# terms

id: PBO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 5","termid":"PBO:0045647"}


id: PBO:0034505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome-dependent_ATPase_activity","termid":"PBO:0034505"}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: PBO:0084822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, putative acetyltransferase; similar to bacterial galactoside O-acetyltransferases; induced by oleate in OAF1/PIP2-dependent manner; promoter contains oleate response element consensus sequence; non-essential gene","termid":"PBO:0084822"}


id: GO:0031622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of fever generation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"positive regulation of heat generation","termid":"GO:0031652"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fever generation","synonyms":[{"name":"activation of fever","type":"narrow"},{"name":"positive regulation of pyrexia","type":"exact"},{"name":"stimulation of fever","type":"narrow"},{"name":"up regulation of fever","type":"exact"},{"name":"up-regulation of fever","type":"exact"},{"name":"upregulation of fever","type":"exact"}],"termid":"GO:0031622"}


id: GO:1904170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bleb assembly.","definition_xrefs":["PMID:25651887","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of bleb assembly","synonyms":[{"name":"regulation of cell blebbing","type":"exact"}],"termid":"GO:1904170"}


id: FYPO:0002724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, elongated cell","synonyms":[{"name":"inviable following spore germination, single or double cell division, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, elongated cell","type":"exact"}],"termid":"FYPO:0002724"}


id: PBO:0048487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSAML antisense RNA 1","termid":"PBO:0048487"}


id: GO:0036221
data:
  {"annotated_genes":["SJAG_01651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92749],"is_not":false,"summary":null,"term":"GO:0036221"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + H2O = UMP + H+ + diphosphate.","definition_xrefs":["RHEA:29395","GOC:dgf","PMID:17899088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0047429"],"is_obsolete":false,"name":"UTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00662"],"synonyms":[{"name":"uridine triphosphate pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0036221","terms_by_termid":{"GO:0036221":null}}


id: GO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosterone","termid":"GO:0051412"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosterone stimulus","termid":"GO:0071386"}


id: PBO:0073382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding protein 1","termid":"PBO:0073382"}


id: PBO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member A","termid":"PBO:0047044"}


id: PBO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 157","termid":"PBO:0075108"}


id: MOD:01803
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to a methylated threonine, such as O-methyl-L-threonine or L-threonine methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"methylated threonine","termid":"MOD:01418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methylated threonine","synonyms":[{"name":"OMeThr","type":"exact"}],"termid":"MOD:01803"}


id: GO:1900419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of cellular alcohol catabolic process","termid":"GO:1900419"}


id: PR:000024856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is SYADFLRVYQSWNTFANPDRPNL, corresponding to amino acids 32-54 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor-like1","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"map2/Clv:P-factor-like1","type":"exact"}],"termid":"PR:000024856"}


id: GO:0160134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","termid":"GO:0160134"}


id: PBO:0071660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 1","termid":"PBO:0071660"}


id: GO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polyadenylation of viral mRNA through a polymerase stuttering mechanism. The stop signal present at the end of each gene comprises a stretch of uridine on which the viral polymerase acquires a stuttering behavior: after each adenine inserted, the polymerase moves back one nucleotide along with the mRNA. It resumes transcription adding a new adenine, then again moves back, thereby producing a polyA tail.","definition_xrefs":["VZ:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation of viral mRNA by polymerase stuttering","synonyms":[{"name":"polyA stuttering","type":"exact"}],"termid":"GO:0039698"}


id: PBO:0043091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 3","termid":"PBO:0043091"}


id: PBO:0068768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 5, pseudogene","termid":"PBO:0068768"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000293"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: PR:O13727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15A10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15A10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.07","synonyms":[{"name":"Spom972h-SPAC15A10.07","type":"exact"}],"termid":"PR:O13727"}


id: PBO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC-like protein, predicted cation transport regulator","termid":"PBO:0004648"}


id: GO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (-)-endo-fenchol + diphosphate.","definition_xrefs":["EC:4.2.3.10","RHEA:20565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(-)-endo-fenchol synthase activity","secondary_identifiers":["KEGG_REACTION:R02004","MetaCyc:4.2.3.10-RXN"],"synonyms":[{"name":"(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl pyrophosphate:(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-endo-fenchol-forming]","type":"related"}],"termid":"GO:0050437"}


id: PBO:0084855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation","termid":"PBO:0084855"}


id: PBO:0089285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp72","termid":"PBO:0089285"}


id: GO:0009705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vacuole that retains the same shape regardless of cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole membrane","synonyms":[{"name":"membrane of vacuole with cell cycle-independent morphology","type":"exact"},{"name":"tonoplast","type":"exact"},{"name":"vacuolar membrane","type":"broad"}],"termid":"GO:0009705"}


id: PBO:0059914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 37","termid":"PBO:0059914"}


id: PBO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex PHD finger subunit Cti6","termid":"PBO:0090047"}


id: GO:1900415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of fungal-type cell wall biogenesis.","definition_xrefs":["PMID:15509866","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900415)","synonyms":[{"name":"regulation of chitin- and beta-glucan-containing cell wall biogenesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900415"}


id: PBO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.2","termid":"PBO:0001085"}


id: PBO:0043192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKAP2 divergent transcript","termid":"PBO:0043192"}


id: GO:1990490
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large proton-transporting two-sector ATPase protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane and is found in Archaea.","definition_xrefs":["PMID:15473999","PMID:24650628","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"archaeal proton-transporting A-type ATPase complex","synonyms":[{"name":"A-type ATPase protein complex","type":"broad"},{"name":"archaeal A-type ATPase protein complex","type":"broad"}],"termid":"GO:1990490"}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: GO:1902731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"negatively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte proliferation","synonyms":[{"name":"down regulation of cartilage cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte proliferation","type":"exact"},{"name":"down-regulation of cartilage cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte proliferation","type":"exact"},{"name":"downregulation of cartilage cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte proliferation","type":"exact"},{"name":"inhibition of cartilage cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte proliferation","type":"narrow"},{"name":"negative regulation of cartilage cell proliferation","type":"exact"},{"name":"negative regulation of chondrocyte cell proliferation","type":"exact"}],"termid":"GO:1902731"}


id: FYPO:0000433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased fermentation","synonyms":[{"name":"fermentative metabolism: increased","type":"related"},{"name":"increased fermentation during mitotic cell cycle","type":"related"},{"name":"increased fermentation during vegetative growth","type":"exact"},{"name":"increased fermentative metabolism","type":"exact"}],"termid":"FYPO:0000433"}


id: PBO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology and distribution","termid":"PBO:0002611"}


id: GO:0075021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont cAMP mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP-mediated activation of appressorium formation (obsolete GO:0075021)","synonyms":[{"name":"cyclic AMP mediated activation of appressorium formation","type":"exact"}],"termid":"GO:0075021"}


id: GO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"regulation of calcium ion (Ca2+) mobilization","type":"exact"},{"name":"regulation of calcium mobilization","type":"exact"},{"name":"regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"exact"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051279"}


id: PBO:0049644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 47","termid":"PBO:0049644"}


id: GO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Xaa bonds.","definition_xrefs":["EC:3.4.22.8"],"gene_count":0,"genotype_count":0,"name":"obsolete clostripain activity (obsolete GO:0051404)","synonyms":[{"name":"Clostridium histolyticum proteinase B","type":"related"},{"name":"alpha-clostridipain","type":"related"},{"name":"clostridiopeptidase B activity","type":"exact"},{"name":"clostripain activity","type":"exact"}],"termid":"GO:0051404"}


id: CHEBI:16856
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione","termid":"CHEBI:16856"}


id: RO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p regulates levels of c if p regulates some amount (PATO:0000070) of c","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_levels_of","termid":"RO:0002332"}


id: PBO:0052079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 4","termid":"PBO:0052079"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080","OMSSA:94","PubMed:3467339","Unimod:47#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: GO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a nitrogenous group, other than amino, amidino or oxime, from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transferase activity, transferring other nitrogenous groups (obsolete GO:0016771)","synonyms":[{"name":"transferase activity, transferring other nitrogenous groups","type":"exact"}],"termid":"GO:0016771"}


id: FYPO:0001324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during vegetative growth","synonyms":[{"name":"decreased protein accumulation during vegetative growth","type":"related"},{"name":"decreased protein level during mitotic cell cycle","type":"related"},{"name":"reduced protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001324"}


id: GO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation","termid":"GO:0048762"}


id: GO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = acylmono-beta-D-galactosyl-diacylglycerol + mono-beta-D-galactosylacylglycerol.","definition_xrefs":["EC:2.3.1.134","MetaCyc:GALACTOLIPID-O-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"galactolipid O-acyltransferase activity","synonyms":[{"name":"galactolipid:galactolipid acyltransferase activity","type":"related"},{"name":"mono-beta-D-galactosyldiacylglycerol:mono-beta-D-galactosyldiacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0047909"}


id: GO:0008333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endosome to lysosome transport","termid":"GO:0008333"}


id: PBO:0058852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8081","termid":"PBO:0058852"}


id: GO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"}


id: PBO:0074749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 108","termid":"PBO:0074749"}


id: PR:Q9UT45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eng1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3(4)-beta-glucanase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.09","synonyms":[{"name":"Spom972h-eng1","type":"exact"},{"name":"endo-1,3-beta-glucanase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"endo-1,4-beta-glucanase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"laminarinase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT45"}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: GO:1904032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of t-SNARE clustering.","definition_xrefs":["GOC:TermGenie","PMID:22528485","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"t-SNARE clustering","termid":"GO:1990656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of t-SNARE clustering","termid":"GO:1904032"}


id: PBO:0052192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 2","termid":"PBO:0052192"}


id: GO:0038116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL21 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:15059845","GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 7 signaling pathway","type":"related"},{"name":"CCL21-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 21 signalling pathway","type":"exact"}],"termid":"GO:0038116"}


id: PBO:0038719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 14","termid":"PBO:0038719"}


id: PBO:0076180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 4A member 1","termid":"PBO:0076180"}


id: GO:1905515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a non-motile cilium.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:kmv","GOC:cilia","PMID:14521834","PMID:14521833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"non-motile cilium assembly","secondary_identifiers":["GO:0035058"],"synonyms":[{"name":"immotile primary cilium assembly","type":"related"},{"name":"non-motile cilium formation","type":"exact"},{"name":"nonmotile cilium assembly","type":"exact"},{"name":"nonmotile cilium formation","type":"exact"},{"name":"nonmotile primary cilia assembly","type":"related"},{"name":"nonmotile primary cilium assembly","type":"related"},{"name":"sensory cilium assembly","type":"related"},{"name":"sensory cilium biogenesis","type":"related"}],"termid":"GO:1905515"}


id: PBO:0076164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 2","termid":"PBO:0076164"}


id: SO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region present in the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intramembrane_polypeptide_region","secondary_identifiers":["BS:00156"],"synonyms":[{"name":"intramembrane","type":"related"},{"name":"intramembrane polypeptide region","type":"exact"}],"termid":"SO:0001075"}


id: PBO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiplakin 1","termid":"PBO:0046450"}


id: GO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pyrimidodiazepine + oxidized glutathione = 6-pyruvoyltetrahydropterin + 2 glutathione.","definition_xrefs":["EC:1.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, disulfide as acceptor","termid":"GO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyrimidodiazepine synthase activity","secondary_identifiers":["RHEA:10720","MetaCyc:1.5.4.1-RXN"],"synonyms":[{"name":"PDA synthase activity","type":"related"},{"name":"pyrimidodiazepine:glutathione-disulfide oxidoreductase (ring-opening, cyclizing)","type":"related"}],"termid":"GO:0004734"}


id: PBO:0056916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY lysine 48 deubiquitinase 2","termid":"PBO:0056916"}


id: GO:1903745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nematode pharyngeal pumping.","definition_xrefs":["GO_REF:0000058","PMID:25329901","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"},{"relation_name":"is_a","term_name":"negative regulation of eating behavior","termid":"GO:1903999"},{"relation_name":"negatively_regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharyngeal pumping","synonyms":[{"name":"down regulation of pharyngeal pumping","type":"exact"},{"name":"down regulation of pumping behavior","type":"related"},{"name":"down-regulation of pharyngeal pumping","type":"exact"},{"name":"down-regulation of pumping behavior","type":"related"},{"name":"downregulation of pharyngeal pumping","type":"exact"},{"name":"downregulation of pumping behavior","type":"related"},{"name":"inhibition of pharyngeal pumping","type":"narrow"},{"name":"inhibition of pumping behavior","type":"related"},{"name":"negative regulation of pumping behavior","type":"related"}],"termid":"GO:1903745"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: PBO:0074955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-6","termid":"PBO:0074955"}


