# terms

id: PBO:0067422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 541, pseudogene","termid":"PBO:0067422"}


id: PATO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000978 relative permeability value (obsolete PATO:0000978)","termid":"PATO:0000978"}


id: PBO:0076422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 3","termid":"PBO:0076422"}


id: PBO:0076905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 261","termid":"PBO:0076905"}


id: GO:0072364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072364)","synonyms":[{"name":"regulation of cellular ketone metabolic process by regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072364"}


id: PBO:0044030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4","termid":"PBO:0044030"}


id: PBO:0065544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor","termid":"PBO:0065544"}


id: PBO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1AKMT4-ECE2 readthrough","termid":"PBO:0045866"}


id: GO:0052150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host apoptosis","secondary_identifiers":["VZ:1518","VZ:1581"],"synonyms":[{"name":"modulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"modulation by symbiont of host apoptosis","type":"narrow"},{"name":"modulation by symbiont of host apoptotic process","type":"exact"},{"name":"modulation by virus of host apoptosis","type":"narrow"},{"name":"regulation by virus of host apoptosis","type":"narrow"}],"termid":"GO:0052150"}


id: PBO:0082768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; contributes to SAM complex stability","termid":"PBO:0082768"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: GO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore encystment on host","termid":"GO:0075216"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"positively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore encystment on host","termid":"GO:0075220"}


id: PBO:0017558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial anion transmembrane transporter (predicted)","termid":"PBO:0017558"}


id: PBO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 2","termid":"PBO:0061999"}


id: PBO:0083188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C","termid":"PBO:0083188"}


id: GO:0090535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.","definition_xrefs":["PMID:16568949","PMID:21810179","GOC:krc","PMID:15284901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"WICH complex","termid":"GO:0090535"}


id: PBO:0074751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 110","termid":"PBO:0074751"}


id: PBO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030798"}


id: RO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is transcribed from y if and only if x is synthesized from template y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"RO:0002510"}


id: FYPO:0000700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000700"}


id: MOD:01540
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01540"}


id: FYECO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, methionine nitrogen source","synonyms":[{"name":"glucose minimal medium, methionine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, methionine nitrogen source","type":"related"}],"termid":"FYECO:0000417"}


id: FYPO:0007251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased lipid binding","synonyms":[{"name":"reduced lipid binding","type":"exact"}],"termid":"FYPO:0007251"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: SO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at one end and presumed to have a deficiency or duplication at the other end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_deficiency_plus_aneuploid","synonyms":[{"name":"inversion derived deficiency plus aneuploid","type":"exact"}],"termid":"SO:0000512"}


id: PBO:0089322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1","termid":"PBO:0089322"}


id: PBO:0066167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal biogenesis factor","termid":"PBO:0066167"}


id: PBO:0073728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 9","termid":"PBO:0073728"}


id: PBO:0035804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0035804"}


id: GO:0035957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the breakdown of starch, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of starch catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035957)","synonyms":[{"name":"positive regulation of starch breakdown by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch breakdown by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of starch catabolic process by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch catabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of starch degradation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of starch degradation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035957"}


id: PBO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase (predicted)","termid":"PBO:0000751"}


id: PBO:0051303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-43","termid":"PBO:0051303"}


id: PBO:0049313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2 (gene/pseudogene)","termid":"PBO:0049313"}


id: PBO:0012269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 4 Pre6","termid":"PBO:0012269"}


id: PBO:0056910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell immunoglobulin like receptor 1","termid":"PBO:0056910"}


id: GO:0016649
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.5.-"],"termid":"GO:0016649","terms_by_termid":{"GO:0004657":null}}


id: FYPO:0006825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body","termid":"FYPO:0000941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"abolished protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"abolished protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic M-phase","type":"related"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"protein absent from mitotic spindle pole body during mitosis","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during mitosis","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during mitosis","type":"exact"},{"name":"protein localization to spindle pole body abolished during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0006825"}


id: PBO:0091159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2","termid":"PBO:0091159"}


id: PBO:0082587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi GTPase-activating protein (GAP) for yeast Rabs; the Rab family members are Ypt1p (in vivo) and for Ypt1p, Sec4p, Ypt7p, and Ypt51p (in vitro); involved in vesicle docking and fusion; interacts with autophagosome component Atg8p","termid":"PBO:0082587"}


id: PBO:0045718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 2","termid":"PBO:0045718"}


id: GO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil chemotaxis","termid":"GO:0030593"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: FYPO:0004933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is increased.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"increased prospore membrane formation","synonyms":[{"name":"increased ascospore-type prospore membrane assembly","type":"exact"},{"name":"increased forespore membrane formation","type":"exact"}],"termid":"FYPO:0004933"}


id: PBO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 34","termid":"PBO:0052794"}


id: PBO:0089253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b","termid":"PBO:0089253"}


id: PBO:0074700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70J","termid":"PBO:0074700"}


id: PBO:0029445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity","termid":"PBO:0029445"}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: PBO:0076591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 12","termid":"PBO:0076591"}


id: GO:1990496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An actin filament organization process that contributes to regulation of actomyosin contractile ring assembly during mitotic cytokinesis.","definition_xrefs":["PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly (obsolete GO:1990496)","synonyms":[{"name":"regulation of actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1990496"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: PBO:0049340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 5","termid":"PBO:0049340"}


id: PBO:0078290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 23-1","termid":"PBO:0078290"}


id: PBO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.83","termid":"PBO:0009640"}


id: PBO:0084954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-stress response protein; expression is activated by a variety of xenobiotic agents and environmental or physiological stresses; DDR2 has a paralog, HOR7, that arose from the whole genome duplication","termid":"PBO:0084954"}


id: GO:0106339
data:
  {"annotated_genes":["SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93511],"is_not":false,"summary":null,"term":"GO:0106339"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytosine32 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylcytidine32 in tRNA.","definition_xrefs":["PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01269":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003674","GO:0016740","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA (cytidine(32)-2'-O)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.205","MetaCyc:RXN-11866","RHEA:42396"],"synonyms":[{"name":"tRNA (cytidine 32-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0106339","terms_by_termid":{"GO:0106339":null}}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["GOC:TermGenie","GOC:pr","PMID:19470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: GO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.","definition_xrefs":["GOC:jl","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to morphine","termid":"GO:0043278"}


id: GO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-acetoin = (R)-acetoin.","definition_xrefs":["RHEA:12092","EC:5.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"acetoin racemase activity","secondary_identifiers":["KEGG_REACTION:R02949","MetaCyc:ACETOIN-RACEMASE-RXN"],"synonyms":[{"name":"acetylmethylcarbinol racemase activity","type":"related"}],"termid":"GO:0047604"}


id: PR:C6Y4C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C757.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.15","synonyms":[{"name":"Spom972h-cox14","type":"exact"}],"termid":"PR:C6Y4C7"}


id: PBO:0031163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycine_import","termid":"PBO:0031163"}


id: GO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"amino-acid betaine catabolic process","synonyms":[{"name":"betaine breakdown","type":"exact"},{"name":"betaine catabolic process","type":"exact"},{"name":"betaine catabolism","type":"exact"},{"name":"betaine degradation","type":"exact"}],"termid":"GO:0006579"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:20413706","PMID:12857784","GOC:vk","PMID:17287255","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: PBO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 5","termid":"PBO:0071758"}


id: PBO:0083609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a protein; completely overlaps the uncharacterized gene YKR075C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083609"}


id: GO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"positively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of homocysteine metabolic process","synonyms":[{"name":"activation of homocysteine metabolic process","type":"narrow"},{"name":"positive regulation of Hcy metabolic process","type":"exact"},{"name":"positive regulation of Hcy metabolism","type":"exact"},{"name":"positive regulation of homocysteine metabolism","type":"exact"},{"name":"stimulation of homocysteine metabolic process","type":"narrow"},{"name":"up regulation of homocysteine metabolic process","type":"exact"},{"name":"up-regulation of homocysteine metabolic process","type":"exact"},{"name":"upregulation of homocysteine metabolic process","type":"exact"}],"termid":"GO:0050668"}


id: GO:1905066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:25034767","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905066)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905066"}


id: PBO:0084290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral subunit of SAGA histone acetyltransferase complex; regulates transcription of a subset of SAGA-regulated genes, required for the Ubp8p association with SAGA and for H2B deubiquitylation","termid":"PBO:0084290"}


id: FYPO:0005103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"curved elongated vegetative cell","synonyms":[{"name":"curved elongated cell","type":"exact"},{"name":"curved elongated cell during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005103"}


id: GO:0071041
data:
  {"annotated_genes":["SJAG_03745","SJAG_02621","SJAG_03047","SJAG_03680","SJAG_01717","SJAG_04574","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109963,106359,114080,83817,87748,98135,102071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of antisense transcripts, i.e. transcripts that were produced from the antisense strand of a gene that produces a gene product and which often have a regulatory effect on the transcription of that gene product.","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA metabolic process","termid":"GO:0042868"},{"relation_name":"is_a","term_name":"nuclear ncRNA surveillance","termid":"GO:0071029"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_02621":null,"SJAG_03047":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"antisense RNA transcript catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071041","terms_by_termid":{"GO:0071040":null}}


id: PR:000027541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"Spom-ste11/UnMod","type":"exact"}],"termid":"PR:000027541"}


id: PBO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystroglycan 1","termid":"PBO:0044533"}


id: PBO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous iron transporter Pcl1","termid":"PBO:0003049"}


id: FYPO:0007873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal exocytosis","synonyms":[{"name":"exocytosis defects","type":"exact"}],"termid":"FYPO:0007873"}


