# terms

id: PBO:0083595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; almost completely overlaps YNL090W/RHO2 which encodes a small GTPase of the Rho/Rac subfamily of Ras-like proteins","termid":"PBO:0083595"}


id: PBO:0083455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene GIM5/YML094W; deletion confers sensitivity to GSAO","termid":"PBO:0083455"}


id: PBO:0086498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs","termid":"PBO:0086498"}


id: PBO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member R","termid":"PBO:0048921"}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: PBO:0004362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbrin","termid":"PBO:0004362"}


id: PBO:0074768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3B-1","termid":"PBO:0074768"}


id: RO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"RO:0002018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","termid":"RO:0002017"}


id: PBO:0080552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 11","termid":"PBO:0080552"}


id: PBO:0048770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEM interacting protein","termid":"PBO:0048770"}


id: GO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The host cell cytoplasm situated near, or occurring around, the host nucleus.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell perinuclear region of cytoplasm","termid":"GO:0044220"}


id: PBO:0080858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog A, membrane trafficking protein","termid":"PBO:0080858"}


id: PBO:0029819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_elongated_cells_(obsolete_FYPO:0002418)","termid":"PBO:0029819"}


id: SO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PCR product obtained by applying the AFLP technique, based on a restriction enzyme digestion of genomic DNA and an amplification of the resulting fragments.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PCR_product","termid":"SO:0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism"],"synonyms":[{"name":"AFLP","type":"exact"},{"name":"AFLP fragment","type":"exact"},{"name":"AFLP-PCR","type":"exact"},{"name":"amplified fragment length polymorphism","type":"exact"},{"name":"amplified fragment length polymorphism PCR","type":"exact"}],"termid":"SO:0001830"}


id: GO:0034957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-nitrophenol + 2 NADH + 2 H+ = 3-hydroxyaminophenol + 2 NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-nitrophenol nitroreductase activity","termid":"GO:0034957"}


id: PBO:0064916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 5","termid":"PBO:0064916"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: PBO:0078768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 1-1","termid":"PBO:0078768"}


id: FYPO:0002031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cables is abnormal. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"},{"relation_name":"output_of","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable morphology","synonyms":[{"name":"abnormal actin cable morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable morphology during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable morphology","type":"exact"},{"name":"disorganized actin cables","type":"exact"}],"termid":"FYPO:0002031"}


id: PBO:0090950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7","termid":"PBO:0090950"}


id: PBO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ATP:ADP antiporter, calcium binding subfamily (predicted)","termid":"PBO:0034769"}


id: PBO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia","termid":"PBO:0001866"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: PBO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p13)","termid":"PBO:0047927"}


id: PBO:0052834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-4","termid":"PBO:0052834"}


id: PATO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of vibration, as perceived by the sense of hearing.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_quality"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound quality","termid":"PATO:0001519"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: GO:0010744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:tb","GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage derived foam cell differentiation","termid":"GO:0010744"}


id: PBO:0026696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026696"}


id: PBO:0029461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_morphology","termid":"PBO:0029461"}


id: PBO:0053710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 919","termid":"PBO:0053710"}


id: PBO:0080856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES proto-oncogene 1, Src family tyrosine kinase","termid":"PBO:0080856"}


id: PBO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 15","termid":"PBO:0071820"}


id: SO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes gain of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_gain_of_function_variant","synonyms":[{"name":"polypeptide gain of function variant","type":"exact"}],"termid":"SO:0001557"}


id: PBO:0018202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transmembrane transporter (predicted)","termid":"PBO:0018202"}


id: PBO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1 (predicted)","termid":"PBO:0036372"}


id: PBO:0052553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor D1","termid":"PBO:0052553"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: PBO:0081674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 595","termid":"PBO:0081674"}


id: PBO:0085498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein adaptor between Myo4p and the She2p-mRNA complex; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; also required for cortical ER inheritance","termid":"PBO:0085498"}


id: PATO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000173 function (obsolete PATO:0000173)","termid":"PATO:0000173"}


id: PBO:0030217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_nutrient","termid":"PBO:0030217"}


id: FYPO:0003184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cytoskeleton during vegetative growth","synonyms":[{"name":"normal protein localisation to cytoskeleton during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003184"}


id: FYPO:0001956
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115499],"is_not":false,"summary":null,"term":"FYPO:0001956"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spherical cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"orb","type":"exact"}],"termid":"FYPO:0001956","terms_by_termid":{"FYPO:0001956":null}}


id: PBO:0079699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like domain containing CTD phosphatase 1","termid":"PBO:0079699"}


id: PBO:0014300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific protein","termid":"PBO:0014300"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: GO:0046320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of fatty acid oxidation","termid":"GO:0046320"}


id: PBO:0028890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube","termid":"PBO:0028890"}


id: PBO:0044973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX9 antisense RNA 1","termid":"PBO:0044973"}


id: GO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 = NAD+ + OH- + 4-sulfobenzyl alcohol.","definition_xrefs":["RHEA:51024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"toluene-sulfonate methyl-monooxygenase activity","secondary_identifiers":["MetaCyc:TSMOS-RXN","UM-BBD_reactionID:r0290"],"synonyms":[{"name":"toluene-sulphonate methyl-monooxygenase activity","type":"exact"}],"termid":"GO:0018652"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: GO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.","definition_xrefs":["EC:3.2.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase activity","secondary_identifiers":["Reactome:R-HSA-5651828","Reactome:R-HSA-8952903","MetaCyc:3.2.1.143-RXN","RHEA:52216"],"termid":"GO:0004649"}


id: PBO:0089496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","termid":"PBO:0089496"}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: PBO:0086327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to P-type ATPase sodium pumps; member of the Na+ efflux ATPase family","termid":"PBO:0086327"}


id: PBO:0063846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase inhibitor 16","termid":"PBO:0063846"}


id: GO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090012)","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090012"}


id: PBO:0002670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.2","termid":"PBO:0002670"}


id: GO:1900997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzene.","definition_xrefs":["UniPathway:UPA00272","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene biosynthetic process","synonyms":[{"name":"benzene anabolism","type":"exact"},{"name":"benzene biosynthesis","type":"exact"},{"name":"benzene formation","type":"exact"},{"name":"benzene synthesis","type":"exact"}],"termid":"GO:1900997"}


id: PBO:0068480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 61, pseudogene","termid":"PBO:0068480"}


id: FYPO:0002471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002471"}


id: GO:0021768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus accumbens development","synonyms":[{"name":"accumbens nucleus development","type":"exact"},{"name":"ventral striatum development","type":"broad"}],"termid":"GO:0021768"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: PBO:0053152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 1","termid":"PBO:0053152"}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: GO:0032491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of fungal origin is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of fungal origin","termid":"GO:0002238"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of fungal origin","synonyms":[{"name":"detection of fungal associated molecule","type":"exact"},{"name":"detection of fungus associated molecule","type":"exact"}],"termid":"GO:0032491"}


id: FYPO:0004225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: GO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye pigmentation","termid":"GO:0048076"}


id: GO:0017050
data:
  {"annotated_genes":["SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93322],"is_not":false,"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP.","definition_xrefs":["MetaCyc:RXN3DJ-11417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"D-erythro-sphingosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5218845","Reactome:R-HSA-9625814","RHEA:35847","EC:2.7.1.91"],"synonyms":[{"name":"sphingosine kinase activity","type":"exact"}],"termid":"GO:0017050","terms_by_termid":{"GO:0017050":null}}


id: GO:0052720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages immediately 5' to an apurinic/apyrimidinic (AP; also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"class II DNA-(apurinic or apyrimidinic site) endonuclease activity","secondary_identifiers":["GO:0140079"],"synonyms":[{"name":"class II DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0052720"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04369","PANTHER:PTHR13889:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: GO:0016002
data:
  {"annotated_genes":["SJAG_01693","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113477,83206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + acceptor + 3 H2O = sulfite + reduced acceptor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sulfite reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"assimilatory sulfite reductase activity","type":"exact"},{"name":"assimilatory-type sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:(acceptor) oxidoreductase activity","type":"exact"},{"name":"hydrogen-sulfide:acceptor oxidoreductase activity","type":"exact"},{"name":"sulphite reductase activity","type":"exact"}],"termid":"GO:0016002","terms_by_termid":{"GO:0004783":null}}


id: GO:0019290
data:
  {"annotated_genes":["SJAG_04032","SJAG_04031","SJAG_00469","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101173],"is_not":false,"summary":null,"term":"GO:0019290"},{"annotations":[89693,89685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[89648],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["PMID:20376388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031178","GO:0031180"],"synonyms":[{"name":"siderochrome biosynthesis","type":"narrow"},{"name":"siderochrome biosynthetic process","type":"narrow"},{"name":"siderophore anabolism","type":"exact"},{"name":"siderophore biosynthesis","type":"exact"},{"name":"siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"siderophore formation","type":"exact"},{"name":"siderophore synthesis","type":"exact"}],"termid":"GO:0019290","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:1905569":null}}


id: PBO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_glutamate_level","termid":"PBO:0030593"}


id: GO:0035452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid membrane","synonyms":[{"name":"extrinsic to plastid membrane","type":"narrow"},{"name":"peripheral to plastid membrane","type":"exact"}],"termid":"GO:0035452"}


id: PBO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR4A1 antisense RNA","termid":"PBO:0061450"}


id: GO:0010635
data:
  {"annotated_genes":["SJAG_00855","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102257,97770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010635","terms_by_termid":{"GO:0010637":null}}


id: FYPO:0004179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which small aggregates of misfolded protein fuse into larger aggregates to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24936793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein aggregate fusion","synonyms":[{"name":"decreased protein aggregate fusion during mitotic cell cycle","type":"related"},{"name":"decreased protein aggregate fusion during vegetative growth","type":"exact"},{"name":"reduced protein aggregate fusion","type":"exact"}],"termid":"FYPO:0004179"}


id: PBO:0109969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery iron sulphur cluster to apoprotein adaptor Mms19","termid":"PBO:0109969"}


id: SO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of mitochondria derived sequences.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_contig","synonyms":[{"name":"mitochondrial contig","type":"exact"}],"termid":"SO:0001921"}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: PBO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Prr1","termid":"PBO:0002167"}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: FYPO:0002673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing torin1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on torin1","synonyms":[{"name":"normal cell population growth in presence of torin1","type":"exact"},{"name":"normal cell population growth on torin1","type":"exact"},{"name":"normal cellular response to torin1","type":"related"},{"name":"normal growth on torin 1","type":"exact"},{"name":"normal vegetative cell population growth on torin1","type":"exact"}],"termid":"FYPO:0002673"}


id: MOD:01932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two lysine residues with a carbon-nitrogen bond to form L-lysinonorleucine..","definition_xrefs":["PubMed:5817620","RESID:AA0586","PubMed:6030254","PubMed:5879466","PubMed:5117030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinonorleucine","synonyms":[{"name":"(2S)-2-amino-6-([(5S)-5-amino-5-carboxypentyl]amino)hexanoic acid","type":"exact"},{"name":"(2S,2'S)-6,6'-iminobis(2-aminohexanoic acid)","type":"exact"},{"name":"6-(N6-L-lysino)-L-norleucine","type":"exact"},{"name":"L-lysinonorleucine","type":"exact"},{"name":"N6-[(5S)-5-amino-5-carboxypentyl]-L-lysine","type":"exact"},{"name":"lysinonorleucine","type":"exact"},{"name":"lysinorleucine [misspelling]","type":"exact"},{"name":"lysylnorleucine","type":"exact"}],"termid":"MOD:01932"}


id: PBO:0084780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peripheral inner membrane protein; contains a FAD cofactor in a domain exposed in the intermembrane space; exhibits redox activity in vitro; likely participates in ligation of heme to acytochromes c and c1 (Cyc1p and Cyt1p)","termid":"PBO:0084780"}


id: GO:0009209
data:
  {"annotated_genes":["SJAG_05024","SJAG_03708","SJAG_00964","SJAG_02887","SJAG_00412","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[95758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[88523,110889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[95760,102328,88991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009209","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: MOD:01364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#S","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site S","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01364"}