id: FYPO:0003028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitosis","synonyms":[{"name":"normal F-actin patch localization during mitosis","type":"exact"},{"name":"normal actin cortical patch localisation during mitosis","type":"exact"},{"name":"normal actin cortical patch localization during mitosis during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch localization during mitosis during vegetative growth","type":"exact"},{"name":"normal actin cortical patch localization during mitotic M phase","type":"related"},{"name":"normal actin cortical patch localization during mitotic nuclear division","type":"exact"},{"name":"normal actin cortical patch location during mitosis","type":"related"},{"name":"normal actin patch localization during mitosis","type":"exact"}],"termid":"FYPO:0003028"}


id: FYPO:0006953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular asparagine level","synonyms":[{"name":"increased asparagine accumulation","type":"related"},{"name":"increased cellular L-asparagine level","type":"exact"},{"name":"increased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"increased cellular asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006953"}


id: PBO:0043780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A6","termid":"PBO:0043780"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:15165191","PMID:23151511","PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: PBO:0046084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 9","termid":"PBO:0046084"}


id: GO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(I) chains. The most common form of type I collagen is a heterotrimer containing two alpha1(I) chains and one alpha2(I) chain; homotrimers containing three alpha1(I) chains are also found. Type I collagen triple helices associate to form banded fibrils.","definition_xrefs":["GOC:sl","GOC:mah","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type I trimer","secondary_identifiers":["Wikipedia:Collagen_type_I"],"termid":"GO:0005584"}


id: PBO:0065272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 long non-coding RNA","termid":"PBO:0065272"}


id: PBO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3 pseudogene 2","termid":"PBO:0048713"}


id: PBO:0049012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol specific phospholipase D1","termid":"PBO:0049012"}


id: PBO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_chromatin","termid":"PBO:0036199"}


id: GO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-molecular-weight cytochrome c (hexadecaheme) (obsolete GO:0009475)","synonyms":[{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"exact"}],"termid":"GO:0009475"}


id: GO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.","definition_xrefs":["ISBN:0198506732","PubChem_Compound:1029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"hydroxylysine metabolic process","synonyms":[{"name":"hydroxylysine metabolism","type":"exact"}],"termid":"GO:0046946"}


id: PBO:0091883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase","termid":"PBO:0091883"}


id: PBO:0055474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2907","termid":"PBO:0055474"}


id: GO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanol, 2-methylbutanol, or 2-methylpropanol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to alcohol via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to alcohol via Ehrlich pathway","type":"exact"}],"termid":"GO:0000950"}


id: PBO:0081462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 331","termid":"PBO:0081462"}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: PBO:0074240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit beta","termid":"PBO:0074240"}


id: MOD:02014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a linoloylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"linoloylated residue","termid":"MOD:02015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-linoloylated residue","termid":"MOD:02014"}


id: PBO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog B","termid":"PBO:0047497"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PBO:0074473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 2","termid":"PBO:0074473"}


id: PBO:0017961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3 (predicted)","termid":"PBO:0017961"}


id: GO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Saccharomyces) (obsolete GO:0000174)","synonyms":[{"name":"inactivation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000174"}


id: PBO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND5B antisense RNA 1","termid":"PBO:0044878"}


id: GO:0034767
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transmembrane ion transport","type":"narrow"},{"name":"positive regulation of ion membrane transport","type":"exact"},{"name":"positive regulation of ion transmembrane transport","type":"broad"},{"name":"positive regulation of transmembrane ion transport","type":"exact"},{"name":"stimulation of transmembrane ion transport","type":"narrow"},{"name":"up regulation of transmembrane ion transport","type":"exact"},{"name":"up-regulation of transmembrane ion transport","type":"exact"},{"name":"upregulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034767","terms_by_termid":{"GO:1905665":null}}


id: GO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-canadine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:21456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-canadine synthase activity","secondary_identifiers":["EC:1.14.19.68","KEGG_REACTION:R04400","MetaCyc:1.1.3.36-RXN"],"synonyms":[{"name":"(S)-tetrahydroberberine synthase activity","type":"related"},{"name":"(S)-tetrahydrocolumbamine oxidase (methylenedioxy-bridge-forming) activity","type":"related"}],"termid":"GO:0047056"}


id: PBO:0055205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2630","termid":"PBO:0055205"}


id: PBO:0028149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2/U5/U6_snRNP_complex_level","termid":"PBO:0028149"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["EC:1.3.1.68","RHEA:15657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.68-RXN","UM-BBD_reactionID:r0224","KEGG_REACTION:R05314"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: FYPO:0005748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein export from nucleus during glucose starvation","synonyms":[{"name":"normal protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"normal protein export from nucleus during glucose depletion","type":"exact"},{"name":"normal protein export from nucleus during glucose deprivation","type":"exact"},{"name":"normal protein export from nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0005748"}


id: FYPO:0002656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased actin filament binding","synonyms":[{"name":"decreased F-actin binding","type":"exact"},{"name":"decreased filamentous actin binding","type":"related"},{"name":"decreased protein-protein interaction with actin filament","type":"exact"},{"name":"reduced actin filament binding","type":"exact"}],"termid":"FYPO:0002656"}


id: GO:1902080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"}


id: PBO:0077451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 1","termid":"PBO:0077451"}


id: GO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + H2O = 4-ureido-5-imidazole carboxylate.","definition_xrefs":["MetaCyc:R127-RXN","PMID:13278326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"xanthine hydrolase activity","synonyms":[{"name":"xanthinase activity","type":"exact"}],"termid":"GO:0043836"}


id: PBO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member A","termid":"PBO:0047114"}


id: GO:0008334
data:
  {"annotated_genes":["SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071044"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving an mRNA encoding a histone.","definition_xrefs":["PMID:17855393","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"histone mRNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone mRNA metabolism","type":"exact"},{"name":"stem-loop-containing histone mRNA 3'-end processing","type":"narrow"}],"termid":"GO:0008334","terms_by_termid":{"GO:0071044":null}}


id: GO:2000766
data:
  {"annotated_genes":["SJAG_05000","SJAG_00423","SJAG_03501","SJAG_04312","SJAG_04291"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91216,95125,97569,110828,114213],"is_not":false,"summary":null,"term":"GO:2000766"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00423":null,"SJAG_03501":null,"SJAG_04291":null,"SJAG_04312":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000766","terms_by_termid":{"GO:2000766":null}}


id: PBO:0066442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 3","termid":"PBO:0066442"}


id: FYPO:0003062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear migration involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal nucleus positioning","termid":"FYPO:0000517"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear congression during mating","synonyms":[{"name":"abnormal nuclear congression during karyogamy","type":"related"},{"name":"abnormal nuclear migration during mating","type":"exact"},{"name":"abnormal nuclear migration involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear movement during mating","type":"exact"},{"name":"abnormal nuclear movement during shmooing","type":"related"}],"termid":"FYPO:0003062"}


id: PBO:0091375
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the electron microscopy databank","termid":"PBO:0091375"}


id: PBO:0077402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 135","termid":"PBO:0077402"}


id: PBO:0066876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 176","termid":"PBO:0066876"}


id: PBO:0040655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-butyrobetaine hydroxylase 1","termid":"PBO:0040655"}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: GO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An nuclear membrane protein complex having arachidonate 5-lipoxygenase activity.","definition_xrefs":["PMID:19075240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"5-lipoxygenase complex","termid":"GO:0002180"}


id: FYPO:0006887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the sumoylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein sumoylation during vegetative growth","synonyms":[{"name":"normal protein sumolation during vegetative growth","type":"exact"},{"name":"normal protein sumoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006887"}


id: GO:1990238
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96891],"is_not":false,"summary":null,"term":"GO:1990238"},{"annotations":[96892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a double-stranded DNA molecule by creating internal breaks.","definition_xrefs":["PMID:22885404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"double-stranded DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA endodeoxyribonuclease activity","type":"exact"},{"name":"dsDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:1990238","terms_by_termid":{"GO:0106332":null,"GO:1990238":null}}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: PBO:0075455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 6","termid":"PBO:0075455"}


id: GO:0099569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cytoskeleton contained within the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic cytoskeleton","termid":"GO:0099569"}


id: GO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in cell wall organization or biogenesis (obsolete GO:0000197)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0000197"}


id: PBO:0049219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 3","termid":"PBO:0049219"}


id: PBO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein methyltransferase Mtq2 (predicted)","termid":"PBO:0002286"}


id: PBO:0091117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial intermembrane space Cmc1","termid":"PBO:0091117"}


id: GO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A discrete cell cycle in the third instar eye imaginal disc after progression of the morphogenetic furrow that contributes to compound eye morphogenesis. It is essential for generation of a sufficient pool of uncommitted cells to develop complete ommatidia.","definition_xrefs":["PMID:11257224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"second mitotic wave involved in compound eye morphogenesis","synonyms":[{"name":"second mitotic wave during compound eye morphogenesis","type":"related"}],"termid":"GO:0016330"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: FYPO:0004104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable spherical vegetative cell","synonyms":[{"name":"inviable spherical cell","type":"exact"},{"name":"inviable spherical cell during vegetative growth","type":"exact"},{"name":"inviable spherical vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spherical vegetative cell","type":"exact"},{"name":"spherical inviable cell","type":"exact"}],"termid":"FYPO:0004104"}


id: PBO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C pseudogene 2","termid":"PBO:0061614"}


id: PBO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit (predicted)","termid":"PBO:0005019"}


id: GO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to host endoplasmic reticulum membrane (obsolete GO:0044386)","termid":"GO:0044386"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","secondary_identifiers":["MetaCyc:BETSYN-PWY","MetaCyc:P542-PWY","MetaCyc:CHOLINE-BETAINE-ANA-PWY"],"synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: GO:0106027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:11585923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection organization","termid":"GO:0106027"}


id: PBO:0084867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084867"}


id: PBO:0025418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex1","termid":"PBO:0025418"}


id: PBO:0082202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; catalyzes sequential addition of the two terminal alpha 1,2-mannose residues to the Man5GlcNAc2-PP-dolichol intermediate during asparagine-linked glycosylation in the ER","termid":"PBO:0082202"}


id: PBO:0040537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 4","termid":"PBO:0040537"}


id: PBO:0088760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase Pcs60","termid":"PBO:0088760"}


id: PBO:0055417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2847","termid":"PBO:0055417"}


id: GO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 4 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-4 complex","synonyms":[{"name":"SNARE complex (Stx4, Snap25, Vamp2)","type":"narrow"},{"name":"Stx4-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070047"}


id: FYPO:0003484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","GO:1902967","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone","synonyms":[{"name":"abolished protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle midzone","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to spindle midzone abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003484"}


id: SO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone which is part of a tiling path. A tiling path is a set of sequencing substrates, typically clones, which have been selected in order to efficiently cover a region of the genome in preparation for sequencing and assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"},{"relation_name":"is_a","term_name":"tiling_path_fragment","termid":"SO:0000474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_clone","synonyms":[{"name":"tiling path clone","type":"exact"}],"termid":"SO:0000480"}


id: PBO:0091676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1773 family protein","termid":"PBO:0091676"}


id: GO:0099185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprised of intermediate filament and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic intermediate filament cytoskeleton organization","termid":"GO:0099185"}


id: SO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (one running N-terminal to C-terminal and one running C-terminal to N-terminal). Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i) and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they form two mutual backbone hydrogen bonds to each other's flanking peptide groups; this is known as a close pair of hydrogen bonds. The peptide backbone dihedral angles (phi, psi) are about (-140 degrees, 135 degrees) in antiparallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"antiparallel_beta_strand","secondary_identifiers":["BS:0000341"],"synonyms":[{"name":"antiparallel beta strand","type":"exact"}],"termid":"SO:0001112"}


id: GO:0093001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a storage polysaccharide into pyruvate through a glucose-1-phosphate intermediate, with the concomitant production of a small amount of ATP and the reduction of NAD to NADH.","definition_xrefs":["GOC:dph","GOC:glycolysis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycolysis from storage polysaccharide through glucose-1-phosphate","termid":"GO:0093001"}


id: PBO:0055219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2645","termid":"PBO:0055219"}


id: PR:O59762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gnr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein negative regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.09","synonyms":[{"name":"G protein negative regulator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gnr1","type":"exact"},{"name":"WD repeat-containing protein gnr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59762"}


id: GO:1903781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:rph","PMID:12967627","GO_REF:0000058","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"positively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac conduction","synonyms":[{"name":"activation of cardiac conduction","type":"narrow"},{"name":"up regulation of cardiac conduction","type":"exact"},{"name":"up-regulation of cardiac conduction","type":"exact"},{"name":"upregulation of cardiac conduction","type":"exact"}],"termid":"GO:1903781"}