id: PBO:0069124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 374, pseudogene","termid":"PBO:0069124"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: PBO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, predicted histone demethylase Lid2","termid":"PBO:0004239"}


id: PBO:0046134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF5 divergent transcript","termid":"PBO:0046134"}


id: PBO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 2","termid":"PBO:0042433"}


id: FYPO:0007103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles during meiosis I, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:22292001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle collapse","termid":"FYPO:0007083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"spindle collapse during meiosis I","synonyms":[{"name":"spindle collapse during first meiotic nuclear division","type":"exact"},{"name":"broken spindle during meiosis I","type":"related"},{"name":"meiotic spindle collapse during meiosis I","type":"exact"},{"name":"spindle breakage during meiosis I","type":"related"}],"termid":"FYPO:0007103"}


id: GO:0072396
data:
  {"annotated_genes":["SJAG_03048","SJAG_01805","SJAG_04183","SJAG_00082","SJAG_01837","SJAG_04140","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98108,112685,107080,89391,85471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[99927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[85476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90139,98121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072408","GO:0072405"],"synonyms":[{"name":"G1/S transition checkpoint effector process","type":"related"},{"name":"G2/M transition checkpoint effector process","type":"related"},{"name":"cell cycle checkpoint effector process","type":"exact"},{"name":"response to G1/S transition checkpoint signaling","type":"related"},{"name":"response to G2/M transition checkpoint signaling","type":"related"},{"name":"response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:0072396","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0004377
data:
  {"annotated_genes":["SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112752],"is_not":false,"summary":null,"term":"GO:0004377"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP-alpha-D-mannose = an alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP + 2 H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->2)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29523","MetaCyc:RXN-5464"],"synonyms":[{"name":"GDP-D-mannose:D-Man-alpha-(1->3)-[D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 2-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"oligosaccharide-lipid mannosyltransferase activity","type":"related"}],"termid":"GO:0004377","terms_by_termid":{"GO:0004377":null}}


id: PBO:0091790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 5' UTR of SPBC365.16","termid":"PBO:0091790"}


id: PBO:0091130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1","termid":"PBO:0091130"}


id: GO:1990725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cord factor, an M. tuberculosis cell wall glycolipid, and transmitting a signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23602766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cord factor receptor activity","secondary_identifiers":["Wikipedia:Cord_factor"],"synonyms":[{"name":"TMD receptor activity","type":"exact"},{"name":"trehalose 6,6'-dimycolate receptor activity","type":"exact"}],"termid":"GO:1990725"}


id: PBO:0055827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 2","termid":"PBO:0055827"}


id: PR:Q96WV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02555","PRO:DNx","PANTHER:PTHR19876:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.04","secondary_identifiers":["UniProtKB:Q96WV5"],"synonyms":[{"name":"Spom972h-COPA","type":"exact"},{"name":"alpha-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV5"}


id: GO:0102250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogenphosphate + a linear malto-oligosaccharide = alpha-D-glucose 1-phosphate + a linear malto-oligosaccharide.","definition_xrefs":["GOC:pz","EC:2.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"linear malto-oligosaccharide phosphorylase activity","secondary_identifiers":["MetaCyc:RXN-12392"],"termid":"GO:0102250"}


id: GO:0033071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin metabolic process","synonyms":[{"name":"vancomycin metabolism","type":"exact"}],"termid":"GO:0033071"}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: PBO:0059930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 16","termid":"PBO:0059930"}


id: GO:0007502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive tract mesoderm over time, from its formation to the mature structure. The digestive tract mesoderm is portion of the middle layer of the three primary germ layers of the embryo which will go on to form part of the digestive tract of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract mesoderm development","termid":"GO:0007502"}


id: RO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s determined by f if and only if s is a type of system, and f is a material entity that is part of s, such that f exerts a strong causal influence on the functioning of s, and the removal of f would cause the collapse of s.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"determined_by_part_of","termid":"RO:0002509"},{"relation_name":"is_a","term_name":"causally_influenced_by","termid":"RO:0002559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by","termid":"RO:0002507"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: PBO:0080028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 14, pseudogene","termid":"PBO:0080028"}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:ai","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: FYPO:0006406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiotic cell cycle","synonyms":[{"name":"abnormal SPB morphology during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006406"}


id: FYPO:0004405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM335. Cells stop growing (and may die) at a concentration of JM335 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to JM335","synonyms":[{"name":"hypersensitive to JM335","type":"exact"},{"name":"sensitive to JM335 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM335 during vegetative growth","type":"exact"}],"termid":"FYPO:0004405"}


id: MOD:00880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 6x(13)C labeled 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:16526082","Unimod:464","PubMed:15536630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:00880"}


id: PBO:0086796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL112C is contained within TEL02L","termid":"PBO:0086796"}


id: GO:0006146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenine, 6-aminopurine, one of the 5 main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"adenine metabolic process","termid":"GO:0046083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"adenine catabolic process","synonyms":[{"name":"adenine breakdown","type":"exact"},{"name":"adenine catabolism","type":"exact"},{"name":"adenine degradation","type":"exact"}],"termid":"GO:0006146"}


id: GO:1900940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900940"}


id: GO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to chronological cell aging, occurring in non-dividing cells.","definition_xrefs":["GOC:dph","GOC:jh","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in chronological cell aging (obsolete GO:0001305)","synonyms":[{"name":"progressive alteration of chromatin during chronological cell ageing","type":"related"},{"name":"progressive alteration of chromatin during chronological cell aging","type":"related"}],"termid":"GO:0001305"}


id: PBO:0027592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0027592"}


id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["PMID:7576634","GO_REF:0000059","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of choline O-acetyltransferase activity","termid":"GO:1902769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of choline O-acetyltransferase activity","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: PBO:0041020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 3","termid":"PBO:0041020"}


id: PATO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being seperated into two contiguous wholes.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broken into two pieces","termid":"PATO:0002080"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0075690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 1 pseudogene 1","termid":"PBO:0075690"}


id: GO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["RESID:AA0237","RESID:AA0231","RESID:AA0295","RESID:AA0168","RESID:AA0169","GOC:pr","RESID:AA0040"],"gene_count":0,"genotype_count":0,"name":"obsolete protein ADP-ribosylation (obsolete GO:0006471)","synonyms":[{"name":"protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0006471"}


id: PBO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str2","termid":"PBO:0000369"}


id: FYPO:0002476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000257","FYPO:0000005","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"viable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"viable vegetative misshapen vacuolated cell","type":"related"},{"name":"viable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0002476"}


id: GO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion","synonyms":[{"name":"activation of locomotion","type":"narrow"},{"name":"stimulation of locomotion","type":"narrow"},{"name":"up regulation of locomotion","type":"exact"},{"name":"up-regulation of locomotion","type":"exact"},{"name":"upregulation of locomotion","type":"exact"}],"termid":"GO:0040017"}


id: GO:1902664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23444136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"positive regulation of protein lipidation","termid":"GO:1903061"},{"relation_name":"positively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"activation of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902664"}


id: GO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dAMP metabolic process","synonyms":[{"name":"dAMP metabolism","type":"exact"}],"termid":"GO:0046053"}


id: PBO:0040937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 8","termid":"PBO:0040937"}


id: PR:Q10221
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.14c","synonyms":[{"name":"Spom972h-rng8","type":"exact"}],"termid":"PR:Q10221"}


id: GO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein lipase activity","termid":"GO:0051004"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride lipase activity","termid":"GO:0061365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein lipase activity","synonyms":[{"name":"activation of lipoprotein lipase activity","type":"narrow"},{"name":"stimulation of lipoprotein lipase activity","type":"narrow"},{"name":"up regulation of lipoprotein lipase activity","type":"exact"},{"name":"up-regulation of lipoprotein lipase activity","type":"exact"},{"name":"upregulation of lipoprotein lipase activity","type":"exact"}],"termid":"GO:0051006"}


id: PBO:0079232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC7B antisense RNA 1","termid":"PBO:0079232"}


id: PBO:0035923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035923"}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19843166","PMID:12140278","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: PBO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 1","termid":"PBO:0052700"}


id: PR:O94327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.10 gene.","definition_xrefs":["UniProtKB:O94327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.10","synonyms":[{"name":"Spom972h-SPBC725.10","type":"exact"}],"termid":"PR:O94327"}


id: FYPO:0003351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the kinetochore of a chromosome for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased duration of protein localization to kinetochore during vegetative growth","synonyms":[{"name":"increased duration of protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to kinetochore during mitotic cell cycle","type":"related"},{"name":"prolonged protein localization to kinetochore during vegetative growth","type":"exact"}],"termid":"FYPO:0003351"}


id: PBO:0050451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOATZ cilia and flagella associated protein","termid":"PBO:0050451"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: GO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural retina development","termid":"GO:0003407"}


id: PBO:0082950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic nucleoporin required for polyadenylated mRNA export; contains a nuclear export signal; when bound to inositol hexakisphosphate (IP6), functions as an activator for the Dbp5p ATPase activity at the nuclear pore complex during mRNA export; mediates translation initiation; required for efficient translation termination","termid":"PBO:0082950"}


id: GO:0007583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete killer activity (obsolete GO:0007583)","synonyms":[{"name":"killer activity","type":"exact"}],"termid":"GO:0007583"}


id: PBO:0028341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028341"}


id: PBO:0034727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cereviaie YER035W and YGL222C","termid":"PBO:0034727"}


id: PBO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX19","termid":"PBO:0043770"}


id: PBO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 4","termid":"PBO:0043642"}


id: GO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular permeability","synonyms":[{"name":"down regulation of vascular permeability","type":"exact"},{"name":"down-regulation of vascular permeability","type":"exact"},{"name":"downregulation of vascular permeability","type":"exact"},{"name":"inhibition of vascular permeability","type":"narrow"}],"termid":"GO:0043116"}