id: GO:0102853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-18:1-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:2-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-18:1-sn-glycerol-3-phosphocholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8320"],"termid":"GO:0102853"}


id: GO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 7.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 7 signaling pathway","synonyms":[{"name":"TLR7 signaling pathway","type":"exact"},{"name":"toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034154"}


id: PBO:0063197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 19","termid":"PBO:0063197"}


id: PR:O74371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C32F12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.07c","synonyms":[{"name":"Spom972h-SPBC32F12.07c","type":"exact"}],"termid":"PR:O74371"}


id: GO:0010971
data:
  {"annotated_genes":["SJAG_00214","SJAG_00117","SJAG_03486","SJAG_02592","SJAG_01456","SJAG_00883","SJAG_01901","SJAG_04332","SJAG_03067","SJAG_00256","SJAG_03309","SJAG_03602","SJAG_02342","SJAG_04486","SJAG_04597","SJAG_03592","SJAG_04140","SJAG_01805","SJAG_01837","SJAG_01000","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83482,83491,87219,87635,89387,89957,89997,90135,91954,94113,94683,97481,99251,103055,104419,106211,107079,112488,112680],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[97102,83286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mtg_cell_cycle","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle G2/M phase transition","termid":"GO:1902751"},{"relation_name":"positively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031662"],"synonyms":[{"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle","type":"related"},{"name":"positive regulation of mitotic entry","type":"exact"}],"termid":"GO:0010971","terms_by_termid":{"GO:0010971":null,"GO:1905287":null}}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: GO:1900245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MDA-5 signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of MDA-5 signaling pathway","termid":"GO:0039533"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MDA-5 signaling pathway","synonyms":[{"name":"activation of IFIH1 signaling pathway","type":"narrow"},{"name":"activation of MDA-5 signaling pathway","type":"narrow"},{"name":"activation of MDA5 signaling pathway","type":"narrow"},{"name":"activation of melanoma differentiation-associated gene 5 signaling pathway","type":"narrow"},{"name":"positive regulation of IFIH1 signaling pathway","type":"exact"},{"name":"positive regulation of MDA-5 signalling pathway","type":"exact"},{"name":"positive regulation of MDA5 signaling pathway","type":"narrow"},{"name":"positive regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up-regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up-regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up-regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up-regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"upregulation of IFIH1 signaling pathway","type":"exact"},{"name":"upregulation of MDA-5 signaling pathway","type":"exact"},{"name":"upregulation of MDA5 signaling pathway","type":"narrow"},{"name":"upregulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:1900245"}


id: PBO:0040598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 2","termid":"PBO:0040598"}


id: PBO:0011109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome remodeling protein Spt6","termid":"PBO:0011109"}


id: GO:0140854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-19 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34052656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-19-mediated signaling pathway","synonyms":[{"name":"IL19-mediated signalling pathway","type":"exact"}],"termid":"GO:0140854"}


id: GO:0070303
data:
  {"annotated_genes":["SJAG_01114","SJAG_04825","SJAG_02392","SJAG_05000","SJAG_03263","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91472,114306,99572,102861,103441,95124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"down-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"downregulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"inhibition of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"negative regulation of SAPK signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070303","terms_by_termid":{"GO:1903138":null}}


id: GO:0035022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rac protein signal transduction","synonyms":[{"name":"activation of Rac protein signal transduction","type":"narrow"},{"name":"stimulation of Rac protein signal transduction","type":"narrow"},{"name":"up regulation of Rac protein signal transduction","type":"exact"},{"name":"up-regulation of Rac protein signal transduction","type":"exact"},{"name":"upregulation of Rac protein signal transduction","type":"exact"}],"termid":"GO:0035022"}


id: PBO:0074222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 1","termid":"PBO:0074222"}


id: GO:1903494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["PMID:3585228","GOC:TermGenie","GOC:mr","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dehydroepiandrosterone","termid":"GO:1903494"}


id: GO:0022857
data:
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activity","type":"related"}],"termid":"GO:0022857","terms_by_termid":{"GO:0000006":null,"GO:0000007":null,"GO:0000064":null,"GO:0000095":null,"GO:0000297":null,"GO:0001406":null,"GO:0001409":null,"GO:0004129":null,"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005315":null,"GO:0005351":null,"GO:0005354":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005375":null,"GO:0005381":null,"GO:0005384":null,"GO:0005385":null,"GO:0005388":null,"GO:0005432":null,"GO:0005452":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008121":null,"GO:0008137":null,"GO:0008271":null,"GO:0008308":null,"GO:0008320":null,"GO:0008331":null,"GO:0008381":null,"GO:0008506":null,"GO:0008509":null,"GO:0008517":null,"GO:0008519":null,"GO:0008521":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0010486":null,"GO:0015075":null,"GO:0015079":null,"GO:0015085":null,"GO:0015086":null,"GO:0015093":null,"GO:0015095":null,"GO:0015116":null,"GO:0015117":null,"GO:0015123":null,"GO:0015127":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015149":null,"GO:0015171":null,"GO:0015174":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015200":null,"GO:0015203":null,"GO:0015204":null,"GO:0015205":null,"GO:0015207":null,"GO:0015208":null,"GO:0015210":null,"GO:0015218":null,"GO:0015220":null,"GO:0015225":null,"GO:0015227":null,"GO:0015228":null,"GO:0015230":null,"GO:0015233":null,"GO:0015234":null,"GO:0015267":null,"GO:0015275":null,"GO:0015295":null,"GO:0015297":null,"GO:0015343":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015398":null,"GO:0015410":null,"GO:0015421":null,"GO:0015439":null,"GO:0015440":null,"GO:0015450":null,"GO:0015489":null,"GO:0015505":null,"GO:0015606":null,"GO:0015662":null,"GO:0019829":null,"GO:0022857":null,"GO:0031925":null,"GO:0031927":null,"GO:0031928":null,"GO:0033229":null,"GO:0034216":null,"GO:0034634":null,"GO:0034639":null,"GO:0034658":null,"GO:0042626":null,"GO:0042907":null,"GO:0042910":null,"GO:0042937":null,"GO:0043682":null,"GO:0044604":null,"GO:0044750":null,"GO:0046715":null,"GO:0046933":null,"GO:0046943":null,"GO:0046961":null,"GO:0046964":null,"GO:0050833":null,"GO:0051724":null,"GO:0061459":null,"GO:0061840":null,"GO:0071913":null,"GO:0071916":null,"GO:0071917":null,"GO:0080139":null,"GO:0089721":null,"GO:0090422":null,"GO:0097434":null,"GO:0140107":null,"GO:0140108":null,"GO:0140135":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null,"GO:0140987":null,"GO:0170045":null,"GO:1901239":null,"GO:1901584":null,"GO:1901604":null,"GO:1901702":null,"GO:1902557":null,"GO:1903425":null}}


id: PBO:0058061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4281","termid":"PBO:0058061"}


id: PBO:0087743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087743"}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:mah","GOC:bf","MetaCyc:PWY-5436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006790","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: PBO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.4.1","termid":"PBO:0000262"}


id: PBO:0046879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A4, pseudogene","termid":"PBO:0046879"}


id: GO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oskar mRNA translation","synonyms":[{"name":"down regulation of oskar mRNA translation","type":"exact"},{"name":"down-regulation of oskar mRNA translation","type":"exact"},{"name":"downregulation of oskar mRNA translation","type":"exact"},{"name":"inhibition of oskar mRNA translation","type":"narrow"}],"termid":"GO:0007319"}


id: GO:1903797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"positively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of inorganic anion transmembrane transport","synonyms":[{"name":"activation of inorganic anion membrane transport","type":"narrow"},{"name":"activation of inorganic anion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane inorganic anion transport","type":"narrow"},{"name":"positive regulation of inorganic anion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up regulation of inorganic anion membrane transport","type":"exact"},{"name":"up regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up-regulation of inorganic anion membrane transport","type":"exact"},{"name":"up-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"upregulation of inorganic anion membrane transport","type":"exact"},{"name":"upregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903797"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: SO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for U3_snoRNA. U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_snoRNA_gene","synonyms":[{"name":"small nucleolar RNA U3 gene, snoRNA U3 gene, U3 small nucleolar RNA gene, U3 snoRNA gene","type":"exact"}],"termid":"SO:0002378"}


id: GO:0047039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + scytalone = NADPH + H+ + 1,3,6,8-naphthalenetetrol.","definition_xrefs":["EC:1.1.1.252","MetaCyc:1.1.1.252-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydroxynaphthalene reductase activity","secondary_identifiers":["RHEA:21908"],"synonyms":[{"name":"T4HN reductase activity","type":"related"},{"name":"scytalone:NADP+ delta5-oxidoreductase activity","type":"related"}],"termid":"GO:0047039"}


id: GO:0019988
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92669],"is_not":false,"summary":null,"term":"GO:0019988"}]},"cv_name":"biological_process","definition":"The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"charged-tRNA amino acid modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030630"],"synonyms":[{"name":"charged tRNA amino acid modification","type":"exact"},{"name":"charged tRNA modification","type":"exact"},{"name":"charged-tRNA modification","type":"related"},{"name":"pre-translational amino acid modification","type":"exact"},{"name":"pre-translational protein modification","type":"exact"},{"name":"pretranslation protein modification","type":"exact"},{"name":"pretranslational amino acid modification","type":"exact"}],"termid":"GO:0019988","terms_by_termid":{"GO:0019988":null}}


id: PBO:0073637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 24, pseudogene","termid":"PBO:0073637"}


id: GO:0034380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle assembly","synonyms":[{"name":"HDL assembly","type":"exact"}],"termid":"GO:0034380"}


id: PBO:0055595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3031","termid":"PBO:0055595"}


id: GO:0102733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: typhasterol + O2 + a reduced electron acceptor = castasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:17138693","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"typhasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-719"],"termid":"GO:0102733"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["EC:4.2.99.20","RHEA:25597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"},{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"}],"termid":"GO:0070205"}


id: PBO:0028807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028807"}


id: PBO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 51","termid":"PBO:0071210"}


id: GO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyloct-2-enoyl-CoA + H2O = 3-hydroxy-4-methyloctanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-methyloct-2-enoyl-CoA hydratase activity","termid":"GO:0034581"}


id: PR:O14265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10698:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.10","secondary_identifiers":["UniProtKB:O14265"],"synonyms":[{"name":"SPAC7D4.10","type":"related"},{"name":"Spom972h-ATP6V1H","type":"exact"},{"name":"V-ATPase 54 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14265"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: PBO:0013840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative Stress-induced Reductase","termid":"PBO:0013840"}


id: GO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranyl-geranyl diphosphate + H2O = (E,E)-geranyllinalool + diphosphate.","definition_xrefs":["MetaCyc:RXN-10441","PMID:18398052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(E,E)-geranyllinalool synthase activity","secondary_identifiers":["RHEA:38155"],"termid":"GO:0080013"}


id: MOD:00397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group.","definition_xrefs":["PubMed:11510821","Unimod:4","PubMed:11327326","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized residue","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:00397"}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: PBO:0067573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 728, pseudogene","termid":"PBO:0067573"}


id: PBO:0065282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 2","termid":"PBO:0065282"}


id: PBO:0073344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 6","termid":"PBO:0073344"}


id: PBO:0057716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-2","termid":"PBO:0057716"}


id: FYPO:0003947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"normal nonsense-mediated decay","synonyms":[{"name":"normal NMD","type":"exact"},{"name":"normal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"normal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003947"}


id: PBO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 11","termid":"PBO:0044067"}


id: PBO:0069445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 710, pseudogene","termid":"PBO:0069445"}


id: PBO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C2","termid":"PBO:0060239"}


id: PBO:0062541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene","termid":"PBO:0062541"}


id: PBO:0054601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2005","termid":"PBO:0054601"}


id: PBO:0045889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 1","termid":"PBO:0045889"}