id: GO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, dessication, and UV than vegetative myxobacteria.","definition_xrefs":["GOC:ds","ISBN:0122268008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxospore formation","termid":"GO:0034303"}


id: PBO:0073372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 4","termid":"PBO:0073372"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: GO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a specific cell fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"negatively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell fate specification","synonyms":[{"name":"down regulation of cell fate specification","type":"exact"},{"name":"down-regulation of cell fate specification","type":"exact"},{"name":"downregulation of cell fate specification","type":"exact"},{"name":"inhibition of cell fate specification","type":"narrow"},{"name":"suppression of cell fate","type":"exact"}],"termid":"GO:0009996"}


id: PATO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned towards","termid":"PATO:0002173"}


id: PBO:0041154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 9","termid":"PBO:0041154"}


id: GO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesonephros development","termid":"GO:0061213"}


id: PBO:0053310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-52 DREAM MuvB core complex component","termid":"PBO:0053310"}


id: PBO:0086329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with ubiquitin-like N terminus; subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage","termid":"PBO:0086329"}


id: PBO:0045645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 3","termid":"PBO:0045645"}


id: PBO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.25","termid":"PBO:0002643"}


id: PBO:0072262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS21 divergent transcript","termid":"PBO:0072262"}


id: GO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052234)","synonyms":[{"name":"negative aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052234"}


id: PBO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoferlin","termid":"PBO:0060360"}


id: MOD:01320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:176#K","PubMed:16078144","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01320"}


id: FYPO:0005216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0005709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"normal protein localization to mitotic SPB during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic metaphase","type":"exact"},{"name":"normal protein localization to spindle pole body during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle pole body during metaphase of mitosis","type":"exact"}],"termid":"FYPO:0005216"}


id: SO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in the genetic material inherited from the father.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_variant","synonyms":[{"name":"paternal variant","type":"exact"}],"termid":"SO:0001776"}


id: _global:recombined_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombined_to","termid":"_global:recombined_to"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["UniProtKB:Q9UTG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: PBO:0028073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_anucleate_cell_(obsolete_FYPO:0003761)","termid":"PBO:0028073"}


id: PBO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by mRNA stability","termid":"PBO:0004213"}


id: GO:0010872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cholesterol esterification. Cholesterol esterification is the lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and cholesterol. In the blood this process is associated with the conversion of free cholesterol into cholesteryl ester, which is then sequestered into the core of a lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cholesterol esterification (obsolete GO:0010872)","termid":"GO:0010872"}


id: GO:0140882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of zinc ions from a cell, into the extracellular region.","definition_xrefs":["PMID:17355957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"zinc export across plasma membrane","synonyms":[{"name":"zinc ion export from cell","type":"exact"}],"termid":"GO:0140882"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: PBO:0076128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 2","termid":"PBO:0076128"}


id: PBO:0064491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit D","termid":"PBO:0064491"}


id: PBO:0027591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV","termid":"PBO:0027591"}


id: PBO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst4","termid":"PBO:0017640"}


id: PBO:0058563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6505","termid":"PBO:0058563"}


id: GO:0003854
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105951],"is_not":false,"summary":null,"term":"GO:0003854"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-delta(5)-steroid + NAD+ = a 3-oxo-delta(5)-steroid + NADH + H+.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxy-delta5-steroid dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196372","Reactome:R-HSA-196350","MetaCyc:1.1.1.145-RXN","Reactome:R-HSA-193816","RHEA:24076","Reactome:R-HSA-192097","Reactome:R-HSA-193789"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854","terms_by_termid":{"GO:0003854":null}}


id: SO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K36_methylation_site","termid":"SO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_monomethylation_site","synonyms":[{"name":"H3K36 mono-methylation site","type":"exact"},{"name":"H3K36Me1","type":"related"}],"termid":"SO:0001722"}


id: GO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function held by products which directly regulate any step in the process of apoptosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis regulator activity (obsolete GO:0016329)","synonyms":[{"name":"apoptosis regulator activity","type":"exact"}],"termid":"GO:0016329"}


id: PBO:0085926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0085926"}


id: PBO:0086893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0086893"}


id: PBO:0083287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in other Saccharomyces species; overlaps the verified gene GPD1; deletion confers sensitivity to GSAO; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083287"}


id: PBO:0066178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4","termid":"PBO:0066178"}


id: PBO:0061225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 1","termid":"PBO:0061225"}


id: PBO:0089433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp2","termid":"PBO:0089433"}


id: GO:0006487
data:
  {"annotated_genes":["SJAG_00598","SJAG_02519","SJAG_01276","SJAG_03656","SJAG_04728","SJAG_00831","SJAG_00334","SJAG_03774","SJAG_01950","SJAG_01972","SJAG_01389","SJAG_05219","SJAG_02102","SJAG_05348","SJAG_02903","SJAG_04095","SJAG_00394","SJAG_03555","SJAG_03150","SJAG_01006","SJAG_03280","SJAG_02783","SJAG_03082","SJAG_04952","SJAG_00437","SJAG_04090","SJAG_02163","SJAG_04821","SJAG_03311","SJAG_04954","SJAG_03790","SJAG_04906","SJAG_02996","SJAG_03330","SJAG_00816","SJAG_03871","SJAG_01264","SJAG_03535","SJAG_04571","SJAG_03333","SJAG_03056","SJAG_03764","SJAG_04363","SJAG_01595","SJAG_03149","SJAG_01069","SJAG_00924","SJAG_02056","SJAG_00747","SJAG_04401","SJAG_01021","SJAG_04127","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82798,82928,84669,85851,88716,88717,88718,88719,93439,93547,94432,94433,94434,94435,94442,94453,94454,94455,94456,94607,95323,95470,95679,95715,96024,96467,97060,98296,98447,98523,99335,99539,100285,100717,100834,101763,102534,104870,105148,106580,106586,106780,108616,113310,114041,114371,114515],"is_not":false,"summary":null,"term":"GO:0006487"},{"annotations":[99334,89482,92057,86607,100768,94360,108472,106961,98023,95678,94012,82926,94068,95695,105146,112751],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[106962,105149,90942,109729,112855,98297,97069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"}]},"cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.","definition_xrefs":["RESID:AA0327","GOC:pr","RESID:AA0156","RESID:AA0151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein N-linked glycosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-glycan biosynthesis","type":"related"},{"name":"N-glycan metabolism","type":"related"},{"name":"protein amino acid N-linked glycosylation","type":"exact"}],"termid":"GO:0006487","terms_by_termid":{"GO:0006487":null,"GO:0006488":null,"GO:0018279":null}}


id: PBO:0018216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_dependence_to","termid":"PBO:0018216"}


id: GO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell proliferation","termid":"GO:0042100"},{"relation_name":"part_of","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostatic proliferation","synonyms":[{"name":"B lymphocyte homeostatic proliferation","type":"exact"},{"name":"B-cell homeostatic proliferation","type":"exact"},{"name":"B-lymphocyte homeostatic proliferation","type":"exact"}],"termid":"GO:0002358"}


id: GO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:tb","PMID:18846107","PMID:21494263","GOC:go_curators","ISBN:0198506732","GOC:cjm","GOC:mtg_apoptosis","GOC:dhl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","secondary_identifiers":["GO:0008632","GO:0006917","Wikipedia:Apoptosis"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915"}


id: GO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.","definition_xrefs":["ISBN:071673706X","GOC:bm","VZ:885","ISBN:0198506732","Wikipedia:Capsid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid","synonyms":[{"name":"quasispherical viral capsid","type":"exact"}],"termid":"GO:0019030"}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: SO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000452 transgene_attribute (obsolete SO:0000452)","termid":"SO:0000452"}


id: GO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the ADP-ribose group of NAD+ to the amino group at N2 of 2'-deoxyguanosine to yield N2-(alpha-ADP-ribos-1-yl)-2'-deoxyguanosine and its beta form.","definition_xrefs":["PMID:11592983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD DNA ADP-ribosyltransferase activity","termid":"GO:0140294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"2'-deoxyguanosine DNA ADP-ribosyltransferase activity","synonyms":[{"name":"NAD DNA ADP-ribosyltransferase activity","type":"broad"}],"termid":"GO:0030591"}


id: GO:0061604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [Molybdopterin-synthase sulfur-carrier protein]-Gly-Gly-AMP + [cysteine desulfurase]-S-sulfanyl-L-cysteine = AMP [molybdopterin-synthase sulfur-carrier protein]-Gly-NH-CH(2)-C(O)SH + cysteine desulfurase.","definition_xrefs":["EC:2.8.1.11","GOC:dph","PMID:18154309","PMID:22370186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"molybdopterin-synthase sulfurtransferase activity","secondary_identifiers":["RHEA:48612"],"termid":"GO:0061604"}


id: GO:0170007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a lipid droplet with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:35389430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"endoplasmic reticulum-lipid droplet tether activity","termid":"GO:0170007"}


id: GO:1901225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter involved in heart development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901225)","synonyms":[{"name":"down regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"}],"termid":"GO:1901225"}


id: PBO:0073146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 interacting protein","termid":"PBO:0073146"}


id: PBO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 5","termid":"PBO:0046595"}


id: PBO:0041667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein","termid":"PBO:0041667"}


id: PBO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 12","termid":"PBO:0062042"}


id: GO:0099614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported, tethered to or otherwise maintained in a spore cell wall.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to spore cell wall","synonyms":[{"name":"protein targeting to spore cell wall","type":"related"}],"termid":"GO:0099614"}


id: PR:P40386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine biosynthetic bifunctional enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.10c","synonyms":[{"name":"Spom972h-thi4","type":"exact"}],"termid":"PR:P40386"}


id: PBO:0081930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger NFX1-type containing 1","termid":"PBO:0081930"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PBO:0079911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1","termid":"PBO:0079911"}


id: PBO:0051596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22","termid":"PBO:0051596"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: GO:0071035
data:
  {"annotated_genes":["SJAG_01521","SJAG_04084","SJAG_04321","SJAG_01176","SJAG_00854","SJAG_04006","SJAG_03984","SJAG_01191","SJAG_01818","SJAG_04824","SJAG_03179","SJAG_04818","SJAG_04153","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83818,87751,88634,91539,92896,97806,100173,101036,102271,103278,109207,111421,111880,114291],"is_not":false,"summary":null,"term":"GO:0071035"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.","definition_xrefs":["PMID:18591258","GOC:dgf","GOC:krc","PMID:15173578","PMID:15572680","PMID:15935758","PMID:17652137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent rRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0071035","terms_by_termid":{"GO:0071035":null}}


id: FYPO:0003146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrostatic pressure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hydrostatic pressure","synonyms":[{"name":"decreased growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"hypersensitive to hydrostatic pressure","type":"exact"},{"name":"sensitive to hydrostatic pressure during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrostatic pressure during vegetative growth","type":"exact"}],"termid":"FYPO:0003146"}


id: GO:0008687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphenylacetate + O2 = 5-formyl-2-hydroxyhepta-2,4-dienedioate + H+.","definition_xrefs":["EC:1.13.11.15","RHEA:15633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03303","UM-BBD_reactionID:r0364","MetaCyc:1.13.11.15-RXN"],"synonyms":[{"name":"3,4-dihydroxyphenylacetate:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"3,4-dihydroxyphenylacetic acid 2,3-dioxygenase activity","type":"related"},{"name":"HPC dioxygenase activity","type":"related"},{"name":"homoprotocatechuate 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0008687"}


id: GO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"HGF receptor signaling pathway","type":"exact"},{"name":"HGF receptor signalling pathway","type":"exact"},{"name":"Met signaling pathway","type":"narrow"}],"termid":"GO:0048012"}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: GO:0120079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:8621557","GOC:mah","PMID:20705471"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microfilament motor activity (obsolete GO:0120079)","synonyms":[{"name":"regulation of actin filament motor activity","type":"exact"},{"name":"regulation of actin-activated ATPase activity","type":"related"},{"name":"regulation of actin-dependent ATPase activity","type":"related"},{"name":"regulation of actin-filament motor activity","type":"exact"},{"name":"regulation of muscle motor activity","type":"narrow"},{"name":"regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120079"}


id: PBO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-O ortholog Mal2","termid":"PBO:0002405"}


id: PBO:0089942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog8","termid":"PBO:0089942"}


id: GO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-975926","MetaCyc:2.4.1.144-RXN","RHEA:15509"],"synonyms":[{"name":"GnTIII activity","type":"related"},{"name":"N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:beta-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase III activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase III","type":"related"}],"termid":"GO:0003830"}


