# terms

id: PATO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tonicity which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased tonicity","synonyms":[{"name":"high tonicity","type":"exact"}],"termid":"PATO:0001618"}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: PBO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_during","termid":"PBO:0034106"}


id: SO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs downstream of the transcript termination site.","direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_transcript_variant","synonyms":[{"name":"downstream transcript variant","type":"exact"}],"termid":"SO:0001987"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: PBO:0053015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 2","termid":"PBO:0053015"}


id: PBO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2B, pseudogene","termid":"PBO:0046175"}


id: PR:Q9UT67
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.04c","synonyms":[{"name":"IPC mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt2","type":"exact"}],"termid":"PR:Q9UT67"}


id: GO:0034315
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034315","terms_by_termid":{"GO:0034316":null}}


id: GO:0032060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["Wikipedia:Bleb_(cell_biology)","GOC:mah","GOC:mtg_apoptosis","PMID:16624291","PMID:12083798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"bleb assembly","synonyms":[{"name":"blebbing","type":"broad"},{"name":"cell blebbing","type":"exact"},{"name":"membrane blebbing","type":"broad"},{"name":"plasma membrane bleb assembly","type":"exact"},{"name":"plasma membrane blebbing","type":"exact"}],"termid":"GO:0032060"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: PBO:0063229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 12","termid":"PBO:0063229"}


id: GO:0090143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleoid organization","synonyms":[{"name":"nucleoid organisation","type":"exact"}],"termid":"GO:0090143"}


id: PBO:0041855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3","termid":"PBO:0041855"}


id: GO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper sensitivity/resistance (obsolete GO:0045139)","synonyms":[{"name":"copper sensitivity/resistance","type":"exact"}],"termid":"GO:0045139"}


id: GO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA processing","synonyms":[{"name":"down regulation of mRNA processing","type":"exact"},{"name":"down-regulation of mRNA processing","type":"exact"},{"name":"downregulation of mRNA processing","type":"exact"},{"name":"inhibition of mRNA processing","type":"narrow"}],"termid":"GO:0050686"}


id: PBO:0029812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_organization_during_mitosis","termid":"PBO:0029812"}


id: GO:1900322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"negatively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltotetraose transport","synonyms":[{"name":"down regulation of maltotetraose transport","type":"exact"},{"name":"down-regulation of maltotetraose transport","type":"exact"},{"name":"downregulation of maltotetraose transport","type":"exact"},{"name":"inhibition of maltotetraose transport","type":"narrow"}],"termid":"GO:1900322"}


id: GO:0072711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyurea stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to inorganic substance","termid":"GO:0071241"},{"relation_name":"is_a","term_name":"response to hydroxyurea","termid":"GO:0072710"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydroxyurea","synonyms":[{"name":"cellular response to HU","type":"exact"}],"termid":"GO:0072711"}


id: FYPO:0002862
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[115299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah","GO:0016049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abnormal cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYPO:0002862","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: SOFP:symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Community symbol","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"SOFP:symbol"}


id: PBO:0071958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 8","termid":"PBO:0071958"}


id: PBO:0051383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda locus","termid":"PBO:0051383"}


id: PBO:0088911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor, Tea1-interacting protein implicated in exocytosis","termid":"PBO:0088911"}


id: PBO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 36 (pseudogene)","termid":"PBO:0045624"}


id: PBO:0080993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB24 divergent transcript","termid":"PBO:0080993"}


id: PBO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 3","termid":"PBO:0050457"}


id: GO:0110095
data:
  {"annotated_genes":["SJAG_02960","SJAG_05256","SJAG_02010","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108649],"is_not":false,"summary":null,"term":"GO:0110095"},{"annotations":[100812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[99236,91160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of an aldehyde. These may include transport of aldehydes away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw","PMID:25656103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of aldehyde","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110095","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: GO:0031172
data:
  {"annotated_genes":["SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89696],"is_not":false,"summary":null,"term":"GO:0031172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + O2 + H+ = N5-hydroxy-L-ornithine + H2O.","definition_xrefs":["PMID:12828635","MetaCyc:RXN-11128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ornithine N5-monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:41508"],"synonyms":[{"name":"L-ornithine 5-monooxygenase activity","type":"exact"}],"termid":"GO:0031172","terms_by_termid":{"GO:0031172":null}}


id: PBO:0027525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027525"}


id: GO:0060627
data:
  {"annotated_genes":["SJAG_01166","SJAG_04666","SJAG_01519","SJAG_00028","SJAG_00649","SJAG_00514","SJAG_04343","SJAG_03631","SJAG_03754","SJAG_03987","SJAG_00430","SJAG_03763","SJAG_01373","SJAG_02684","SJAG_03268","SJAG_04465","SJAG_00661","SJAG_03581","SJAG_03970","SJAG_04509","SJAG_04052","SJAG_00402","SJAG_02366","SJAG_03338","SJAG_03374","SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83337,91556],"is_not":false,"summary":null,"term":"GO:0060627"},{"annotations":[105279,84691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001136"},{"annotations":[90173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[83525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[95864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[114845,106893,107560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[83332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[87937,98673,85336,88224,113741,109180,86450,109313,87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[107539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[89431,96677,83335,96562,87778,94076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[109581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00402":null,"SJAG_00430":null,"SJAG_00514":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_01166":null,"SJAG_01373":null,"SJAG_01519":null,"SJAG_02366":null,"SJAG_02419":null,"SJAG_02684":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03374":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03970":null,"SJAG_03987":null,"SJAG_04052":null,"SJAG_04343":null,"SJAG_04465":null,"SJAG_04509":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060627","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0042997":null,"GO:0045806":null,"GO:0045921":null,"GO:0060627":null,"GO:0060628":null,"GO:2000156":null,"GO:2000369":null,"GO:2001135":null,"GO:2001136":null}}


id: PBO:0077072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte nuclear protein 1","termid":"PBO:0077072"}


id: FYPO:0001543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphorus-containing substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphorus level","synonyms":[{"name":"normal cellular level of phosphorus-containing substance","type":"exact"},{"name":"normal cellular phosphorus accumulation","type":"related"},{"name":"normal cellular phosphorus level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphorus level during vegetative growth","type":"exact"}],"termid":"FYPO:0001543"}


id: GO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(6)-glutaryl-L-lysyl-[protein] + NAD+ = 2''-O-glutaryl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["GOC:dph","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"protein-glutaryllysine deglutarylase activity","secondary_identifiers":["RHEA:47664"],"termid":"GO:0061697"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL1 intronic transcript 1","termid":"PBO:0052419"}


id: PBO:0040596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 1","termid":"PBO:0040596"}


id: PBO:0086269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein translocase and chaperone required for Complex III assembly; member of the AAA ATPase family; forms a homo-oligomeric complex in the mitochondrial inner membrane that translocates the C-terminal domain of Rip1p from the matrix across the inner membrane and delivers it to an assembly intermediate of respiratory Complex III; also required for assembly of the Qcr10p subunit; mutation is functionally complemented by human homolog BCS1L, linked to neonatal diseases","termid":"PBO:0086269"}


id: FYPO:0003012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells attempt to undergo mitosis before they have begun to replicate genomic DNA.","definition_xrefs":["PMID:11988741","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitosis","termid":"FYPO:0001046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"mitosis with unreplicated DNA","termid":"FYPO:0003012"}


id: PBO:0051792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCH antisense RNA 1","termid":"PBO:0051792"}


id: PBO:0029095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine_synthase_activity","termid":"PBO:0029095"}


id: PBO:0077165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 6, subcortical maternal complex member","termid":"PBO:0077165"}


id: GO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIa cytochrome c (obsolete GO:0009470)","synonyms":[{"name":"class IIa cytochrome c","type":"exact"}],"termid":"GO:0009470"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["RESID:AA0543","PubMed:9461080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: GO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"bile acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-433089","Reactome:R-HSA-194121","Reactome:R-HSA-194187"],"synonyms":[{"name":"sodium/bile acid symporter activity","type":"exact"}],"termid":"GO:0008508"}


id: PBO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 2","termid":"PBO:0047683"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:mah","GOC:pde","GOC:add","PMID:1931959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: GO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including alanine, via ornithine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"arginine catabolic process to alanine via ornithine","synonyms":[{"name":"arginine breakdown to alanine via ornithine","type":"exact"},{"name":"arginine degradation to alanine via ornithine","type":"exact"}],"termid":"GO:0010122"}


id: PBO:0065108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C beta","termid":"PBO:0065108"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: GO:1904856
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasmic membrane-bounded vesicle lumen that is part of a cytolytic granule.","definition_xrefs":["PMID:17272266","GOC:TermGenie","PMID:21247065","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule lumen","synonyms":[{"name":"cytolytic granule cytoplasmic membrane-bounded vesicle lumen","type":"exact"},{"name":"cytoplasmic membrane-bounded vesicle lumen of cytolytic granule","type":"exact"},{"name":"cytoplasmic membrane-enclosed vesicle lumen of cytolytic granule","type":"exact"}],"termid":"GO:1904856"}


id: PBO:0052684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 52","termid":"PBO:0052684"}


id: GO:0016153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-imidazolone-5-propanoate + H+ = trans-urocanate + H2O.","definition_xrefs":["RHEA:13101","EC:4.2.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"urocanate hydratase activity","secondary_identifiers":["Reactome:R-HSA-70903","KEGG_REACTION:R02914","MetaCyc:UROCANATE-HYDRATASE-RXN"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming)","type":"related"},{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase activity","type":"related"},{"name":"imidazolonepropionate hydrolase activity","type":"related"},{"name":"urocanase activity","type":"related"}],"termid":"GO:0016153"}


id: PBO:0060756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4","termid":"PBO:0060756"}


id: MOD:00657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamate 5-methyl ester.","definition_xrefs":["PubMed:6300110","RESID:AA0072#GLN","Unimod:528","PubMed:16888"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"methylated glutamine","termid":"MOD:00659"},{"relation_name":"is_a","term_name":"deamidated and methyl esterified residue","termid":"MOD:01369"},{"relation_name":"is_a","term_name":"L-glutamic acid 5-methyl ester","termid":"MOD:01453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester (Gln)","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"Deamidation followed by a methylation","type":"related"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"MOD_RES Glutamate methyl ester (Gln)","type":"exact"},{"name":"Methyl+Deamidated","type":"related"},{"name":"O5MeGlu(Gln)","type":"exact"},{"name":"deamidated 5-methyl esterified glutamine","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"}],"termid":"MOD:00657"}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["PMID:12060258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: PBO:0059580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1 family member 2","termid":"PBO:0059580"}


id: PBO:0076800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 1","termid":"PBO:0076800"}


id: PBO:0091744
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously assigned incorrectly as can1","termid":"PBO:0091744"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_03678","SJAG_00209","SJAG_00991","SJAG_03072","SJAG_02765","SJAG_01983","SJAG_02231","SJAG_00169","SJAG_04249","SJAG_03799","SJAG_01184","SJAG_05346","SJAG_04910","SJAG_00875","SJAG_03355","SJAG_03089","SJAG_03720","SJAG_03486","SJAG_01142","SJAG_00824","SJAG_03501","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83456,88894,89756,91730,94559,95246,97168,98753,100904,102966,103221,105119,105541,106829,109100,109953,110552,112130,112236,112486,113050,114214],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25366275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: GO:1903251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.","definition_xrefs":["GO_REF:0000086","GOC:sp","PMID:22231168","GOC:TermGenie","PMID:24934224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-ciliated epithelial cell differentiation","synonyms":[{"name":"multiciliate cell differentiation","type":"broad"}],"termid":"GO:1903251"}


id: PBO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta4","termid":"PBO:0018139"}


id: PBO:0052995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA5 antisense RNA 1","termid":"PBO:0052995"}


id: PBO:0038537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12B","termid":"PBO:0038537"}


id: GO:1904943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["PMID:23575307","GOC:BHF_miRNA","GOC:BHF","GOC:bc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac chamber formation","termid":"GO:1901211"},{"relation_name":"is_a","term_name":"negative regulation of cardiac ventricle development","termid":"GO:1904413"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle formation","termid":"GO:1904942"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle formation","synonyms":[{"name":"down regulation of cardiac ventricle formation","type":"exact"},{"name":"down-regulation of cardiac ventricle formation","type":"exact"},{"name":"downregulation of cardiac ventricle formation","type":"exact"},{"name":"inhibition of cardiac ventricle formation","type":"narrow"}],"termid":"GO:1904943"}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: GO:1902707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to ethanol.","definition_xrefs":["GO_REF:0000093","GOC:mengo_curators","PMID:19539744","GOC:TermGenie","PMID:18727018"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to ethanol (obsolete GO:1902707)","synonyms":[{"name":"hexose breakdown to ethanol","type":"exact"},{"name":"hexose catabolism to ethanol","type":"exact"},{"name":"hexose degradation to ethanol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902707"}