id: PBO:0089619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint WD repeat protein Bub3","termid":"PBO:0089619"}


id: PBO:0017656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr2 (predicted)","termid":"PBO:0017656"}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:19376779","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"},{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"}],"termid":"GO:1903783"}


id: PR:O13936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00424","PANTHER:PTHR11125:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.19","secondary_identifiers":["UniProtKB:O13936"],"synonyms":[{"name":"Spom972h-SUPT5H","type":"exact"},{"name":"chromatin elongation factor spt5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13936"}


id: FYPO:0001431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the antibiotic Dio-9 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to Dio-9","synonyms":[{"name":"resistance to DIO 9","type":"exact"},{"name":"resistance to Dio-9 during mitotic cell cycle","type":"related"},{"name":"resistance to Dio-9 during vegetative growth","type":"exact"},{"name":"resistant to Dio-9","type":"exact"}],"termid":"FYPO:0001431"}


id: FYECO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which chloride ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cl ions","synonyms":[{"name":"chloride ions added","type":"exact"}],"termid":"FYECO:0000032"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0069100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 347, pseudogene","termid":"PBO:0069100"}


id: PBO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Cut15","termid":"PBO:0005183"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22291963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: GO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an oenocyte. Oenocytes are large secretory cells found in clusters underlying the epidermis of larval abdominal segments.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oenocyte differentiation","synonyms":[{"name":"oenocyte cell differentiation","type":"exact"}],"termid":"GO:0001742"}


id: FYPO:0008110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of the adenine residue at position 64 in an U6 snRNA molecule is decreased.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"decreased U6 2'-O-snRNA methylation at residue A64","termid":"FYPO:0008110"}


id: GO:1900542
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685","SJAG_04422","SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85154,110980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[111454,107257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[113996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[110981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of purine metabolic process","type":"narrow"},{"name":"regulation of purine metabolism","type":"narrow"},{"name":"regulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900542","terms_by_termid":{"GO:0043456":null,"GO:0045820":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:1904881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24012591","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to hydrogen sulfide","termid":"GO:1904880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen sulfide","synonyms":[{"name":"cellular response to dihydridosulfur","type":"exact"},{"name":"cellular response to sulfane","type":"exact"}],"termid":"GO:1904881"}


id: SO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_frequency","synonyms":[{"name":"variant frequency","type":"exact"}],"termid":"SO:0001763"}


id: GO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dADP catabolic process","synonyms":[{"name":"dADP breakdown","type":"exact"},{"name":"dADP catabolism","type":"exact"},{"name":"dADP degradation","type":"exact"}],"termid":"GO:0046057"}


id: GO:1902792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:2722838","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase complex","termid":"GO:1902792"}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: GO:1904903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT III complex into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:pad","GOC:PARL","PMID:20588296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex disassembly","termid":"GO:1904896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT III complex disassembly","termid":"GO:1904903"}


id: PBO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase (predicted)","termid":"PBO:0000105"}


id: FYPO:0000094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to benomyl. Cells stop growing (and may die) at a concentration of benomyl that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to benomyl","synonyms":[{"name":"hypersensitive to benomyl","type":"exact"},{"name":"sensitive to benomyl during mitotic cell cycle","type":"related"},{"name":"sensitive to benomyl during vegetative growth","type":"exact"},{"name":"sensitive to methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"}],"termid":"FYPO:0000094"}


id: PBO:0057691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1281","termid":"PBO:0057691"}


id: PBO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.8","termid":"PBO:0004524"}


id: PBO:0058035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4256","termid":"PBO:0058035"}


id: PBO:0056947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15a","termid":"PBO:0056947"}


id: PBO:0110023
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Social Distancing Gene","termid":"PBO:0110023"}


id: GO:2000878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligopeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"positively_regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of oligopeptide transport","termid":"GO:2000878"}


id: GO:0140942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl9-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me2.","definition_xrefs":["RHEA:64444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140096","GO:0003824","GO:0008276","GO:0016740"],"is_obsolete":false,"name":"histone H3K9 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.368"],"synonyms":[{"name":"histone H3-K9 dimethylation","type":"broad"},{"name":"histone H3K9 dimethylase activity","type":"exact"},{"name":"histone H3K9 dimethylation","type":"broad"},{"name":"histone H3K9 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140942"}


id: GO:1902286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in dendrite guidance.","definition_xrefs":["GOC:TermGenie","PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"dendrite guidance","termid":"GO:0070983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in dendrite guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in dendritic guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendrite guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendritic guidance","type":"exact"}],"termid":"GO:1902286"}


id: PBO:0076462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1 pseudogene 1","termid":"PBO:0076462"}


id: PBO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member E","termid":"PBO:0060872"}


id: GO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic development","synonyms":[{"name":"down regulation of embryonic development","type":"exact"},{"name":"down-regulation of embryonic development","type":"exact"},{"name":"downregulation of embryonic development","type":"exact"},{"name":"inhibition of embryonic development","type":"narrow"}],"termid":"GO:0045992"}


id: PBO:0069326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 584, pseudogene","termid":"PBO:0069326"}


id: PR:O74383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.08c gene.","definition_xrefs":["UniProtKB:O74383","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.08c","synonyms":[{"name":"Spom972h-SPBC3H7.08c","type":"exact"}],"termid":"PR:O74383"}


id: PBO:0056464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 2","termid":"PBO:0056464"}


id: PBO:0091574
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human HUS1","termid":"PBO:0091574"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: PBO:0080349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 1 pseudogene","termid":"PBO:0080349"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: GO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.","definition_xrefs":["PMID:19837031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}


id: PBO:0056372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1","termid":"PBO:0056372"}


id: PBO:0029437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029437"}


id: FYPO:0003910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of retrotransposon nucleocapsid complexes (also called virus-like particles, VLPs) to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished VLP localization to nucleus during vegetative growth","synonyms":[{"name":"VLP localization to nucleus abolished during vegetative growth","type":"exact"},{"name":"abolished VLP localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization in nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization to nucleus during vegetative growth during mitotic cell cycle","type":"related"},{"name":"abolished retrotransposon nucleocapsid localization to nucleus during vegetative growth","type":"exact"},{"name":"abolished virus-like particle localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0003910"}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: PBO:0034261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulated_by","termid":"PBO:0034261"}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13186:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: PBO:0059603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 15","termid":"PBO:0059603"}


id: GO:0051163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-arabitol metabolic process","synonyms":[{"name":"D-arabitol metabolism","type":"exact"}],"termid":"GO:0051163"}


id: GO:1990745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for endocytic recycling.","definition_xrefs":["PMID:25799061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EARP complex","termid":"GO:1990745"}


id: PR:Q9UTE7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA modification GTPase GTPBP3, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00376","PANTHER:PTHR11649:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA modification GTPase mss1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.05c","secondary_identifiers":["UniProtKB:Q9UTE7"],"synonyms":[{"name":"Spom972h-GTPBP3","type":"exact"}],"termid":"PR:Q9UTE7"}


id: GO:1904175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","GO_REF:0000059","GOC:TermGenie","PMID:24843136"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904175)","synonyms":[{"name":"activation of histone demethylase activity (H3-K4 specific)","type":"narrow"},{"name":"up regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"up-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"upregulation of histone demethylase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:1904175"}


id: PBO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyltransferase Cid1","termid":"PBO:0031894"}


id: PBO:0031454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_vegetative_growth","termid":"PBO:0031454"}


id: GO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of T cell receptor signaling pathway","synonyms":[{"name":"down regulation of T cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"downregulation of T cell receptor signaling pathway","type":"exact"},{"name":"inhibition of T cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of T cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050860"}


id: MOD:01773
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a trimethyllysine residue with secondary loss of a neutral trimethylamine molecular fragment.","definition_xrefs":["PubMed:18688235","PubMed:17205979"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine with neutral loss of trimethylamine","synonyms":[{"name":"dMe3N6Me3+Lys","type":"exact"}],"termid":"MOD:01773"}


id: FYPO:0004235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels vary over the course of the mitotic cell cycle normally (i.e. levels are indistinguishable from wild type at any assayed point). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:21118960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"normal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"normal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"normal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004235"}


id: PBO:0060975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 2","termid":"PBO:0060975"}


id: PBO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter Vht1","termid":"PBO:0014586"}


id: PBO:0088761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1","termid":"PBO:0088761"}


id: PBO:0029518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_shape","termid":"PBO:0029518"}


id: GO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the swim bladder is generated and organized. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder morphogenesis","synonyms":[{"name":"gas bladder morphogenesis","type":"exact"}],"termid":"GO:0048795"}


id: GO:1903220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["PMID:12398416","GO_REF:0000059","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","termid":"GO:1903218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"activation of 'malic' enzyme","type":"related"},{"name":"activation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"activation of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"activation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"activation of NADP-malic enzyme activity","type":"narrow"},{"name":"activation of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"activation of NADP-specific malic enzyme","type":"related"},{"name":"activation of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"positive regulation of 'malic' enzyme","type":"related"},{"name":"positive regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"positive regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"positive regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"positive regulation of NADP-malic enzyme activity","type":"exact"},{"name":"positive regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"positive regulation of NADP-specific malic enzyme","type":"related"},{"name":"positive regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"positive regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up regulation of 'malic' enzyme","type":"related"},{"name":"up regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up regulation of NADP-specific malic enzyme","type":"related"},{"name":"up regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up-regulation of 'malic' enzyme","type":"related"},{"name":"up-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up-regulation of NADP-specific malic enzyme","type":"related"},{"name":"up-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"upregulation of 'malic' enzyme","type":"related"},{"name":"upregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"upregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"upregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"upregulation of NADP-malic enzyme activity","type":"exact"},{"name":"upregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"upregulation of NADP-specific malic enzyme","type":"related"},{"name":"upregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903220"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: GO:0033175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All non-F1 subunits of the chloroplast hydrogen-transporting ATP synthase, including integral and peripheral chloroplast thylakoid membrane proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"chloroplast proton-transporting ATP synthase complex","termid":"GO:0045320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(o)","synonyms":[{"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(0)","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex, coupling factor CF(o)","type":"exact"}],"termid":"GO:0033175"}


id: GO:2000731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase I transcription","termid":"GO:2000730"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"negative regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"negative regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000731"}


id: PBO:0086593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen plus UVA irradiation; not an essential gene; YGR273C has a paralog, YMR295C, that arose from the whole genome duplication","termid":"PBO:0086593"}


id: PBO:0045996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 3","termid":"PBO:0045996"}


id: PBO:0084281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; physically interacts with Kre6p; has a role in the synthesis of beta-1,6-glucan in the cell wall; required for cell viability","termid":"PBO:0084281"}


id: PBO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 18 Y-linked","termid":"PBO:0061828"}


id: PBO:0091111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transmembrane transporter","termid":"PBO:0091111"}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: PR:000027587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:20929775","PMID:11242054","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027587"}


id: PR:O94745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03131","PRO:DNx","PANTHER:PTHR11851:SF49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.12c","secondary_identifiers":["UniProtKB:O94745"],"synonyms":[{"name":"Spom972h-PMPCA","type":"exact"},{"name":"alpha-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94745"}


id: GO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell development","termid":"GO:0072143"}


id: GO:1901214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:TermGenie","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of neuron death (obsolete GO:1901214)","synonyms":[{"name":"regulation of neuron cell death","type":"exact"},{"name":"regulation of neuronal cell death","type":"exact"}],"termid":"GO:1901214"}


id: GO:1902009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:22792315"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of toxin transport (obsolete GO:1902009)","synonyms":[{"name":"activation of toxin transport","type":"narrow"},{"name":"up regulation of toxin transport","type":"exact"},{"name":"up-regulation of toxin transport","type":"exact"},{"name":"upregulation of toxin transport","type":"exact"}],"termid":"GO:1902009"}


id: PBO:0089369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter family","termid":"PBO:0089369"}


id: PBO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCLC antisense RNA 1","termid":"PBO:0048466"}