id: PBO:0089991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Mam33","termid":"PBO:0089991"}


id: FYPO:0007976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during anaphase B in which the duration of interpolar microtubule growth events is longer.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"increased duration of interpolar microtubule growth events during anaphase B","termid":"FYPO:0007976"}


id: PBO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 13 pseudogene","termid":"PBO:0062143"}


id: PBO:0034093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Ib_bouton","termid":"PBO:0034093"}


id: GO:0060208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is heightened follicular activity.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proestrus","termid":"GO:0060208"}


id: GO:0035090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Retaining the established polarization of a cell along its apical/basal axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10130:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0065968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog B","termid":"PBO:0065968"}


id: GO:0102841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:11607123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8302"],"termid":"GO:0102841"}


id: PBO:0057972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689d-2","termid":"PBO:0057972"}


id: GO:0005779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of peroxisomal membrane (obsolete GO:0005779)","synonyms":[{"name":"integral to peroxisomal membrane","type":"narrow"}],"termid":"GO:0005779"}


id: PBO:0069881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1169, pseudogene","termid":"PBO:0069881"}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: FYECO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nitrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNO3","synonyms":[{"name":"+ silver nitrate","type":"exact"}],"termid":"FYECO:0000250"}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: PBO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIC subunit Sfc7 (predicted)","termid":"PBO:0002843"}


id: FYPO:0000928
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115360,115361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115339,115332,115331,115343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000928","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0078186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 3-1","termid":"PBO:0078186"}


id: PBO:0030663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_leucine_import","termid":"PBO:0030663"}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["GOC:nc","PMID:23201774","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: PBO:0061497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1 like","termid":"PBO:0061497"}


id: PBO:0053076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladybird homeobox 2","termid":"PBO:0053076"}


id: PBO:0041066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein","termid":"PBO:0041066"}


id: PBO:0059920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 6","termid":"PBO:0059920"}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: GO:1905294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rl","PMID:15073157","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell differentiation","synonyms":[{"name":"activation of neural crest cell differentiation","type":"narrow"},{"name":"up regulation of neural crest cell differentiation","type":"exact"},{"name":"up-regulation of neural crest cell differentiation","type":"exact"},{"name":"upregulation of neural crest cell differentiation","type":"exact"}],"termid":"GO:1905294"}


id: PBO:0038730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 25","termid":"PBO:0038730"}


id: PBO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7","termid":"PBO:0042271"}


id: PBO:0062663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily E member 1 pseudogene","termid":"PBO:0062663"}


id: GO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071180"}


id: PBO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43 pseudogene 3","termid":"PBO:0044762"}


id: PBO:0063870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGB opposite strand 1","termid":"PBO:0063870"}


id: FYPO:0004593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle, and after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype following normal mitosis","synonyms":[{"name":"abnormal cell phenotype following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and interphase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitotic nuclear division","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004593"}


id: SO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that base-pairs to a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_region","synonyms":[{"name":"anchor region","type":"exact"}],"termid":"SO:0000931"}


id: PBO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator (predicted)","termid":"PBO:0001353"}


id: PBO:0054555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1956","termid":"PBO:0054555"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: PBO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor accessory protein","termid":"PBO:0051586"}


id: GO:0018495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 2-ketocyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0018495"}


id: GO:0004852
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92006],"is_not":false,"summary":null,"term":"GO:0004852"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylbilane = H2O + uroporphyrinogen III.","definition_xrefs":["RHEA:18965","EC:4.2.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"uroporphyrinogen-III synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:UROGENIIISYN-RXN","Reactome:R-HSA-189488","KEGG_REACTION:R03165"],"synonyms":[{"name":"URO-synthase activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing) activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing; uroporphyrinogen-III-forming)","type":"related"},{"name":"porphobilinogenase activity","type":"related"},{"name":"uroporphyrinogen III cosynthase activity","type":"related"},{"name":"uroporphyrinogen isomerase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthetase activity","type":"related"}],"termid":"GO:0004852","terms_by_termid":{"GO:0004852":null}}


id: PBO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein (fungal and protazoan)","termid":"PBO:0000934"}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0067584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 743, pseudogene","termid":"PBO:0067584"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_02023","SJAG_01817","SJAG_00516","SJAG_00136","SJAG_00212","SJAG_01471","SJAG_01913","SJAG_03406","SJAG_01397","SJAG_01447","SJAG_05294","SJAG_04955","SJAG_04015","SJAG_02782"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83473,85313,85637,87555,91280,92259,94604,95625,95703,97361,98403,99683,105738,114722],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:11935287","PMID:16087708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: PBO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_inhibitor_of","termid":"PBO:0000013"}


id: PBO:0110389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3B","termid":"PBO:0110389"}


id: GO:0102851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-16:0-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-18:2-2-16:0-phosphatidylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.43","MetaCyc:RXN-8318"],"termid":"GO:0102851"}


id: PBO:0027522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_cytokinesis_checkpoint_signaling","termid":"PBO:0027522"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: PBO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1B (pseudogene)","termid":"PBO:0047821"}


id: GO:0042135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter catabolic process (obsolete GO:0042135)","synonyms":[{"name":"neurotransmitter breakdown","type":"exact"},{"name":"neurotransmitter catabolism","type":"exact"},{"name":"neurotransmitter degradation","type":"exact"}],"termid":"GO:0042135"}


id: GO:0070829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterochromatin maintenance (obsolete GO:0070829)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing","type":"related"},{"name":"maintenance of chromatin silencing","type":"related"},{"name":"maintenance of heterochromatic silencing","type":"related"}],"termid":"GO:0070829"}


id: PBO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AZ member 1 pseudogene","termid":"PBO:0062227"}


id: GO:0009110
data:
  {"annotated_genes":["SJAG_02420","SJAG_02421","SJAG_00815","SJAG_00707","SJAG_02360","SJAG_02491","SJAG_00827","SJAG_04282","SJAG_03679","SJAG_04156","SJAG_02406","SJAG_00043","SJAG_02408","SJAG_03538","SJAG_03362","SJAG_01543","SJAG_00252","SJAG_00691","SJAG_01935","SJAG_00673","SJAG_03275","SJAG_04845","SJAG_04866","SJAG_03632","SJAG_01126","SJAG_00376","SJAG_00283","SJAG_00491","SJAG_05200","SJAG_01383","SJAG_04711","SJAG_01970","SJAG_00106","SJAG_01881","SJAG_00480","SJAG_04067","SJAG_02225","SJAG_01054","SJAG_04481","SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[74994,110070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[100708,109640,85776,101885,104193,100562,108325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[109319,84341,94413,94417,98488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[109646,84492],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95365,111680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110364,96585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[91119,63939,83153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[91120,83155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[82895,111714,96863,102595,106246,113169,102792,110751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[109979,103199,95199,89877,112014,109548,109542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[112015,95200,109980,109543,109549,89878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[95202,106319,106320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin anabolism","type":"exact"},{"name":"vitamin biosynthesis","type":"exact"},{"name":"vitamin formation","type":"exact"},{"name":"vitamin synthesis","type":"exact"}],"termid":"GO:0009110","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: PBO:0062636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 5 pseudogene","termid":"PBO:0062636"}


id: FYPO:0002214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with abnormal morphology (i.e. size, shape, or structure).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, abnormal germ tube morphology (obsolete FYPO:0002214)","synonyms":[{"name":"cell population inviable after spore germination, abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore population, abnormal germ tube morphology","type":"exact"},{"name":"inviable population of undivided germinated spores with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002214"}


id: GO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization","synonyms":[{"name":"pattern formation","type":"related"}],"termid":"GO:0003002"}


id: PBO:0017795
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14B","termid":"PBO:0017795"}


id: PBO:0016927
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NSR1","termid":"PBO:0016927"}


id: GO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity which is a network of tubules and vessicles and is part of the contractile vacuole complex. It is involved in the discharge of water externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spongiome","termid":"GO:0062160"}


id: PBO:0041294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 2","termid":"PBO:0041294"}


id: PBO:0056793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 2","termid":"PBO:0056793"}


id: PBO:0085989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for proliferation or remodeling of the ER that is caused by overexpression of Hmg2p; may interact with ribosomes, based on co-purification experiments; HER1 has a paralog, GIP3, that arose from the whole genome duplication","termid":"PBO:0085989"}


id: GO:0003038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003038"}


id: PBO:0012839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of rudimentary homolog Erh1","termid":"PBO:0012839"}


id: GO:1900946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"positively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprene metabolic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"activation of hemiterpene metabolic process","type":"narrow"},{"name":"activation of hemiterpene metabolism","type":"narrow"},{"name":"activation of isoprene metabolic process","type":"narrow"},{"name":"activation of isoprene metabolism","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"positive regulation of hemiterpene metabolic process","type":"exact"},{"name":"positive regulation of hemiterpene metabolism","type":"exact"},{"name":"positive regulation of isoprene metabolism","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up regulation of hemiterpene metabolic process","type":"exact"},{"name":"up regulation of hemiterpene metabolism","type":"exact"},{"name":"up regulation of isoprene metabolic process","type":"exact"},{"name":"up regulation of isoprene metabolism","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up-regulation of hemiterpene metabolic process","type":"exact"},{"name":"up-regulation of hemiterpene metabolism","type":"exact"},{"name":"up-regulation of isoprene metabolic process","type":"exact"},{"name":"up-regulation of isoprene metabolism","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"upregulation of hemiterpene metabolic process","type":"exact"},{"name":"upregulation of hemiterpene metabolism","type":"exact"},{"name":"upregulation of isoprene metabolic process","type":"exact"},{"name":"upregulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900946"}