id: PBO:0046976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM86B2 divergent transcript","termid":"PBO:0046976"}


id: GO:0000045
data:
  {"annotated_genes":["SJAG_02699","SJAG_04502","SJAG_02414","SJAG_02640","SJAG_04294","SJAG_03100","SJAG_01467","SJAG_01274","SJAG_01251","SJAG_05017","SJAG_02441","SJAG_03851","SJAG_01876","SJAG_04655","SJAG_04232","SJAG_00114","SJAG_01283","SJAG_06309","SJAG_01561","SJAG_00059","SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72015,83265,87102,88137,88467,90220,90408,92276,93245,93534,95663,99351,100374,104495,105634,106533,107583,109605,109807,113811],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[85558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061739"}]},"cv_name":"biological_process","definition":"The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.","definition_xrefs":["GOC:autophagy","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00114":null,"SJAG_00645":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"autophagosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAS formation","type":"narrow"},{"name":"autophagic vacuole assembly","type":"exact"},{"name":"autophagic vacuole formation","type":"related"},{"name":"autophagosome biosynthesis","type":"exact"},{"name":"autophagosome formation","type":"exact"}],"termid":"GO:0000045","terms_by_termid":{"GO:0000045":null,"GO:0061739":null}}


id: GO:1905131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carcinine from one side of a membrane to the other.","definition_xrefs":["PMID:26653853","PMID:26713872","GO_REF:0000070","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carcinine transmembrane transporter activity","termid":"GO:1905131"}


id: PBO:0088781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit IV","termid":"PBO:0088781"}


id: PBO:0044729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12B, pseudogene","termid":"PBO:0044729"}


id: GO:0048737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation in the imaginal disc to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism.","definition_xrefs":["GOC:mtg_sensu","GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived appendage development","termid":"GO:0048737"}


id: FYPO:0003821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: PATO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000910 intercross sterile (obsolete PATO:0000910)","synonyms":[{"name":"intercross infertile","type":"related"}],"termid":"PATO:0000910"}


id: PBO:0076285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 2","termid":"PBO:0076285"}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: FYPO:0004356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleolus","synonyms":[{"name":"increased protein localisation to nucleolus","type":"exact"},{"name":"increased protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0004356"}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: PBO:0048553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 2","termid":"PBO:0048553"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"violet-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: PBO:0041704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 1 pseudogene 2","termid":"PBO:0041704"}


id: GO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanoate, 4-hydroxyphenylethanoate, or 2-(Indol-3-yl)-ethanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000952"}


id: SO:0000870
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing transcript sequence that is created by splicing exons from diferent genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced","synonyms":[{"name":"trans-spliced","type":"exact"}],"termid":"SO:0000870"}


id: PR:O14357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi1 gene.","definition_xrefs":["UniProtKB:O14357","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.11","synonyms":[{"name":"Spom972h-gpi1","type":"exact"}],"termid":"PR:O14357"}


id: GO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-A radiation stimulus. UV-A radiation (UV-A light) spans the wavelengths 315 to 400 nm.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-A","synonyms":[{"name":"response to UV-A light stimulus","type":"exact"},{"name":"response to UV-A radiation stimulus","type":"exact"},{"name":"response to UVA light stimulus","type":"exact"},{"name":"response to UVA radiation stimulus","type":"exact"}],"termid":"GO:0070141"}


id: GO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right lung development","synonyms":[{"name":"right pulmonary development","type":"exact"}],"termid":"GO:0060458"}


id: PBO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8B, pseudogene","termid":"PBO:0043758"}


id: FYPO:0002834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere","synonyms":[{"name":"decreased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"decreased heterochromatin silencing at centromere","type":"related"},{"name":"reduced chromatin silencing at centromere","type":"exact"}],"termid":"FYPO:0002834"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonaldehyde redutase activity (obsolete GO:0102233)","secondary_identifiers":["MetaCyc:RXN-12292"],"termid":"GO:0102233"}


id: PR:O74966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein G that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.05","secondary_identifiers":["UniProtKB:O74966"],"synonyms":[{"name":"Sm protein G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmG (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPG","type":"exact"},{"name":"snRNP-G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74966"}


id: GO:0060946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac blood vessel endothelial cell differentiation","termid":"GO:0060946"}


id: PBO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 6","termid":"PBO:0045882"}


id: FYPO:0007787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the meiotic cell cycle is arrested at the G2/MI phase transition. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:jh","PMID:28476936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"increased transcription during abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"}],"termid":"FYPO:0007787"}


id: PBO:0079870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ureidopropionase 1","termid":"PBO:0079870"}


id: GO:0038180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by nerve growth factor (NGF) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","PMID:11520933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"},{"relation_name":"part_of","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nerve growth factor signaling pathway","secondary_identifiers":["Wikipedia:Nerve_growth_factor"],"synonyms":[{"name":"NGF signaling pathway","type":"exact"},{"name":"nerve growth factor signalling pathway","type":"exact"}],"termid":"GO:0038180"}


id: PBO:0053560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 570","termid":"PBO:0053560"}


id: GO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving any of the intermediate compounds involved in the urea cycle, a cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete urea cycle intermediate metabolic process (obsolete GO:0000051)","synonyms":[{"name":"urea cycle intermediate metabolic process","type":"exact"},{"name":"urea cycle intermediate metabolism","type":"exact"}],"termid":"GO:0000051"}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: PBO:0044711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 2","termid":"PBO:0044711"}


id: GO:0043820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the irreversible NADH-dependent formation of propionyl-CoA from acryloyl-CoA.","definition_xrefs":["PMID:12603323"],"gene_count":0,"genotype_count":0,"name":"obsolete propionyl-CoA dehydrogenase activity (obsolete GO:0043820)","termid":"GO:0043820"}


id: GO:0038054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with estrogen and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:signaling","PMID:17379646","PMID:20960099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nuclear estrogen receptor activity","termid":"GO:0030284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0140110","GO:0003700","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled estrogen receptor activity","synonyms":[{"name":"G-protein coupled estrogen receptor activity","type":"exact"},{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0038054"}


id: GO:0007009
data:
  {"annotated_genes":["SJAG_02924","SJAG_02338","SJAG_02878","SJAG_02087","SJAG_02838","SJAG_01470","SJAG_00870","SJAG_00185","SJAG_00261","SJAG_01912","SJAG_04227","SJAG_00700","SJAG_02842","SJAG_04887","SJAG_02351","SJAG_04930","SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85630,87393,92001,99644,105939,106638,110649,113845,114458],"is_not":false,"summary":null,"term":"GO:0007009"},{"annotations":[92000,87866,106064,96915,90908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"},{"annotations":[92263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[102708,107773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097320"},{"annotations":[97197,96916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00261":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_01233":null,"SJAG_01470":null,"SJAG_01912":null,"SJAG_02087":null,"SJAG_02338":null,"SJAG_02351":null,"SJAG_02838":null,"SJAG_02842":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04227":null,"SJAG_04887":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plasma membrane organisation","type":"exact"},{"name":"plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:0007009","terms_by_termid":{"GO:0007009":null,"GO:0017121":null,"GO:0032220":null,"GO:0097036":null,"GO:0097320":null}}


id: GO:0032662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-19 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-19 production","termid":"GO:0032622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-19 production","secondary_identifiers":["GO:0045384"],"synonyms":[{"name":"regulation of IL-19 production","type":"exact"},{"name":"regulation of interleukin-19 biosynthetic process","type":"narrow"}],"termid":"GO:0032662"}


id: PBO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 2","termid":"PBO:0061132"}


id: PR:U3H0A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1884.01 gene.","definition_xrefs":["UniProtKB:U3H0A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPCC1884.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1884.01","synonyms":[{"name":"Spom972h-SPCC1884.01","type":"exact"}],"termid":"PR:U3H0A9"}


id: GO:0030942
data:
  {"annotated_genes":["SJAG_01282","SJAG_01759","SJAG_03684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87116,111110,111928],"is_not":false,"summary":null,"term":"GO:0030942"}]},"cv_name":"molecular_function","definition":"Binding to an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"endoplasmic reticulum signal peptide binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER signal peptide binding","type":"exact"}],"termid":"GO:0030942","terms_by_termid":{"GO:0030942":null}}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: RO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"},{"relation_name":"is_a","term_name":"results_in_organization_of","termid":"RO:0002592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_remodeling_of","termid":"RO:0002591"}


id: GO:0009310
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine breakdown","type":"exact"},{"name":"amine catabolism","type":"exact"},{"name":"amine degradation","type":"exact"}],"termid":"GO:0009310","terms_by_termid":{"GO:0009447":null}}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","PomBase:mah","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: PBO:0079366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha like 3","termid":"PBO:0079366"}


id: GO:0004476
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104236],"is_not":false,"summary":null,"term":"GO:0004476"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["EC:5.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3781832","RHEA:12356","Reactome:R-HSA-532549","MetaCyc:MANNPISOM-RXN"],"synonyms":[{"name":"D-mannose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"mannose phosphate isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphomannoisomerase activity","type":"related"},{"name":"phosphomannose isomerase activity","type":"related"}],"termid":"GO:0004476","terms_by_termid":{"GO:0004476":null}}


id: GO:0016229
data:
  {"annotated_genes":["SJAG_02855","SJAG_02291","SJAG_01326","SJAG_04124","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97532,113531],"is_not":false,"summary":null,"term":"GO:0016229"},{"annotations":[105951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003854"},{"annotations":[95697,96364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01326":null,"SJAG_02291":null,"SJAG_02855":null,"SJAG_04124":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016229","terms_by_termid":{"GO:0003854":null,"GO:0003865":null,"GO:0016229":null}}


id: GO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of noncoupled solute translocation or facilitated diffusion.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete uniport (obsolete GO:0015984)","synonyms":[{"name":"uniport","type":"exact"}],"termid":"GO:0015984"}


id: GO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with fibroblast growth factor (FGF) and transmitting the signal from one side of the membrane to the other by a mechanism independent of tyrosine kinase activity.","definition_xrefs":["GOC:signaling","PMID:11418238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"non-tyrosine kinase fibroblast growth factor receptor activity","synonyms":[{"name":"non-tyrosine kinase FGF receptor activity","type":"exact"},{"name":"non-tyrosine kinase FGFR activity","type":"exact"}],"termid":"GO:0001571"}


id: PR:Q9UUI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glioma tumor suppressor candidate region gene 2 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.09","secondary_identifiers":["UniProtKB:Q9UUI4"],"synonyms":[{"name":"Spom972h-GLTSCR2","type":"exact"}],"termid":"PR:Q9UUI4"}


id: GO:0009888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue development","secondary_identifiers":["Wikipedia:Histogenesis"],"synonyms":[{"name":"histogenesis","type":"exact"},{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009888"}


id: GO:0035311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a wing cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing cell fate specification","termid":"GO:0035311"}


id: PBO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 23","termid":"PBO:0046581"}


id: GO:0035182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron opaque backbone of the insect ovarian ring canal that is a part of or adjacent to the plasma membrane. The outer rim is established as the cleavage furrow is arrested, and contains F-actin, anillin, glycoproteins and at least one a protein with a high content of phosphorylated tyrosine residues.","definition_xrefs":["PMID:12435357","PMID:7925006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"female germline ring canal","termid":"GO:0035324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"female germline ring canal outer rim","synonyms":[{"name":"germline ring canal outer rim","type":"broad"},{"name":"nurse cell ring canal outer rim","type":"narrow"},{"name":"ovarian ring canal outer rim","type":"narrow"}],"termid":"GO:0035182"}


id: PBO:0028305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_G1_phase","termid":"PBO:0028305"}


id: GO:0070867
data:
  {"annotated_genes":["SJAG_02351","SJAG_02924"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91999,106063],"is_not":false,"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a mating projection tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane of cell tip","termid":"GO:0031520"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02351":null,"SJAG_02924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"mating projection tip membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating projection membrane fusion domain","type":"exact"},{"name":"shmoo tip membrane","type":"narrow"}],"termid":"GO:0070867","terms_by_termid":{"GO:0070867":null}}