id: PATO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000742 low enzyme function value (obsolete PATO:0000742)","termid":"PATO:0000742"}


id: PATO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides.","definition_xrefs":["Merriam-Webster:hexagonal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexagonal","termid":"PATO:0002509"}


id: PBO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med11","termid":"PBO:0018238"}


id: _global:has_penetrance
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed penetrance in a population. Penetrance is the proportion of individuals carrying an allele that express a trait associated with the allele.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_penetrance","synonyms":[{"name":"penetrance","type":"exact"}],"termid":"_global:has_penetrance"}


id: PBO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA binding protein involved in CCR4-NOT dependent deadenylation (predicted)","termid":"PBO:0036458"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: PBO:0064538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin B (pseudogene)","termid":"PBO:0064538"}


id: GO:1900058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7891681","GOC:TermGenie","PMID:7601277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of sulfate assimilation","synonyms":[{"name":"regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"regulation of sulphate assimilation","type":"exact"},{"name":"regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900058"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfur incorporation into metallo-sulfur cluster","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: GO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane part (obsolete GO:0044425)","termid":"GO:0044425"}


id: GO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}


id: GO:0002833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to biotic stimulus","synonyms":[{"name":"activation of response to biotic stimulus","type":"narrow"},{"name":"stimulation of response to biotic stimulus","type":"narrow"},{"name":"up regulation of response to biotic stimulus","type":"exact"},{"name":"up-regulation of response to biotic stimulus","type":"exact"},{"name":"upregulation of response to biotic stimulus","type":"exact"}],"termid":"GO:0002833"}


id: PBO:0080956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z-DNA binding protein 1","termid":"PBO:0080956"}


id: PBO:0091304
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript with all introns spliced represents 85% of total mRNA","termid":"PBO:0091304"}


id: PBO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D","termid":"PBO:0046046"}


id: GO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(2-aminoethyl)benzene-1,2-diol + 4-hydroxyphenylacetaldehyde = (S)-norcoclaurine + H2O.","definition_xrefs":["EC:4.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-norcoclaurine synthase activity","secondary_identifiers":["MetaCyc:S-NORLAUDANOSOLINE-SYNTHASE-RXN","GO:0050475","RHEA:16173"],"synonyms":[{"name":"(S)-norlaudanosoline synthase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde hydro-lyase (adding dopamine)","type":"related"},{"name":"4-hydroxyphenylacetaldehyde hydro-lyase [adding dopamine; (S)-norcoclaurine-forming]","type":"related"}],"termid":"GO:0050474"}


id: GO:0102999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 2-hydroxylamino-4,6-dinitrotoluene = 2-hydroxylamino-4,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:2-hydroxylamino-4,6-dinitrotoluene-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9743"],"termid":"GO:0102999"}


id: PBO:0072194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 11","termid":"PBO:0072194"}


id: PBO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 1","termid":"PBO:0046559"}


id: GO:0098976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic transmission that results in an excitatory postsynaptic potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"excitatory chemical synaptic transmission","termid":"GO:0098976"}


id: GO:0033333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin development","termid":"GO:0033333"}


id: PBO:0055664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 1","termid":"PBO:0055664"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: PBO:0038716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 11","termid":"PBO:0038716"}


id: GO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomium over time, from its formation to the mature structure. A stomium is a fissure or pore in the anther lobe through which the pollen is released.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomium development","termid":"GO:0080166"}


id: GO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of large proteins such as globin, casein and denatured serum albumin, in presence of ATP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase La activity (obsolete GO:0008846)","synonyms":[{"name":"ATP-dependent lon proteinase","type":"narrow"},{"name":"ATP-dependent protease La activity","type":"related"},{"name":"ATP-dependent serine proteinase activity","type":"related"},{"name":"Escherichia coli proteinase La","type":"related"},{"name":"Escherichia coli serine proteinase La","type":"related"},{"name":"PIM1 protease activity","type":"related"},{"name":"PIM1 proteinase activity","type":"related"},{"name":"endopeptidase La activity","type":"exact"},{"name":"gene lon protease activity","type":"related"},{"name":"gene lon proteins","type":"related"},{"name":"lon proteinase","type":"narrow"},{"name":"protease La","type":"related"},{"name":"proteinase La","type":"related"},{"name":"serine protease La","type":"related"}],"termid":"GO:0008846"}


id: PATO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other.","definition_xrefs":["biology.lsu:biology.lsu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparse","termid":"PATO:0001609"}


id: PBO:0058930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7i","termid":"PBO:0058930"}


id: PBO:0087829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIB B-related factor; one of three subunits of RNA polymerase III transcription initiation factor TFIIIB, binds TFIIIC and TBP and recruits RNA pol III to promoters, amino-terminal half is homologous to TFIIB; mutations in human homolog are associated with autosomal recessive cerebellar-facial-dental syndrome","termid":"PBO:0087829"}


id: PBO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_structural_organization_of","termid":"PBO:0034241"}


id: PR:Q10340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.19 gene.","definition_xrefs":["UniProtKB:Q10340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C106.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.19","synonyms":[{"name":"Spom972h-SPBC106.19","type":"exact"}],"termid":"PR:Q10340"}


id: PBO:0091449
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0091449"}


id: GO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte differentiation","synonyms":[{"name":"activation of oligodendrocyte differentiation","type":"narrow"},{"name":"stimulation of oligodendrocyte differentiation","type":"narrow"},{"name":"up regulation of oligodendrocyte differentiation","type":"exact"},{"name":"up-regulation of oligodendrocyte differentiation","type":"exact"},{"name":"upregulation of oligodendrocyte differentiation","type":"exact"}],"termid":"GO:0048714"}


id: GO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the regulated release of a neurotransmitter from a cell in its host organism.","definition_xrefs":["PMID:1328520","PMID:7901002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host neurotransmitter secretion","termid":"GO:0044079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated suppression of host neurotransmitter secretion","synonyms":[{"name":"negative regulation by symbiont of host neurotransmitter secretion","type":"exact"}],"termid":"GO:0044762"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_04187","SJAG_03345","SJAG_03025","SJAG_01530","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[88054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[99985,84731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[92166,108700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:34836783","PMID:29779865","PMID:23727094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null}}


id: PBO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by heat shock","termid":"PBO:0001336"}


id: PBO:0040752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B1","termid":"PBO:0040752"}


id: PBO:0061570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal glutamine amidase 1","termid":"PBO:0061570"}


id: PBO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 3","termid":"PBO:0062034"}


id: GO:0043636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bisphenol A, 4,4'-(propane-2,2-diyl)diphenol, a synthetic, aromatic organic compound used as a monomer in the manufacture of polycarbonate plastic and in the manufacture of epoxy resins.","definition_xrefs":["GOC:jl","Wikipedia:Bisphenol_A"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"bisphenol A catabolic process","synonyms":[{"name":"bisphenol-A catabolic process","type":"exact"},{"name":"bisphenol-A catabolism","type":"exact"}],"termid":"GO:0043636"}


id: PBO:0089129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor Fes1","termid":"PBO:0089129"}


id: GO:1903119
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703","SJAG_02831","SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[106675,87837,114636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton.","definition_xrefs":["GOC:TermGenie","PMID:24798735","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02228":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in actin cytoskeleton","type":"exact"},{"name":"protein localisation to actin cytoskeleton","type":"exact"},{"name":"protein localization in actin cytoskeleton","type":"exact"}],"termid":"GO:1903119","terms_by_termid":{"GO:0044379":null,"GO:1904498":null}}


id: PATO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}


id: FYECO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which fluconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fluconazole","termid":"FYECO:0000385"}


id: PBO:0084830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for transamination of isoleucine; but not of valine or leucine; may regulate specificity of branched-chain transaminases Bat1p and Bat2p; induction of expression in response to stress is mediated by a Hog1p-regulated antisense RNA and gene looping; interacts genetically with mitochondrial ribosomal protein genes; MMF1 has a paralog, HMF1, that arose from the whole genome duplication","termid":"PBO:0084830"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: GO:0051920
data:
  {"annotated_genes":["SJAG_03166","SJAG_01216","SJAG_02630","SJAG_00141","SJAG_01199","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101082,113372],"is_not":false,"summary":null,"term":"GO:0051920"},{"annotations":[90810,113374,100811,69980,104684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"},{"annotations":[113375,104685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-dithol + ROOH = [protein]-disulfide + H2O + ROH.","definition_xrefs":["RHEA:10008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peroxiredoxin activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1500804","Reactome:R-HSA-1222431","Reactome:R-HSA-1222755"],"synonyms":[{"name":"PRDX activity","type":"exact"},{"name":"Prx activity","type":"exact"}],"termid":"GO:0051920","terms_by_termid":{"GO:0008379":null,"GO:0051920":null,"GO:0140824":null}}


id: GO:0009312
data:
  {"annotated_genes":["SJAG_01209","SJAG_01531","SJAG_00182","SJAG_01646","SJAG_01862","SJAG_00129","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88912,96776,104751,87338,92157,73602,92785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oligosaccharide anabolism","type":"exact"},{"name":"oligosaccharide biosynthesis","type":"exact"},{"name":"oligosaccharide formation","type":"exact"},{"name":"oligosaccharide synthesis","type":"exact"}],"termid":"GO:0009312","terms_by_termid":{"GO:0005992":null}}


id: PATO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of temperature","synonyms":[{"name":"high variability of temperature","type":"exact"}],"termid":"PATO:0001308"}


id: PBO:0072609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 4","termid":"PBO:0072609"}


id: GO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell costimulation","synonyms":[{"name":"B cell co-stimulation","type":"exact"},{"name":"B lymphocyte co-stimulation","type":"exact"},{"name":"B lymphocyte costimulation","type":"exact"},{"name":"B-cell co-stimulation","type":"exact"},{"name":"B-cell costimulation","type":"exact"},{"name":"B-lymphocyte co-stimulation","type":"exact"},{"name":"B-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031296"}


id: GO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = nitrate + reduced acceptor.","definition_xrefs":["EC:1.7.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrate reductase activity","secondary_identifiers":["RHEA:21068","MetaCyc:NITRATREDUCT-RXN"],"synonyms":[{"name":"nitrate reductase (acceptor)","type":"related"},{"name":"nitrite:(acceptor) oxidoreductase","type":"related"},{"name":"nitrite:acceptor oxidoreductase","type":"related"},{"name":"respiratory nitrate reductase activity","type":"narrow"}],"termid":"GO:0008940"}


id: PBO:0069495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 762, pseudogene","termid":"PBO:0069495"}


id: PBO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 5","termid":"PBO:0045583"}


id: PR:Q10187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.13","synonyms":[{"name":"Spom972h-ucp6","type":"exact"}],"termid":"PR:Q10187"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["UniProtKB:Q10256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: GO:0000429
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102055,109354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000429","terms_by_termid":{"GO:0000433":null}}


id: GO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["PMID:11250167","PMID:11163136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division","synonyms":[{"name":"neuroblast cell division","type":"exact"}],"termid":"GO:0055057"}


id: RO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_preceded_by","termid":"RO:0002087"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: GO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response","termid":"GO:0002673"}


id: GO:0018741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary linear alkyl sulfate ester + H2O = a primary alcohol + H+ + sulfate.","definition_xrefs":["RHEA:67908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"linear primary-alkylsulfatase activity","secondary_identifiers":["EC:3.1.6.21","UM-BBD_reactionID:r0602"],"synonyms":[{"name":"alkyl sulfatase activity","type":"broad"}],"termid":"GO:0018741"}


id: GO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a sodium ion by a neuronal, voltage-insensitive channel that opens when an extracellular proton has been bound by the channel complex.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acid-sensing ion channel activity (obsolete GO:0044736)","synonyms":[{"name":"ASIC activity","type":"exact"}],"termid":"GO:0044736"}


id: PBO:0071726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 24","termid":"PBO:0071726"}


id: PBO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_morphology","termid":"PBO:0031837"}


id: GO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oncostatin-M and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"oncostatin-M receptor activity","termid":"GO:0004924"}