id: GO:1903212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating-type region heterochromatin.","definition_xrefs":["PMID:18761674","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mating-type region heterochromatin","synonyms":[{"name":"protein localisation in mating-type region heterochromatin","type":"exact"},{"name":"protein localisation to mating-type region heterochromatin","type":"exact"},{"name":"protein localization in mating-type region heterochromatin","type":"exact"}],"termid":"GO:1903212"}


id: GO:0046894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Active site formation via the transient amidinylation of peptidyl-cysteine to form peptidyl-S-amidino-L-cysteine.","definition_xrefs":["RESID:AA0335"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-amidino-L-cysteine (obsolete GO:0046894)","termid":"GO:0046894"}


id: GO:1902748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:17592637","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"positively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens fiber cell differentiation","synonyms":[{"name":"activation of lens fiber cell differentiation","type":"narrow"},{"name":"activation of lens fibre cell differentiation","type":"narrow"},{"name":"positive regulation of lens fibre cell differentiation","type":"exact"},{"name":"up regulation of lens fiber cell differentiation","type":"exact"},{"name":"up regulation of lens fibre cell differentiation","type":"exact"},{"name":"up-regulation of lens fiber cell differentiation","type":"exact"},{"name":"up-regulation of lens fibre cell differentiation","type":"exact"},{"name":"upregulation of lens fiber cell differentiation","type":"exact"},{"name":"upregulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902748"}


id: FYPO:0002932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature snoRNA level","synonyms":[{"name":"decreased mature small nucleolar RNA level","type":"exact"},{"name":"decreased mature snoRNA accumulation","type":"related"},{"name":"decreased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snoRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snoRNA transcript level","type":"broad"},{"name":"decreased snoRNA level","type":"broad"},{"name":"reduced mature snoRNA level","type":"exact"}],"termid":"FYPO:0002932"}


id: PBO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0036203"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PBO:0070610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 78","termid":"PBO:0070610"}


id: PBO:0073794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A1 antisense RNA 1","termid":"PBO:0073794"}


id: MOD:00604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2x(2)H labeled monomethylated L-lysine.","definition_xrefs":["PubMed:15525938","Unimod:284"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6-methyl-L-lysine","termid":"MOD:00085"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(2)H monomethylated L-lysine","synonyms":[{"name":"Deuterium Methylation of Lysine","type":"related"},{"name":"Methyl:2H(2)","type":"related"}],"termid":"MOD:00604"}


id: PBO:0059986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 6","termid":"PBO:0059986"}


id: PBO:0073864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1","termid":"PBO:0073864"}


id: PBO:0076930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor binding to IGHM enhancer 3","termid":"PBO:0076930"}


id: GO:1905308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["PMID:26108447","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to miconazole","termid":"GO:1905307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to miconazole","termid":"GO:1905308"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:25046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12070","UM-BBD_reactionID:r1622","EC:3.7.1.14"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: PBO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 13","termid":"PBO:0070547"}


id: PBO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor Sak1","termid":"PBO:0001906"}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["EC:4.2.1.112","RHEA:17885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["KEGG_REACTION:R05380","MetaCyc:R141-RXN","UM-BBD_reactionID:r0591"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: GO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"positively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to self antigen","synonyms":[{"name":"activation of tolerance induction to self antigen","type":"narrow"},{"name":"stimulation of tolerance induction to self antigen","type":"narrow"},{"name":"up regulation of tolerance induction to self antigen","type":"exact"},{"name":"up-regulation of tolerance induction to self antigen","type":"exact"},{"name":"upregulation of tolerance induction to self antigen","type":"exact"}],"termid":"GO:0002651"}


id: GO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cupula development","termid":"GO:0048887"}


id: PBO:0090914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sak1","termid":"PBO:0090914"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: GO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to becoming a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate commitment","termid":"GO:0042684"}


id: GO:0009150
data:
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chemical reactions and pathways involving a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic 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id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: GO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal DNA.","definition_xrefs":["PMID:11898023"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation (obsolete GO:0010216)","synonyms":[{"name":"maintenance of DNA methylation","type":"broad"}],"termid":"GO:0010216"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: PBO:0081579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 506","termid":"PBO:0081579"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz","EC:2.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"2-oxo-6-methylthiohexanoate aminotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4345"],"termid":"GO:0103105"}


id: GO:0030781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 6-O-methylnorlaudanosoline = S-adenosyl-L-homocysteine + nororientaline.","definition_xrefs":["EC:2.1.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","secondary_identifiers":["RHEA:11892","MetaCyc:2.1.1.121-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030781"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 1","termid":"PBO:0045479"}


id: GO:0033859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving furaldehyde, a furan ring-containing aldehyde compound which can be formed from the thermal decomposition of biomass.","definition_xrefs":["GOC:jp","PMID:15338422","PMID:16652391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"furaldehyde metabolic process","termid":"GO:0033859"}


id: PBO:0083915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; nucleates the formation of linear actin filaments; involved in processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; activity is regulated by Hof1p and by the Bud14p-Kel1p-Kel2p complex; dephosphorylated and delocalized from the division site in a Glc7p/Ref2p-dependent manner; functionally redundant with BNI1","termid":"PBO:0083915"}


id: GO:0015479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete outer membrane exporter porin (obsolete GO:0015479)","synonyms":[{"name":"outer membrane exporter porin","type":"exact"}],"termid":"GO:0015479"}


id: PBO:0074904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 76","termid":"PBO:0074904"}


id: PBO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0034022"}


id: GO:0032385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"positive regulation of intracellular sterol transport","termid":"GO:0032382"},{"relation_name":"is_a","term_name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"},{"relation_name":"positively_regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular cholesterol transport","synonyms":[{"name":"activation of intracellular cholesterol transport","type":"narrow"},{"name":"stimulation of intracellular cholesterol transport","type":"narrow"},{"name":"up regulation of intracellular cholesterol transport","type":"exact"},{"name":"up-regulation of intracellular cholesterol transport","type":"exact"},{"name":"upregulation of intracellular cholesterol transport","type":"exact"}],"termid":"GO:0032385"}


id: PBO:0068741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 4, pseudogene","termid":"PBO:0068741"}


id: GO:2000196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"positively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female gonad development","synonyms":[{"name":"positive regulation of ovarian development","type":"exact"},{"name":"positive regulation of ovary development","type":"exact"}],"termid":"GO:2000196"}


id: PBO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_file_curator","termid":"PBO:0110121"}


id: PBO:0046473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 1","termid":"PBO:0046473"}


id: PBO:0068753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 8, pseudogene","termid":"PBO:0068753"}


id: PBO:0080162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3B","termid":"PBO:0080162"}


id: GO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tryptophan + acetyl-CoA = N-acetyl-D-tryptophan + CoA + H+.","definition_xrefs":["RHEA:10060","EC:2.3.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-tryptophan N-acetyltransferase activity","secondary_identifiers":["MetaCyc:D-TRYPTOPHAN-N-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R02481"],"synonyms":[{"name":"D-tryptophan acetyltransferase activity","type":"related"},{"name":"acetyl-CoA-D-tryptophan-alpha-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:D-tryptophan N-acetyltransferase activity","type":"related"}],"termid":"GO:0047835"}


id: PBO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heat","termid":"PBO:0036029"}


id: PBO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor (predicted)","termid":"PBO:0004395"}


id: GO:0009733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to auxin","synonyms":[{"name":"response to auxin stimulus","type":"exact"}],"termid":"GO:0009733"}


id: GO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chloroplast ADPG pyrophosphorylase complex","termid":"GO:0030933"}


id: PBO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 3","termid":"PBO:0052110"}


id: PBO:0011472
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(mM min-1 ml-2)","termid":"PBO:0011472"}


id: GO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting sodium ions into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sequestering","termid":"GO:0043181"},{"relation_name":"part_of","term_name":"intracellular sodium ion homeostasis","termid":"GO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771","GO:0051179"],"is_obsolete":false,"name":"vacuolar sequestering of sodium ion","synonyms":[{"name":"sequestering of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sequestration of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sodium ion (Na+) retention in vacuole","type":"exact"},{"name":"sodium ion (Na+) storage in vacuole","type":"exact"},{"name":"vacuolar sequestering of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sequestration of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sodium ion (Na+) retention","type":"exact"},{"name":"vacuolar sodium ion (Na+) storage","type":"exact"}],"termid":"GO:0043182"}


id: GO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem I associated light-harvesting complex I; contains two proteins (usually about 24 and 21.5 kDa); has a fluorescence maximum between 680 and 690 nm.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PSI associated light-harvesting complex I","termid":"GO:0009518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I, LHCIa subcomplex","termid":"GO:0030083"}


id: PBO:0041924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS mRNA stabilizing lncRNA","termid":"PBO:0041924"}


id: GO:0075096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075096)","termid":"GO:0075096"}


id: SO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Incompatibility in the sequence due to some experimental problem.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_sequencing_information","secondary_identifiers":["BS:00125"],"synonyms":[{"name":"sequencing_information","type":"exact"}],"termid":"SO:0001082"}


id: PBO:0052856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-16","termid":"PBO:0052856"}


id: GO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the optic nerve. This process pertains to the physical shaping of a rudimentary structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve structural organization","synonyms":[{"name":"CN II structural organization","type":"related"},{"name":"optic nerve structural organisation","type":"exact"}],"termid":"GO:0021633"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: PBO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPLANE1 antisense RNA 1","termid":"PBO:0043799"}


id: PBO:0055773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNX1 antisense RNA 2","termid":"PBO:0055773"}