id: GO:0098977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic transmission that results in an inhibitory postsynaptic potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"inhibitory chemical synaptic transmission","termid":"GO:0098977"}


id: PBO:0086258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates meiotic SPB cohesion and telomere clustering; localizes to both spindle pole bodies (SPBs) and telomeres; required for bouquet formation, effective homolog pairing, ordered cross-over distribution, sister chromatid cohesion at meiotic telomeres, chromosomal segregation and telomere-led rapid prophase movement","termid":"PBO:0086258"}


id: GO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0055086"],"is_obsolete":false,"name":"nicotinate nucleotide biosynthetic process from tryptophan","synonyms":[{"name":"nicotinate nucleotide anabolism from tryptophan","type":"exact"},{"name":"nicotinate nucleotide formation from tryptophan","type":"exact"},{"name":"nicotinate nucleotide synthesis from tryptophan","type":"exact"}],"termid":"GO:0019356"}


id: SO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000072 end_overlapping_gene (obsolete SO:0000072)","termid":"SO:0000072"}


id: PBO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 2","termid":"PBO:0050911"}


id: FYPO:0007392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which that are aneuploid due to the presence of an extra copy of chromosome 3 lose the extra chromosome, producing haploid daughter cells, at a higher frequency than in otherwise wild-type cells.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased loss of disomic chromosome 3","synonyms":[{"name":"increased haploidisation in presence of chromosome 3 disomy","type":"related"},{"name":"increased loss of disomic chromosome 3 during mitotic cell cycle","type":"related"},{"name":"increased loss of disomic chromosome 3 during vegetative growth","type":"exact"}],"termid":"FYPO:0007392"}


id: PBO:0081021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1C","termid":"PBO:0081021"}


id: PBO:0067738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 37","termid":"PBO:0067738"}


id: PBO:0076349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 15","termid":"PBO:0076349"}


id: SO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001057 enhanceosome (obsolete SO:0001057)","termid":"SO:0001057"}


id: PBO:0089641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specifity cAMP/cGMP phosphodiesterase Cgs2","termid":"PBO:0089641"}


id: GO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland cord are generated and organized. Mammary gland cords form when the mammary gland bud invades the mammary fat.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord morphogenesis","synonyms":[{"name":"mammary gland sprout morphogenesis","type":"exact"}],"termid":"GO:0060652"}


id: PR:P0CF96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mzt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CF96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic-spindle organizing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.15c","synonyms":[{"name":"Spom972h-mzt1","type":"exact"},{"name":"mitotic-spindle organizing protein associated with a ring of gamma-tubulin 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcripts altered in meiosis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CF96"}


id: PBO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 1","termid":"PBO:0042488"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: GO:0050645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + limonin = glucosyl-limonin + UDP.","definition_xrefs":["EC:2.4.1.210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"limonoid glucosyltransferase activity","secondary_identifiers":["RHEA:11256","MetaCyc:2.4.1.210-RXN"],"synonyms":[{"name":"LGTase activity","type":"related"},{"name":"limonoid UDP-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-limonoid glucosyltransferase activity","type":"related"}],"termid":"GO:0050645"}


id: GO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.","definition_xrefs":["PMID:11823805","NIF_Subcellular:sao1684283879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"calyx of Held","termid":"GO:0044305"}


id: MOD:00056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-acetyl-L-isoleucine.","definition_xrefs":["RESID:AA0047","PubMed:8034631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-acetamido-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylpentanoic acid","type":"exact"},{"name":"AcIle","type":"exact"},{"name":"N-acetyl-L-isoleucine","type":"exact"},{"name":"N-acetylated L-isoleucine","type":"exact"},{"name":"acetylisoleucine","type":"exact"}],"termid":"MOD:00056"}


id: GO:1990824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that depends on magnesium in order for one or more of its components to remain a part of the complex.","definition_xrefs":["PMID:10220587"],"gene_count":0,"genotype_count":0,"name":"obsolete magnesium-dependent protein complex (obsolete GO:1990824)","termid":"GO:1990824"}


id: PBO:0013447
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CHS5","termid":"PBO:0013447"}


id: GO:1900382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of thiamine biosynthetic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:16874521"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900382)","synonyms":[{"name":"regulation of thiamin biosynthetic process by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine anabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine formation by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine synthesis by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900382"}


id: PBO:0027887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation","termid":"PBO:0027887"}


id: PBO:0062980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 2","termid":"PBO:0062980"}


id: GO:0070814
data:
  {"annotated_genes":["SJAG_01693","SJAG_00084","SJAG_04060","SJAG_05027","SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83200,84219,85490,103336,113473],"is_not":false,"summary":null,"term":"GO:0070814"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen sulfide, H2S.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"hydrogen sulfide metabolic process","termid":"GO:0070813"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01693":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"hydrogen sulfide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen sulfide anabolism","type":"exact"},{"name":"hydrogen sulfide biosynthesis","type":"exact"},{"name":"hydrogen sulfide formation","type":"exact"},{"name":"hydrogen sulfide synthesis","type":"exact"},{"name":"hydrogen sulphide biosynthesis","type":"exact"},{"name":"hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:0070814","terms_by_termid":{"GO:0070814":null}}


id: PBO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin A2","termid":"PBO:0042178"}


id: PBO:0014241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator (predicted)","termid":"PBO:0014241"}


id: PBO:0041908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin binding intrinsic factor","termid":"PBO:0041908"}


id: GO:0046710
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64159],"is_not":false,"summary":null,"term":"GO:0046710"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"GDP metabolism","type":"exact"}],"termid":"GO:0046710","terms_by_termid":{"GO:0046710":null}}


id: PBO:0038681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 6","termid":"PBO:0038681"}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: PBO:0085119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif","termid":"PBO:0085119"}


id: GO:0016461
data:
  {"annotated_genes":["SJAG_04901","SJAG_04781","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92507,98999,90985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045160"}]},"cv_name":"cellular_component","definition":"A portmanteau term for myosins other than myosin II.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"unconventional myosin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005860"],"synonyms":[{"name":"non-muscle myosin","type":"related"}],"termid":"GO:0016461","terms_by_termid":{"GO:0045160":null}}


id: PBO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 9","termid":"PBO:0050231"}


id: GO:0141082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host reactive oxygen species (ROS)-mediated innate immune response by directly degrading host ROS. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27825304","PMID:28288207","PMID:19684141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated detoxification of host-generated reactive oxygen species","termid":"GO:0141082"}


id: GO:0097573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione.","definition_xrefs":["PMID:18992757","GOC:jd"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione oxidoreductase activity (obsolete GO:0097573)","termid":"GO:0097573"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: PR:Q09892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase sty1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.06c","secondary_identifiers":["PR:000027500","UniProtKB:Q09892"],"synonyms":[{"name":"HOG1","type":"related"},{"name":"PHH1","type":"related"},{"name":"SPAC24B11.06C","type":"related"},{"name":"SPC1","type":"related"},{"name":"Spom972h-HOG1","type":"exact"}],"termid":"PR:Q09892"}


id: GO:1905330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25745997","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of morphogenesis of an epithelium","synonyms":[{"name":"regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905330"}


id: RO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two independent continuants, the location and the target, in which the target is entirely within the location","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"location_of","termid":"RO:0001015"}


id: PBO:0091015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC domain protein Ats1","termid":"PBO:0091015"}


id: GO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal amide by hydrolysis and oxidation of an interior peptide in a secreted protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C-terminal amidation (obsolete GO:0018033)","termid":"GO:0018033"}


id: GO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}


id: GO:2000343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904209"],"synonyms":[{"name":"positive regulation of CCL2 secretion","type":"exact"},{"name":"positive regulation of CXCL2 production","type":"exact"},{"name":"positive regulation of MIP-2 production","type":"exact"},{"name":"positive regulation of MIP2 production","type":"exact"},{"name":"positive regulation of SCYB2 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000343"}


id: GO:0042450
data:
  {"annotated_genes":["SJAG_01461","SJAG_00635","SJAG_01592","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93834,98351,99203,114383],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine biosynthetic process","termid":"GO:0006526"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: PBO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 3","termid":"PBO:0080185"}


id: GO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granzyme B production","termid":"GO:0071661"}


id: PBO:0038679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5","termid":"PBO:0038679"}


id: PBO:0070031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1328, pseudogene","termid":"PBO:0070031"}


id: GO:1904534
data:
  {"annotated_genes":["SJAG_01916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905839"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:TermGenie","PMID:22579284","GOC:nc","GOC:BHF_telomere","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"negatively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of T loop disassembly","type":"exact"},{"name":"down regulation of telomeric loop disassembly","type":"exact"},{"name":"down-regulation of T loop disassembly","type":"exact"},{"name":"down-regulation of telomeric loop disassembly","type":"exact"},{"name":"downregulation of T loop disassembly","type":"exact"},{"name":"downregulation of telomeric loop disassembly","type":"exact"},{"name":"inhibition of T loop disassembly","type":"narrow"},{"name":"inhibition of telomeric loop disassembly","type":"narrow"},{"name":"negative regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904534","terms_by_termid":{"GO:1905839":null}}


id: PBO:0054819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2232","termid":"PBO:0054819"}


id: PBO:0071454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 60","termid":"PBO:0071454"}


id: PBO:0083284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene MAE1","termid":"PBO:0083284"}


id: GO:1904279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase V","synonyms":[{"name":"regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904279"}


id: PBO:0081434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285D, pseudogene","termid":"PBO:0081434"}


id: GO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by symbiont","termid":"GO:0052460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by symbiont","synonyms":[{"name":"up-regulation by host of nutrient release from symbiont","type":"exact"},{"name":"activation by host of nutrient release from symbiont","type":"narrow"},{"name":"positive regulation by host of nutrient release from symbiont","type":"exact"},{"name":"promotion of nutrient release from symbiont","type":"exact"},{"name":"stimulation by host of nutrient release from symbiont","type":"narrow"},{"name":"up regulation by host of nutrient release from symbiont","type":"exact"},{"name":"upregulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052519"}


id: GO:0031344
data:
  {"annotated_genes":["SJAG_01794","SJAG_00514","SJAG_03453","SJAG_02379","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89053,107250,86333,83329,85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection organisation","type":"exact"},{"name":"regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031344","terms_by_termid":{"GO:1902917":null}}


id: GO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cresol biosynthetic process (obsolete GO:0046198)","synonyms":[{"name":"cresol anabolism","type":"exact"},{"name":"cresol biosynthesis","type":"exact"},{"name":"cresol biosynthetic process","type":"exact"},{"name":"cresol formation","type":"exact"},{"name":"cresol synthesis","type":"exact"}],"termid":"GO:0046198"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: PBO:0078892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-1","termid":"PBO:0078892"}


id: GO:1990805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A scaffolding structure present within the inner region of the ciliary transition zone. The central cylinder lies between the outer doublet and inner singlet microtubules.","definition_xrefs":["PMID:26124290","PMID:2428682","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"central cylinder","termid":"GO:1990805"}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: PR:O13629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02855","PANTHER:PTHR12561:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.09c","secondary_identifiers":["UniProtKB:O13629"],"synonyms":[{"name":"Spom972h-LIPT1","type":"exact"}],"termid":"PR:O13629"}


id: FYPO:0003834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in the duration of meiotic interphase, which begins after cytokinesis and ends when meiotic prophase begins, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0051328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of meiotic interphase","termid":"FYPO:0003834"}


id: PBO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_benomyl","termid":"PBO:0031358"}


id: PBO:0085088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein; required for SPB insertion, SPB duplication, Kar5p localization near the SPB and nuclear fusion; interacts with Mps2p to tether half-bridge to core SPB; N-terminal acetylation by Eco1p regulates its role in nuclear organization; localizes to the SPB half bridge and telomeres during meiosis; required with Ndj1p and Csm4p for meiotic bouquet formation and telomere-led rapid prophase movement; member of the SUN protein family (Sad1-UNC-84 homology)","termid":"PBO:0085088"}


id: GO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}


id: PBO:0090403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex, histone acetyltransferase subunit Taf111","termid":"PBO:0090403"}


