO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3 pseudogene 2","termid":"PBO:0042195"}


id: PBO:0028050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_bodies_present_in_increased_numbers_during_meiosis","termid":"PBO:0028050"}


id: PBO:0069096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 343, pseudogene","termid":"PBO:0069096"}


id: PBO:0089251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2 (Sam35)","termid":"PBO:0089251"}


id: PBO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 4","termid":"PBO:0075192"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: GO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host programmed cell death, leading to a decrease in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host programmed cell death","synonyms":[{"name":"down regulation by symbiont of host programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host programmed cell death","type":"narrow"},{"name":"inhibition of host programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host programmed cell death","type":"exact"},{"name":"suppression by symbiont of host PCD","type":"exact"},{"name":"suppression by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052041"}


id: GO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glomerular epithelial cell. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"part_of","term_name":"glomerular epithelium development","termid":"GO:0072010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}


id: GO:1900364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:TermGenie","GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA polyadenylation (obsolete GO:1900364)","synonyms":[{"name":"https://github.com/geneontology/go-ontology/issues/24924","type":"exact"},{"name":"negative regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900364"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: GO:1901529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"},{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of anion transmembrane transport","termid":"GO:1903961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of anion channel activity","synonyms":[{"name":"activation of anion channel activity","type":"narrow"},{"name":"up regulation of anion channel activity","type":"exact"},{"name":"up-regulation of anion channel activity","type":"exact"},{"name":"upregulation of anion channel activity","type":"exact"}],"termid":"GO:1901529"}


id: FYPO:0002265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased galactomannan level","termid":"FYPO:0001195"},{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002946","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell wall galactomannan level","synonyms":[{"name":"decreased cell wall galactomannan accumulation","type":"related"},{"name":"decreased cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall galactomannan level during vegetative growth","type":"exact"},{"name":"reduced cell wall galactomannan level","type":"exact"}],"termid":"FYPO:0002265"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: PR:O14075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glyoxylate/hydroxypyruvate reductase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01215","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase UNK4.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.10","secondary_identifiers":["UniProtKB:O14075"],"synonyms":[{"name":"Spom972h-ghrB","type":"exact"}],"termid":"PR:O14075"}


id: PBO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase-activating protein Spa2","termid":"PBO:0090248"}


id: GO:1901902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tyrocidine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:9352938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine metabolic process","synonyms":[{"name":"tyrocidine metabolism","type":"exact"}],"termid":"GO:1901902"}


id: FYPO:0007301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is normal (i.e. indistinguishable from wild type). Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein aggregate center formation","synonyms":[{"name":"normal PAC formation","type":"exact"},{"name":"normal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"normal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"normal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007301"}


id: GO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by ubiquitination (obsolete GO:0075346)","synonyms":[{"name":"modification by symbiont of host protein by ubiquitinylation","type":"exact"},{"name":"modification by symbiont of host protein by ubiquitylation","type":"exact"}],"termid":"GO:0075346"}


id: PBO:0057141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219b","termid":"PBO:0057141"}


id: PBO:0061893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive","termid":"PBO:0061893"}


id: GO:0097438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from dormancy","synonyms":[{"name":"release from dormancy","type":"exact"}],"termid":"GO:0097438"}


id: PR:O94489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.08","synonyms":[{"name":"EF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef3","type":"exact"}],"termid":"PR:O94489"}


id: PBO:0055820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPP antisense RNA 2","termid":"PBO:0055820"}


id: RO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of develops from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"},{"relation_name":"is_a","term_name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_into","termid":"RO:0002203"}


id: PBO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.96","termid":"PBO:0017571"}


id: PBO:0029485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_curved_vegetative_cell","termid":"PBO:0029485"}


id: GO:0098918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: SO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The configuration of the IG and TR variable (V), diversity (D) and joining (J) germline genes before DNA rearrangements (with or without constant (C) genes in undefined configuration. (germline, non rearranged regions of the IG DNA loci).","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene","synonyms":[{"name":"immune_gene","type":"exact"}],"termid":"SO:0002121"}


id: PBO:0088022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; contains multiple tetriatricopeptide repeats","termid":"PBO:0088022"}


id: GO:1900017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in inflammatory response","termid":"GO:1900015"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"positive regulation of cytokine production involved in acute inflammatory response","type":"narrow"},{"name":"up regulation of cytokine production involved in acute inflammatory response","type":"broad"},{"name":"up regulation of cytokine production involved in inflammatory response","type":"related"}],"termid":"GO:1900017"}


id: GO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:ds","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into diapause","secondary_identifiers":["Wikipedia:Diapause"],"termid":"GO:0055115"}


id: FYPO:0001835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium that is more acidic than standard fission yeast media (about 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on acidic medium","synonyms":[{"name":"normal cell population growth on acidic medium","type":"exact"},{"name":"normal cellular response to acidity","type":"related"},{"name":"normal vegetative cell population growth on acidic medium","type":"exact"}],"termid":"FYPO:0001835"}


id: GO:0098023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The basal end of the virus tail, which is used by the virus to attach to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tip","synonyms":[{"name":"bacteriophage tail tip","type":"narrow"}],"termid":"GO:0098023"}


id: PBO:0056199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA8 antisense RNA 1","termid":"PBO:0056199"}


id: PBO:0056384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 14","termid":"PBO:0056384"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: PBO:0054522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1922","termid":"PBO:0054522"}


id: PBO:0056909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC inducible lncRNA inactivating p53","termid":"PBO:0056909"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: GO:0047599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coformycin + NADP+ = 8-oxocoformycin + 2 H+ + NADPH.","definition_xrefs":["RHEA:23168","EC:1.1.1.235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"8-oxocoformycin reductase activity","secondary_identifiers":["MetaCyc:8-OXOCOFORMYCIN-REDUCTASE-RXN","KEGG_REACTION:R03667"],"synonyms":[{"name":"8-ketodeoxycoformycin reductase activity","type":"related"},{"name":"coformycin:NADP+ 8-oxidoreductase activity","type":"related"}],"termid":"GO:0047599"}


id: PATO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing granules.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granular","termid":"PATO:0001759"}


id: PBO:0068007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 309","termid":"PBO:0068007"}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: GO:0019265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine by the transamination of glyoxylate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine biosynthetic process, by transamination of glyoxylate","synonyms":[{"name":"glycine anabolism, by transamination of glyoxylate","type":"exact"},{"name":"glycine formation, by transamination of glyoxylate","type":"exact"},{"name":"glycine synthesis, by transamination of glyoxylate","type":"exact"}],"termid":"GO:0019265"}


id: FYPO:0001544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfur measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular sulfur level","synonyms":[{"name":"normal cellular sulfur accumulation","type":"related"},{"name":"normal cellular sulfur level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfur level during vegetative growth","type":"exact"},{"name":"normal cellular sulphur level","type":"exact"}],"termid":"FYPO:0001544"}