id: GO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corrin metabolic process","termid":"GO:0015009"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"corrin biosynthetic process","synonyms":[{"name":"corrin anabolism","type":"exact"},{"name":"corrin biosynthesis","type":"exact"},{"name":"corrin formation","type":"exact"},{"name":"corrin synthesis","type":"exact"}],"termid":"GO:0046140"}


id: PBO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 80","termid":"PBO:0042022"}


id: PATO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000747 coordination value (obsolete PATO:0000747)","termid":"PATO:0000747"}


id: PBO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit alpha","termid":"PBO:0047303"}


id: PBO:0084179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase (HAT) catalytic subunit of the SAS complex; acetylates free histones and nucleosomes and regulates transcriptional silencing; member of the MYSTacetyltransferase family; other members are Sas4p and Sas5p","termid":"PBO:0084179"}


id: GO:0106383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a dAMP from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:6605343","PMID:21829339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dAMP biosynthetic process","termid":"GO:0006170"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dAMP salvage","termid":"GO:0106383"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["PMID:19339990","CL:0000542","PMID:7679710","Wikipedia:High_endothelial_venules","CL:0002652","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: PBO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 16, pseudogene","termid":"PBO:0048895"}


id: PBO:0083858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATP synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Aim43p, ATP synthase subunits, and cytochrome bc1 complex assembly factors; interacts with Arh1p, a mitochondrial oxidoreductase; deletion mutant has a respiratory growth defect","termid":"PBO:0083858"}


id: PBO:0017790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4 (predicted)","termid":"PBO:0017790"}


id: PBO:0063276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 2","termid":"PBO:0063276"}


id: GO:0006415
data:
  {"annotated_genes":["SJAG_02812","SJAG_05221","SJAG_02189","SJAG_00338","SJAG_01518","SJAG_02601","SJAG_02704","SJAG_01696","SJAG_00286","SJAG_00308","SJAG_00642","SJAG_03658","SJAG_05265","SJAG_04283","SJAG_03949","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61712,99155],"is_not":false,"summary":null,"term":"GO:0006415"},{"annotations":[112022,102992,113494,86576,90732,92114,105013,90731,105014,90399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[91124,97793,100478,94330,91564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[68366,66462,90400],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[107606],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).","definition_xrefs":["ISBN:019879276X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_00338":null,"SJAG_00642":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05221":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006443","GO:0006456"],"synonyms":[{"name":"protein synthesis termination","type":"broad"},{"name":"translation termination","type":"exact"},{"name":"translational complex disassembly","type":"exact"}],"termid":"GO:0006415","terms_by_termid":{"GO:0002184":null,"GO:0006415":null,"GO:0006449":null,"GO:0045905":null,"GO:0070126":null}}


id: PBO:0006194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by","termid":"PBO:0006194"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["UniProtKB:G2TRR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: SO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of contigs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"contig","termid":"SO:0000149"},{"relation_name":"is_a","term_name":"sequence_conflict","termid":"SO:0001085"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig_collection","synonyms":[{"name":"contig collection","type":"exact"}],"termid":"SO:0001462"}


id: GO:0046303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-nitropropane, a clear, colorless liquid with a mild, fruity odor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nitropropane biosynthetic process (obsolete GO:0046303)","synonyms":[{"name":"2-nitropropane anabolism","type":"exact"},{"name":"2-nitropropane biosynthesis","type":"exact"},{"name":"2-nitropropane biosynthetic process","type":"exact"},{"name":"2-nitropropane formation","type":"exact"},{"name":"2-nitropropane synthesis","type":"exact"}],"termid":"GO:0046303"}


id: PBO:0073868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 4","termid":"PBO:0073868"}


id: PBO:0041945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 5 pseudogene 1","termid":"PBO:0041945"}


id: PBO:0040754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain derived neurotrophic factor","termid":"PBO:0040754"}


id: GO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a sterol = UDP + an O-glucosylsterol.","definition_xrefs":["EC:2.4.1.173","RHEA:22724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sterol 3-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:STEROL-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-sterol beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-sterol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:sterol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:sterol glucosyltransferase activity","type":"exact"},{"name":"UDPG-SGTase activity","type":"related"},{"name":"UDPG:sterol glucosyltransferase activity","type":"exact"},{"name":"UDPglucose:sterol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"sterol 3beta-glucosyltransferase activity","type":"related"},{"name":"sterol glucosyltransferase activity","type":"exact"},{"name":"sterol-beta-D-glucosyltransferase activity","type":"related"},{"name":"sterol:UDPG glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-poriferasterol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sterol glucosyltransferase activity","type":"related"}],"termid":"GO:0016906"}


id: PBO:0110199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110199"}


id: GO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of podosome assembly","synonyms":[{"name":"activation of podosome assembly","type":"narrow"},{"name":"stimulation of podosome assembly","type":"narrow"},{"name":"up regulation of podosome assembly","type":"exact"},{"name":"up-regulation of podosome assembly","type":"exact"},{"name":"upregulation of podosome assembly","type":"exact"}],"termid":"GO:0071803"}


id: SO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated at transcription.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_regulated","synonyms":[{"name":"transcriptionally regulated","type":"exact"}],"termid":"SO:0000123"}


id: FYPO:0003819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000641","FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"decreased 5'-3' DNA helicase activity","synonyms":[{"name":"reduced 5'-3' DNA helicase activity","type":"exact"}],"termid":"FYPO:0003819"}


id: GO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"formate catabolic process","synonyms":[{"name":"formate breakdown","type":"exact"},{"name":"formate catabolism","type":"exact"},{"name":"formate degradation","type":"exact"},{"name":"formic acid catabolic process","type":"exact"},{"name":"formic acid catabolism","type":"exact"}],"termid":"GO:0042183"}


id: PBO:0083833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A","termid":"PBO:0083833"}


id: GO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which unfolded proteins are transported across the cytoplasmic membrane in Gram-positive and Gram-negative bacteria by the Sec complex, in a process involving proteolytic cleavage of an N-terminal signal peptide.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"protein transport by the Sec complex","synonyms":[{"name":"protein secretion by the Sec complex","type":"narrow"},{"name":"protein translocation by the Sec complex","type":"narrow"}],"termid":"GO:0043952"}


id: FYPO:0001591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal histidine import","termid":"FYPO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased histidine import","synonyms":[{"name":"decreased L-histidine import","type":"exact"},{"name":"decreased L-histidine import across plasma membrane","type":"exact"},{"name":"decreased histidine import during mitotic cell cycle","type":"related"},{"name":"decreased histidine import during vegetative growth","type":"exact"},{"name":"decreased histidine import into cell","type":"exact"},{"name":"decreased histidine uptake","type":"exact"},{"name":"reduced histidine import","type":"exact"}],"termid":"FYPO:0001591"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PBO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 1","termid":"PBO:0060513"}


id: PBO:0087210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A","termid":"PBO:0087210"}


id: PBO:0068147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 454","termid":"PBO:0068147"}


id: PBO:0076417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b","termid":"PBO:0076417"}


id: GO:0012511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcellular organelle of plant cells surrounded by 'half-unit' or a monolayer membrane instead of the more usual bilayer. The storage body has a droplet of triglyceride surrounded by a monolayer of phospholipids, interacting with the triglycerides and the hydrophilic head groups facing the cytosol, and containing major protein components called oleosins.","definition_xrefs":["ISBN:0943088372","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet","termid":"GO:0005811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"monolayer-surrounded lipid storage body","secondary_identifiers":["GO:0009520","Wikipedia:Oil_body"],"synonyms":[{"name":"oil body","type":"exact"},{"name":"oilbody","type":"exact"},{"name":"oleosome","type":"exact"},{"name":"spherosome","type":"exact"}],"termid":"GO:0012511"}


id: GO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.","definition_xrefs":["GOC:kad","PMID:16299173","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-alkenal reductase [NAD(P)+] activity","termid":"GO:0032440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-alkenal reductase (NADPH) activity","synonyms":[{"name":"NADPH:2-alkenal alpha,beta-hydrogenase activity","type":"exact"}],"termid":"GO:0035798"}


id: PBO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 49","termid":"PBO:0048338"}


id: GO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pulmonary valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve development","termid":"GO:0003177"}


id: FYPO:0000160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented DNA","synonyms":[{"name":"DNA fragmentation","type":"exact"},{"name":"fragmented nucleus","type":"related"}],"termid":"FYPO:0000160"}


id: FYPO:0005727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint occurs more slowly than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:21664573","PomBase:mah","PomBase:vw","PMID:19592249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased rate of deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"delayed inactivation of the SAC","type":"broad"},{"name":"delayed inactivation of the mitotic SAC","type":"exact"},{"name":"delayed inactivation of the mitotic spindle assembly checkpoint","type":"exact"},{"name":"reduced rate of deactivation of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005727"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: PBO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_cell_during_nitrogen_starvation","termid":"PBO:0036178"}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: PR:Q9US06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II-associated factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II-associated protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.03","secondary_identifiers":["UniProtKB:Q9US06"],"synonyms":[{"name":"Spom972h-PAF1","type":"exact"}],"termid":"PR:Q9US06"}


id: PBO:0028186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_plasma_membrane","termid":"PBO:0028186"}


id: PBO:0069223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 478, pseudogene","termid":"PBO:0069223"}


id: PBO:0053905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1195","termid":"PBO:0053905"}


id: GO:0016261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of selenocysteine, an essential component of glutathione peroxidase and some other proteins.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"selenocysteine catabolic process","synonyms":[{"name":"selenocysteine breakdown","type":"exact"},{"name":"selenocysteine catabolism","type":"exact"},{"name":"selenocysteine degradation","type":"exact"}],"termid":"GO:0016261"}