id: GO:0034389
data:
  {"annotated_genes":["SJAG_03609","SJAG_01458","SJAG_01180","SJAG_04049","SJAG_04059","SJAG_01537","SJAG_03162","SJAG_02980"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99229],"is_not":false,"summary":null,"term":"GO:0034389"},{"annotations":[110153,114867,90245,92350,106860,84215,107961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.","definition_xrefs":["GOC:dph","GOC:jl","PMID:18250201","GOC:mah","PMID:18093937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01458":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome organization","type":"exact"},{"name":"lipid body organization","type":"exact"},{"name":"lipid particle organisation","type":"exact"},{"name":"lipid particle organization","type":"exact"},{"name":"lipid particle organization and biogenesis","type":"broad"}],"termid":"GO:0034389","terms_by_termid":{"GO:0034389":null,"GO:0140042":null}}


id: PATO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001084 relative acceleration value (obsolete PATO:0001084)","termid":"PATO:0001084"}


id: GO:1990573
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883","SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84971,92638,101496],"is_not":false,"summary":null,"term":"GO:1990573"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9139127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"potassium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010107"],"synonyms":[{"name":"potassium import","type":"broad"},{"name":"potassium ion import","type":"broad"},{"name":"potassium ion uptake","type":"broad"}],"termid":"GO:1990573","terms_by_termid":{"GO:1990573":null}}


id: PBO:0071544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 9","termid":"PBO:0071544"}


id: GO:0103037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP = H+ + L-glyceraldehyde 3-phosphate + NADPH.","definition_xrefs":["GOC:pz","PMID:18620424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-glyceraldehyde 3-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN0-5410"],"termid":"GO:0103037"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["GOC:devbiol","GOC:tb","PO:0006001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: PBO:0039161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6","termid":"PBO:0039161"}


id: FYPO:0007191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal.","definition_xrefs":["PomBase:mah","PMID:31483748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during vegetative growth","synonyms":[{"name":"delayed peak level of Rad52 foci during vegetative growth","type":"related"},{"name":"increased duration of Rad22 focus presence during vegetative growth","type":"exact"},{"name":"increased duration of Rad52 focus presence during mitotic cell cycle","type":"related"},{"name":"increased persistence of Rad52 foci during vegetative growth","type":"exact"},{"name":"prolonged Rad52 focus presence during vegetative growth","type":"exact"}],"termid":"FYPO:0007191"}


id: PBO:0072579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 2","termid":"PBO:0072579"}


id: FYPO:0004203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased calcium import","synonyms":[{"name":"increased calcium import during mitotic cell cycle","type":"related"},{"name":"increased calcium import during vegetative growth","type":"exact"},{"name":"increased calcium import into cell","type":"exact"},{"name":"increased calcium ion import","type":"exact"},{"name":"increased calcium ion import across plasma membrane","type":"exact"},{"name":"increased calcium uptake","type":"exact"},{"name":"increased calcium uptake into intracellular compartments","type":"related"},{"name":"increased cellular calcium import","type":"exact"}],"termid":"FYPO:0004203"}


id: GO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT) mediated by B cells.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"},{"relation_name":"is_a","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"B cell tolerance induction in MALT","type":"exact"}],"termid":"GO:0002402"}


id: PBO:0071316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a","termid":"PBO:0071316"}


id: PBO:0071776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 4","termid":"PBO:0071776"}


id: PBO:0051487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 2","termid":"PBO:0051487"}


id: PBO:0031302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-auxotrophy","termid":"PBO:0031302"}


id: GO:0098001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion receptor-mediated virion attachment to host cell","termid":"GO:0098671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage reversible attachment to host cell","synonyms":[{"name":"phage reversible adsorption","type":"related"},{"name":"reversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0098001"}


id: PBO:0075696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 1","termid":"PBO:0075696"}


id: PBO:0057399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-1","termid":"PBO:0057399"}


id: PBO:0030026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_agglutination","termid":"PBO:0030026"}


id: GO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide hormone (obsolete GO:0005180)","synonyms":[{"name":"peptide hormone","type":"exact"}],"termid":"GO:0005180"}


id: MOD:01258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site C","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01258"}


id: PBO:0091182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf333","termid":"PBO:0091182"}


id: GO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homocystine + 2 reduced glutathione = oxidized glutathione + 2 homocysteine.","definition_xrefs":["EC:1.8.4.1","MetaCyc:1.8.4.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutathione-homocystine transhydrogenase activity","secondary_identifiers":["RHEA:11464"],"synonyms":[{"name":"glutathione:homocystine oxidoreductase activity","type":"related"}],"termid":"GO:0047139"}


id: GO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the apical dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical pole of neuron","termid":"GO:0044225"}


id: PBO:0041081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRK1 pseudogene 2","termid":"PBO:0041081"}


id: PBO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQA1 antisense RNA 1","termid":"PBO:0050026"}


id: PBO:0089965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein, LYR family Mzm1","termid":"PBO:0089965"}


id: FYPO:0005529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"normal protein localisation to chromatin at boundary element IRC1L","type":"exact"},{"name":"normal protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"normal protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005529"}


id: PBO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A4","termid":"PBO:0046950"}


id: GO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to actinin, any member of a family of proteins that crosslink F-actin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"actinin binding","secondary_identifiers":["GO:0051406"],"synonyms":[{"name":"beta-actinin binding","type":"narrow"},{"name":"capZ binding","type":"exact"}],"termid":"GO:0042805"}


id: PBO:0059614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 26","termid":"PBO:0059614"}


id: PR:Q11119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.06c","secondary_identifiers":["UniProtKB:Q11119"],"synonyms":[{"name":"SPBC6B1.06c","type":"related"},{"name":"Spom972h-USP5","type":"exact"},{"name":"UBA domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deubiquitinating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ucp2","type":"related"}],"termid":"PR:Q11119"}


id: PBO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC2 antisense RNA 1","termid":"PBO:0052436"}


id: GO:0008270
data:
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to a zinc ion (Zn).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion 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id: GO:0010523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport into cytosol","termid":"GO:0010522"},{"relation_name":"is_a","term_name":"negative regulation of cytosolic calcium ion concentration","termid":"GO:0051481"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"calcium ion transport into cytosol","termid":"GO:0060402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transport into cytosol","termid":"GO:0010523"}


id: PBO:0043685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 1","termid":"PBO:0043685"}


id: GO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to environmental oxygen.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerotaxis","synonyms":[{"name":"taxis in response to atmospheric oxygen","type":"exact"}],"termid":"GO:0009454"}


id: GO:0008976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + phosphate(n) = ADP + phosphate(n+1).","definition_xrefs":["EC:2.7.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"polyphosphate kinase activity","secondary_identifiers":["MetaCyc:POLYPHOSPHATE-KINASE-RXN","RHEA:19573"],"synonyms":[{"name":"ATP-polyphosphate phosphotransferase activity","type":"related"},{"name":"ATP:polyphosphate phosphotransferase activity","type":"related"},{"name":"polyphosphate polymerase activity","type":"exact"},{"name":"polyphosphoric acid kinase activity","type":"related"}],"termid":"GO:0008976"}


id: PBO:0086743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0086743"}


id: PBO:0043505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3C","termid":"PBO:0043505"}


id: GO:0098002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry receptor-mediated virion attachment to host cell","termid":"GO:0098670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage irreversible attachment to host cell","synonyms":[{"name":"irreversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"},{"name":"phage irreversible adsorption","type":"related"}],"termid":"GO:0098002"}


id: GO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052429)","synonyms":[{"name":"modulation by organism of symbiont B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052429"}


id: PBO:0109005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 3 (pseudogene)","termid":"PBO:0109005"}


id: PBO:0047254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member B","termid":"PBO:0047254"}


id: PBO:0074987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-29","termid":"PBO:0074987"}


id: PBO:0065644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 22","termid":"PBO:0065644"}


id: GO:0019312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-sorbose metabolic process","secondary_identifiers":["MetaCyc:P302-PWY"],"synonyms":[{"name":"L-sorbose metabolism","type":"exact"}],"termid":"GO:0019312"}


id: PR:P40382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt1 gene.","definition_xrefs":["UniProtKB:P40382","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.18","synonyms":[{"name":"Spom972h-cdt1","type":"exact"}],"termid":"PR:P40382"}


id: PBO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase Sxa2","termid":"PBO:0000549"}


id: FYPO:0003264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis I. The order of nuclei in the resulting ascus differs from normal as a result.","definition_xrefs":["PomBase:mah","PMID:24196444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"overlapping meiosis I spindles","synonyms":[{"name":"overlapping spindles at meiosis I","type":"exact"},{"name":"overlapping spindles during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003264"}


id: PBO:0034389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_directly_develop_into","termid":"PBO:0034389"}


id: PBO:0055533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2968","termid":"PBO:0055533"}


id: PBO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic delta subunit","termid":"PBO:0043085"}


id: PBO:0076924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Dp-1","termid":"PBO:0076924"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: GO:0048032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a galacturonate. Galacturonate is the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galacturonate binding","synonyms":[{"name":"galacturonic acid binding","type":"exact"}],"termid":"GO:0048032"}


id: GO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands resulting in the formation of the lung bud along the lateral-esophageal sulcus.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in lung induction (obsolete GO:0060499)","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in lung induction","type":"exact"}],"termid":"GO:0060499"}


id: GO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell differentiation","synonyms":[{"name":"regulation of glia cell differentiation","type":"exact"},{"name":"regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045685"}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["PMID:24415959","PMID:30032984","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"}],"termid":"GO:0120212"}


id: PBO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-12, pseudogene","termid":"PBO:0052889"}


id: GO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"negative regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010727"}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: PBO:0062315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily A member 2","termid":"PBO:0062315"}


id: PBO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A domain containing","termid":"PBO:0045998"}


id: GO:0042882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-arabinose, the L-enantiomer of arabinose, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose transmembrane transport","termid":"GO:0015751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-arabinose transmembrane transport","synonyms":[{"name":"L-arabinose transport","type":"related"}],"termid":"GO:0042882"}


id: PR:Q9URZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- put4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-specific permease put4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.10c","synonyms":[{"name":"Spom972h-put4","type":"exact"}],"termid":"PR:Q9URZ3"}


id: PBO:0039008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 3","termid":"PBO:0039008"}


id: GO:0035852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a horizontal cell is transported to, and/or maintained in, a specific location within the inner nuclear layer (INL) of the retina. A horizontal cell is a neuron that laterally connects other neurons in the inner nuclear layer (INL) of the retina. Targeting of retinal neurons to the appropriate lamina is vital to establish the architecture of the retina.","definition_xrefs":["CL:0000745","PMID:18094249","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization of cell","termid":"GO:0051674"},{"relation_name":"part_of","term_name":"retina layer formation","termid":"GO:0010842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"horizontal cell localization","synonyms":[{"name":"horizontal cell localisation","type":"exact"},{"name":"horizontal cell positioning","type":"exact"},{"name":"laminar positioning of retinal horizontal cell","type":"exact"},{"name":"retinal horizontal cell positioning","type":"exact"}],"termid":"GO:0035852"}


id: PBO:0053607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 640","termid":"PBO:0053607"}


id: GO:0033462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"GGC codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033462"}


id: PBO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smf1","termid":"PBO:0004158"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: PBO:0041284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9","termid":"PBO:0041284"}


id: PBO:0044005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein alpha s1","termid":"PBO:0044005"}


id: GO:0106138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Sec61 translocon complex.","definition_xrefs":["PMID:9792704","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Sec61 translocon complex binding","termid":"GO:0106138"}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: GO:0033152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin heavy chains V, D, and J gene segments are joined, and for immunoglobulin light chains V and J gene segments are joined.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin V(D)J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"exact"},{"name":"immunoglobulin V-D-J joining","type":"narrow"},{"name":"immunoglobulin V-D-J recombination","type":"narrow"},{"name":"immunoglobulin V-J joining","type":"narrow"},{"name":"immunoglobulin V-J recombination","type":"narrow"}],"termid":"GO:0033152"}


id: PBO:0064122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 2, transient receptor potential cation channel","termid":"PBO:0064122"}


id: FYPO:0003864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell during G0","synonyms":[{"name":"decreased accumulation of substance in cell during G0","type":"related"},{"name":"decreased level of substance in cell during cell quiescence","type":"exact"},{"name":"decreased level of substance in cell during quiescence","type":"exact"},{"name":"decreased substance level during G0","type":"exact"},{"name":"reduced level of substance in cell during G0","type":"exact"}],"termid":"FYPO:0003864"}


id: GO:0140276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heterochromatin maintenance that is involved in chromatin silencing at or near a centromere.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:21289066"],"gene_count":0,"genotype_count":0,"name":"obsolete pericentric heterochromatin maintenance (obsolete GO:0140276)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"related"},{"name":"heterochromatin maintenance involved in chromatin silencing at centromeric outer repeats","type":"exact"},{"name":"heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"}],"termid":"GO:0140276"}