id: MOD:01613
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-diiodo-L-tyrosine.","definition_xrefs":["ChEBI:15768","RESID:AA0510","PubMed:8995307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated tyrosine","termid":"MOD:01140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-diiodo-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3,5-diiodophenyl)propanoic acid","type":"exact"},{"name":"3',5'-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodotyrosine","type":"exact"},{"name":"DIT","type":"exact"},{"name":"MOD_RES Diiodotyrosine","type":"exact"},{"name":"iodogorgoic acid","type":"exact"}],"termid":"MOD:01613"}


id: GO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n, as carried out by individual cells.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular alkene metabolic process","synonyms":[{"name":"alkene metabolism","type":"exact"}],"termid":"GO:0043449"}


id: PBO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1 (predicted)","termid":"PBO:0018115"}


id: PBO:0050448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U like 2","termid":"PBO:0050448"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: GO:1901494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cysteine metabolic process","synonyms":[{"name":"regulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901494"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: GO:0021522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","PMID:11262869","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}


id: PATO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an increased rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accelerated growth","termid":"PATO:0001753"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: PBO:0053284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain and actin binding 1","termid":"PBO:0053284"}


id: GO:0006998
data:
  {"annotated_genes":["SJAG_03783","SJAG_04319","SJAG_01460","SJAG_01467","SJAG_01050","SJAG_03491","SJAG_04489","SJAG_04464","SJAG_05207","SJAG_01356","SJAG_01906","SJAG_01242","SJAG_04271","SJAG_00840","SJAG_01745","SJAG_00810","SJAG_03940","SJAG_03219","SJAG_04883","SJAG_01422","SJAG_03313","SJAG_04972","SJAG_02763","SJAG_00680","SJAG_03891","SJAG_03073","SJAG_03592","SJAG_04509","SJAG_00416","SJAG_04578","SJAG_00900","SJAG_03892","SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87218,96297,99496,106191,106334,108665,115102],"is_not":false,"summary":null,"term":"GO:0006998"},{"annotations":[89421,97153],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[105781,106190,93342,94028,88614,83327],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[106333],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[106883,115220,115097,115484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[98889,115466,115465,99495,91593,93620,96605,102372,83391,115467,115468,86829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99431],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140516"},{"annotations":[114154,86830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[83973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[86945,84533,86831,87439,103556,105597,99217,115135],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[92279],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.","definition_xrefs":["GOC:ems","GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01356":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03073":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear envelope organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope organisation","type":"exact"},{"name":"nuclear envelope organization and biogenesis","type":"related"}],"termid":"GO:0006998","terms_by_termid":{"GO:0006998":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: PBO:0065935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 9","termid":"PBO:0065935"}


id: PBO:0027955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxamine-phosphate_oxidase_activity","termid":"PBO:0027955"}


id: PATO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a minute projection (villus).","definition_xrefs":["PATOC:PEM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villiform","termid":"PATO:0002022"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: PATO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000796 regeneration value (obsolete PATO:0000796)","termid":"PATO:0000796"}


id: FYPO:0000774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of pre-replicative complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pre-replicative complex assembly","termid":"FYPO:0000773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased pre-replicative complex assembly","synonyms":[{"name":"decreased pre-RC assembly","type":"exact"},{"name":"decreased pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"decreased pre-replicative complex formation","type":"exact"},{"name":"reduced pre-replicative complex assembly","type":"exact"}],"termid":"FYPO:0000774"}


id: FYPO:0002991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature G1/S phase transition during cellular response to hydrogen peroxide during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to H2O2","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002991"}


id: PBO:0082832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved zinc-finger domain protein involved in pre-mRNA splicing; critical for splicing of nearly all intron-containing genes; required for assembly of U4 snRNA into the U4/U6 particle","termid":"PBO:0082832"}


id: GO:2000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte migration","synonyms":[{"name":"regulation of immature T cell migration","type":"related"},{"name":"regulation of immature T lymphocyte migration","type":"related"},{"name":"regulation of immature T-cell migration","type":"related"},{"name":"regulation of immature T-lymphocyte migration","type":"related"},{"name":"regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000410"}


id: GO:0102100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + mycothiol = mycothiol-arsenate conjugate + H2O.","definition_xrefs":["GOC:pz","EC:2.8.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"mycothiol-arsenate ligase activity","secondary_identifiers":["MetaCyc:RXN-11187","RHEA:27349"],"termid":"GO:0102100"}


id: SO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription units or transcribed coding sequences.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unit_of_gene_expression","synonyms":[{"name":"unit of gene expression","type":"exact"}],"termid":"SO:0002300"}


id: GO:0050156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + 2 benzoyl-CoA = N(2),N(5)-dibenzoyl-L-ornithine + 2 CoA + 2 H+.","definition_xrefs":["EC:2.3.1.127","RHEA:16929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ornithine N-benzoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00664","MetaCyc:ORNITHINE-N-BENZOYLTRANSFERASE-RXN"],"synonyms":[{"name":"benzoyl-CoA:L-ornithine N-benzoyltransferase activity","type":"related"},{"name":"ornithine N-acyltransferase activity","type":"related"}],"termid":"GO:0050156"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83303,89414],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:clt","GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: GO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host excretion (obsolete GO:0044061)","synonyms":[{"name":"regulation by symbiont of host excretion","type":"exact"}],"termid":"GO:0044061"}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: PBO:0061827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 17","termid":"PBO:0061827"}


id: PBO:0084829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; involved in import of the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and Fzo1p; component of a large protein complex in the outer membrane that includes Mim1p and functions as cation-selective channel for translocation of positively charged precursor segments; not essential in W303 strain background","termid":"PBO:0084829"}


id: GO:0004768
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110378],"is_not":false,"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:19721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stearoyl-CoA 9-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016214","EC:1.14.19.1","Reactome:R-HSA-8847579","MetaCyc:1.14.19.1-RXN","GO:0043735","Reactome:R-HSA-5690565"],"synonyms":[{"name":"acyl-CoA desaturase","type":"broad"},{"name":"delta(9)-desaturase activity","type":"broad"},{"name":"delta9-desaturase","type":"broad"},{"name":"fatty acid desaturase","type":"broad"},{"name":"stearoyl-CoA desaturase activity","type":"broad"}],"termid":"GO:0004768","terms_by_termid":{"GO:0004768":null}}


id: PBO:0030202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multiseptate_vegetative_cell","termid":"PBO:0030202"}


id: PBO:0034517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_unattached_kinetochores","termid":"PBO:0034517"}


id: PR:O42859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S ribosomal protein S14, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.07c","secondary_identifiers":["UniProtKB:O42859"],"synonyms":[{"name":"Spom972h-MRPS14","type":"exact"}],"termid":"PR:O42859"}


id: PBO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 7, pseudogene","termid":"PBO:0047716"}


id: GO:1901043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in cellular response to misfolded protein.","definition_xrefs":["PMID:21324894","GOC:TermGenie","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in cellular response to misfolded protein (obsolete GO:1901043)","synonyms":[{"name":"polyubiquitin of cellular response to misfolded protein","type":"related"},{"name":"protein polyubiquitination involved in cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitination of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitinylation of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitylation of cellular response to misfolded protein","type":"exact"}],"termid":"GO:1901043"}


id: PBO:0063349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 3","termid":"PBO:0063349"}


id: GO:2000427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"positively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic cell clearance","synonyms":[{"name":"positive regulation of apoptotic cell removal","type":"exact"},{"name":"positive regulation of efferocytosis","type":"exact"},{"name":"positive regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000427"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: GO:0052022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of jasmonic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of jasmonic acid levels in host (obsolete GO:0052022)","synonyms":[{"name":"modulation by organism of jasmonic acid levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052022"}


id: GO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-alkyl-2-acetyl-sn-glycerol + acyl-CoA = 1-O-alkyl-2-acetyl-3-acyl-sn-glycerol + CoA.","definition_xrefs":["MetaCyc:2.3.1.125-RXN","EC:2.3.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"1-alkyl-2-acetylglycerol O-acyltransferase activity","secondary_identifiers":["RHEA:21996"],"synonyms":[{"name":"1-hexadecyl-2-acetylglycerol acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-O-alkyl-2-acetyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0047167"}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10742:SF16","PRO:DNx","OMA:SCHPO00102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: GO:0006543
data:
  {"annotated_genes":["SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96908],"is_not":false,"summary":null,"term":"GO:0006543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"glutamine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine breakdown","type":"exact"},{"name":"glutamine catabolism","type":"exact"},{"name":"glutamine degradation","type":"exact"}],"termid":"GO:0006543","terms_by_termid":{"GO:0006543":null}}


id: GO:0035457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-alpha stimulus. Interferon-alpha is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-alpha","termid":"GO:0035455"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-alpha","synonyms":[{"name":"cellular response to interferon alfa-n1","type":"related"},{"name":"cellular response to interferon alfa-n3","type":"related"},{"name":"cellular response to leukocyte interferon","type":"exact"},{"name":"cellular response to lymphoblast interferon","type":"exact"},{"name":"cellular response to lymphoblastoid interferon","type":"exact"}],"termid":"GO:0035457"}


id: SO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded RNA duplex, at least 20bp long, used experimentally to inhibit gene function by RNA interference.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi_reagent","synonyms":[{"name":"RNAi reagent","type":"exact"}],"termid":"SO:0000337"}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: PR:P09627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pma1 gene.","definition_xrefs":["UniProtKB:P09627","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.10c","synonyms":[{"name":"Spom972h-pma1","type":"exact"},{"name":"proton pump 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P09627"}


id: PR:Q09832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA wybutosine-synthesizing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23245:SF25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.06c","secondary_identifiers":["UniProtKB:Q09832"],"synonyms":[{"name":"SPAC4G8.06c","type":"related"},{"name":"Spom972h-TRMT12","type":"exact"},{"name":"tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-yW-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyw2","type":"related"}],"termid":"PR:Q09832"}


id: GO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in endocardial cushion morphogenesis","synonyms":[{"name":"apoptosis involved in endocardial cushion morphogenesis","type":"narrow"}],"termid":"GO:0003277"}


id: GO:0070655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed mechanosensory epithelia.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory epithelium regeneration","termid":"GO:0070654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}


id: GO:0021612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"facial nerve morphogenesis","termid":"GO:0021610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"facial nerve structural organisation","type":"exact"}],"termid":"GO:0021612"}


id: PBO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29","termid":"PBO:0071342"}


id: PBO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_division","termid":"PBO:0031245"}


id: GO:0016880
data:
  {"annotated_genes":["SJAG_04544","SJAG_01845","SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017178"},{"annotations":[61101,89861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to ammonia (NH3) or an amide via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null,"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acid-ammonia (or amide) ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.1.-"],"synonyms":[{"name":"amide synthase activity","type":"exact"}],"termid":"GO:0016880","terms_by_termid":{"GO:0004356":null,"GO:0017178":null}}


id: PR:Q9UST5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn7 gene.","definition_xrefs":["UniProtKB:Q9UST5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.09c","synonyms":[{"name":"Spom972h-rrn7","type":"exact"}],"termid":"PR:Q9UST5"}


id: PR:O13689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.10","synonyms":[{"name":"Spom972h-SPAC11E3.10","type":"exact"}],"termid":"PR:O13689"}


id: PBO:0041011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bisphosphoglycerate mutase","termid":"PBO:0041011"}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: GO:1905036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["PMID:22470487","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of antifungal innate immune response","termid":"GO:1905034"},{"relation_name":"positively_regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antifungal innate immune response","synonyms":[{"name":"activation of antifungal innate immune response","type":"narrow"},{"name":"up regulation of antifungal innate immune response","type":"exact"},{"name":"up-regulation of antifungal innate immune response","type":"exact"},{"name":"upregulation of antifungal innate immune response","type":"exact"}],"termid":"GO:1905036"}