id: MOD:00533
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12845591","Unimod:172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shimadzu 12CNBS","synonyms":[{"name":"NBS","type":"related"},{"name":"Shimadzu NBS-12C","type":"related"}],"termid":"MOD:00533"}


id: GO:1902323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15340492","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"negatively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"negative regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"downregulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"inhibition of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid formation","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"negative regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902323"}


id: PR:P0CT82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.18c","synonyms":[{"name":"Spom972h-rpl4102","type":"exact"}],"termid":"PR:P0CT82"}


id: GO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.","definition_xrefs":["PMID:12865422","PMID:10589671","PMID:11743021"],"gene_count":0,"genotype_count":0,"name":"obsolete Sin3 complex (obsolete GO:0016580)","termid":"GO:0016580"}


id: GO:0097203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip or margin of the progressing circular lamella that engulfs a particle during phagocytosis. When the two lips of the cup fuse it is converted into a phagosome.","definition_xrefs":["PMID:20200225","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"phagocytic cup lip","termid":"GO:0097203"}


id: PBO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 1 pseudogene","termid":"PBO:0062151"}


id: GO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase activity","synonyms":[{"name":"stimulation of protein kinase activity","type":"narrow"},{"name":"up regulation of protein kinase activity","type":"exact"},{"name":"up-regulation of protein kinase activity","type":"exact"},{"name":"upregulation of protein kinase activity","type":"exact"}],"termid":"GO:0045860"}


id: PBO:0081352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 174","termid":"PBO:0081352"}


id: PBO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily B member 1","termid":"PBO:0044482"}


id: GO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is not disulfide or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors (obsolete GO:0050466)","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"exact"}],"termid":"GO:0050466"}


id: PBO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs3","termid":"PBO:0036392"}


id: PBO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 4","termid":"PBO:0051758"}


id: PBO:0036396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP4 complex regulatory subunit 3 Psy2 (predicted)","termid":"PBO:0036396"}


id: GO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral loop","secondary_identifiers":["NIF_Subcellular:sao1067215520","NIF_Subcellular:sao1354781919"],"synonyms":[{"name":"Schwann cell paranodal termination","type":"related"},{"name":"oligodendrocyte paranodal termination","type":"related"},{"name":"paranodal loop","type":"related"}],"termid":"GO:0043219"}


id: PR:Q9UT79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msc1 gene.","definition_xrefs":["UniProtKB:Q9UT79","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicopy suppressor of chk1 protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.11c","synonyms":[{"name":"Spom972h-msc1","type":"exact"}],"termid":"PR:Q9UT79"}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_00082","SJAG_04183","SJAG_04332","SJAG_01805","SJAG_03048","SJAG_01837","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98108,89391,85471,112685,107080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[99927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[85476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[98121,90139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = D-ribose 1,5-diphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:21216","EC:2.7.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphoribokinase activity","secondary_identifiers":["KEGG_REACTION:R01050","MetaCyc:PHOSPHORIBOKINASE-RXN"],"synonyms":[{"name":"ATP:D-ribose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphoribokinase (phosphorylating)","type":"related"}],"termid":"GO:0050195"}


id: PBO:0075374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 11","termid":"PBO:0075374"}


id: PBO:0051859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 5","termid":"PBO:0051859"}


id: PBO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase Isn1 (predicted)","termid":"PBO:0032762"}


id: SO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 3' strand of the nucleotide sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_restriction_enzyme_junction","synonyms":[{"name":"3' restriction enzyme junction","type":"exact"}],"termid":"SO:0001690"}


id: GO:1900224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900224)","synonyms":[{"name":"activation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"activation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"}],"termid":"GO:1900224"}


id: PBO:0043775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A1","termid":"PBO:0043775"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: PBO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB antisense RNA 1","termid":"PBO:0060234"}


id: PBO:0069131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 381, pseudogene","termid":"PBO:0069131"}


id: SO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which methylhypoxanthine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylinosine","termid":"SO:0001233"}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: GO:0005697
data:
  {"annotated_genes":["SJAG_03954","SJAG_01378","SJAG_04586","SJAG_01720","SJAG_03070","SJAG_02469","SJAG_01819","SJAG_00939","SJAG_05240","SJAG_00559","SJAG_05979","SJAG_03460","SJAG_01327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69585,86109,86110,91444,102146,103769,103878,103966,104032,104379,108802,110908,111859,112402],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[103768,103767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000333"}]},"cv_name":"cellular_component","definition":"Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.","definition_xrefs":["PMID:11884619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00559":null,"SJAG_00939":null,"SJAG_01327":null,"SJAG_01378":null,"SJAG_01720":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"telomerase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005697","terms_by_termid":{"GO:0000333":null,"GO:0005697":null}}


id: GO:0051769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051772"],"synonyms":[{"name":"regulation of NO synthase biosynthesis","type":"exact"},{"name":"regulation of NO synthase biosynthetic process","type":"exact"},{"name":"regulation of NOS biosynthesis","type":"exact"},{"name":"regulation of NOS biosynthetic process","type":"exact"},{"name":"regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051769"}


id: PBO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family (predicted)","termid":"PBO:0002011"}


id: PBO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member J","termid":"PBO:0047238"}


id: GO:0044156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane part that forms a specialized region of connection between two host cells or between a host cell and the host extracellular matrix. At a host cell junction, anchoring proteins extend through the host plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell plasma membrane","termid":"GO:0020002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell junction","termid":"GO:0044156"}


id: GO:1904729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18768481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal lipid absorption","termid":"GO:1904729"}


id: MOD:00646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to either N-acetyl-L-cysteine or S-acetyl-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"acetylated L-cysteine","synonyms":[{"name":"AcCys","type":"exact"}],"termid":"MOD:00646"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: GO:0006986
data:
  {"annotated_genes":["SJAG_00790","SJAG_04262","SJAG_02875","SJAG_01516","SJAG_04567","SJAG_04118","SJAG_04471","SJAG_02601","SJAG_00226","SJAG_00681","SJAG_00403","SJAG_04283","SJAG_03841","SJAG_03611","SJAG_03482","SJAG_04103","SJAG_03815","SJAG_01768","SJAG_00530","SJAG_04435","SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105873,105874,98666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[87846,109774,94391,110176,113379,102993,90088,105430,112023,96954,113222,110046,112789,88505,85127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[88654,84976],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[83774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_02875":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to unfolded protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heat shock protein activity","type":"related"}],"termid":"GO:0006986","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null}}


id: PBO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-33","termid":"PBO:0051298"}


id: GO:0072075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a metanephric mesenchyme from an initial condition to its mature state. This process begins with the formation of metanephric mesenchyme and ends with the mature structure. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchyme development","termid":"GO:0072075"}


id: PBO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammecr1","termid":"PBO:0001893"}


id: GO:0007341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of zona pellucida","termid":"GO:0007341"}


id: PBO:0044295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC4 antisense RNA 1","termid":"PBO:0044295"}


id: PR:Q9UU84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug170 gene.","definition_xrefs":["UniProtKB:Q9UU84","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 170 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.03","synonyms":[{"name":"Spom972h-mug170","type":"exact"}],"termid":"PR:Q9UU84"}


id: FYPO:0006674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished during conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mating","synonyms":[{"name":"abolished protein localisation to nucleus during mating","type":"exact"},{"name":"abolished protein localization to nucleus during conjugation","type":"exact"},{"name":"nuclear exclusion during mating","type":"related"},{"name":"nuclear protein exclusion during mating","type":"related"},{"name":"protein localization to nucleus abolished during mating","type":"exact"}],"termid":"FYPO:0006674"}


id: PBO:0041034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2D, pseudogene","termid":"PBO:0041034"}


id: PBO:0042098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC169-SOHLH2 readthrough","termid":"PBO:0042098"}


id: PBO:0058554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6133","termid":"PBO:0058554"}