id: PBO:0087727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p); this complex forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p","termid":"PBO:0087727"}


id: PBO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 7","termid":"PBO:0050190"}


id: GO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A virus-specific protein complex that possesses RNA-dependent RNA polymerase activity and replicates the genome of an RNA virus.","definition_xrefs":["PMID:15613301","GOC:mah","PMID:15574411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral RNA-directed RNA polymerase complex","termid":"GO:0031381"}


id: FYPO:0000065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-azacytidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to 5-azacytidine","synonyms":[{"name":"resistance to 5-azacytidine during mitotic cell cycle","type":"related"},{"name":"resistance to 5-azacytidine during vegetative growth","type":"exact"},{"name":"resistant to 5-azacytidine","type":"exact"}],"termid":"FYPO:0000065"}


id: PBO:0059027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 16","termid":"PBO:0059027"}


id: FYPO:0009029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on arginine nitrogen source","synonyms":[{"name":"increased growth on arginine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0009029"}


id: GO:1903681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["PMID:18394891","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"}


id: PBO:0089279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0089279"}


id: PBO:0075667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 2","termid":"PBO:0075667"}


id: PBO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 9","termid":"PBO:0060765"}


id: SO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the five_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_coding_region","synonyms":[{"name":"five prime exon coding region","type":"exact"}],"termid":"SO:0000196"}


id: PBO:0062433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 96 pseudogene","termid":"PBO:0062433"}


id: PBO:0027161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_meiotic_spindle_pole_body_during_meiosis_I","termid":"PBO:0027161"}


id: PBO:0053449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 397","termid":"PBO:0053449"}


id: PBO:0076622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor D","termid":"PBO:0076622"}


id: PBO:0084429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major transcriptional repressor of DNA-damage-regulated genes; recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins","termid":"PBO:0084429"}


id: FYPO:0005320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during metaphase of mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic metaphase","synonyms":[{"name":"normal protein accumulation during mitotic metaphase","type":"related"},{"name":"normal protein level during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein level during mitotic metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005320"}


id: PBO:0041300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4D","termid":"PBO:0041300"}


id: GO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing a behavioral or physiological response(s) from a responding organism or cell that leads to the transfer or union of genetic material between organisms or cells. The mating pheromone can either be retained on the cell surface or secreted.","definition_xrefs":["GOC:elh","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0005186","GO:0098772","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"mating pheromone activity","termid":"GO:0000772"}


id: PBO:0053968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1278","termid":"PBO:0053968"}


id: PBO:0059037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 25","termid":"PBO:0059037"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0003914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR92","termid":"PBO:0003914"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: PBO:0029131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination","termid":"PBO:0029131"}


id: GO:0036061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a muscle cell towards a tendon cell in response to an external stimulus. Tendon cells, for example, produce positive guidance cues that attract muscle cells.","definition_xrefs":["PMID:19793885","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"muscle cell attraction","type":"related"},{"name":"muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:0036061"}


id: PR:O43049
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04023","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.01c","secondary_identifiers":["UniProtKB:O43049"],"synonyms":[{"name":"PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPP5C","type":"exact"}],"termid":"PR:O43049"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: PBO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 24","termid":"PBO:0080052"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: PBO:0088144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar SNARE protein; functions with Vam3p in vacuolar protein trafficking; has an N-terminal PX domain (phosphoinositide-binding module) that binds PtdIns-3-P and mediates membrane binding; SNAP-25 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0088144"}


id: FYPO:0004586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and hydroxyurea. Cells stop growing (and may die) at concentrations of caffeine and hydroxyurea that allow wild type cells to grow.","definition_xrefs":["PMID:10757807","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine and hydroxyurea","synonyms":[{"name":"hypersensitive to caffeine and hydroxyurea","type":"exact"},{"name":"sensitive to caffeine and HU","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and hydroxyurea during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea in combination","type":"exact"}],"termid":"FYPO:0004586"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: RO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between elements of a musculoskeletal system or its analogs.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomechanically_related_to","termid":"RO:0002567"}


id: GO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=7 symmetry. The T=7 capsid is composed of 12 pentameric and 60 hexameric capsomeres.","definition_xrefs":["VZ:804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=7 icosahedral viral capsid","termid":"GO:0039620"}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: PBO:0052202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ1 antisense RNA 1","termid":"PBO:0052202"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: GO:0044611
data:
  {"annotated_genes":["SJAG_02757","SJAG_03182","SJAG_00375"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96110,96867,112461],"is_not":false,"summary":null,"term":"GO:0044611"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the inner rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two inner rings are each composed of Nup192p, Nup188p, Nup170p and Nup157p. In vertebrates, the two inner rings are each composed of Nup205, Nup188 and Nup155. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup170 complex.","definition_xrefs":["PMID:18046406","PMID:19524430","PMID:20947011","PMID:22419078","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00375":null,"SJAG_02757":null,"SJAG_03182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005643","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear pore inner ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nup170 complex","type":"exact"}],"termid":"GO:0044611","terms_by_termid":{"GO:0044611":null}}


id: PBO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta4","termid":"PBO:0001792"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: GO:0052829
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111520],"is_not":false,"summary":null,"term":"GO:0052829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855232"],"termid":"GO:0052829","terms_by_termid":{"GO:0052829":null}}


id: GO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase C signaling","termid":"GO:0090036"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of protein kinase C signaling","synonyms":[{"name":"positive regulation of protein kinase C signaling cascade","type":"related"},{"name":"positive regulation of protein kinase C signalling cascade","type":"exact"}],"termid":"GO:0090037"}


id: PBO:0091925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane brefeldin A efflux transporter Bfr1","termid":"PBO:0091925"}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: PBO:0062924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y11","termid":"PBO:0062924"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: PR:Q9UTH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21294:SF0","OMA:SCHPO01161","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.02c","secondary_identifiers":["UniProtKB:Q9UTH2"],"synonyms":[{"name":"Spom972h-ETFB","type":"exact"},{"name":"beta-ETF (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH2"}


id: PR:Q10217
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR20863:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl carrier protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.09","secondary_identifiers":["UniProtKB:Q10217"],"synonyms":[{"name":"ACP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDUFAB1","type":"exact"}],"termid":"PR:Q10217"}


id: PATO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral to","synonyms":[{"name":"anterior_ to","type":"exact"}],"termid":"PATO:0001196"}


id: PBO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction mediating and regulatory protein, p53 cofactor","termid":"PBO:0052020"}


id: MOD:00850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an unnatural residue that is not considered to be derived from a natural residue by some chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnatural residue","termid":"MOD:00850"}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: FYPO:0001737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal pantothenate import","synonyms":[{"name":"abnormal pantothenate import across plasma membrane","type":"exact"},{"name":"abnormal pantothenate import during mitotic cell cycle","type":"related"},{"name":"abnormal pantothenate import during vegetative growth","type":"exact"},{"name":"abnormal pantothenate import into cell","type":"exact"},{"name":"abnormal pantothenate uptake","type":"exact"},{"name":"abnormal pantothenic acid import","type":"related"}],"termid":"FYPO:0001737"}


id: PBO:0029232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029232"}


id: PBO:0006231
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this transcript could be on either strand","termid":"PBO:0006231"}


id: GO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digestive tract development","termid":"GO:0048566"}


id: PATO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic cyclicity","termid":"PATO:0002184"}


id: GO:1990144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to hypoxia (lowered oxygen tension). Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. The pathway ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:rl","PMID:20436456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}


id: PBO:0053993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1312","termid":"PBO:0053993"}


id: PBO:0080941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zeta chain of T cell receptor associated protein kinase 70","termid":"PBO:0080941"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: GO:0031925
data:
  {"annotated_genes":["SJAG_03652","SJAG_03808","SJAG_02152","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85619,85620,113468,114744],"is_not":false,"summary":null,"term":"GO:0031925"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxal from one side of a membrane to the other. Pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pyridoxal transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal transporter activity","type":"broad"}],"termid":"GO:0031925","terms_by_termid":{"GO:0031925":null}}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: GO:1905688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:bc","GOC:TermGenie","PMID:23091060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid kinase activity","termid":"GO:0090219"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol kinase activity","termid":"GO:1905687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of diacylglycerol kinase activity","synonyms":[{"name":"down regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down regulation of DG kinase activity","type":"exact"},{"name":"down regulation of DGK activity","type":"exact"},{"name":"down regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down regulation of diglyceride kinase activity","type":"exact"},{"name":"down regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down-regulation of DG kinase activity","type":"exact"},{"name":"down-regulation of DGK activity","type":"exact"},{"name":"down-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down-regulation of diglyceride kinase activity","type":"exact"},{"name":"down-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"downregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"downregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"downregulation of DG kinase activity","type":"exact"},{"name":"downregulation of DGK activity","type":"exact"},{"name":"downregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"downregulation of diglyceride kinase activity","type":"exact"},{"name":"downregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"inhibition of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"inhibition of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"inhibition of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"inhibition of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of DG kinase activity","type":"narrow"},{"name":"inhibition of DGK activity","type":"narrow"},{"name":"inhibition of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"inhibition of diglyceride kinase activity","type":"narrow"},{"name":"inhibition of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"negative regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"negative regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"negative regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of DG kinase activity","type":"exact"},{"name":"negative regulation of DGK activity","type":"exact"},{"name":"negative regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"negative regulation of diglyceride kinase activity","type":"exact"},{"name":"negative regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905688"}


id: PBO:0089145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, S-adenosylmethionine Pet802","termid":"PBO:0089145"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: PBO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC-8 DNA repair homolog","termid":"PBO:0003330"}


id: GO:0000262
data:
  {"annotated_genes":["SJAG_00611","SJAG_01807","SJAG_03068","SJAG_MIT06","SJAG_00153","SJAG_MIT05","SJAG_03906","SJAG_03780","SJAG_MIT07","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84043,94987,98611,98630,101735,104399,108423,115025,115026,115033,115034],"is_not":false,"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"A chromosome found in the mitochondrion of a eukaryotic cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"mitochondrial nucleoid","termid":"GO:0042645"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_03068":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial chromosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1186327184"],"synonyms":[{"name":"mitochondrial DNA","type":"narrow"},{"name":"mitochondrial genome","type":"related"},{"name":"mtDNA","type":"narrow"}],"termid":"GO:0000262","terms_by_termid":{"GO:0000262":null}}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: PBO:0028433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_acetylation","termid":"PBO:0028433"}


id: PBO:0054496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1896","termid":"PBO:0054496"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4727"],"termid":"GO:0102689"}


id: PBO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A1","termid":"PBO:0039612"}


id: FYPO:0003597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is abolished.","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished snRNA 3'-end processing","synonyms":[{"name":"abolished snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abolished snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"snRNA 3'-end processing abolished","type":"exact"}],"termid":"FYPO:0003597"}


id: PBO:0003566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2 (predicted)","termid":"PBO:0003566"}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: PBO:0109826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase Sgp1/Lcb3","termid":"PBO:0109826"}


id: GO:0098596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning in which new behaviors are acquired through imitation.","definition_xrefs":["Wikipedia:Imitative_learning&oldid=593192364","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"observational learning","termid":"GO:0098597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imitative learning","secondary_identifiers":["Wikipedia:Imitative_learning","Wikipedia:Observational_learning#Observational_learning_compared_to_imitation"],"termid":"GO:0098596"}


id: GO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"is_a","term_name":"negative regulation of muscle tissue development","termid":"GO:1901862"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue development","synonyms":[{"name":"down regulation of skeletal muscle development","type":"exact"},{"name":"down-regulation of skeletal muscle development","type":"exact"},{"name":"downregulation of skeletal muscle development","type":"exact"},{"name":"inhibition of skeletal muscle development","type":"narrow"}],"termid":"GO:0048642"}


id: GO:0043252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sodium-independent organic anion transport","termid":"GO:0043252"}


id: PBO:0087096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal assembly factor and 66S pre-ribosomal particle constituent; subunit of the Nop7-subcomplex (PeBoW complex), required for an early nucleolar step in pre-60S ribosomal particle maturation; interaction of its ubiquitin-like (UBL) domain with the MIDAS domain in the Rea1p tail triggers release of the subcomplex and possibly other biogenesis factors via cycles of ATP hydrolysis; involved in the processing of 27S pre-rRNA; contains an N-terminal UBL domain and seven C-terminal WD repeats","termid":"PBO:0087096"}