id: GO:0035597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-isopentenyladenosine (i6A) in tRNA, to form 2-methylthio-N6-isopentenyladenosine (ms2i6A).","definition_xrefs":["PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"N6-isopentenyladenosine methylthiotransferase activity","synonyms":[{"name":"i6A methylthiotransferase activity","type":"exact"}],"termid":"GO:0035597"}


id: PBO:0058299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4673","termid":"PBO:0058299"}


id: GO:0036213
data:
  {"annotated_genes":["SJAG_04498","SJAG_01894","SJAG_02700","SJAG_03379","SJAG_03581","SJAG_04776","SJAG_04887","SJAG_04077","SJAG_03631","SJAG_03703","SJAG_00268","SJAG_01665","SJAG_04597","SJAG_03936","SJAG_02645","SJAG_02431","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90905,96646,98150,108211,96402,93696,93307,83701,113878,94583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[99464],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[82958,89999,90174,109310,106397],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[103795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031991"}]},"cv_name":"biological_process","definition":"The process of an actomyosin ring getting smaller in diameter.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00845":null,"SJAG_01665":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02700":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"contractile ring constriction","type":"exact"}],"termid":"GO:0036213","terms_by_termid":{"GO:0031991":null,"GO:1902404":null,"GO:1903472":null,"GO:1903473":null}}


id: GO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, cleaving Phe24-Phe, but not Leu15-Tyr and Phe25-Tyr in the B chain of insulin.","definition_xrefs":["EC:3.4.23.32"],"gene_count":0,"genotype_count":0,"name":"obsolete scytalidopepsin B activity (obsolete GO:0046560)","synonyms":[{"name":"Ganoderma lucidum aspartic proteinase activity","type":"related"},{"name":"Ganoderma lucidum carboxyl proteinase activity","type":"related"},{"name":"SLB","type":"related"},{"name":"Scytalidium aspartic proteinase B activity","type":"related"},{"name":"Scytalidium lignicolum aspartic proteinase B","type":"related"},{"name":"scytalidopepsin B activity","type":"exact"}],"termid":"GO:0046560"}


id: GO:2001107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"negative regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"negative regulation of RhoGEF","type":"exact"}],"termid":"GO:2001107"}


id: PBO:0065109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C delta","termid":"PBO:0065109"}


id: GO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell within the dorsal ectoderm becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf","GOC:go_curators","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate determination","termid":"GO:0035028"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate determination","termid":"GO:0007393"}


id: GO:1904093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GO_REF:0000058","GOC:bhm","GOC:TermGenie","PMID:25736836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"negatively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagic cell death","synonyms":[{"name":"down regulation of autophagic cell death","type":"exact"},{"name":"down regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down regulation of type II programmed cell death","type":"related"},{"name":"down-regulation of autophagic cell death","type":"exact"},{"name":"down-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down-regulation of type II programmed cell death","type":"related"},{"name":"downregulation of autophagic cell death","type":"exact"},{"name":"downregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"downregulation of type II programmed cell death","type":"related"},{"name":"inhibition of autophagic cell death","type":"narrow"},{"name":"inhibition of programmed cell death by macroautophagy","type":"narrow"},{"name":"inhibition of type II programmed cell death","type":"related"},{"name":"negative regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"negative regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904093"}


id: PBO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 4","termid":"PBO:0072017"}


id: PBO:0086213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to cruciform DNA structures; CRP1 has a paralog, MDG1, that arose from the whole genome duplication","termid":"PBO:0086213"}


id: PBO:0088991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12","termid":"PBO:0088991"}


id: PBO:0055171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2595","termid":"PBO:0055171"}


id: PBO:0072641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphate and 5'-OH ligase","termid":"PBO:0072641"}


id: GO:1990790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glial cell derived neurotrophic factor stimulus.","definition_xrefs":["PMID:20877310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glial cell derived neurotrophic factor","synonyms":[{"name":"response to ATF","type":"exact"},{"name":"response to GDNF","type":"exact"},{"name":"response to astrocyte-derived trophic factor","type":"exact"}],"termid":"GO:1990790"}


id: GO:0042439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol) and compounds derived from it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine-containing compound metabolic process","synonyms":[{"name":"ethanolamine and derivative metabolic process","type":"exact"},{"name":"ethanolamine and derivative metabolism","type":"exact"},{"name":"ethanolamine-containing compound metabolism","type":"exact"}],"termid":"GO:0042439"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: PBO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin 1","termid":"PBO:0044582"}


id: PBO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII A chain","termid":"PBO:0046813"}


id: GO:0043896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in (1->6)-alpha-D-glucans and derived oligosaccharides.","definition_xrefs":["EC:3.2.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan 1,6-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.70-RXN"],"synonyms":[{"name":"exo-1,6-alpha-glucosidase activity","type":"related"},{"name":"exo-1,6-beta-glucosidase","type":"related"},{"name":"glucan alpha-1,6-D-glucohydrolase activity","type":"related"},{"name":"glucan-1,6-alpha-glucosidase activity","type":"exact"},{"name":"glucodextranase activity","type":"related"},{"name":"glucodextrinase","type":"broad"}],"termid":"GO:0043896"}


id: PBO:0045176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A4","termid":"PBO:0045176"}


id: PBO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 7","termid":"PBO:0043618"}


id: PBO:0056250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein","termid":"PBO:0056250"}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: PBO:0078203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-5","termid":"PBO:0078203"}


id: GO:0051483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, independent of mevalonate. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-independent biosynthesis, it is produced from pyruvate and glyceraldehyde 3-phosphate via intermediates including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-independent","synonyms":[{"name":"mevalonate-independent terpene biosynthesis","type":"narrow"},{"name":"mevalonate-independent terpene biosynthetic process","type":"narrow"},{"name":"mevalonate-independent terpenoid biosynthesis","type":"exact"},{"name":"mevalonate-independent terpenoid biosynthetic process","type":"exact"},{"name":"terpene biosynthesis, mevalonate-independent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-independent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-independent","type":"exact"},{"name":"terpenoid formation, mevalonate-independent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-independent","type":"exact"}],"termid":"GO:0051483"}


id: GO:0050676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urothelial cell proliferation","synonyms":[{"name":"down regulation of urothelial cell proliferation","type":"exact"},{"name":"down-regulation of urothelial cell proliferation","type":"exact"},{"name":"downregulation of urothelial cell proliferation","type":"exact"},{"name":"inhibition of urothelial cell proliferation","type":"narrow"}],"termid":"GO:0050676"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: GO:1903523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10659969","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"negatively_regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood circulation","synonyms":[{"name":"down regulation of blood circulation","type":"exact"},{"name":"down regulation of hemolymph circulation","type":"related"},{"name":"down-regulation of blood circulation","type":"exact"},{"name":"down-regulation of hemolymph circulation","type":"related"},{"name":"downregulation of blood circulation","type":"exact"},{"name":"downregulation of hemolymph circulation","type":"related"},{"name":"inhibition of blood circulation","type":"narrow"},{"name":"inhibition of hemolymph circulation","type":"related"},{"name":"negative regulation of hemolymph circulation","type":"related"}],"termid":"GO:1903523"}


id: PBO:0051055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2B (non-functional)","termid":"PBO:0051055"}


id: GO:0100005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates ethanol catabolic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ethanol catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100005)","termid":"GO:0100005"}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: GO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of killing of cells of another organism","secondary_identifiers":["GO:0052248","GO:0052433","GO:0044531","GO:0052459"],"synonyms":[{"name":"modulation by organism of apoptotic process in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation of programmed cell death in other organism","type":"narrow"},{"name":"modulation of programmed cell death in other organism involved in symbiotic interaction","type":"narrow"},{"name":"regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051709"}


id: GO:0102338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxotetracosanoyl-CoA. + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-lignoceronyl-CoA synthase activity (obsolete GO:0102338)","termid":"GO:0102338"}


id: GO:1900388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of vesicle-mediated transport.","definition_xrefs":["PMID:18622392","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900388)","synonyms":[{"name":"regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900388"}


id: FYPO:0007957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule rescue (the transition from shrinkage to growth) is abnormal. The frequency of rescues as well as the organisation can be affected.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule rescue","termid":"FYPO:0007957"}


id: GO:0061705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, to yield fructose-6-phosphate through both glucose and fructose intermediates.","definition_xrefs":["GOC:dph","MetaCyc:PWY-621","PMID:15012287","GOC:glycolysis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate through glucose and fructose","termid":"GO:0061705"}


id: GO:0006078
data:
  {"annotated_genes":["SJAG_02590","SJAG_02446","SJAG_00771","SJAG_04073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86072,89798,98181,112551],"is_not":false,"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00771":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,6-beta-glucan anabolism","type":"exact"},{"name":"1,6-beta-glucan biosynthesis","type":"exact"},{"name":"1,6-beta-glucan biosynthetic process","type":"exact"},{"name":"1,6-beta-glucan formation","type":"exact"},{"name":"1,6-beta-glucan synthesis","type":"exact"},{"name":"beta-1,6 glucan anabolism","type":"exact"},{"name":"beta-1,6 glucan biosynthesis","type":"exact"},{"name":"beta-1,6 glucan biosynthetic process","type":"exact"},{"name":"beta-1,6 glucan formation","type":"exact"},{"name":"beta-1,6 glucan synthesis","type":"exact"}],"termid":"GO:0006078","terms_by_termid":{"GO:0006078":null}}


id: FYPO:0000950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"elongated aseptate vegetative cell","synonyms":[{"name":"elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated aseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0000950"}


id: PBO:0062510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 2","termid":"PBO:0062510"}


id: PBO:0055288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2715","termid":"PBO:0055288"}


id: GO:0102742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 3,4-dihydroxyphenylpyruvate + NADPH = (2R)-3-(3,4-dihydroxyphenyl)lactate + NADP.","definition_xrefs":["GOC:pz","EC:1.1.1.237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"R(+)-3,4-dihydroxyphenyllactate:NADP+ oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-7632"],"termid":"GO:0102742"}


id: GO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host (obsolete GO:0052133)","synonyms":[{"name":"positive aerotaxis within host","type":"exact"}],"termid":"GO:0052133"}


id: PBO:0077493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 intronic transcript 1","termid":"PBO:0077493"}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["Wikipedia:Nerve_growth_factor","PMID:22399805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: PBO:0078450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 3","termid":"PBO:0078450"}


id: PBO:0086695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; intron is predicted but not detected experimentally; YLR464W overlaps the verified gene YRF1-4/YLR466W and two dubious ORFs YLR463C and YLR465C","termid":"PBO:0086695"}


id: PBO:0073813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 15","termid":"PBO:0073813"}


id: GO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of peptide secretion","termid":"GO:0002791"}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: GO:0031922
data:
  {"annotated_genes":["SJAG_03652","SJAG_03808","SJAG_02962","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114742,85613,113466,85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"}]},"cv_name":"biological_process","definition":"The directed movement of pyridoxamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"vitamin B6 transport","termid":"GO:0031919"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyridoxamine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031922","terms_by_termid":{"GO:1903091":null}}


id: GO:0008970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate.","definition_xrefs":["EC:3.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phospholipase A1 activity","secondary_identifiers":["Reactome:R-HSA-1482932","MetaCyc:PHOSPHOLIPASE-A1-RXN","Reactome:R-HSA-1482862","Reactome:R-HSA-1482827","Reactome:R-HSA-1482847","Reactome:R-HSA-5694485","Reactome:R-HSA-1482892","RHEA:18689","Reactome:R-HSA-1482828","Reactome:R-HSA-1482920"],"synonyms":[{"name":"phosphatidylcholine 1-acylhydrolase activity","type":"exact"}],"termid":"GO:0008970"}


id: PBO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, TTC27 family","termid":"PBO:0002731"}


id: GO:1900381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of asperthecin biosynthetic process","termid":"GO:1900379"},{"relation_name":"positively_regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of asperthecin biosynthetic process","synonyms":[{"name":"up regulation of asperthecin biosynthesis","type":"exact"},{"name":"activation of asperthecin biosynthesis","type":"exact"},{"name":"activation of asperthecin biosynthetic process","type":"narrow"},{"name":"activation of asperthecin formation","type":"exact"},{"name":"activation of asperthecin synthesis","type":"exact"},{"name":"positive regulation of asperthecin biosynthesis","type":"exact"},{"name":"positive regulation of asperthecin formation","type":"exact"},{"name":"positive regulation of asperthecin synthesis","type":"exact"},{"name":"up regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up regulation of asperthecin formation","type":"exact"},{"name":"up regulation of asperthecin synthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up-regulation of asperthecin formation","type":"exact"},{"name":"up-regulation of asperthecin synthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthetic process","type":"exact"},{"name":"upregulation of asperthecin formation","type":"exact"},{"name":"upregulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900381"}