id: GO:1904246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["PMID:19460348","GOC:TermGenie","GO_REF:0000059","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of polynucleotide adenylyltransferase activity","termid":"GO:1904245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polynucleotide adenylyltransferase activity","synonyms":[{"name":"down regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of NTP polymerase activity","type":"exact"},{"name":"down regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"down regulation of RNA formation factors, PF1","type":"related"},{"name":"down regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"down regulation of poly(A) hydrolase activity","type":"exact"},{"name":"down regulation of poly(A) polymerase activity","type":"exact"},{"name":"down regulation of poly(A) synthetase activity","type":"exact"},{"name":"down regulation of poly-A polymerase activity","type":"exact"},{"name":"down regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of polyadenylate polymerase activity","type":"exact"},{"name":"down regulation of polyadenylate synthetase activity","type":"exact"},{"name":"down regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"down regulation of polyadenylic polymerase activity","type":"exact"},{"name":"down regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"down-regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"down-regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"down-regulation of NTP polymerase activity","type":"exact"},{"name":"down-regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"down-regulation of RNA formation factors, PF1","type":"related"},{"name":"down-regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"down-regulation of poly(A) hydrolase activity","type":"exact"},{"name":"down-regulation of poly(A) polymerase activity","type":"exact"},{"name":"down-regulation of poly(A) synthetase activity","type":"exact"},{"name":"down-regulation of poly-A polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"down-regulation of polyadenylate polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylate synthetase activity","type":"exact"},{"name":"down-regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylic polymerase activity","type":"exact"},{"name":"down-regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"downregulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"downregulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"downregulation of NTP polymerase activity","type":"exact"},{"name":"downregulation of RNA adenylating enzyme activity","type":"exact"},{"name":"downregulation of RNA formation factors, PF1","type":"related"},{"name":"downregulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"downregulation of poly(A) hydrolase activity","type":"exact"},{"name":"downregulation of poly(A) polymerase activity","type":"exact"},{"name":"downregulation of poly(A) synthetase activity","type":"exact"},{"name":"downregulation of poly-A polymerase activity","type":"exact"},{"name":"downregulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of polyadenylate polymerase activity","type":"exact"},{"name":"downregulation of polyadenylate synthetase activity","type":"exact"},{"name":"downregulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"downregulation of polyadenylic polymerase activity","type":"exact"},{"name":"downregulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"inhibition of AMP polynucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of ATP-polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of ATP:polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of ATP:polynucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of NTP polymerase activity","type":"narrow"},{"name":"inhibition of RNA adenylating enzyme activity","type":"narrow"},{"name":"inhibition of RNA formation factors, PF1","type":"related"},{"name":"inhibition of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"narrow"},{"name":"inhibition of poly(A) hydrolase activity","type":"narrow"},{"name":"inhibition of poly(A) polymerase activity","type":"narrow"},{"name":"inhibition of poly(A) synthetase activity","type":"narrow"},{"name":"inhibition of poly-A polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylate nucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of polyadenylate polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylate synthetase activity","type":"narrow"},{"name":"inhibition of polyadenylic acid polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylic polymerase activity","type":"narrow"},{"name":"inhibition of polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of terminal riboadenylate transferase activity","type":"narrow"},{"name":"negative regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"negative regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"negative regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"negative regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"negative regulation of NTP polymerase activity","type":"exact"},{"name":"negative regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"negative regulation of RNA formation factors, PF1","type":"related"},{"name":"negative regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"negative regulation of poly(A) hydrolase activity","type":"exact"},{"name":"negative regulation of poly(A) polymerase activity","type":"exact"},{"name":"negative regulation of poly(A) synthetase activity","type":"exact"},{"name":"negative regulation of poly-A polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of polyadenylate polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylate synthetase activity","type":"exact"},{"name":"negative regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylic polymerase activity","type":"exact"},{"name":"negative regulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904246"}


id: PBO:0073810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 1","termid":"PBO:0073810"}


id: GO:0018667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexanone + NADPH + H+ + O2 = 6-hexanolide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexanone monooxygenase activity","secondary_identifiers":["RHEA:24068","UM-BBD_reactionID:r0166","MetaCyc:CYCLOHEXANONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cyclohexanone 1,2-monooxygenase activity","type":"exact"},{"name":"cyclohexanone oxygenase activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (6-hydroxylating, 1,2-lactonizing) activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (lactone-forming)","type":"related"}],"termid":"GO:0018667"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: GO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a cell infected with a virus.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-infected cell apoptotic process (obsolete GO:0006926)","synonyms":[{"name":"apoptosis of virus-infected cells","type":"exact"},{"name":"killing virus-infected cells","type":"exact"},{"name":"programmed cell death of virus-infected cells by apoptosis","type":"exact"},{"name":"programmed cell death, virus-infected cells","type":"exact"},{"name":"virus-infected cell apoptosis","type":"narrow"},{"name":"virus-infected cell apoptotic process","type":"exact"},{"name":"virus-infected cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0006926"}


id: GO:0033986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methanol stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methanol","termid":"GO:0033986"}


id: GO:0006785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme B, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["GOC:yaf","PMID:29414780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme B metabolic process","termid":"GO:0046492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme B biosynthetic process","synonyms":[{"name":"haem B biosynthesis","type":"exact"},{"name":"haem B biosynthetic process","type":"exact"},{"name":"heme B anabolism","type":"exact"},{"name":"heme B biosynthesis","type":"exact"},{"name":"heme B formation","type":"exact"},{"name":"heme B synthesis","type":"exact"},{"name":"protoheme biosynthesis","type":"exact"},{"name":"protoheme biosynthetic process","type":"exact"}],"termid":"GO:0006785"}


id: PR:Q96WW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32H8.05 gene.","definition_xrefs":["UniProtKB:Q96WW3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 protein C32H8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.05","synonyms":[{"name":"Spom972h-SPBC32H8.05","type":"exact"}],"termid":"PR:Q96WW3"}


id: PBO:0040526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1","termid":"PBO:0040526"}


id: PR:O59755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom972h-cut12","type":"exact"},{"name":"cell untimely torn protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59755"}


id: PBO:0043605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen beta(1-O)galactosyltransferase 2","termid":"PBO:0043605"}


id: PBO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC24 component of NDC80 kinetochore complex","termid":"PBO:0075506"}


id: PBO:0057840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155b","termid":"PBO:0057840"}


id: GO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of posterior gap gene expression mediated largely by the effects of other gap genes; in insects this is exemplified by hunchback and tailless repression of knirps.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of posterior gap gene boundaries (obsolete GO:0007361)","termid":"GO:0007361"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: GO:1900515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-xylose catabolic process","termid":"GO:0043469"},{"relation_name":"regulates","term_name":"xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xylose catabolic process to ethanol","synonyms":[{"name":"regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900515"}


id: PBO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_organization","termid":"PBO:0030727"}


id: PBO:0077846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polyglutamylase complex subunit 2","termid":"PBO:0077846"}


id: GO:0098749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cerebellar neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar neuron development","termid":"GO:0098749"}


id: PBO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Tu Tuf1","termid":"PBO:0003784"}


id: PBO:0086525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR292C is not an essential gene","termid":"PBO:0086525"}


id: PBO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 2","termid":"PBO:0050401"}


id: PBO:0079703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBOX5 antisense RNA 1","termid":"PBO:0079703"}


id: GO:0042822
data:
  {"annotated_genes":["SJAG_01383","SJAG_01881","SJAG_00283","SJAG_00252","SJAG_00691","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[95365,111680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[83153,91119,63939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridoxal phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"active vitamin B6 metabolic process","type":"exact"},{"name":"active vitamin B6 metabolism","type":"exact"},{"name":"pyridoxal phosphate metabolism","type":"exact"}],"termid":"GO:0042822","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PR:000050503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:16920624","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom-dis1/Phos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046","type":"narrow"},{"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050503"}


id: GO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of host plasma membrane integrity by formation of a pore, resulting in deregulated ion homeostasis, and cellular dysfunction that can result in cell death.","definition_xrefs":["PMID:7510043","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated pore formation in host plasma membrane","synonyms":[{"name":"pore formation in host plasma membrane","type":"exact"},{"name":"pore formation in membrane of host by symbiont","type":"broad"}],"termid":"GO:0044658"}


id: PBO:0061246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 1","termid":"PBO:0061246"}


id: FYPO:0007120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to leucine starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah","PMID:31456006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to leucine starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine deprivation","type":"exact"},{"name":"abolished leucine deprivation-induced G1 arrest","type":"exact"},{"name":"abolished mitotic G1 arrest in response to leucine starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to leucine starvation","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to leucine starvation abolished","type":"exact"}],"termid":"FYPO:0007120"}


id: PATO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamented","termid":"PATO:0002441"}


id: PBO:0039368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia chromosome region 2","termid":"PBO:0039368"}


id: GO:1900409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"positive regulation of response to oxidative stress","termid":"GO:1902884"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidative stress","synonyms":[{"name":"activation of adaptive response to oxidative stress","type":"narrow"},{"name":"activation of cellular response to oxidative stress","type":"narrow"},{"name":"positive regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of cellular response to oxidative stress","type":"exact"},{"name":"up-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up-regulation of cellular response to oxidative stress","type":"exact"},{"name":"upregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"upregulation of cellular response to oxidative stress","type":"exact"}],"termid":"GO:1900409"}


id: GO:0102301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + gamma-linolenoyl-CoA + H+ = (8Z,11Z,14Z)-3-oxoicosa-8,11,14-trienoyl-CoA + coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"gamma-linolenate elongase activity","secondary_identifiers":["MetaCyc:RXN-12777"],"termid":"GO:0102301"}


id: GO:0030485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile fiber of smooth muscle cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"smooth muscle contractile fiber","termid":"GO:0030485"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: PBO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2","termid":"PBO:0050627"}


id: PBO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex ATPase subunit Get3 (predicted)","termid":"PBO:0002153"}


id: PBO:0086703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may contain a lipid attachment site; YMR158C-A is not an essential gene","termid":"PBO:0086703"}


id: PBO:0057780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2682","termid":"PBO:0057780"}


id: GO:0061343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","PMID:16860783","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in heart morphogenesis","termid":"GO:0061343"}


id: GO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol + UDP-N-acetyl-D-glucosamine = N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine + UDP.","definition_xrefs":["MetaCyc:NACGLCTRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity","secondary_identifiers":["RHEA:31227","EC:2.4.1.227"],"termid":"GO:0051991"}


id: GO:0032261
data:
  {"annotated_genes":["SJAG_03298","SJAG_01859","SJAG_01070","SJAG_06634","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89115,112849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[89339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[89341,97535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[84474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[89343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null,"SJAG_03298":null,"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032261","terms_by_termid":{"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044209":null}}


id: GO:0035171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemocyte precursor cell acquires the specialized features of a lamellocyte. Lamellocytes are a hemocyte lineage that exists only in larvae, but are seldom observed in healthy animals. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellocyte differentiation","synonyms":[{"name":"lamellocyte cell differentiation","type":"exact"}],"termid":"GO:0035171"}


id: GO:0030618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that is phosphorylated by a TGFbeta receptor and complexes with a common-partner mediator. The- heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity (obsolete GO:0030618)","synonyms":[{"name":"TGF-beta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"pathway restricted SMAD protein","type":"related"},{"name":"pathway-restricted SMAD protein","type":"related"},{"name":"pathway-specific SMAD protein","type":"related"},{"name":"receptor regulated SMAD protein","type":"related"},{"name":"receptor-regulated SMAD protein","type":"related"}],"termid":"GO:0030618"}