id: FYPO:0008031
data:
  {"alleles_by_uniquename":{"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115142,115143],"is_not":false,"summary":null,"term":"FYPO:0008031"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cellular response to blue light stimulus is abnormal.","definition_xrefs":["PMID:23873862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":2,"genotypes_by_uniquename":{"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal blue light response","references_by_uniquename":{"PMID:23873862":null},"single_locus_annotated_genes":["SJAG_02860","SJAG_05242"],"single_locus_genotype_uniquenames":["wcs1delta","wcs2delta"],"synonyms":[{"name":"abnormal reponse to blue light","type":"exact"},{"name":"defective blue light response","type":"exact"}],"termid":"FYPO:0008031","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0008031":null,"FYPO_EXT:0000001":null}}


id: PBO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae THI80","termid":"PBO:0011086"}


id: FYECO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin","termid":"FYECO:0000398"}


id: PBO:0003546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1 (predicted)","termid":"PBO:0003546"}


id: PBO:0042154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL15-CCL14 readthrough (NMD candidate)","termid":"PBO:0042154"}


id: PBO:0062913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2RX5-TAX1BP3 readthrough (NMD candidate)","termid":"PBO:0062913"}


id: GO:0021953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron differentiation","termid":"GO:0021953"}


id: PBO:0017684
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FUS3","termid":"PBO:0017684"}


id: GO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta-carotenol + O2 = (E,E)-7-hydroxy-6-methylhepta-3,5-dienal + 14'-apo-beta-carotenal.","definition_xrefs":["RHEA:26023","EC:1.13.11.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"apo-beta-carotenoid-14',13'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R08889","MetaCyc:1.13.12.12-RXN"],"synonyms":[{"name":"8'-apo-beta-carotenol:O2 oxidoreductase activity","type":"related"},{"name":"apo-b-carotenoid-14',13'-dioxygenase activity","type":"exact"}],"termid":"GO:0050588"}


id: GO:0015514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite transmembrane transporter activity","termid":"GO:0015113"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrite efflux transmembrane transporter activity","synonyms":[{"name":"nitrite extrusion permease activity","type":"exact"}],"termid":"GO:0015514"}


id: FYPO:0003871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is in G0 phase. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PMID:20133687","GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin organization during G0","synonyms":[{"name":"abnormal chromatin organisation during G0","type":"exact"},{"name":"abnormal chromatin organization during cell quiescence","type":"exact"},{"name":"abnormal chromatin organization during quiescence","type":"exact"}],"termid":"FYPO:0003871"}


id: PBO:0073064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 2","termid":"PBO:0073064"}


id: PBO:0053371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 294","termid":"PBO:0053371"}


id: GO:1903661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["GOC:TermGenie","PMID:24280217","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"},{"relation_name":"positively_regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement-dependent cytotoxicity","synonyms":[{"name":"activation of complement-dependent cytotoxicity","type":"narrow"},{"name":"up regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"up-regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"upregulation of complement-dependent cytotoxicity","type":"exact"}],"termid":"GO:1903661"}


id: PBO:0069795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1081, pseudogene","termid":"PBO:0069795"}


id: FYPO:0006911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hexestrol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hexestrol","synonyms":[{"name":"normal cell population growth in presence of hexestrol","type":"exact"},{"name":"normal cell population growth on hexestrol","type":"exact"},{"name":"normal cellular response to hexestrol","type":"related"},{"name":"normal vegetative cell population growth on hexestrol","type":"exact"}],"termid":"FYPO:0006911"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: PBO:0088669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp10","termid":"PBO:0088669"}


id: PBO:0031634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gene_silencing","termid":"PBO:0031634"}


id: PBO:0089053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb3","termid":"PBO:0089053"}


id: PBO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 6","termid":"PBO:0043646"}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: PBO:0031172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell","termid":"PBO:0031172"}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: GO:1903330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iron-sulfur cluster assembly.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"negatively_regulates","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"negative regulation of iron-sulfur cluster assembly","synonyms":[{"name":"down regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"down regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"down regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"down-regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"down-regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"down-regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"downregulation of iron-sulfur cluster assembly","type":"exact"},{"name":"downregulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"downregulation of iron-sulphur cluster assembly","type":"exact"},{"name":"inhibition of iron-sulfur cluster assembly","type":"narrow"},{"name":"inhibition of iron-sulfur cluster biosynthesis","type":"related"},{"name":"inhibition of iron-sulphur cluster assembly","type":"narrow"},{"name":"negative regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"negative regulation of iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:1903330"}


id: PBO:0069076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 323, pseudogene","termid":"PBO:0069076"}


id: FYPO:0004376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"increased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"increased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004376"}


id: MOD:01097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-benzyl-L-cysteine.","definition_xrefs":["DeltaMass:242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-benzyl-L-cysteine","termid":"MOD:01097"}


id: GO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which a halogen in the donor substance acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on halogen in donors, with NAD or NADP as acceptor (obsolete GO:0052584)","secondary_identifiers":["EC:1.22.1.-"],"termid":"GO:0052584"}


id: GO:1990077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a family of protein complexes that form at the origin of replication or stalled replication forks and function in replication primer synthesis in all organisms. Early complexes initiate double-stranded DNA unwinding. The core unit consists of a replicative helicase and a primase. The helicase further unwinds the DNA and recruits the polymerase machinery. The primase synthesizes RNA primers that act as templates for complementary stand replication by the polymerase machinery. The primosome contains a number of associated proteins and protein complexes and contributes to the processes of replication initiation, lagging strand elongation, and replication restart.","definition_xrefs":["PMID:21856207","GOC:bhm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"replisome","termid":"GO:0030894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"primosome complex","synonyms":[{"name":"primosome","type":"exact"}],"termid":"GO:1990077"}


id: PBO:0057478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 597","termid":"PBO:0057478"}


id: PBO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec5","termid":"PBO:0090427"}


id: FYPO:0007782
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115108,115112,115537,115538,115539,115540,115541,115542,115544,115545],"is_not":false,"summary":null,"term":"FYPO:0007782"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth does not occur under conditions that normally induce it.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02771":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"abolished hyphal transition","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_00364","SJAG_02576","SJAG_01205","SJAG_01680","SJAG_02771","SJAG_00429","SJAG_02266","SJAG_01605"],"single_locus_genotype_uniquenames":["rad24delta","rad25delta","rad3delta","crb2delta","rad9delta","chk1delta","rad26delta","rad1delta"],"synonyms":[{"name":"abolished transition to hyphal growth","type":"exact"},{"name":"hyphal transition abolished","type":"exact"}],"termid":"FYPO:0007782","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0080761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XIAP antisense RNA 1","termid":"PBO:0080761"}


id: PATO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth five or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiparous","termid":"PATO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grand multi[arous","termid":"PATO:0002372"}


id: GO:0055006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell development","synonyms":[{"name":"cardiocyte development","type":"exact"},{"name":"heart cell development","type":"related"}],"termid":"GO:0055006"}


id: GO:0006265
data:
  {"annotated_genes":["SJAG_05193","SJAG_02394","SJAG_03567","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100193,100401,101996,109119],"is_not":false,"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.","definition_xrefs":["ISBN:0935702490","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA topological change","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA underwinding","type":"narrow"}],"termid":"GO:0006265","terms_by_termid":{"GO:0006265":null}}


id: SO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is part of a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_CDS","synonyms":[{"name":"transposable element CDS","type":"exact"}],"termid":"SO:0001896"}


id: PBO:0078181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-5","termid":"PBO:0078181"}


id: PBO:0041571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 202","termid":"PBO:0041571"}


id: FYPO:0000945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"swollen spheroid vegetative cell","synonyms":[{"name":"enlarged spheroid vegetative cell","type":"related"},{"name":"enlarged volume spheroid vegetative cell","type":"exact"},{"name":"large spheroid vegetative cell","type":"related"},{"name":"spheroid vegetative cell with increased cell size","type":"related"},{"name":"spheroid vegetative cell with increased cell volume","type":"exact"},{"name":"swollen rounded vegetative cell","type":"exact"},{"name":"swollen spheroid cell during vegetative growth","type":"exact"},{"name":"swollen spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000945"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: PBO:0051028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFBP7 antisense RNA 1","termid":"PBO:0051028"}


id: GO:0014028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord formation","termid":"GO:0014028"}


id: GO:0060985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of an epicardial cell to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell fate commitment","termid":"GO:0060949"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell fate commitment","termid":"GO:0060985"}


id: GO:1901464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"down regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down regulation of tetrapyrrole formation","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down-regulation of tetrapyrrole formation","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"downregulation of tetrapyrrole formation","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"inhibition of tetrapyrrole formation","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole formation","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901464"}


id: PBO:0078074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 1","termid":"PBO:0078074"}


id: PBO:0057424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548X host gene","termid":"PBO:0057424"}


id: PBO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein, implicated in meiotic chromosome segregation","termid":"PBO:0001027"}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytokinin dehydrogenase activity","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83709,98336],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: PBO:0030063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphoglycerate_mutase_activity","termid":"PBO:0030063"}


id: PBO:0036316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga2","termid":"PBO:0036316"}


id: PR:O74463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.01","synonyms":[{"name":"Spom972h-SPCC1739.01","type":"exact"}],"termid":"PR:O74463"}


id: PBO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf7","termid":"PBO:0003692"}


id: GO:0044384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites, occurring in a host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host outer membrane","synonyms":[{"name":"host cell outer membrane","type":"related"}],"termid":"GO:0044384"}


id: GO:0160073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Casparian strip, a region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material.","definition_xrefs":["PMID:28104889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Casparian strip assembly","synonyms":[{"name":"Casparian strip formation","type":"exact"}],"termid":"GO:0160073"}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + S-adenosyl-L-methionine = H+ + homoeriodictyol + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["RHEA:60948","MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: PBO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 2","termid":"PBO:0047639"}


id: PBO:0056789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 5","termid":"PBO:0056789"}


id: PBO:0012228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Seg1-Like Eisosome protein","termid":"PBO:0012228"}


id: PBO:0076549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 1","termid":"PBO:0076549"}


id: PBO:0046593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 3","termid":"PBO:0046593"}


id: GO:1900477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of G1/S transition of mitotic cell cycle by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:19841732"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900477)","termid":"GO:1900477"}


id: PBO:0028520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation","termid":"PBO:0028520"}


id: PBO:0046424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A8","termid":"PBO:0046424"}


id: PBO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XII","termid":"PBO:0046812"}


id: PBO:0028588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_monopolar_cell_growth","termid":"PBO:0028588"}


id: PBO:0085835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0085835"}


id: GO:1901491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"negatively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphangiogenesis","synonyms":[{"name":"down regulation of lymph vessel formation","type":"exact"},{"name":"down regulation of lymphangiogenesis","type":"exact"},{"name":"down-regulation of lymph vessel formation","type":"exact"},{"name":"down-regulation of lymphangiogenesis","type":"exact"},{"name":"downregulation of lymph vessel formation","type":"exact"},{"name":"downregulation of lymphangiogenesis","type":"exact"},{"name":"inhibition of lymph vessel formation","type":"narrow"},{"name":"inhibition of lymphangiogenesis","type":"narrow"},{"name":"negative regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901491"}


id: PBO:0030128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_manganese_level","termid":"PBO:0030128"}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: PBO:0073094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 3","termid":"PBO:0073094"}


id: PBO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 13","termid":"PBO:0042613"}


id: GO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"response to prostaglandin D","termid":"GO:0071798"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin D stimulus","termid":"GO:0071799"}


id: GO:0048139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the female gonad.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst encapsulation","termid":"GO:0048138"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst encapsulation","termid":"GO:0048139"}


id: PBO:0088122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; interacts with the V-ATPase assembly factor Vma21p in the ER; involved in V0 biogenesis","termid":"PBO:0088122"}


id: GO:2001092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an arabinotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"arabinotriose transport","termid":"GO:2001092"}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: GO:0060060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage.","definition_xrefs":["GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic retina morphogenesis in camera-type eye","termid":"GO:0060060"}


id: PBO:0076019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 16","termid":"PBO:0076019"}