id: PBO:0089660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin, Far8/Csc3","termid":"PBO:0089660"}


id: PBO:0111442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation inhibitor, IMPACT domain protein","termid":"PBO:0111442"}


id: PBO:0042830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 3","termid":"PBO:0042830"}


id: GO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah","PMID:29286137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-11 production","termid":"GO:0032654"},{"relation_name":"negatively_regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-11 production","secondary_identifiers":["GO:0150170","GO:0045364"],"synonyms":[{"name":"down regulation of interleukin-11 production","type":"exact"},{"name":"down-regulation of interleukin-11 production","type":"exact"},{"name":"downregulation of interleukin-11 production","type":"exact"},{"name":"inhibition of interleukin-11 production","type":"narrow"},{"name":"negative regulation of IL-11 production","type":"exact"},{"name":"negative regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032694"}


id: PR:O42889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.05c gene.","definition_xrefs":["UniProtKB:O42889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.05c","synonyms":[{"name":"Spom972h-SPBC8E4.05c","type":"exact"}],"termid":"PR:O42889"}


id: PBO:0057389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548c","termid":"PBO:0057389"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: PBO:0061638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 2, pseudogene","termid":"PBO:0061638"}


id: GO:0170034
data:
  {"annotated_genes":["SJAG_01461","SJAG_03306","SJAG_01466","SJAG_00636","SJAG_00432","SJAG_04688","SJAG_01630","SJAG_02388","SJAG_04577","SJAG_00359","SJAG_03152","SJAG_03312","SJAG_00832","SJAG_00881","SJAG_03614","SJAG_00412","SJAG_02309","SJAG_01574","SJAG_00283","SJAG_00419","SJAG_02313","SJAG_04425","SJAG_03692","SJAG_01766","SJAG_02450","SJAG_00695","SJAG_00660","SJAG_02689","SJAG_01404","SJAG_04953","SJAG_04042","SJAG_02791","SJAG_04305","SJAG_00309","SJAG_00392","SJAG_00635","SJAG_01955","SJAG_01880","SJAG_00714","SJAG_00120","SJAG_04549","SJAG_03457","SJAG_00234","SJAG_04964","SJAG_00518","SJAG_01592","SJAG_04145","SJAG_02832","SJAG_03671","SJAG_00502","SJAG_03266","SJAG_02293","SJAG_03102","SJAG_03914","SJAG_03881","SJAG_00869","SJAG_04459","SJAG_03141","SJAG_00582","SJAG_02290","SJAG_02972","SJAG_01019","SJAG_01061","SJAG_00395","SJAG_04449","SJAG_03712","SJAG_00495","SJAG_03124","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106965,65410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[107807,93823,102324,114382,106336,88325,106953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[98351,99203,114383,93834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[97890,106666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107709,83278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[97613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[91118,106377,92530,105318,97614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[89859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[89786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[86782,90074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[101794,107868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[97891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[97249,113731,107111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[106378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[96370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[95688,91190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[96354,102824,94698,108344,88173,85239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[102825,88174,94699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[104455,85300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[107712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033585"},{"annotations":[102586,86370,97504,95850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[87717,106013,95955,112921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[91986,97652,105563,88547,85826,92316,96918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009085"},{"annotations":[96919,94017,91987,92317,105564,85827,97653,109400,88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[101795,111771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[94207,106967,111772,107869,92282,98464,94090,85499,97616,99361,101796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[99392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[95851,86371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006561"},{"annotations":[96546,107870,101797,111773,67521,106544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.","definition_xrefs":["GOC:edw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic 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acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"L-amino acid anabolism","type":"exact"},{"name":"L-amino acid biosynthesis","type":"exact"},{"name":"L-amino acid formation","type":"exact"},{"name":"L-amino acid synthesis","type":"exact"}],"termid":"GO:0170034","terms_by_termid":{"GO:0006526":null,"GO:0006529":null,"GO:0006532":null,"GO:0006535":null,"GO:0006542":null,"GO:0006545":null,"GO:0006561":null,"GO:0006564":null,"GO:0009085":null,"GO:0009086":null,"GO:0009088":null,"GO:0009089":null,"GO:0009090":null,"GO:0009094":null,"GO:0019264":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019344":null,"GO:0019509":null,"GO:0019878":null,"GO:0033585":null,"GO:0042450":null,"GO:0052707":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1990355":null}}


id: PBO:0084395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084395"}


id: GO:0010765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium ion transport","termid":"GO:0010765"}


id: PBO:0072408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 13","termid":"PBO:0072408"}


id: GO:1900088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of inositol biosynthetic process","synonyms":[{"name":"regulation of inositol anabolism","type":"exact"},{"name":"regulation of inositol biosynthesis","type":"exact"},{"name":"regulation of inositol formation","type":"exact"},{"name":"regulation of inositol synthesis","type":"exact"},{"name":"regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900088"}


id: PBO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted)","termid":"PBO:0000091"}


id: FYPO:0006596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs transcribed from genes encoding flocculins measured in a cell is higher than normal (i.e. higher than observed in wild-type cells).","definition_xrefs":["PMID:29878109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of flocculin gene mRNA during vegetative growth","synonyms":[{"name":"increased flocculin gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of flocculin gene RNA during vegetative growth","type":"exact"},{"name":"increased level of flocculin gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of flocculin gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006596"}


id: PBO:0055627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3066","termid":"PBO:0055627"}


id: FYPO:0004051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutathione transferase activity","termid":"FYPO:0003981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione transferase activity during stationary phase","synonyms":[{"name":"increased glutathione transferase activity in stationary phase","type":"exact"}],"termid":"FYPO:0004051"}


id: PBO:0090148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin, C-terminal","termid":"PBO:0090148"}


id: PBO:0081501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 402, pseudogene","termid":"PBO:0081501"}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: PBO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine supersensitive","termid":"PBO:0012259"}


id: PR:P23566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.07c","secondary_identifiers":["UniProtKB:P23566"],"synonyms":[{"name":"RAD6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC18B11.07c","type":"related"},{"name":"Spom972h-UBE2B","type":"exact"},{"name":"ubc2","type":"related"},{"name":"ubiquitin carrier protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23566"}


id: PBO:0050404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 6","termid":"PBO:0050404"}


id: FYPO:0005471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate synthase activity using NADH as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate synthase (NADH) activity","termid":"FYPO:0005470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished glutamate synthase (NADH) activity","synonyms":[{"name":"abolished L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abolished NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abolished NADH: GOGAT activity","type":"related"},{"name":"abolished glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"},{"name":"glutamate synthase (NADH) activity abolished","type":"exact"}],"termid":"FYPO:0005471"}


id: PBO:0071105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 107","termid":"PBO:0071105"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: GO:0102154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 8C-glucosyl-2-hydroxynaringenin + UDP + 2 H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"8C-naringenin dibenzoylmethane tautomer glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11685"],"termid":"GO:0102154"}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: PR:O13782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.04c","synonyms":[{"name":"CAAX farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpp1","type":"exact"},{"name":"ras proteins prenyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13782"}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: GO:0071238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brefeldin A","termid":"GO:0031001"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brefeldin A","termid":"GO:0071238"}


id: GO:0030150
data:
  {"annotated_genes":["SJAG_03560","SJAG_01684","SJAG_01615","SJAG_01597","SJAG_03415","SJAG_04014","SJAG_01879","SJAG_00373","SJAG_02917","SJAG_05259","SJAG_04432","SJAG_04336","SJAG_04996","SJAG_01442","SJAG_02077","SJAG_00564","SJAG_03358","SJAG_01120","SJAG_03502","SJAG_04218","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83776,84997,86384,90111,92525,94929,95114,95216,96011,98425,99033,100960,101979,103332,103398,103421,105743,107693,111209,112792,113242],"is_not":false,"summary":null,"term":"GO:0030150"}]},"cv_name":"biological_process","definition":"The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00564":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"protein import into mitochondrial matrix","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial matrix protein import","type":"exact"},{"name":"mitochondrial translocation","type":"broad"},{"name":"protein transport into mitochondrial matrix","type":"exact"}],"termid":"GO:0030150","terms_by_termid":{"GO:0030150":null}}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: PBO:0074077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 1","termid":"PBO:0074077"}


id: PBO:0055138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2557","termid":"PBO:0055138"}


id: GO:1900376
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900376","terms_by_termid":{"GO:1905569":null}}


id: PBO:0091968
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"III:g.1774235_1774236insGATC","termid":"PBO:0091968"}


id: PBO:0030044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_iron_starvation","termid":"PBO:0030044"}


id: GO:0017111
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id: GO:0021594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dgh","GOC:cls","ISBN:0838580343","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere formation","termid":"GO:0021594"}


id: MOD:00833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-glucosyl-asparagine.","definition_xrefs":["PubMed:3410849","PubMed:1569073","RESID:AA0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"N4-hexosylated asparagine","termid":"MOD:01346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-glucosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc)","type":"exact"},{"name":"CARBOHYD N-linked (Glc) asparagine","type":"exact"},{"name":"N4-(D-glucopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-asparagine-glucoside","type":"exact"},{"name":"N4-glucosyl-L-asparagine","type":"exact"},{"name":"N4-glucosylasparagine","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GlcAsn","type":"exact"}],"termid":"MOD:00833"}


id: GO:0006213
data:
  {"annotated_genes":["SJAG_03213","SJAG_03771","SJAG_04264","SJAG_00885","SJAG_00694","SJAG_00957","SJAG_05029","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101278,103085],"is_not":false,"summary":null,"term":"GO:0006213"},{"annotations":[84657,104224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[86132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[109783,93395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[107816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["ISBN:0140512713","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01673":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleoside metabolism","type":"exact"}],"termid":"GO:0006213","terms_by_termid":{"GO:0006213":null,"GO:0009972":null,"GO:0043097":null,"GO:0046132":null,"GO:0046135":null}}


id: PR:O74441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like protein ctl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.11c","synonyms":[{"name":"Spom972h-ctl1","type":"exact"}],"termid":"PR:O74441"}


id: GO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-idonate + NADP+ = 5-dehydro-D-gluconate + NADPH.","definition_xrefs":["MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate 2-dehydrogenase activity (obsolete GO:0050027)","secondary_identifiers":["RHEA:21176","EC:1.1.1.128"],"synonyms":[{"name":"5-keto-D-gluconate 2-reductase activity","type":"related"},{"name":"5-ketogluconate 2-reductase activity","type":"related"},{"name":"5-ketoglucono-idono-reductase activity","type":"related"},{"name":"5KGR","type":"related"},{"name":"L-idonate 2-dehydrogenase activity","type":"exact"},{"name":"L-idonate dehydrogenase activity","type":"related"},{"name":"L-idonate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"reductase, 5-ketogluconate 5- (L-idonate-forming)","type":"related"}],"termid":"GO:0050027"}


id: GO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted contributing to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060739"}


id: GO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconal = versicolorin B + H2O.","definition_xrefs":["MetaCyc:RXN-9494","PMID:8784203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"versicolorin B synthase activity","secondary_identifiers":["EC:4.2.1.143","RHEA:33859"],"termid":"GO:0046572"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["GO_REF:0000058","PMID:25194028","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: GO:0031649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism produces heat, thereby raising its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat generation","termid":"GO:0031649"}


id: PBO:0087025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L12A; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12A has a paralog, RPL12B, that arose from the whole genome duplication","termid":"PBO:0087025"}


id: PBO:0080237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuole membrane protein 1","termid":"PBO:0080237"}


id: PBO:0081318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 1","termid":"PBO:0081318"}


id: MOD:01838
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine.","definition_xrefs":["PubMed:19155267","PubMed:2544544","RESID:AA0123#LYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"MOD_RES Lysino-D-alanine (Lys)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"alaninolysine","type":"exact"},{"name":"lysino-D-alanine","type":"exact"}],"termid":"MOD:01838"}


id: GO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-16 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-16 production","secondary_identifiers":["GO:0042234","GO:0072614"],"synonyms":[{"name":"IL-16 production","type":"exact"},{"name":"LCF production","type":"narrow"},{"name":"interleukin-16 biosynthetic process","type":"narrow"},{"name":"interleukin-16 secretion","type":"narrow"},{"name":"pro-interleukin-16 production","type":"exact"}],"termid":"GO:0032619"}


id: PBO:0015258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II, multifunctional enzyme Trp1","termid":"PBO:0015258"}