id: MOD:00060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-acetyl-L-serine.","definition_xrefs":["PubMed:2106685","PubMed:14730666","PubMed:1880797","PubMed:6997045","PubMed:15350136","PubMed:11857757","RESID:AA0051","PubMed:12175151","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-serine","synonyms":[{"name":"(2S)-2-acetamido-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylserine","type":"exact"},{"name":"N-acetyl-L-serine","type":"exact"},{"name":"N-acetylated L-serine","type":"exact"},{"name":"N-acetylserine","type":"exact"},{"name":"NAcSer","type":"exact"}],"termid":"MOD:00060"}


id: PATO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A susceptibility toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"susceptible toward","termid":"PATO:0001152"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased susceptibility toward","synonyms":[{"name":"decreased susceptibility","type":"exact"},{"name":"low susceptibility toward","type":"exact"}],"termid":"PATO:0001670"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: PBO:0066593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOG family member 2, pseudogene","termid":"PBO:0066593"}


id: CHEBI:30746
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoic acid","termid":"CHEBI:30746"}


id: PBO:0058662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6790","termid":"PBO:0058662"}


id: FYPO:0002627
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cell wall differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall","termid":"FYPO:0007492"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002946","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal level of substance in cell wall during vegetative growth","type":"exact"},{"name":"altered level of substance in cell wall during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002627","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: SO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial LSU rRNA is an RNA component of the large subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA","synonyms":[{"name":"MT LSU rRNA","type":"exact"},{"name":"mitochondrial LSU rRNA","type":"exact"},{"name":"mitochondrial large subunit rRNA","type":"exact"}],"termid":"SO:0002345"}


id: SO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UST located in the 3'UTR of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UST","termid":"SO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UST","synonyms":[{"name":"3' UST","type":"related"}],"termid":"SO:0001465"}


id: PR:O13958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00633","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase srb10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.17c","secondary_identifiers":["UniProtKB:O13958"],"synonyms":[{"name":"Spom972h-CDK8","type":"exact"},{"name":"cyclin-dependent kinase 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13958"}


id: RO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two neurons connected directly via a synapse, or indirectly via a series of synaptically connected neurons.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_neural_circuit_with","termid":"RO:0000300"}


id: PBO:0064789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1J","termid":"PBO:0064789"}


id: GO:0055023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"is_a","term_name":"positive regulation of heart growth","termid":"GO:0060421"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue growth","synonyms":[{"name":"activation of cardiac muscle growth","type":"narrow"},{"name":"positive regulation of heart muscle growth","type":"exact"},{"name":"stimulation of cardiac muscle growth","type":"narrow"},{"name":"up regulation of cardiac muscle growth","type":"exact"},{"name":"up-regulation of cardiac muscle growth","type":"exact"},{"name":"upregulation of cardiac muscle growth","type":"exact"}],"termid":"GO:0055023"}


id: GO:0018874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"benzoate metabolic process","secondary_identifiers":["MetaCyc:P321-PWY","UM-BBD_pathwayID:benz2"],"synonyms":[{"name":"benzoate metabolism","type":"exact"}],"termid":"GO:0018874"}


id: PBO:0044625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2C","termid":"PBO:0044625"}


id: FYPO:0009065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a combination of X-rays and ramapycin.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"},{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to X-rays and rapamycin during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth when treated with rapamycin and X-rays","type":"exact"},{"name":"resistant to X-rays and rapamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0009065"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: PBO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein (predicted)","termid":"PBO:0002556"}


id: PBO:0056118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 4","termid":"PBO:0056118"}


id: PR:O42958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc2 gene.","definition_xrefs":["UniProtKB:O42958","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2-associated protein pat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.10c","synonyms":[{"name":"Spom972h-pdc2","type":"exact"},{"name":"decapping activator and translational repressor pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"topoisomerase II-associated protein pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42958"}


id: GO:0021961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the midbrain towards target cells in the diencephalon.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior commissure morphogenesis","termid":"GO:0021961"}


id: GO:1990768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products.","definition_xrefs":["PMID:10807413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric mucosal blood circulation","synonyms":[{"name":"stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1990768"}


id: GO:0030999
data:
  {"annotated_genes":["SJAG_02104","SJAG_03698","SJAG_04457","SJAG_03048","SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85054,113066],"is_not":false,"summary":null,"term":"GO:0030999"},{"annotations":[89468,106055],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[98118],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"The cell cycle process in which linear elements are assembled in association with fission yeast chromosomes during meiotic prophase. Linear element assembly begins with LinE complex formation and ends when LinE complexes are associated with chromatin in structures visible as nuclear foci. A linear element is a proteinaceous scaffold related to the synaptonemal complex.","definition_xrefs":["GOC:jb","GOC:mah","PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03698":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"linear element assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"linear element formation","type":"related"}],"termid":"GO:0030999","terms_by_termid":{"GO:0030999":null,"GO:0062123":null,"GO:0090006":null}}


id: GO:0009042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + pyruvate = 3-methyl-2-oxobutanoate + L-alanine.","definition_xrefs":["RHEA:22912","EC:2.6.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"valine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:VALINE-PYRUVATE-AMINOTRANSFER-RXN","KEGG_REACTION:R01215"],"synonyms":[{"name":"L-valine:pyruvate aminotransferase activity","type":"related"},{"name":"alanine--valine transaminase activity","type":"related"},{"name":"alanine-oxoisovalerate aminotransferase activity","type":"related"},{"name":"transaminase C activity","type":"narrow"},{"name":"valine--pyruvate aminotransferase activity","type":"related"},{"name":"valine-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0009042"}


id: GO:0103000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 4-hydroxylamino-2,6-dinitrotoluene = 4-hydroxylamino-2,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:4-hydroxylamino-2,6-dinitrotoluene-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9748"],"termid":"GO:0103000"}


id: GO:0018190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with octanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein octanoylation","synonyms":[{"name":"protein amino acid octanoylation","type":"exact"}],"termid":"GO:0018190"}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: GO:0031261
data:
  {"annotated_genes":["SJAG_00696","SJAG_04341","SJAG_02098","SJAG_02667","SJAG_00327","SJAG_00536","SJAG_05301","SJAG_01762","SJAG_00874","SJAG_01624","SJAG_03927","SJAG_03451","SJAG_02394","SJAG_04210","SJAG_00884","SJAG_00857","SJAG_01354","SJAG_02800","SJAG_01267","SJAG_04995","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85911,87449,89520,90143,92971,95105,102225,103060,103664,103889,106083,107265,107529,109113,109513,111079,111250],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[88540,109094,107799,109430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.","definition_xrefs":["PMID:12694535","GOC:hjd","GOC:jl","GOC:pr","GOC:vw","PMID:15194812","PMID:17230184","GOC:rb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02098":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04995":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA replication preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-IC","type":"exact"}],"termid":"GO:0031261","terms_by_termid":{"GO:0000811":null,"GO:0031261":null}}


id: MOD:00619
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because entry 300 is redundant with Unimod 6 remap to MOD:01328","definition_xrefs":["Unimod:300"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00619 hydroxylethanone (obsolete MOD:00619)","termid":"MOD:00619"}


id: GO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the concentration of calcium ions in the cytosol after fertilization or the physiological activation of an egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","synonyms":[{"name":"elevation of cytosolic calcium ion concentration involved in egg activation","type":"exact"}],"termid":"GO:0060470"}


id: MOD:00766
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational - C-terminal loss of lysine","definition_xrefs":["PubMed:16078144","Unimod:313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C terminal -K from HC of MAb","synonyms":[{"name":"Loss of C-terminal K from Heavy Chain of MAb","type":"related"},{"name":"Lys-loss","type":"related"}],"termid":"MOD:00766"}


id: GO:0019553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-citramalate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glutamate catabolic process via L-citramalate","secondary_identifiers":["MetaCyc:GLUDEG-II-PWY"],"synonyms":[{"name":"glutamate breakdown via L-citramalate","type":"exact"},{"name":"glutamate degradation via L-citramalate","type":"exact"}],"termid":"GO:0019553"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["PMID:19214183","PMID:19858100","PMID:19581589","PMID:19809492","GOC:BHF_telomere","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: PR:000028945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase oxidized form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Ox+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Ox+","type":"exact"},{"name":"Spom-MSRA/Ox+","type":"exact"}],"termid":"PR:000028945"}


id: PBO:0088597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1/Cdc20","termid":"PBO:0088597"}


id: GO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a Langerhans cell in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:16387601","PMID:16056255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell chemotaxis","termid":"GO:0002409"}


id: PBO:0078354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-2","termid":"PBO:0078354"}


id: GO:1903163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any sodium ion transmembrane transporter activity that is involved in sodium ion import into cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium ion transmembrane transporter activity involved in sodium ion import into cell (obsolete GO:1903163)","synonyms":[{"name":"sodium ion transmembrane transporter activity involved in sodium ion import into cell","type":"exact"},{"name":"sodium transporter activity involved in sodium ion import into cell","type":"exact"}],"termid":"GO:1903163"}


id: PBO:0050875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH3B divergent transcript","termid":"PBO:0050875"}


id: GO:0007359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the posterior (abdominal) regions of the embryo are specified by the gap genes.","definition_xrefs":["GOC:isa_complete","GOC:dph","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior abdomen determination","termid":"GO:0007359"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: PBO:0089200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family","termid":"PBO:0089200"}


id: PBO:0012603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012603"}


id: PBO:0027006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_prospore_membrane_formation","termid":"PBO:0027006"}


id: PBO:0028034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_microtubule_array_organization","termid":"PBO:0028034"}


id: SO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from the same organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Autopolyploid"],"termid":"SO:0001255"}


id: PBO:0065080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase 2B, pseudogene","termid":"PBO:0065080"}


id: GO:1904906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["PMID:19460962","GO_REF:0000058","GOC:BHF_miRNA","GOC:bc","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"positively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"activation of endothelial cell-matrix adhesion via fibronectin","type":"narrow"},{"name":"up regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"up-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"upregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"}],"termid":"GO:1904906"}


id: PBO:0088269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1","termid":"PBO:0088269"}


id: GO:0034777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a recycling endosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"recycling endosome lumen","termid":"GO:0034777"}


id: PBO:0066495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 6","termid":"PBO:0066495"}


id: PBO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.3","termid":"PBO:0004969"}


id: PBO:0070125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 39 pseudogene","termid":"PBO:0070125"}


id: PBO:0067211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 277, pseudogene","termid":"PBO:0067211"}


id: GO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic cations at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular monovalent inorganic cation homeostasis (obsolete GO:0030004)","termid":"GO:0030004"}


id: GO:1903327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"negatively_regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"negative regulation of tRNA metabolic process","synonyms":[{"name":"down regulation of tRNA metabolic process","type":"exact"},{"name":"down regulation of tRNA metabolism","type":"exact"},{"name":"down-regulation of tRNA metabolic process","type":"exact"},{"name":"down-regulation of tRNA metabolism","type":"exact"},{"name":"downregulation of tRNA metabolic process","type":"exact"},{"name":"downregulation of tRNA metabolism","type":"exact"},{"name":"inhibition of tRNA metabolic process","type":"narrow"},{"name":"inhibition of tRNA metabolism","type":"narrow"},{"name":"negative regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903327"}


id: PBO:0076554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAX1BP1 antisense RNA 1","termid":"PBO:0076554"}


id: PBO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5","termid":"PBO:0060223"}


id: RO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are reduced or eliminated by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_ameliorated_by","termid":"RO:0003310"}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: PBO:0038600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 1","termid":"PBO:0038600"}


id: PBO:0057907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3610","termid":"PBO:0057907"}


id: PBO:0028893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_at_telomere","termid":"PBO:0028893"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: GO:0141051
data:
  {"annotated_genes":["SJAG_04186","SJAG_00581","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[105335,92870,99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[99971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine + H2O = histone H4 L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone H4.","definition_xrefs":["PMID:12590135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016810","GO:0140096","GO:0019213","GO:0033558","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H4K deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141051","terms_by_termid":{"GO:0034739":null,"GO:0046970":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: FYPO:0006979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular coenzyme Q10 level","synonyms":[{"name":"increased cellular UQ10 level","type":"exact"},{"name":"increased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"increased cellular ubiquinone 10 level","type":"exact"}],"termid":"FYPO:0006979"}