id: GO:1902581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular localization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular localization (obsolete GO:1902581)","synonyms":[{"name":"multi organism cellular localization","type":"exact"}],"termid":"GO:1902581"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: GO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:15928678","GOC:add","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipid antigen transport","termid":"GO:0002494"}


id: PBO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member A","termid":"PBO:0047157"}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","PMID:25793578","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: PBO:0086917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc-cluster transcription factor; involved in utilization of iron-transporting siderophore pulcherrimin","termid":"PBO:0086917"}


id: GO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex remodeling","termid":"GO:0001119"}


id: GO:1904421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactosamine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:12057922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to D-galactosamine","termid":"GO:1904421"}


id: PBO:0054087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1440","termid":"PBO:0054087"}


id: PBO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus4 (predicted)","termid":"PBO:0005571"}


id: SO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of three nucleotide bases in tRNA which recognizes a codon in mRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"},{"relation_name":"part_of","term_name":"anticodon_loop","termid":"SO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","secondary_identifiers":["http://en.wikipedia.org/wiki/Anticodon"],"synonyms":[{"name":"anti-codon","type":"exact"}],"termid":"SO:0001174"}


id: PR:O74939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.01c","synonyms":[{"name":"Spom972h-dbl2","type":"exact"}],"termid":"PR:O74939"}


id: PBO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA_replication_fork_barrier","termid":"PBO:0034607"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: PBO:0080311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 75 pseudogene","termid":"PBO:0080311"}


id: GO:0010815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the peptide bradykinin.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"bradykinin catabolic process","termid":"GO:0010815"}


id: SO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a valine anticodon, and a 3' valine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"valine_tRNA_primary_transcript","termid":"SO:0000230"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl_tRNA","synonyms":[{"name":"valyl tRNA","type":"exact"},{"name":"valyl-transfer RNA","type":"related"},{"name":"valyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000273"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: GO:0042144
data:
  {"annotated_genes":["SJAG_01080","SJAG_03386","SJAG_00330","SJAG_02433","SJAG_01299","SJAG_00380","SJAG_05194","SJAG_04909","SJAG_03915","SJAG_03137","SJAG_04966","SJAG_02384","SJAG_03442","SJAG_00029","SJAG_01072","SJAG_01598","SJAG_01319","SJAG_03072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84564,86653,86777,95646,95945,96007,96455,96842,100409,102489,104126,105287,106135,110492,112838],"is_not":false,"summary":null,"term":"GO:0042144"},{"annotations":[97169],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[93279,106133],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[93042],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"}]},"cv_name":"biological_process","definition":"The fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01080":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null,"SJAG_03442":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042145"],"synonyms":[{"name":"homotypic vacuole fusion","type":"exact"},{"name":"homotypic vacuole fusion (non-autophagic)","type":"exact"},{"name":"homotypic vacuole fusion, non-autophagic","type":"exact"},{"name":"vacuole fusion (non-autophagic)","type":"exact"}],"termid":"GO:0042144","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null}}


id: GO:0071162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the GINS complex, Cdc45p, and the heterohexameric MCM complex, and that is involved in unwinding DNA during replication.","definition_xrefs":["PMID:19228417","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex","termid":"GO:0031261"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"CMG complex","synonyms":[{"name":"unwindosome","type":"exact"}],"termid":"GO:0071162"}


id: GO:2001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrahydromethanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydromethanopterin metabolic process","synonyms":[{"name":"tetrahydromethanopterin metabolism","type":"exact"}],"termid":"GO:2001117"}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:1720142","PMID:20629984","PMID:9214543","GO:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: GO:0008743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + NAD+ = L-2-amino-3-oxobutanoate + CO2 + NADH.","definition_xrefs":["EC:1.1.1.103","RHEA:13161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-threonine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:THREODEHYD-RXN","Reactome:R-HSA-6798667","KEGG_REACTION:R01465"],"synonyms":[{"name":"L-threonine dehydrogenase activity","type":"related"},{"name":"L-threonine:NAD+ oxidoreductase activity","type":"related"},{"name":"threonine 3-dehydrogenase activity","type":"broad"},{"name":"threonine dehydrogenase activity","type":"related"}],"termid":"GO:0008743"}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: PBO:0053590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 616","termid":"PBO:0053590"}


id: GO:1903662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-altrarate.","definition_xrefs":["PMID:17649980","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-altrarate metabolic process","synonyms":[{"name":"L-altrarate(1-) metabolism","type":"exact"}],"termid":"GO:1903662"}


id: FYPO:0009090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of sodium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of sodium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to sodium chloride and SDS","type":"exact"},{"name":"hypersensitive to sodium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to sodium chloride and SDS","type":"exact"},{"name":"sensitive to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and SDS in combination","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009090"}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: PBO:0039938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1B","termid":"PBO:0039938"}


id: PBO:0062850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoancorin","termid":"PBO:0062850"}


id: PBO:0109632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C (pseudogene)","termid":"PBO:0109632"}


id: PBO:0030444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1/S_phase_transition","termid":"PBO:0030444"}


id: PBO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25","termid":"PBO:0072303"}


id: GO:2000634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of primary miRNA processing","synonyms":[{"name":"regulation of pri-miRNA processing","type":"exact"},{"name":"regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000634"}


id: PBO:0058897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12115","termid":"PBO:0058897"}


id: PBO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 14","termid":"PBO:0060113"}


id: PATO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial symmetry","termid":"PATO:0001325"}


id: FYPO:0004000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased glutamate-cysteine ligase activity","termid":"FYPO:0004000"}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: PBO:0050720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 6","termid":"PBO:0050720"}


id: PR:O14026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-36 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.02c","synonyms":[{"name":"SET domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set2","type":"exact"},{"name":"lysine N-methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14026"}


id: PBO:0066723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 20","termid":"PBO:0066723"}


id: PBO:0026637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromeric_chromatin_during_vegetative_growth","termid":"PBO:0026637"}


id: PBO:0028202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028202"}


id: FYPO:0001037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth during cellular response to salt stress","synonyms":[{"name":"normal cell population growth during cellular response to ionic osmotic stress","type":"exact"},{"name":"normal cell population growth during cellular response to salt stress","type":"exact"},{"name":"normal cellular response to salt stress","type":"related"},{"name":"normal cellular salinity response","type":"related"},{"name":"normal vegetative cell population growth during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001037"}


id: PBO:0088494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha amylase","termid":"PBO:0088494"}


id: PBO:0026976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_mitochondrion","termid":"PBO:0026976"}


id: PBO:0076283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor","termid":"PBO:0076283"}


id: GO:0006182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cGMP metabolic process","termid":"GO:0046068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cGMP biosynthetic process","synonyms":[{"name":"cGMP anabolism","type":"exact"},{"name":"cGMP biosynthesis","type":"exact"},{"name":"cGMP formation","type":"exact"},{"name":"cGMP synthesis","type":"exact"}],"termid":"GO:0006182"}


id: GO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hepatocyte growth factor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hepatocyte growth factor binding","synonyms":[{"name":"HGF binding","type":"exact"}],"termid":"GO:0036458"}


id: PBO:0069268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 524, pseudogene","termid":"PBO:0069268"}


id: PBO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 17","termid":"PBO:0071176"}


id: GO:0150065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:aruk","PMID:19457097","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of deacetylase activity","termid":"GO:0150065"}


id: GO:0046112
data:
  {"annotated_genes":["SJAG_01081","SJAG_01859","SJAG_02290","SJAG_00779","SJAG_03164","SJAG_05024","SJAG_01126","SJAG_04156","SJAG_01661","SJAG_00197","SJAG_03140","SJAG_02364","SJAG_00412","SJAG_01814","SJAG_00444","SJAG_00694","SJAG_00106","SJAG_00964","SJAG_00392","SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111553,107814,84916,83221,94176,88987,112730,102323,106952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[113351,96368,106116,106229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[110481,104194,106117,93467,100563,108327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[87465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00197":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01081":null,"SJAG_01126":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02290":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_04156":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase anabolism","type":"exact"},{"name":"nucleobase biosynthesis","type":"exact"},{"name":"nucleobase formation","type":"exact"},{"name":"nucleobase synthesis","type":"exact"}],"termid":"GO:0046112","terms_by_termid":{"GO:0006168":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0046084":null}}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PR:O60072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activating signal cointegrator 1 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03837","PANTHER:PTHR11752:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.10c","secondary_identifiers":["UniProtKB:O60072"],"synonyms":[{"name":"Spom972h-ASCC3","type":"exact"},{"name":"meiotically up-regulated gene 81 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60072"}


id: GO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a leg derived from an imaginal disc are generated and organized. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"leg disc morphogenesis","termid":"GO:0007478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}


id: PBO:0054220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1601","termid":"PBO:0054220"}


id: FYPO:0006624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"increased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"increased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"increased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006624"}


id: SO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repressor molecule is required for transcription to stop.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_repressed","synonyms":[{"name":"transcriptionally repressed","type":"exact"}],"termid":"SO:0000126"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: PBO:0087984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; two forms of protein are made by alternative translation starts; localizes to both nucleus and mitochondrion to produce modified base N2,N2-dimethylguanosine in tRNAs in both compartments; nuclear Trm1p is evenly distributed around inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body (SPB) mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon SPB","termid":"PBO:0087984"}


id: GO:1905363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bc","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"positively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"positive regulation of endosomal vesicle fusion","synonyms":[{"name":"activation of endosomal vesicle fusion","type":"narrow"},{"name":"activation of endosome vesicle fusion","type":"narrow"},{"name":"positive regulation of endosome vesicle fusion","type":"exact"},{"name":"up regulation of endosomal vesicle fusion","type":"exact"},{"name":"up regulation of endosome vesicle fusion","type":"exact"},{"name":"up-regulation of endosomal vesicle fusion","type":"exact"},{"name":"up-regulation of endosome vesicle fusion","type":"exact"},{"name":"upregulation of endosomal vesicle fusion","type":"exact"},{"name":"upregulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905363"}


id: PBO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 16","termid":"PBO:0052184"}


id: GO:0160147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA.","definition_xrefs":["EC:5.4.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"tRNA pseudouridine(38-40) synthase activity","secondary_identifiers":["RHEA:22376","MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"],"synonyms":[{"name":"PSUI activity","type":"exact"},{"name":"tRNA pseudouridylate synthase","type":"exact"}],"termid":"GO:0160147"}


id: PR:O43077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase 15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02846","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein kinase mde3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.19","secondary_identifiers":["UniProtKB:O43077"],"synonyms":[{"name":"Spom972h-MAPK15","type":"exact"},{"name":"mei4-dependent protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43077"}


id: GO:0140027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the contractile vacuole to a specific location.","definition_xrefs":["PMID:19687255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole localization","synonyms":[{"name":"establishment of contractile vacuole localization","type":"narrow"}],"termid":"GO:0140027"}


id: GO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"}


id: PBO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda receptor 1","termid":"PBO:0050964"}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


id: PBO:0082352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subunits; similar to Pos5p; overexpression complements certain pos5 phenotypes; YEF1 has a paralog, UTR1, that arose from the whole genome duplication","termid":"PBO:0082352"}


id: SO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACAAT, found in promoters of mating type M-specific genes in fission yeast and bound by the transcription factor Mat1-Mc.","definition_xrefs":["PMID:9233811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_M_box","synonyms":[{"name":"mating type M-box","type":"exact"}],"termid":"SO:0001852"}


id: GO:0034450
data:
  {"annotated_genes":["SJAG_02685"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88217],"is_not":false,"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:mcc","PMID:17190603","PMID:10089879","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin protein ligase activity","termid":"GO:0061630"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"}],"interesting_parent_ids":["GO:0019787","GO:0003824","GO:0140096","GO:0004842","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ubiquitin-ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-937050","Reactome:R-HSA-975122"],"synonyms":[{"name":"E4","type":"exact"}],"termid":"GO:0034450","terms_by_termid":{"GO:0034450":null}}


id: PBO:0039390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaelysin family metallopeptidase 1","termid":"PBO:0039390"}