id: GO:1902178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic signaling pathway that starts with a ligand binding to, or being withdrawn from, a fibroblast growth factor receptor (FGFR).","definition_xrefs":["GOC:TermGenie","GOC:pm","GOC:pr","PMID:17561467","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor apoptotic signaling pathway","synonyms":[{"name":"FGF receptor signaling pathway involved in apoptosis","type":"narrow"},{"name":"FGF receptor signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGF receptor signaling pathway involved in apoptotic process","type":"exact"},{"name":"FGF receptor signaling pathway involved in apoptotic program","type":"narrow"},{"name":"FGF receptor signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGF receptor signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGF receptor signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGF receptor signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptosis","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGF receptor signalling pathway involved in apoptotic process","type":"exact"},{"name":"FGF receptor signalling pathway involved in apoptotic program","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGF receptor signalling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGF receptor signalling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGF receptor signalling pathway involved in type I programmed cell death","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptosis","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGFR signaling pathway involved in apoptotic process","type":"exact"},{"name":"FGFR signaling pathway involved in apoptotic program","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGFR signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGFR signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGFR signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptosis","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic process","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic program","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"fibroblast growth factor receptor signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptosis","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic cell death","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic process","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic program","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"fibroblast growth factor receptor signalling pathway involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902178"}


id: GO:0019970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-11.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-11 binding","synonyms":[{"name":"IL-11 binding","type":"exact"}],"termid":"GO:0019970"}


id: FYPO:0001925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to gamma radiation","synonyms":[{"name":"normal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"normal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001925"}


id: PR:O14135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.09","synonyms":[{"name":"Spom972h-set8","type":"exact"}],"termid":"PR:O14135"}


id: GO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in fruit ripening","synonyms":[{"name":"cell wall modification during ripening","type":"related"}],"termid":"GO:0009829"}


id: PBO:0082354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP sulfurylase; catalyzes the primary step of intracellular sulfate activation, essential for assimilatory reduction of sulfate to sulfide, involved in methionine metabolism; human homolog PAPSS2 complements yeast null mutant","termid":"PBO:0082354"}


id: PBO:0062550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily P member 1 pseudogene","termid":"PBO:0062550"}


id: PBO:0042535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 2","termid":"PBO:0042535"}


id: PBO:0057610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 943","termid":"PBO:0057610"}


id: FYPO:0007098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanadate ions (VO4(3-)).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on vanadate","synonyms":[{"name":"normal cell population growth in presence of vanadate","type":"exact"},{"name":"normal cell population growth on vanadate","type":"exact"},{"name":"normal cell population growth on vanadate ions","type":"exact"},{"name":"normal growth on orthovanadate","type":"exact"},{"name":"normal growth on vanadate(3-)","type":"exact"},{"name":"normal growth on vanadium oxoanion","type":"broad"},{"name":"normal vegetative cell population growth on vanadate","type":"exact"}],"termid":"FYPO:0007098"}


id: PBO:0055271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2698","termid":"PBO:0055271"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: PBO:0091336
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain appears to be incorrect (possibly Pab1 SPAC227.07c)","termid":"PBO:0091336"}


id: SO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Methylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylwyosine","secondary_identifiers":["RNAMOD:042"],"synonyms":[{"name":"mimG","type":"exact"}],"termid":"SO:0001337"}


id: PBO:0085101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein of unknown function; relocalizes to the cytosol in response to hypoxia; contains WD-40 domains; not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0085101"}


id: PBO:0044358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 45","termid":"PBO:0044358"}


id: PBO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 25","termid":"PBO:0048314"}


id: PBO:0061150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 2","termid":"PBO:0061150"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: PBO:0030024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_formation_in_absence_of_opposite_mating_type","termid":"PBO:0030024"}


id: GO:0016659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, a heme protein, NAD, NADP, a nitrogenous group, a quinone or similar compound or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NADH or NADPH, other acceptor (obsolete GO:0016659)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, other acceptor","type":"exact"}],"termid":"GO:0016659"}


id: PBO:0054143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1509","termid":"PBO:0054143"}


id: PR:O94290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component ist3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.05c","synonyms":[{"name":"RNA-binding protein cwf29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cwf29","type":"exact"},{"name":"complexed with cdc5 protein 29 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94290"}


id: GO:0061813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a ARID domain. The AT-rich interaction domain (ARID) is an ~100-amino acid DNA-binding module found in a large number of eukaryotic transcription factors.","definition_xrefs":["GOC:dph","PMID:18270511","InterPro:IPR001606"],"gene_count":0,"genotype_count":0,"name":"obsolete ARID domain binding (obsolete GO:0061813)","termid":"GO:0061813"}


id: PBO:0087155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA","termid":"PBO:0087155"}


id: GO:1904306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["GO_REF:0000058","PMID:10821044","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"positively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"activation of gastro-intestinal system smooth muscle contraction","type":"narrow"},{"name":"up regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"up-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"upregulation of gastro-intestinal system smooth muscle contraction","type":"exact"}],"termid":"GO:1904306"}


id: PBO:0031553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_peptidase_activity","termid":"PBO:0031553"}


id: GO:0090510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell division process where the division plane is perpendicular to the surface of the organ. It adds cells to the existing cell layer or cell file.","definition_xrefs":["PMID:21391814","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anticlinal cell division","termid":"GO:0090510"}


id: GO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"positive regulation of integrin biosynthetic process","termid":"GO:0045726"},{"relation_name":"positively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"activation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of beta 2 integrin anabolism","type":"exact"},{"name":"positive regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"positive regulation of beta 2 integrin formation","type":"exact"},{"name":"positive regulation of beta 2 integrin synthesis","type":"exact"},{"name":"stimulation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"up regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"up-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"upregulation of beta 2 integrin biosynthetic process","type":"exact"}],"termid":"GO:0045775"}


id: PBO:0070362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y5","termid":"PBO:0070362"}


id: GO:0140889
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105184],"is_not":false,"summary":null,"term":"GO:0140889"}]},"cv_name":"biological_process","definition":"The disruption of nucleosomes during DNA replication to allow the replication machinery to access the DNA.","definition_xrefs":["PMID:34471130","PMID:35308047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"DNA replication-dependent chromatin disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140889","terms_by_termid":{"GO:0140889":null}}


id: PBO:0053415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 353","termid":"PBO:0053415"}


id: PBO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and mu domain containing endocytic adaptor 2","termid":"PBO:0047452"}


id: PBO:0029990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pre-mRNA_level","termid":"PBO:0029990"}


id: GO:0016454
data:
  {"annotated_genes":["SJAG_02305","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88347,101323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"},{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016454","terms_by_termid":{"GO:0004758":null}}


id: PBO:0067056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 77, pseudogene","termid":"PBO:0067056"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: PBO:0071503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 6","termid":"PBO:0071503"}


id: GO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell projection organization","synonyms":[{"name":"down regulation of cell projection organization","type":"exact"},{"name":"down-regulation of cell projection organization","type":"exact"},{"name":"downregulation of cell projection organization","type":"exact"},{"name":"inhibition of cell projection organization","type":"narrow"},{"name":"negative regulation of cell projection organisation","type":"exact"},{"name":"negative regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031345"}


id: GO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"gas transport","termid":"GO:0015669"}


id: GO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:go_curators","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway","secondary_identifiers":["GO:0030179","Wikipedia:Notch_signaling_pathway"],"synonyms":[{"name":"N signaling pathway","type":"exact"},{"name":"N signalling pathway","type":"exact"},{"name":"Notch receptor signaling pathway","type":"exact"},{"name":"Notch receptor signalling pathway","type":"exact"},{"name":"Notch signalling pathway","type":"exact"},{"name":"Notch-receptor signaling pathway","type":"exact"},{"name":"Notch-receptor signalling pathway","type":"exact"}],"termid":"GO:0007219"}


id: PR:Q9UT31
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug130 gene.","definition_xrefs":["UniProtKB:Q9UT31","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 130 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.05c","synonyms":[{"name":"Spom972h-mug130","type":"exact"}],"termid":"PR:Q9UT31"}


id: PBO:0082714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the nonsense-mediated mRNA decay (NMD) pathway; along with Nam7p and Nmd2p; involved in decay of mRNA containing nonsense codons; involved in telomere maintenance","termid":"PBO:0082714"}


id: GO:0051053
data:
  {"annotated_genes":["SJAG_03097","SJAG_03997","SJAG_04855","SJAG_00247","SJAG_01210","SJAG_01916","SJAG_04671","SJAG_00573","SJAG_02162","SJAG_00266","SJAG_03048","SJAG_01378","SJAG_02724","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008156"},{"annotations":[98092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[104741,112858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[93431,98096,104742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[103812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[95394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032211"},{"annotations":[84240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905839"},{"annotations":[98974],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[102444,98001,104363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[95047,98975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[95048,98002,111000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"negatively_regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00266":null,"SJAG_00573":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_01378":null,"SJAG_01916":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA metabolic process","type":"exact"},{"name":"down-regulation of DNA metabolic process","type":"exact"},{"name":"downregulation of DNA metabolic process","type":"exact"},{"name":"inhibition of DNA metabolic process","type":"narrow"},{"name":"negative regulation of DNA metabolism","type":"exact"}],"termid":"GO:0051053","terms_by_termid":{"GO:0008156":null,"GO:0011000":null,"GO:0031582":null,"GO:0032211":null,"GO:0043111":null,"GO:0045128":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null,"GO:1904332":null,"GO:1905839":null,"GO:2001033":null}}


id: PBO:0027450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasma_membrane_morphology","termid":"PBO:0027450"}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: GO:0010024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochromobilin, which involves the oxidative cleavage of heme by a heme oxygenase(HO) to form biliverdin IX alpha.","definition_xrefs":["PMID:11402195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"phytochromobilin metabolic process","termid":"GO:0051202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0008150"],"is_obsolete":false,"name":"phytochromobilin biosynthetic process","synonyms":[{"name":"phytochromobilin anabolism","type":"exact"},{"name":"phytochromobilin biosynthesis","type":"exact"},{"name":"phytochromobilin formation","type":"exact"},{"name":"phytochromobilin synthesis","type":"exact"}],"termid":"GO:0010024"}


id: PBO:0076951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1 induced transcript 1","termid":"PBO:0076951"}


id: FYPO:0004461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of sexual differentiation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Sexual differentiation RNAs are transcribed from genes whose products are involved in sexual differentiation, i.e. mating and sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of regulation of sexual differentiation gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased level of sexual differentiation regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased regulation of sexual differentiation gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of sexual differentiation gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004461"}


id: FYPO:0003199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to glucose starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level during cellular response to glucose starvation","synonyms":[{"name":"abnormal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"altered RNA level during cellular response to glucose depletion","type":"exact"},{"name":"altered RNA level during cellular response to glucose deprivation","type":"exact"},{"name":"altered RNA level during cellular response to glucose limitation","type":"related"},{"name":"altered RNA level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during glucose starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to glucose starvation","type":"exact"},{"name":"altered transcript level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003199"}


id: GO:1905135
data:
  {"annotated_genes":["SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87562],"is_not":false,"summary":null,"term":"GO:1905135"}]},"cv_name":"biological_process","definition":"The directed movement of biotin from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin transport","termid":"GO:0015878"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"biotin import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044756","GO:1901689"],"synonyms":[{"name":"biotin import","type":"related"},{"name":"biotin import into cell","type":"exact"}],"termid":"GO:1905135","terms_by_termid":{"GO:1905135":null}}


id: PBO:0052173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 4","termid":"PBO:0052173"}


id: PBO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-36 (pseudogene)","termid":"PBO:0051335"}


id: GO:1990484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate (2-hydroxypropanoic acid) in the presence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:8941775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate catabolic process","termid":"GO:1903457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"aerobic lactate catabolic process","synonyms":[{"name":"aerobic lactic acid catabolic process","type":"related"}],"termid":"GO:1990484"}


id: PBO:0069556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 828, pseudogene","termid":"PBO:0069556"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: PR:000027533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q09838-1, MOD:00696.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/PhosRes+","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"Spom-prz1/iso:1/Phos:1","type":"exact"},{"name":"prz1/PhosRes+","type":"exact"}],"termid":"PR:000027533"}


id: PBO:0064032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 66","termid":"PBO:0064032"}


id: GO:0097639
data:
  {"annotated_genes":["SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96058],"is_not":false,"summary":null,"term":"GO:0097639"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-lysine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903410"],"synonyms":[{"name":"L-lysine import into cell","type":"exact"}],"termid":"GO:0097639","terms_by_termid":{"GO:0097639":null}}


id: GO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate biosynthetic process","termid":"GO:0046180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"keto-D-gluconate biosynthetic process","synonyms":[{"name":"keto-D-gluconate anabolism","type":"exact"},{"name":"keto-D-gluconate biosynthesis","type":"exact"},{"name":"keto-D-gluconate formation","type":"exact"},{"name":"keto-D-gluconate synthesis","type":"exact"}],"termid":"GO:0046179"}