id: GO:1990154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the pentameric maltose transporter complex bound to two enzyme IIA (EIIA) molecules. EIIA is a component of the glucose-specific phosphotransferase system that inhibits maltose transport from the periplasm to the cytoplasm. When EIIA-bound, the maltose transporter remains in the open, inward-facing conformation, which prevents binding of maltose-loaded maltose binding protein (MBP) to the transporter.","definition_xrefs":["GOC:bf","GOC:bhm","PMID:23770568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"enzyme IIA-maltose transporter complex","synonyms":[{"name":"EIIA(Glc)-MalFGK2 complex","type":"exact"},{"name":"EIIA(Glc)-maltose transporter complex","type":"exact"},{"name":"maltose transporter inhibitor complex","type":"related"}],"termid":"GO:1990154"}


id: GO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleotide-excision repair complex formed by the association of the heterodimeric endonuclease XPF/ERCC4-ERCC1 (Rad1p and Rad10p in S. cerevisiae) with the RAD52 protein.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RAD52-ERCC4-ERCC1 complex","termid":"GO:0070312"}


id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: GO:0150119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell-cell junction","synonyms":[{"name":"negative regulation of protein localisation to cell-cell junction","type":"exact"}],"termid":"GO:0150119"}


id: PBO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp15 (predicted)","termid":"PBO:0003209"}


id: GO:1901602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dethiobiotin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dethiobiotin binding","termid":"GO:1901602"}


id: PBO:0054312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1704","termid":"PBO:0054312"}


id: PBO:0083548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YDL063C; YDL062W is not essential","termid":"PBO:0083548"}


id: GO:0022410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process involved in the cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle","termid":"GO:0042745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle process","termid":"GO:0022410"}


id: GO:2000231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"},{"relation_name":"positively_regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic stellate cell proliferation","termid":"GO:2000231"}


id: PBO:0056058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1","termid":"PBO:0056058"}


id: PR:O42666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but1 gene.","definition_xrefs":["UniProtKB:O42666","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.12c","synonyms":[{"name":"Spom972h-but1","type":"exact"},{"name":"meiotically up-regulated gene 107 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42666"}


id: GO:0034770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of one or more methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 methylation (obsolete GO:0034770)","synonyms":[{"name":"histone H4 K20 methylation","type":"exact"},{"name":"histone H4K20me","type":"exact"},{"name":"histone lysine H4 K20 methylation","type":"exact"}],"termid":"GO:0034770"}


id: GO:1904642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dinitrophenol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24336883","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to dinitrophenol","termid":"GO:1904641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dinitrophenol","synonyms":[{"name":"cellular response to dinitrophenols","type":"related"}],"termid":"GO:1904642"}


id: PBO:0079320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 10","termid":"PBO:0079320"}


id: PBO:0053982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1298","termid":"PBO:0053982"}


id: GO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of (2R,6R)-lanthionine (L-lanthionine).","definition_xrefs":["RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2R,6R)-lanthionine (obsolete GO:0018154)","termid":"GO:0018154"}


id: GO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-succinyltransferase activity","termid":"GO:0016750"}


id: PBO:0049889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 8","termid":"PBO:0049889"}


id: PBO:0063794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 21B","termid":"PBO:0063794"}


id: PBO:0054517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1917","termid":"PBO:0054517"}


id: PBO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog (predicted)","termid":"PBO:0003617"}


id: GO:1904776
data:
  {"annotated_genes":["SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[94114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["PMID:17115027","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904776","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: PBO:0087570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; involved in transcription initiation, required for nucleotide excision repair, similar to 52 kDa subunit of human TFIIH","termid":"PBO:0087570"}


id: GO:1901855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0042559"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin synthesis","type":"exact"}],"termid":"GO:1901855"}


id: PBO:0073573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 1","termid":"PBO:0073573"}


id: PBO:0084418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major CTP synthase isozyme (see also URA8); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA7 has a paralog, URA8, that arose from the whole genome duplication","termid":"PBO:0084418"}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10743:SF0","PRO:DNx","OMA:SCHPO02094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: GO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine.","definition_xrefs":["EC:2.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741","GO:0140097"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity","secondary_identifiers":["GO:0008326","RHEA:13681","MetaCyc:DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"DNA 5-cytosine methylase activity","type":"related"},{"name":"DNA cytosine C(5) methylase activity","type":"related"},{"name":"DNA cytosine C5 methylase activity","type":"related"},{"name":"DNA cytosine methylase activity","type":"broad"},{"name":"DNA-cytosine 5-methylase activity","type":"related"},{"name":"DNA-cytosine methyltransferase activity","type":"broad"},{"name":"S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"cytosine 5-methyltransferase activity","type":"related"},{"name":"cytosine DNA methylase activity","type":"broad"},{"name":"cytosine DNA methyltransferase activity","type":"broad"},{"name":"cytosine-specific DNA methyltransferase activity","type":"related"},{"name":"deoxyribonucleic (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic acid (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"deoxyribonucleic methylase activity","type":"broad"},{"name":"methylphosphotriester-DNA methyltransferase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"},{"name":"site-specific DNA-methyltransferase (cytosine-specific) activity","type":"narrow"},{"name":"type II DNA methylase activity","type":"related"}],"termid":"GO:0003886"}


id: PBO:0084567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein; has similarity to mammalian mannose-6-phosphate receptors; possibly functions as a sorting receptor in the delivery of vacuolar hydrolases; protein abundance increases in response to DNA replication stress","termid":"PBO:0084567"}


id: PR:O60111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein MCP2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.02","secondary_identifiers":["UniProtKB:O60111"],"synonyms":[{"name":"Spom972h-ADCK1","type":"exact"}],"termid":"PR:O60111"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: FYPO:0004800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:25891897","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished premeiotic DNA replication during azygotic meiotic cell cycle","synonyms":[{"name":"abolished DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"abolished premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"abolished premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"absent premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA replication abolished during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004800"}


id: SO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long non-coding RNA.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_gene","synonyms":[{"name":"lnc RNA gene","type":"exact"},{"name":"lnc_RNA_gene","type":"exact"},{"name":"long_non_coding_RNA_gene","type":"exact"}],"termid":"SO:0002127"}


id: GO:2000380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm development","termid":"GO:2000380"}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: PBO:0012308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012308"}


id: GO:1903482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903482)","synonyms":[{"name":"activation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"activation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903482"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PBO:0057236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 423","termid":"PBO:0057236"}


id: FYPO:0002688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles, but does not elongate. The spindle pole bodies fail to separate, and often become spatially closer together, suggesting that the spindle shrinks.","definition_xrefs":["PomBase:mah","PMID:23885124"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0000337","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during prophase","synonyms":[{"name":"SPB convergence","type":"exact"},{"name":"broken mitotic spindle without elongation during prophase","type":"related"},{"name":"mitotic spindle breakage without elongation during prophase","type":"related"},{"name":"mitotic spindle collapse without elongation during prophase during vegetative growth","type":"exact"},{"name":"spindle collapse without elongation during mitotic prophase","type":"exact"},{"name":"spindle collapse without elongation during prophase during mitotic cell cycle","type":"related"},{"name":"spindle pole body convergence","type":"exact"}],"termid":"FYPO:0002688"}


id: PBO:0078017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 7","termid":"PBO:0078017"}


id: PBO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p30","termid":"PBO:0071791"}


id: PBO:0079256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 28","termid":"PBO:0079256"}


id: PR:Q10357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper chaperone for superoxide dismutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.04","secondary_identifiers":["UniProtKB:Q10357"],"synonyms":[{"name":"SPAC22E12.04","type":"related"},{"name":"Spom972h-CCS","type":"exact"},{"name":"pccs","type":"related"}],"termid":"PR:Q10357"}


id: PBO:0081162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein pseudogene 1","termid":"PBO:0081162"}


id: GO:0102406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sinapoyl-CoA + 16-hydroxypalmitate = coenzyme A + 16-sinapoyloxypalmitate.","definition_xrefs":["EC:2.3.1.188","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"omega-hydroxypalmitate O-sinapoyl transferase activity","secondary_identifiers":["MetaCyc:RXN-13728","RHEA:26470"],"termid":"GO:0102406"}


id: PBO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA40 pseudogene 1","termid":"PBO:0110040"}


id: GO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TSC1-TSC2 complex.","definition_xrefs":["PMID:28561066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TSC1-TSC2 complex binding","synonyms":[{"name":"tuberin sclerosis complex binding","type":"exact"},{"name":"tuberin-hamartin complex binding","type":"exact"}],"termid":"GO:0062078"}


id: PBO:0061148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 1","termid":"PBO:0061148"}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: PBO:0049218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 2","termid":"PBO:0049218"}


id: PBO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate dehydrogenase (predicted)","termid":"PBO:0004005"}


id: GO:0006116
data:
  {"annotated_genes":["SJAG_00409","SJAG_04152","SJAG_01012","SJAG_01539"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89565,92360,102308,108777],"is_not":false,"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADH, to the oxidized form, NAD+.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH metabolic process","termid":"GO:0006734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_01539":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"NADH oxidation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) dehydrogenation","type":"exact"},{"name":"NAD (reduced) oxidation","type":"exact"},{"name":"NADH dehydrogenation","type":"exact"},{"name":"reduced NAD dehydrogenation","type":"exact"},{"name":"reduced NAD oxidation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide dehydrogenation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide oxidation","type":"exact"}],"termid":"GO:0006116","terms_by_termid":{"GO:0006116":null}}


id: GO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain (3S)-3-hydroxy fatty acyl-CoA + NAD+ = a long-chain 3-oxo-fatty acyl-CoA + H+ + NADH. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["EC:1.1.1.211","GOC:pde","RHEA:52656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydrogenase activity","termid":"GO:0003857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"long-chain-3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.211-RXN"],"synonyms":[{"name":"LCHAD","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"long-chain 3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"long-chain-(S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0016509"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: PBO:0073443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich pseudogene 1","termid":"PBO:0073443"}


id: GO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methylgalactoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methylgalactoside is a compound in which the H of the OH group on carbon-1 of galactose is replaced by a methyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"methylgalactoside transport","termid":"GO:0015765"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: FYPO:0001014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane organization during nitrogen starvation","synonyms":[{"name":"abnormal cellular membrane organization during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organisation during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organization during nitrogen depletion","type":"exact"},{"name":"abnormal membrane organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001014"}


id: PBO:0055402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2832","termid":"PBO:0055402"}


id: GO:0038084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF signaling","type":"exact"},{"name":"VEGF-activated signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038084"}


id: GO:0005889
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses hydrogen:potassium-exchanging ATPase activity; characterized in animal cells, where it maintains ionic gradients of K+ at the expense of ATP hydrolysis; The complex contains two obligatory subunits, the catalytic alpha subunit and a glycosylated beta subunit; two additional subunits, gamma and channel-inducing factor (CHIF), may also be present.","definition_xrefs":["PMID:11756431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"potassium:proton exchanging ATPase complex","synonyms":[{"name":"hydrogen/potassium-exchanging ATPase complex","type":"exact"},{"name":"hydrogen:potassium-exchanging ATPase complex","type":"exact"},{"name":"proton pump","type":"broad"}],"termid":"GO:0005889"}


id: PBO:0084302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-binding protein; involved in targeting cytoplasmic SRP-independent proteins to the ER; contains a CSL Zn finger and a DnaJ-domain; involved in diphthamide biosynthesis; ortholog human Dph4","termid":"PBO:0084302"}


id: PBO:0109607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A15","termid":"PBO:0109607"}


id: CHEBI:28187
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-(hydroxymethyl)serine","termid":"CHEBI:28187"}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: PBO:0083722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I subunit required to stabilize ESCRT-I core complex oligomers; the ESCRT-I core complex (Stp22p, Vps28p, Srn2p) is involved in ubiquitin-dependent sorting of proteins into the endosome; deletion mutant is sensitive to rapamycin and nystatin","termid":"PBO:0083722"}


id: PBO:0082795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in pre-mRNA splicing via spliceosome; also required for pre-5S rRNA processing and may act in concert with Rnh70p; has homology to human SART-1","termid":"PBO:0082795"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: GO:0034711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an inhibin monomer, any of the polypeptides that combine to form activin and inhibin dimers.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inhibin binding","secondary_identifiers":["GO:0034712","GO:0048186","GO:0048187"],"synonyms":[{"name":"inhibin alpha binding","type":"narrow"},{"name":"inhibin beta-A binding","type":"narrow"},{"name":"inhibin beta-B binding","type":"narrow"},{"name":"inhibin monomer binding","type":"exact"}],"termid":"GO:0034711"}