id: GO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,-6-trans-farnesol + CTP = 2-trans,-6-trans-farnesyl monophosphate + CDP + H+.","definition_xrefs":["PMID:21395888","RHEA:51680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"CTP:farnesol kinase activity","secondary_identifiers":["GO:0052669","EC:2.7.1.216","MetaCyc:RXN-11625"],"synonyms":[{"name":"CTP:2-trans,-6-trans-farnesol kinase activity","type":"exact"},{"name":"CTP:2-trans,-6-trans-farnesol phosphotransferase activity","type":"exact"},{"name":"farnesol kinase activity","type":"related"},{"name":"farnesol phosphotransferase activity","type":"exact"},{"name":"trans,trans-farnesol kinase activity","type":"narrow"}],"termid":"GO:0052668"}


id: PBO:0003079
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of SAPK pathway","termid":"PBO:0003079"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Pi_helix","BS:00153"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_01348","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91115,92725],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0004857","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: PR:Q8TFG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB15E9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.02c","synonyms":[{"name":"Spom972h-SPAPB15E9.02c","type":"exact"}],"termid":"PR:Q8TFG8"}


id: GO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric, bifunctional enzyme complex which catalyzes the synthesis and degradation of fructose 2,6-bisphosphate, and is required for both glycolysis and gluconeogenesis.","definition_xrefs":["GOC:so","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex","synonyms":[{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 complex","type":"narrow"}],"termid":"GO:0043540"}


id: PBO:0055647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3086","termid":"PBO:0055647"}


id: FYPO:0003962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal phospholipid:diacylglycerol acyltransferase activity","termid":"FYPO:0003961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"decreased PDAT activity","type":"exact"},{"name":"reduced phospholipid:diacylglycerol acyltransferase activity","type":"exact"}],"termid":"FYPO:0003962"}


id: SO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal_peptide is a short region of the peptide located at the N-terminus that directs the protein to be secreted or part of membrane components.","direct_ancestors":[{"relation_name":"derives_from","term_name":"signal_peptide_region_of_CDS","termid":"SO:0002251"},{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"},{"relation_name":"part_of","term_name":"propeptide","termid":"SO:0001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"signal_peptide","secondary_identifiers":["BS:00159","http://en.wikipedia.org/wiki/Signal_peptide"],"synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"signal","type":"related"},{"name":"signal peptide","type":"exact"},{"name":"signal peptide coding sequence","type":"exact"}],"termid":"SO:0000418"}


id: PBO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spondyloepiphyseal dysplasia tarda","termid":"PBO:0002189"}


id: PBO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 3","termid":"PBO:0039522"}


id: PBO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu3 and snu32 RNAs present at similar levels","termid":"PBO:0016046"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: GO:0021738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fastigial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fastigial nucleus development","termid":"GO:0021738"}


id: GO:0045989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"positive regulation of muscle contraction","termid":"GO:0045933"},{"relation_name":"positively_regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle contraction","synonyms":[{"name":"activation of striated muscle contraction","type":"narrow"},{"name":"stimulation of striated muscle contraction","type":"narrow"},{"name":"up regulation of striated muscle contraction","type":"exact"},{"name":"up-regulation of striated muscle contraction","type":"exact"},{"name":"upregulation of striated muscle contraction","type":"exact"}],"termid":"GO:0045989"}


id: PBO:0052077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 2","termid":"PBO:0052077"}


id: PBO:0073591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 2","termid":"PBO:0073591"}


id: PBO:0071724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 22","termid":"PBO:0071724"}


id: GO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving camalexin, an indole phytoalexin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"camalexin metabolic process","synonyms":[{"name":"camalexin metabolism","type":"exact"}],"termid":"GO:0052317"}


id: PBO:0070096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 10 pseudogene","termid":"PBO:0070096"}


id: FYPO:0002188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a normal volume and spheroid shape. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, normal volume spheroid cells (obsolete FYPO:0002188)","synonyms":[{"name":"inviable microcolony, normal volume rounded cells","type":"exact"},{"name":"inviable microcolony, normal volume spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002188"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: GO:2000813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament depolymerization","termid":"GO:0030836"},{"relation_name":"is_a","term_name":"positive regulation of actin filament polymerization","termid":"GO:0030838"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"negatively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of barbed-end actin filament capping","synonyms":[{"name":"negative regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"negative regulation of barbed-end actin capping activity","type":"exact"},{"name":"negative regulation of plus-end F-actin capping activity","type":"exact"},{"name":"negative regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000813"}


id: GO:0071368
data:
  {"annotated_genes":["SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009736"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokinin","termid":"GO:0009735"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cytokinin stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071368","terms_by_termid":{"GO:0009736":null}}


id: PBO:0064809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2 family member B","termid":"PBO:0064809"}


id: GO:0047444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate + N-acyl-D-mannosamine 6-phosphate = phosphate + N-acylneuraminate 9-phosphate.","definition_xrefs":["EC:2.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylneuraminate-9-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-9988","GO:0019007","Reactome:R-HSA-4084976","RHEA:13421"],"synonyms":[{"name":"N-acetylneuraminate 9-phosphate lyase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate sialic acid 9-phosphate synthase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate synthetase activity","type":"related"},{"name":"N-acetylneuraminic acid phosphate synthase activity","type":"exact"},{"name":"N-acylneuraminate-9-phosphate pyruvate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"phosphoenolpyruvate:N-acyl-D-mannosamine-6-phosphate 1-(2-carboxy-2-oxoethyl)transferase activity","type":"related"},{"name":"sialic acid 9-phosphate synthetase activity","type":"related"}],"termid":"GO:0047444"}


id: PBO:0046508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 3","termid":"PBO:0046508"}


id: PBO:0080224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vir like m6A methyltransferase associated","termid":"PBO:0080224"}


id: PBO:0029999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_decreased_numbers_during_glucose_starvation","termid":"PBO:0029999"}


id: PBO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 4","termid":"PBO:0045191"}


id: PBO:0056139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 1","termid":"PBO:0056139"}


id: PBO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular leucine rich repeat and fibronectin type III domain containing 2","termid":"PBO:0046171"}


id: PBO:0054114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1479","termid":"PBO:0054114"}


id: PBO:0077934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 7","termid":"PBO:0077934"}


id: PBO:0058413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4782","termid":"PBO:0058413"}


id: GO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair protein (obsolete GO:0003685)","synonyms":[{"name":"DNA repair protein","type":"exact"}],"termid":"GO:0003685"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104146],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: PBO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fio1","termid":"PBO:0000365"}


id: PBO:0085400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in maintaining membrane organization; involved in maintaining organization during stress conditions; induced by heat shock, oxidative stress, osmostress, stationary phase, glucose depletion, oleate and alcohol; protein abundance increased in response to DNA replication stress and dietary restriction; regulated by the HOG and Ras-Pka pathways; required for dietary restriction-induced lifespan extension","termid":"PBO:0085400"}


id: GO:0045691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of female gametophyte central cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac central cell differentiation","synonyms":[{"name":"regulation of female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0045691"}


id: PBO:0057354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-2","termid":"PBO:0057354"}


id: GO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chlamydospore over time, from its formation to the mature structure. A chlamydospores is a mitotic (asexual) one-celled spore, produced primarily for survival, not dispersal, originating endogenously and singly within part of a pre-existing cell and possessing an inner secondary and often thickened cell wall. An example of this is found in Candida albicans.","definition_xrefs":["GOC:mcc","PMID:14663094","GOC:mtg_sensu","ISBN:085199377X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlamydospore formation","secondary_identifiers":["GO:0055027"],"synonyms":[{"name":"chlamydospore development","type":"exact"}],"termid":"GO:0001410"}


id: PBO:0054157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1524","termid":"PBO:0054157"}


id: FYECO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, cysteine nitrogen source","synonyms":[{"name":"glucose minimal medium, cysteine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, cysteine nitrogen source","type":"related"}],"termid":"FYECO:0000416"}


id: PBO:0089023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPATCH11 ortholog","termid":"PBO:0089023"}


id: FYPO:0001054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when longer than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"cut, elongated cell","synonyms":[{"name":"cut following delayed onset of mitosis","type":"exact"},{"name":"cut with mitotic catastrophe, elongated cell","type":"related"},{"name":"cut, elongated cell during mitotic cell cycle","type":"related"},{"name":"cut, elongated cell during vegetative growth","type":"exact"},{"name":"cut, long cell","type":"exact"},{"name":"elongated cut cell","type":"exact"},{"name":"mitotic catastrophe with cut, elongated cell","type":"related"},{"name":"septation following abnormal nuclear division, long cell","type":"exact"}],"termid":"FYPO:0001054"}


id: FYPO:0003428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine or cysteine, and therefore requires arginine and cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for arginine","termid":"FYPO:0000035"},{"relation_name":"is_a","term_name":"growth auxotrophic for cysteine","termid":"FYPO:0000037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for arginine and cysteine","synonyms":[{"name":"arginine and cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine and cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine and cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0003428"}


id: PBO:0039915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 15","termid":"PBO:0039915"}


id: GO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = D-galactosyl-N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.86-RXN","EC:2.4.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity","secondary_identifiers":["RHEA:16045"],"synonyms":[{"name":"GalT-4","type":"related"},{"name":"UDP-galactose:N-acetyl-D-glucosaminyl-1,3-D-galactosyl-1,4-D-glucosylceramide beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-glucosaminyl-1,3-D-galactosyl-1,4-D-glucosylceramide beta-D-galactosyltransferase activity","type":"related"},{"name":"paragloboside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyl-glucosaminylgalactosylglucosylceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047275"}


id: PBO:0061733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin","termid":"PBO:0061733"}


id: PBO:0085258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral mitochondrial inner membrane protein; may facilitate use of unformylated tRNA-Met in mitochondrial translation initiation; stabilizes the bicistronic AAP1-ATP6 mRNA","termid":"PBO:0085258"}


id: GO:0140901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-asparagine(out) + Na+(out) = L-asparagine(in) + Na+(in).","definition_xrefs":["PMID:21511949","PMID:28416685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"L-asparagine transmembrane transporter activity","termid":"GO:0015182"},{"relation_name":"is_a","term_name":"alanine:sodium symporter activity","termid":"GO:0015655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-asparagine:sodium symporter activity","secondary_identifiers":["TC:2.A.18.6.13","RHEA:71383"],"synonyms":[{"name":"asparagine:sodium symporter activity","type":"exact"},{"name":"sodium:L-asparagine symporter activity","type":"exact"},{"name":"sodium:asparagine symporter activity","type":"exact"}],"termid":"GO:0140901"}


id: GO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:kmv","PMID:20523893","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of age-related behavioral decline (obsolete GO:0090647)","termid":"GO:0090647"}


id: PBO:0028765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028765"}


id: PBO:0090901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1","termid":"PBO:0090901"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: PBO:0052078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 3","termid":"PBO:0052078"}


id: PBO:0058046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4267","termid":"PBO:0058046"}


id: GO:0015941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pantothenate catabolic process","synonyms":[{"name":"pantothenate breakdown","type":"exact"},{"name":"pantothenate catabolism","type":"exact"},{"name":"pantothenate degradation","type":"exact"},{"name":"vitamin B5 catabolic process","type":"exact"},{"name":"vitamin B5 catabolism","type":"exact"}],"termid":"GO:0015941"}


id: PBO:0057909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3612","termid":"PBO:0057909"}


id: PBO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm10 (predicted)","termid":"PBO:0001300"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:lm","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: PBO:0024848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Cyclin knockout","termid":"PBO:0024848"}


id: PBO:0086671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0086671"}


id: GO:2000510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"positively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"}


id: PBO:0063066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proapoptotic nucleolar protein 1","termid":"PBO:0063066"}


id: PBO:0072643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTEL1-TNFRSF6B readthrough (NMD candidate)","termid":"PBO:0072643"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:12175151","Unimod:65#K","PubMed:11344537","PubMed:11857757","PubMed:15189151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