id: GO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysophosphatidic acid + H2O = phosphate + monoacylglycerol.","definition_xrefs":["PMID:7966317","PMID:20045079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"lysophosphatidic acid phosphatase activity","secondary_identifiers":["MetaCyc:RXNQT-4375","Reactome:R-HSA-8878654","RHEA:33155","EC:3.1.3.106"],"synonyms":[{"name":"1-acyl-sn-glycerol 3-phosphatase activity","type":"exact"},{"name":"2-lysophosphatidate phosphatase activity","type":"exact"},{"name":"LPA phosphatase activity","type":"exact"},{"name":"lysophosphatidate phosphatase activity","type":"exact"}],"termid":"GO:0052642"}


id: PBO:0065237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 5","termid":"PBO:0065237"}


id: PBO:0041383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 22","termid":"PBO:0041383"}


id: PBO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor Whi5 (predicted)","termid":"PBO:0003103"}


id: PR:Q10366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 4-kinase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10048:SF22","PRO:DNx","OMA:SCHPO02103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase pik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.16c","secondary_identifiers":["UniProtKB:Q10366"],"synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PI4KB","type":"exact"}],"termid":"PR:Q10366"}


id: FYPO:0002397
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_04703","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","rga4delta","for3delta"],"synonyms":[{"name":"abnormal cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0002397","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: RO:HOM0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.","definition_xrefs":["DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syngeny_relationship_with","synonyms":[{"name":"generative homology","type":"exact"},{"name":"syngenous to","type":"exact"}],"termid":"RO:HOM0000058"}


id: GO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh","PMID:7520444","PMID:18787413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stem cell factor","termid":"GO:0036215"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to stem cell factor stimulus","synonyms":[{"name":"cellular response to KIT ligand","type":"exact"},{"name":"cellular response to KITLG","type":"exact"},{"name":"cellular response to SCF","type":"exact"},{"name":"cellular response to hematopoietic growth factor KL","type":"exact"}],"termid":"GO:0036216"}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995","PMID:2088182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: PBO:0091723
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDK1","termid":"PBO:0091723"}


id: GO:1904555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-proline across a membrane.","definition_xrefs":["GOC:kmv","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transport","termid":"GO:0015824"},{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-proline transmembrane transport","termid":"GO:1904555"}


id: PBO:0072887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 2","termid":"PBO:0072887"}


id: GO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylation (obsolete GO:0031063)","termid":"GO:0031063"}


id: GO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process observed in bacteria and filamentous fungi and leading to spontaneous death by lysis. Examples are lysis of the mother cell during sporulation of Bacillus subtilis and self-degradation of fungal cells in Aspergillus nidulans. Autolysis is also involved in bacterial biofilm formation.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","PMID:10974124","PMID:19286987","PMID:26811896","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autolysis","secondary_identifiers":["Wikipedia:Autolysis"],"termid":"GO:0001896"}


id: PBO:0040109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1","termid":"PBO:0040109"}


id: PBO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single-stranded DNA binding protein Rim1","termid":"PBO:0002293"}


id: MOD:01029
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a succinyl group linked through a carbonyl carbon.","definition_xrefs":["DeltaMass:0","Unimod:64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01029"}


id: GO:0005366
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88085,93710],"is_not":false,"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + H+(out) = myo-inositol(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"myo-inositol:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429101","RHEA:60364"],"synonyms":[{"name":"hydrogen/myo-inositol transporter activity","type":"broad"},{"name":"myo-inositol:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005366","terms_by_termid":{"GO:0005366":null}}


id: GO:0033740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: hydroxylamine + NH3 = hydrazine + H2O, and hydrazine + acceptor = N2 + reduced acceptor.","definition_xrefs":["EC:1.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxylamine oxidoreductase activity","secondary_identifiers":["MetaCyc:1.7.99.8-RXN","RHEA:23232"],"synonyms":[{"name":"hydroxylamine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0033740"}


id: FYPO:0005591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylcholine level","synonyms":[{"name":"decreased cellular lysophosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysophosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylcholine level","type":"exact"}],"termid":"FYPO:0005591"}


id: SO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that falls in the polypyrimidine tract at 3' end of intron between 17 and 3 bases from the end (acceptor -3 to acceptor -17).","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_polypyrimidine_tract_variant","synonyms":[{"name":"splice polypyrimidine tract variant","type":"exact"}],"termid":"SO:0002169"}


id: PBO:0091717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis19/Eic1","termid":"PBO:0091717"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: GO:0008062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The timing of the emergence of the adult fly from its pupal case, which usually occurs at dawn.","definition_xrefs":["PMID:11715043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eclosion rhythm","termid":"GO:0008062"}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["EC:1.14.12.14","RHEA:23468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05156","MetaCyc:2ASDOSALCAL-RXN","GO:0018605","UM-BBD_reactionID:r0218"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: PBO:0089952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein","termid":"PBO:0089952"}


id: GO:0035007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the rate, extent or location of the melanization defense response during injury or invasion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of melanization defense response","synonyms":[{"name":"regulation of melanization defence response","type":"exact"}],"termid":"GO:0035007"}


id: GO:2000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of metanephric podocyte development","termid":"GO:2000477"},{"relation_name":"positively_regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric podocyte development","synonyms":[{"name":"positive regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000478"}


id: GO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to and maintained in the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"posterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"posterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060814"}


id: PBO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex beta subunit","termid":"PBO:0002723"}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: GO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding (obsolete GO:0001132)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"TRF protein binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0001132"}


id: PBO:0025464
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this protein is shorter than the S. cerevisiae ortholog and missing the enoyl-CoA hydratase domain. Other genes for fatty acid beta-oxidation are also absent","termid":"PBO:0025464"}


id: GO:0102615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + NADPH + O2 + H+ = 2alpha-hydroxy-ent-cassadiene + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-cassadiene-C2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15462","RHEA:55484"],"termid":"GO:0102615"}


id: GO:0110091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"negatively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hippocampal neuron apoptotic process","termid":"GO:0110091"}


id: GO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"}


id: PBO:0028201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028201"}


id: PATO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polar polarity","termid":"PATO:0002187"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: GO:1902633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["PMID:22562153","GOC:di","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633"}


id: PBO:0055207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2632","termid":"PBO:0055207"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_00854","SJAG_04056","SJAG_04818","SJAG_01830","SJAG_03805","SJAG_04321","SJAG_01218","SJAG_03886","SJAG_05014","SJAG_00226","SJAG_01252","SJAG_04360","SJAG_05276","SJAG_01521","SJAG_00939","SJAG_01720","SJAG_00507","SJAG_04084","SJAG_03276","SJAG_01818","SJAG_04153","SJAG_03223","SJAG_04118","SJAG_04824","SJAG_03179","SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85263,85368,85787,87005,95453,100532,101690,103967,104033,109533,111352],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[101037,104674,88635,112150,96955,85262,100174,103280,111881,97807,87004,113223,102272,84202,91540,114292,92898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_00939":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01720":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03276":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nonsense-mediated_mRNA_decay","Wikipedia:Nonsense-mediated_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: PBO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt1","termid":"PBO:0005745"}


id: PBO:0057287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 507","termid":"PBO:0057287"}


id: GO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in parturition","termid":"GO:0060137"}


id: GO:2000190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:2000190)","synonyms":[{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:2000190"}


id: FYPO:0003160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during stationary phase","synonyms":[{"name":"long cell during stationary phase","type":"exact"}],"termid":"FYPO:0003160"}


id: GO:0052658
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104145],"is_not":false,"summary":null,"term":"GO:0052658"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + H2O = 1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.56","RHEA:19797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855174","MetaCyc:3.1.3.56-RXN","Reactome:R-HSA-1855222","KEGG_REACTION:R03394"],"synonyms":[{"name":"1D-myo-inositol-1,4,5-trisphosphate 5-phosphohydrolase activity","type":"related"},{"name":"5PTase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-triphosphate 5-phosphatase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-trisphosphate 5-phosphatase activity","type":"related"},{"name":"D-myo-inositol(1,4,5)-trisphosphate 5-phosphatase activity","type":"related"},{"name":"Ins(1,4,5)P3 5-phosphatase activity","type":"related"},{"name":"InsP(3) 5-phosphatase activity","type":"broad"},{"name":"InsP3 5-phosphatase activity","type":"broad"},{"name":"L-myo-inositol 1,4,5-trisphosphate-monoesterase activity","type":"broad"},{"name":"inosine triphosphatase activity","type":"related"},{"name":"inositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"inositol phosphate 5-phosphomonoesterase activity","type":"broad"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"broad"},{"name":"inositol triphosphate 5-phosphomonoesterase activity","type":"broad"},{"name":"inositol trisphosphate phosphomonoesterase activity","type":"broad"},{"name":"myo-inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"related"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"}],"termid":"GO:0052658","terms_by_termid":{"GO:0052658":null}}


id: SO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that derives from another organism, via the use of recombinant DNA technology.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_insertion","synonyms":[{"name":"transgenic insertion","type":"exact"}],"termid":"SO:0001218"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: RO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","termid":"RO:0002338"}


id: FYPO:0006364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which meiotic spindle microtubules become disconnected from the spindle pole body during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiosis I","termid":"FYPO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000121","FYPO:0000120"],"is_obsolete":false,"name":"spindle microtubules detached from spindle pole body during meiosis I","synonyms":[{"name":"meiotic spindle microtubules detached from spindle pole body during meiosis I","type":"exact"},{"name":"non-polar spindle during meiosis I","type":"related"},{"name":"spindle microtubules detached from SPB during meiosis I","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"spindle pole body detached from spindle microtubules during meiosis I","type":"exact"}],"termid":"FYPO:0006364"}


id: GO:0061608
data:
  {"annotated_genes":["SJAG_03959","SJAG_02998","SJAG_01909","SJAG_00968","SJAG_02425","SJAG_01534","SJAG_00586","SJAG_01083","SJAG_03693","SJAG_01789","SJAG_03470","SJAG_03662","SJAG_00840","SJAG_04411"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84895,87420,88972,89030,91386,92144,98283,99136,99436,102747,110433,111822,113259,114697],"is_not":false,"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear import signal (NIS) on a cargo to be transported, to mediate transport of the cargo through the nuclear pore, from the cytoplasm to the nuclear lumen. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:vw","PMID:28713609","GOC:pg","Wikipedia:Nuclear_transport","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140142"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674","GO:0140142"],"is_obsolete":false,"name":"nuclear import signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"importin activity","type":"related"}],"termid":"GO:0061608","terms_by_termid":{"GO:0061608":null}}


id: PBO:0012039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like (predicted)","termid":"PBO:0012039"}


id: PBO:0058668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6796","termid":"PBO:0058668"}


id: GO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte development","termid":"GO:0048599"}


id: GO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisted of eight polypeptides. This complex catalyzes the formation of methyl-coenzyme M and H4MPT from N5-methyl-H4MPT and CoM during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8477726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex","synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethane sulfonate 2-methyltransferase complex","type":"exact"},{"name":"N5-methyltetrahydromethanopterin-coenzyme M methyltransferase complex","type":"exact"},{"name":"coenzyme M methyltransferase complex","type":"broad"},{"name":"methyl-H4MPT","type":"broad"}],"termid":"GO:0044677"}


id: PBO:0080523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 5, pseudogene","termid":"PBO:0080523"}


id: PBO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 3","termid":"PBO:0047459"}


id: PBO:0038838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: GO:1901378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic heteropentacyclic compound biosynthetic process","synonyms":[{"name":"organic heteropentacyclic compound anabolism","type":"exact"},{"name":"organic heteropentacyclic compound biosynthesis","type":"exact"},{"name":"organic heteropentacyclic compound formation","type":"exact"},{"name":"organic heteropentacyclic compound synthesis","type":"exact"}],"termid":"GO:1901378"}


id: GO:0071728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the beak over time from its initial formation until its mature state. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["GOC:lp","ISBN:0702008729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak development","termid":"GO:0071728"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: GO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone.","definition_xrefs":["EC:1.1.1.149","MetaCyc:1.1.1.149-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity","synonyms":[{"name":"20alpha-HSD","type":"related"},{"name":"20alpha-HSDH","type":"related"},{"name":"20alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"20alpha-hydroxysteroid:NAD(P)+ 20-oxidoreductase activity","type":"broad"}],"termid":"GO:0047006"}


id: PBO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family mismatch-repair protein Pms1","termid":"PBO:0002331"}


id: PBO:0051988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 1","termid":"PBO:0051988"}