id: PBO:0079666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 14","termid":"PBO:0079666"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: GO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid enters the host nuclear pore complex (NPC) but remains attached to the pore on the nuclear side. The capsid then disassembles, releasing the viral genome into the nucleoplasm.","definition_xrefs":["VZ:989","PMID:22929056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of viral genome into host nucleus via retainment of capsid in nuclear pore complex and release of genome into nucleoplasm","synonyms":[{"name":"entry of viral genome into host nucleus via attachment of capsid to nuclear pore complex and release of genome into nucleoplasm","type":"exact"}],"termid":"GO:0075508"}


id: PBO:0041493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 43","termid":"PBO:0041493"}


id: PBO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human aprataxin homolog, involved in DNA repair (predicted)","termid":"PBO:0005710"}


id: PBO:0074512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A4","termid":"PBO:0074512"}


id: GO:0005549
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005550"}]},"cv_name":"molecular_function","definition":"Binding to an odorant, any substance capable of stimulating the sense of smell.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"odorant binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005549","terms_by_termid":{"GO:0005550":null}}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: SO:1000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000095 sequence_variant_causing_nonconservative_amino_acid_substitution (obsolete SO:1000095)","synonyms":[{"name":"mutation causing nonconservative amino acid substitution","type":"related"},{"name":"sequence variant causing nonconservative amino acid substitution","type":"exact"}],"termid":"SO:1000095"}


id: PATO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks all parts of type","secondary_identifiers":["OBO_REL:lacks_part","PATO:0001557"],"synonyms":[{"name":"lacks all physical parts of type","type":"exact"}],"termid":"PATO:0002000"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0028078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles_with_abolished_sister_chromatid_separation","termid":"PBO:0028078"}


id: FYPO:0002513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein palmitoylation during meiosis","synonyms":[{"name":"increased protein palmitoylation during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002513"}


id: PBO:0028561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_phleomycin","termid":"PBO:0028561"}


id: GO:0008380
data:
  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id: PBO:0083883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase and cupric reductase; reduces siderophore-bound iron and oxidized copper prior to uptake by transporters; expression induced by low iron levels but not by low copper levels","termid":"PBO:0083883"}


id: PBO:0026803
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026803"}


id: PBO:0071680
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 12","termid":"PBO:0071680"}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: FYPO:0002703
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in autophagosomes is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level in autophagosome","synonyms":[{"name":"increased autophagosomal protein level during vegetative growth","type":"exact"},{"name":"increased protein level in autophagic vacuole during vegetative growth","type":"exact"},{"name":"increased protein level in autophagosome during mitotic cell cycle","type":"related"},{"name":"increased protein level in autophagosome during vegetative growth","type":"exact"},{"name":"protein accumulation in autophagosomes","type":"exact"}],"termid":"FYPO:0002703"}


id: PBO:0077598
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11A","termid":"PBO:0077598"}


id: GO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucarate, the D-enantiomer of glucarate. D-glucarate is derived from either D-glucose or L-gulose.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-glucarate metabolic process","synonyms":[{"name":"D-glucarate metabolism","type":"exact"},{"name":"saccharate metabolic process","type":"exact"},{"name":"saccharate metabolism","type":"exact"}],"termid":"GO:0042836"}


id: GO:0050001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + D-glutamate.","definition_xrefs":["EC:3.5.1.35","MetaCyc:D-GLUTAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"D-glutaminase activity","secondary_identifiers":["RHEA:22840"],"synonyms":[{"name":"D-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050001"}


id: GO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diphosphoglycerate (DPG) + ATP = cyclic 2,3-diphosphoglycerate (cDPG) + ADP + phosphate.","definition_xrefs":["PMID:8320225","PMID:9811660","PMID:2226838","GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"cyclic 2,3-diphosphoglycerate synthetase activity","synonyms":[{"name":"CPGS activity","type":"exact"},{"name":"cDPGS activity","type":"exact"}],"termid":"GO:0036356"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: PBO:0041559
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 53","termid":"PBO:0041559"}


id: PBO:0070507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 6","termid":"PBO:0070507"}


id: PBO:0003278
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1","termid":"PBO:0003278"}


id: FYPO:0008055
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a Glc2Man9GlcNAc2 oligosaccharide glucosidase activity is decreased.","definition_xrefs":["PMID:23609449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased Glc2Man9GlcNAc2 oligosaccharide glucosidase activity","termid":"FYPO:0008055"}


id: GO:1901864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsorubin.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY-5174","UniPathway:UPA00807","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsorubin metabolic process","synonyms":[{"name":"capsorubin metabolism","type":"exact"}],"termid":"GO:1901864"}


id: GO:1990009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cell.","definition_xrefs":["PMID:24664675","GOC:mtg_apoptosis","PMID:15558487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cell apoptotic process","secondary_identifiers":["GO:0046674"],"synonyms":[{"name":"induction of retinal programmed cell death","type":"related"}],"termid":"GO:1990009"}


id: PBO:0074837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31B","termid":"PBO:0074837"}


id: GO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a chondrocyte, where growth contributes to the progression of the chondrocyte over time.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte hypertrophy","termid":"GO:0003415"}


id: PBO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglucosaminyltransferase (predicted)","termid":"PBO:0000170"}


id: GO:0038136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors ERBB3 and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["Reactome:R-HSA-1977958","GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB3-ERBB4 signaling pathway","synonyms":[{"name":"ERBB3-ERBB4 signalling pathway","type":"exact"},{"name":"HER3-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038136"}


id: PBO:0079738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 4","termid":"PBO:0079738"}


id: GO:0052907
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90803],"is_not":false,"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(1618) in 23S rRNA.","definition_xrefs":["EC:2.1.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (adenine(1618)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07232","RHEA:16497","MetaCyc:RXN-11596"],"synonyms":[{"name":"M(6)A(1618) activity","type":"broad"},{"name":"rRNA large subunit methyltransferase F activity","type":"related"}],"termid":"GO:0052907","terms_by_termid":{"GO:0052907":null}}


id: PBO:0062371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 10","termid":"PBO:0062371"}


id: GO:1904704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GO_REF:0000058","PMID:26412237","GOC:bc","GOC:TermGenie","GOC:aruk","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"positively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to adherens junction","synonyms":[{"name":"activation of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"positive regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:1904704"}


id: PBO:0028256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ornithine_carbamoyltransferase_activity","termid":"PBO:0028256"}


id: PBO:0090849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5","termid":"PBO:0090849"}


id: PBO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.49","termid":"PBO:0000987"}


id: PBO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 36","termid":"PBO:0070570"}


id: GO:0009727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ethylene (ethene) stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of ethylene stimulus","synonyms":[{"name":"detection of ethene stimulus","type":"exact"},{"name":"perception of ethene stimulus","type":"related"},{"name":"perception of ethylene stimulus","type":"related"}],"termid":"GO:0009727"}


id: GO:1900157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"}


id: GO:0099528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","GOC:bf","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity","type":"exact"}],"termid":"GO:0099528"}


id: PBO:0067542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 688, pseudogene","termid":"PBO:0067542"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglutarylation","termid":"GO:0061698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deglutarylation","termid":"GO:0061699"}


id: FYPO:0002337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location, is elongated, and is inviable.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"elongated inviable vegetative cell, with mislocalized mononucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"inviable elongated mononucleate cell with displaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with asymmetrically localized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized nucleus","type":"exact"}],"termid":"FYPO:0002337"}


id: GO:0047770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + acceptor + H2O = a carboxylate + reduced acceptor.","definition_xrefs":["MetaCyc:CARBOXYLATE-REDUCTASE-RXN","EC:1.2.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carboxylate reductase activity","synonyms":[{"name":"aldehyde:(acceptor) oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase activity","type":"related"},{"name":"carboxylic acid reductase activity","type":"related"}],"termid":"GO:0047770"}


id: PBO:0043307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1","termid":"PBO:0043307"}


id: PBO:0082986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; protein abundance increases in response to DNA replication stress","termid":"PBO:0082986"}


id: FYPO:0008181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain phosphorylated serine 5 is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD Ser5-P binding","termid":"FYPO:0008181"}


id: PBO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene","termid":"PBO:0045218"}


id: PR:O13600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sws1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM domain-containing protein sws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.06","synonyms":[{"name":"SWIM domain-containing and srs2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sws1","type":"exact"}],"termid":"PR:O13600"}


id: GO:1901268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephalosporin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00172","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalosporin biosynthetic process","termid":"GO:0043646"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cephalosporin C biosynthetic process","synonyms":[{"name":"cephalosporin C anabolism","type":"exact"},{"name":"cephalosporin C biosynthesis","type":"exact"},{"name":"cephalosporin C formation","type":"exact"},{"name":"cephalosporin C synthesis","type":"exact"}],"termid":"GO:1901268"}


id: PBO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 49","termid":"PBO:0080088"}


id: PBO:0071657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37","termid":"PBO:0071657"}


id: GO:0006658
data:
  {"annotated_genes":["SJAG_03076","SJAG_01233","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97130,110648],"is_not":false,"summary":null,"term":"GO:0006658"},{"annotations":[110647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[89506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_02100":null,"SJAG_03076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylserine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine metabolism","type":"exact"}],"termid":"GO:0006658","terms_by_termid":{"GO:0006658":null,"GO:0006659":null,"GO:0006660":null}}


id: PBO:0013767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase ipp1 (predicted)","termid":"PBO:0013767"}


id: PBO:0086134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa2p and possibly Iba57p; isa1 deletion causes loss of mitochondrial DNA and respiratory deficiency; depletion reduces growth on nonfermentable carbon sources; functional ortholog of bacterial A-type ISC proteins; human ISCA1 can complement isa1 null mutant","termid":"PBO:0086134"}


id: FYPO:0006147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during a cellular response to copper ion starvation during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006147"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: GO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a myeloid leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte activation","synonyms":[{"name":"myeloid leucocyte activation","type":"exact"}],"termid":"GO:0002274"}


id: PBO:0089555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3","termid":"PBO:0089555"}


id: FYPO:0006948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during glucose starvation","synonyms":[{"name":"normal cellular protein level during glucose starvation","type":"exact"},{"name":"normal protein accumulation during glucose starvation","type":"related"},{"name":"normal protein level during glucose depletion","type":"exact"},{"name":"normal protein level during glucose deprivation","type":"exact"}],"termid":"FYPO:0006948"}


id: PBO:0043829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF1 pseudogene 2","termid":"PBO:0043829"}


id: GO:1902498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:24069405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein autoubiquitination","synonyms":[{"name":"regulation of protein auto-ubiquitination","type":"exact"},{"name":"regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"regulation of protein autoubiquitinylation","type":"exact"},{"name":"regulation of protein self-ubiquitination","type":"exact"},{"name":"regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902498"}


id: PBO:0084069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in regulation of cell proliferation; localized to the plasma membrane; activated by increased levels of glycolysis intermediate fructose-1,6-bisphosphate; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication","termid":"PBO:0084069"}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_02795","SJAG_02246","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95533,92500,93944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0061493":null}}


id: GO:0120203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a rod photoreceptor cell disc membrane.","definition_xrefs":["PMID:19501669","PMID:6771304","GOC:pde","GOC:krc","PMID:26574505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"rod photoreceptor outer segment","termid":"GO:0120200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod photoreceptor disc lumen","termid":"GO:0120203"}


id: FYPO:0000026
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115245],"is_not":false,"summary":null,"term":"FYPO:0000026"},{"annotations":[115310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_04280":null},"genotype_count":2,"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0005568","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell polarity","references_by_uniquename":{"PMID:30664646":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_00409"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta"],"synonyms":[{"name":"abnormal cell polarity during mitotic cell cycle","type":"related"},{"name":"abnormal cell polarity during vegetative growth","type":"exact"},{"name":"abnormal cell polarity process during vegetative growth","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during vegetative growth","type":"exact"},{"name":"cell polarity defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000026","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0061249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 1","termid":"PBO:0061249"}


id: PBO:0049131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 2","termid":"PBO:0049131"}


id: GO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inositol diphosphate tetrakisphosphate = ADP + inositol bisdiphosphate trisphosphate.","definition_xrefs":["PMID:10827188","PMID:11502751","PMID:18355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-1855230","Reactome:R-HSA-1855193"],"termid":"GO:0052839"}


id: GO:0007385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the abdominal segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, trunk","termid":"GO:0035292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, abdomen","termid":"GO:0007385"}