id: GO:0046316
data:
  {"annotated_genes":["SJAG_00633"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93856],"is_not":false,"summary":null,"term":"GO:0046316"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + ATP = 6-phospho-D-gluconate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.12","RHEA:19433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"gluconokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCONOKIN-RXN","KEGG_REACTION:R01737"],"synonyms":[{"name":"ATP:D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"gluconate kinase activity","type":"related"},{"name":"gluconokinase (phosphorylating)","type":"related"}],"termid":"GO:0046316","terms_by_termid":{"GO:0046316":null}}


id: GO:0050572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-idonate + NAD(P)+ = 5-dehydrogluconate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:1.1.1.264-RXN","EC:1.1.1.264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-idonate 5-dehydrogenase activity","synonyms":[{"name":"L-idonate:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050572"}


id: PBO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin 1","termid":"PBO:0047726"}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: SO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_two","secondary_identifiers":["BS:00204"],"synonyms":[{"name":"asx turn left handed type two","type":"exact"},{"name":"asx_turn_iil","type":"exact"}],"termid":"SO:0001130"}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tyrosine","termid":"PBO:0035761"}


id: PBO:0075197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 9","termid":"PBO:0075197"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["PubMed:2345152","RESID:AA0393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: PBO:0083504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ARG81/YML099C","termid":"PBO:0083504"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: PBO:0043018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 2","termid":"PBO:0043018"}


id: PR:Q92356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-associated membrane protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptobrevin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.11","secondary_identifiers":["UniProtKB:Q92356"],"synonyms":[{"name":"Spom972h-VAMP4","type":"exact"}],"termid":"PR:Q92356"}


id: GO:0014856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of skeletal muscle cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:ef","CL:0000188","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle cell proliferation","termid":"GO:0014856"}


id: PBO:0048508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 9","termid":"PBO:0048508"}


id: PBO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase (predicted)","termid":"PBO:0004167"}


id: GO:1990396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The error-free repair of a single-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.","definition_xrefs":["PMID:24339919","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"},{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"error-free postreplication DNA repair","termid":"GO:0042275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}


id: PBO:0048057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 6","termid":"PBO:0048057"}


id: FYPO:0001937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0002114","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"}


id: PBO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, involved in translation initiation Psi1","termid":"PBO:0005792"}


id: PBO:0071008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 10","termid":"PBO:0071008"}


id: PBO:0057099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR193b-365a host gene","termid":"PBO:0057099"}


id: PBO:0085611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA mismatch repair and meiotic recombination; involved in crossing-over during meiotic recombination; forms a complex with Mlh1p; mammalian homolog is implicated mammalian microsatellite instability","termid":"PBO:0085611"}


id: GO:0032798
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103491,106162],"is_not":false,"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A conserved DNA recombinase mediator complex that contains two Swi5 monomers and one Sfr1 monomer in Schizosaccharomyces, or orthologs thereof (e.g. Sae3p and Mei5p in Saccharomyces).","definition_xrefs":["PMID:16921379","PMID:15620352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Swi5-Sfr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sae3-Mei5 complex","type":"exact"},{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0032798","terms_by_termid":{"GO:0032798":null}}


id: PBO:0082453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-3 sterol dehydrogenase; catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; human homolog NSDHL implicated in CK syndrome, and can complement yeast null mutant; molecular target of natural product and antifungal compound FR171456","termid":"PBO:0082453"}


id: PBO:0042988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 1","termid":"PBO:0042988"}


id: PBO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 2","termid":"PBO:0080140"}


id: PBO:0039239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated leukocyte cell adhesion molecule","termid":"PBO:0039239"}


id: PBO:0046000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX antisense RNA 1","termid":"PBO:0046000"}


id: PBO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_slow_rereplication","termid":"PBO:0030271"}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: PBO:0085525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S26, no bacterial homolog; RPS26A has a paralog, RPS26B, that arose from the whole genome duplication; human homolog can partially complement an RPS26A, RPS26B double null mutant; mutations in the human gene are associated with Diamond-Blackfan anemia","termid":"PBO:0085525"}


id: PBO:0062071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 2 pseudogene","termid":"PBO:0062071"}


id: GO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-10 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-10 receptor binding","synonyms":[{"name":"IL-10","type":"narrow"},{"name":"interleukin-10 receptor ligand","type":"narrow"}],"termid":"GO:0005141"}


id: PR:G2TRU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc2 gene.","definition_xrefs":["UniProtKB:G2TRU5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX assembly mitochondrial protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.20","synonyms":[{"name":"Cx9C motif-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmc2","type":"exact"}],"termid":"PR:G2TRU5"}


id: PBO:0013770
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of loss of CAMP-dependent protein Kinase","termid":"PBO:0013770"}


id: PBO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 16","termid":"PBO:0070961"}


id: GO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.50","MetaCyc:1.1.1.50-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androsterone dehydrogenase activity","termid":"GO:0047023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"androsterone dehydrogenase (B-specific) activity","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(B-specific)","MetaCyc:1.1.1.209-RXN"],"synonyms":[{"name":"3-alpha-HSD activity","type":"related"},{"name":"3-alpha-hydroxysteroid dehydrogenase (B-specific) activity","type":"broad"},{"name":"3alpha-HSD","type":"related"},{"name":"3alpha-hydroxysteroid dehydrogenase (B-specific)","type":"broad"},{"name":"3alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (B-specific)","type":"broad"},{"name":"hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"sterognost 3alpha","type":"related"}],"termid":"GO:0047042"}


id: GO:0051680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose biosynthetic process","synonyms":[{"name":"isopanose biosynthesis","type":"exact"},{"name":"isopanose biosynthetic process","type":"exact"}],"termid":"GO:0051680"}


id: PBO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 1","termid":"PBO:0051525"}


id: PBO:0088307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec63","termid":"PBO:0088307"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: PBO:0058426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4796","termid":"PBO:0058426"}


id: GO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"protein localization to membrane raft","termid":"GO:1903044"},{"relation_name":"part_of","term_name":"membrane raft organization","termid":"GO:0031579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane raft","synonyms":[{"name":"establishment of protein localization to membrane raft","type":"broad"}],"termid":"GO:0071210"}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04354","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87466,109032],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinamide + ATP = ADP + 2 H+ + nicotinamide mononucleotide.","definition_xrefs":["RHEA:14017","EC:2.7.1.22","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04354":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869627","KEGG_REACTION:R02324","GO:0000816","Reactome:R-HSA-8869633"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: FYPO:0002963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is abnormal. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:23980030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to nuclear exosome focus","synonyms":[{"name":"abnormal protein localisation to nuclear exosome focus","type":"exact"},{"name":"abnormal protein localization to MMi1 focus","type":"exact"},{"name":"abnormal protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"abnormal protein localization to nuclear exosome foci","type":"exact"},{"name":"abnormal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002963"}


id: GO:0140317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a substance across the outer membrane in cells with two membranes.","definition_xrefs":["PMID:15968039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"export across cell outer membrane","termid":"GO:0140317"}


id: MOD:00190
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to dehydrobutyrine.","definition_xrefs":["Unimod:23#T","OMSSA:164","RESID:AA0182","OMSSA:141","OMSSA:97","PubMed:3769923","DeltaMass:0","PubMed:1547888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","termid":"MOD:00416"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"Dhb(Thr)","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:00190"}


id: FYPO:0000496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal mitochondrial transport","termid":"FYPO:0000495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrial transport","synonyms":[{"name":"decreased mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: decreased","type":"related"},{"name":"reduced mitochondrial transport","type":"exact"}],"termid":"FYPO:0000496"}


id: PBO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death domain containing 1","termid":"PBO:0045518"}


id: PBO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Srb9","termid":"PBO:0003293"}


id: PBO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 1","termid":"PBO:0043003"}


id: PR:Q9HE15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.04c gene.","definition_xrefs":["UniProtKB:Q9HE15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.04c","synonyms":[{"name":"Spom972h-SPAC1399.04c","type":"exact"},{"name":"UMP pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE15"}


id: PATO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a remnant structure from earlier development or evolution.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial","termid":"PATO:0000588"}


id: GO:0048036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the central complex over time, from its formation to the mature structure. The central complex region of the insect brain is thought to be crucial for control of locomotive behavior. Located in the middle of the two protocerebral hemispheres, it comprises four neuropilar regions, the fan-shaped body, the ellipsoid body, the protocerebral bridge and the paired noduli.","definition_xrefs":["PMID:12490252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central complex development","synonyms":[{"name":"central body development","type":"exact"}],"termid":"GO:0048036"}


id: PBO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0036106"}


id: PBO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0035823"}


id: PBO:0080327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 91 pseudogene","termid":"PBO:0080327"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: PBO:0042192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2 pseudogene 1","termid":"PBO:0042192"}


id: GO:0180040
data:
  {"annotated_genes":["SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102953],"is_not":false,"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a pheromone response MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of pheromone response MAPK cascade","termid":"GO:0180039"},{"relation_name":"negatively_regulates","term_name":"pheromone response MAPK cascade","termid":"GO:0071507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180040","terms_by_termid":{"GO:0180040":null}}


id: PBO:0074779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 1","termid":"PBO:0074779"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01822","PANTHER:PTHR10013:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: GO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"negatively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage antigen processing and presentation","synonyms":[{"name":"down regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"down-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"downregulation of macrophage antigen processing and presentation","type":"exact"},{"name":"inhibition of macrophage antigen processing and presentation","type":"narrow"}],"termid":"GO:0002617"}


id: SO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_artifact","termid":"SO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication_artifact","synonyms":[{"name":"duplication artifact","type":"exact"}],"termid":"SO:0002177"}


id: PBO:0073428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 3","termid":"PBO:0073428"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["loinc:LA6687-3","SO:1000034"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: PBO:0031082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype","termid":"PBO:0031082"}


id: GO:0060617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the formation of a mammary placode through a mechanism that mediates the transfer of information from a mesenchymal cell to an epithelial cell resulting in the epithelial cell adopting the identity of a cell of the mammary placode.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"positively_regulates","term_name":"mammary placode formation","termid":"GO:0060596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of mammary placode formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of mammary placode formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060617"}


id: PBO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 21","termid":"PBO:0048070"}


id: PR:Q9P7C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX46 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing ATP-dependent RNA helicase prp11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.01","secondary_identifiers":["UniProtKB:Q9P7C7"],"synonyms":[{"name":"Spom972h-DDX46","type":"exact"}],"termid":"PR:Q9P7C7"}


id: MOD:01518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01518"}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: FYPO:0003045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC1R boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC1R","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC1R during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC1R during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC1R","type":"exact"}],"termid":"FYPO:0003045"}


id: GO:0140652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyripyropene A.","definition_xrefs":["PMID:21224862","GOC:ach","PMID:26019565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pyripyropene A biosynthetic process","synonyms":[{"name":"pyripyropene A synthesis","type":"exact"},{"name":"pyripyropene A anabolism","type":"exact"},{"name":"pyripyropene A biosynthesis","type":"exact"},{"name":"pyripyropene A formation","type":"exact"}],"termid":"GO:0140652"}


id: PATO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electrical_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electrical conductivity","termid":"PATO:0001757"}


id: GO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X-C chemokine; C-X-C chemokines have a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-X-C chemokine binding","termid":"GO:0019958"}


id: PBO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T5orf172 family protein","termid":"PBO:0001753"}


id: PBO:0067896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 198","termid":"PBO:0067896"}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:dgf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: PBO:0062659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 9","termid":"PBO:0062659"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: GO:0070822
data:
  {"annotated_genes":["SJAG_02846","SJAG_03230","SJAG_03255","SJAG_02981","SJAG_02439","SJAG_03884","SJAG_00868","SJAG_01804","SJAG_01230","SJAG_00441","SJAG_04758","SJAG_00349","SJAG_01110","SJAG_03441","SJAG_00581","SJAG_04576"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100491,100793,102559,90418,106344,90234,99617,84566,105325,91068,110199,98514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[89363,89890,85258,91070,91507,105327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"Any of a number of evolutionarily conserved histone deacetylase complexes (HDACs) containing a core consisting of a paired amphipathic helix motif protein (e.g. Sin3p in S. cerevisiae, Pst1 in S. pombe or Sin3A in mammals) at least one class I histone deacetylase (e.g. Rpd3p in S. cerevisiae, Clr6 in S. pombe, or HDAC1 and HDAC2 in mammals), and at least one WD40 repeat protein (e.g. Ume1p in S. cerevisiae, Prw1 in S. pombe, or RbAp46 and RbAp48 in mammals). These complexes also contain a variable number of other proteins that direct histone binding, DNA binding, or add other functionality to the complex.","definition_xrefs":["PMID:15565322","PMID:18292778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01804":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03884":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"Sin3-type complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070822","terms_by_termid":{"GO:0032221":null,"GO:0033698":null}}