id: PR:O74113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC45-related protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01953","PANTHER:PTHR10507:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 45 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.02","secondary_identifiers":["UniProtKB:O74113"],"synonyms":[{"name":"Spom972h-CDC45","type":"exact"},{"name":"suppressor of nda4 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74113"}


id: GO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mast cell degranulation","synonyms":[{"name":"regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043304"}


id: GO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases autophagosome size.","definition_xrefs":["GOC:autophagy","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagosome size","synonyms":[{"name":"activation of autophagic vacuole size","type":"narrow"},{"name":"positive regulation of autophagic vacuole size","type":"exact"},{"name":"stimulation of autophagic vacuole size","type":"narrow"},{"name":"up regulation of autophagic vacuole size","type":"exact"},{"name":"up-regulation of autophagic vacuole size","type":"exact"},{"name":"upregulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045772"}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["Wikipedia:Methylphenidate","GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: PBO:0091976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5","termid":"PBO:0091976"}


id: PBO:0039441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH inorganic pyrophosphate transport regulator","termid":"PBO:0039441"}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: GO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata formation","synonyms":[{"name":"medulla biosynthesis","type":"related"},{"name":"medulla formation","type":"related"},{"name":"myelencephalon biosynthesis","type":"related"},{"name":"myelencephalon formation","type":"related"}],"termid":"GO:0021580"}


id: PBO:0042843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 47","termid":"PBO:0042843"}


id: PBO:0065243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR15 divergent transcript","termid":"PBO:0065243"}


id: PBO:0038855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 2","termid":"PBO:0038855"}


id: GO:0035839
data:
  {"annotated_genes":["SJAG_00333","SJAG_02838","SJAG_03379","SJAG_04058","SJAG_00030","SJAG_01196","SJAG_00028","SJAG_03126","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84206,86616,100417,105278,106632,110011],"is_not":false,"summary":null,"term":"GO:0035839"},{"annotations":[96640,107846,113897],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"A cell tip at which no growth takes place. For example, in fission yeast the cell end newly formed by cell division does not grow immediately upon its formation, and lacks actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00333":null,"SJAG_01196":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03705":null,"SJAG_04058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new cell end","type":"related"},{"name":"non-growing cell end","type":"exact"}],"termid":"GO:0035839","terms_by_termid":{"GO:0035839":null,"GO:0140472":null}}


id: FYPO:0009072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0002058","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on lysine nitrogen source","synonyms":[{"name":"increased growth on lysine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on lysine nitrogen source","type":"exact"}],"termid":"FYPO:0009072"}


id: PBO:0061294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein, coactivator of histone transcription","termid":"PBO:0061294"}


id: GO:0044648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:jl","PMID:21875999"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 dimethylation (obsolete GO:0044648)","termid":"GO:0044648"}


id: PBO:0028092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_unequal_chromosome_segregation","termid":"PBO:0028092"}


id: PBO:0090627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 family protein","termid":"PBO:0090627"}


id: GO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:kd","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transport (obsolete GO:0006823)","synonyms":[{"name":"heavy metal ion transport","type":"exact"}],"termid":"GO:0006823"}


id: PBO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_normal_germ_tube_morphology","termid":"PBO:0031067"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: PBO:0016114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule regulator Mtr1","termid":"PBO:0016114"}


id: SO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon causing the substitution of a non conservative amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid_substitution","termid":"SO:0001606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_conservative_amino_acid_substitution","synonyms":[{"name":"non conservative amino acid substitution","type":"exact"}],"termid":"SO:0001608"}


id: GO:1901104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracenomycin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tetracenomycin C metabolic process","synonyms":[{"name":"tetracenomycin C metabolism","type":"exact"}],"termid":"GO:1901104"}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: PBO:0071633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL36A pseudogene 52","termid":"PBO:0071633"}


id: GO:1900495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"down regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"negative regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900495"}


id: GO:0098544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein complex location","termid":"GO:0098544"}


id: PBO:0067432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 553, pseudogene","termid":"PBO:0067432"}


id: GO:0009841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial endopeptidase Clp complex","termid":"GO:0009841"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: GO:0097413
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic, spherical inclusion commonly found in damaged neurons, and composed of abnormally phosphorylated, neurofilament proteins aggregated with ubiquitin and alpha-synuclein.","definition_xrefs":["NIF_Subcellular:sao4933778419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body","synonyms":[{"name":"cytoplasmic inclusion","type":"related"}],"termid":"GO:0097413"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: GO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis","termid":"GO:0010109"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: GO:0009088
data:
  {"annotated_genes":["SJAG_00234","SJAG_03692","SJAG_00432","SJAG_00881","SJAG_03141","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67521,96546,101797,106544,107870,111773],"is_not":false,"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine metabolic process","termid":"GO:0006566"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00881":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"threonine biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOSER-THRESYN-PWY","MetaCyc:THRESYN-PWY"],"synonyms":[{"name":"threonine anabolism","type":"exact"},{"name":"threonine biosynthesis","type":"exact"},{"name":"threonine formation","type":"exact"},{"name":"threonine synthesis","type":"exact"}],"termid":"GO:0009088","terms_by_termid":{"GO:0009088":null}}


id: GO:1901769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbapenem.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00182","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem biosynthetic process","synonyms":[{"name":"carbapenem anabolism","type":"exact"},{"name":"carbapenem biosynthesis","type":"exact"},{"name":"carbapenem formation","type":"exact"},{"name":"carbapenem synthesis","type":"exact"}],"termid":"GO:1901769"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: PBO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago-nashi homolog (predicted)","termid":"PBO:0004764"}


id: GO:0072283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}


id: PBO:0004415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk24","termid":"PBO:0004415"}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: PBO:0051084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 2 (G2m marker)","termid":"PBO:0051084"}


id: PBO:0041168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 antisense RNA 1","termid":"PBO:0041168"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: PBO:0075295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33 pseudogene 1","termid":"PBO:0075295"}


id: GO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex disassembly process that contributes to protein import into the nucleus, and that results in the dissociation of the cargo protein and the carrier (such as an importin alpha/beta heterodimer) from each other and from the nuclear pore complex.","definition_xrefs":["GOC:mah","PMID:14570049","PMID:9126736","PMID:9687515"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, substrate release (obsolete GO:0000061)","synonyms":[{"name":"protein import into cell nucleus, substrate release","type":"exact"},{"name":"protein substrate release during protein import into nucleus","type":"exact"},{"name":"protein substrate release during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein substrate release during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, substrate release","type":"exact"},{"name":"protein-nucleus import, substrate release","type":"exact"}],"termid":"GO:0000061"}


id: PBO:0029513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_stubby_vegetative_cell_population_(obsolete_FYPO:0002201)","termid":"PBO:0029513"}


id: FYPO:0005355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005355"}


id: PBO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSA antisense RNA 1","termid":"PBO:0047304"}


id: GO:1905384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to presynapse.","definition_xrefs":["PMID:24449494","GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"regulates","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to presynapse","synonyms":[{"name":"regulation of protein localisation in presynapse","type":"exact"},{"name":"regulation of protein localisation to presynapse","type":"exact"},{"name":"regulation of protein localization in presynapse","type":"exact"},{"name":"regulation of recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905384"}


id: PBO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0018171"}


id: PBO:0088607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family","termid":"PBO:0088607"}


id: GO:0006034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle chitin metabolic process","synonyms":[{"name":"cuticle chitin metabolism","type":"exact"}],"termid":"GO:0006034"}


id: PBO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain","termid":"PBO:0048079"}


id: PBO:0054959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2373","termid":"PBO:0054959"}


id: PBO:0030577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_valine_level","termid":"PBO:0030577"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: GO:1904141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell migration","synonyms":[{"name":"activation of microglial cell migration","type":"narrow"},{"name":"up regulation of microglial cell migration","type":"exact"},{"name":"up-regulation of microglial cell migration","type":"exact"},{"name":"upregulation of microglial cell migration","type":"exact"}],"termid":"GO:1904141"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: GO:0033081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation in thymus","synonyms":[{"name":"regulation of T cell development in thymus","type":"related"},{"name":"regulation of thymic T cell differentiation","type":"exact"},{"name":"regulation of thymocyte cell differentiation","type":"exact"},{"name":"regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033081"}


id: PBO:0053420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 362","termid":"PBO:0053420"}


id: FYPO:0004673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, contains more than one septum, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000004","FYPO:0000005","FYPO:0002403","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated multiseptate cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004673"}


id: PBO:0040539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GALT5 antisense RNA 1","termid":"PBO:0040539"}


id: GO:0060226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of photoreceptor cell differentiation","termid":"GO:0046533"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"}


id: PBO:0077932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 5","termid":"PBO:0077932"}


id: PBO:0070100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 14 pseudogene","termid":"PBO:0070100"}


id: GO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light or dark of a given length. The length of the period of light or dark required to initiate the change is set relative to a particular duration known as the 'critical day length'. The critical day length varies between species.","definition_xrefs":["ISBN:0697037754","GOC:jid","ISBN:0582015952","ISBN:0709408862","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"part_of","term_name":"vegetative to reproductive phase transition of meristem","termid":"GO:0010228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoperiodism, flowering","synonyms":[{"name":"photoperiodic control of flowering time","type":"exact"},{"name":"photoperiodic control of inflorescence development","type":"exact"},{"name":"response to day length, flowering","type":"exact"},{"name":"response to night length, flowering","type":"exact"},{"name":"response to photoperiod, flowering","type":"exact"}],"termid":"GO:0048573"}


id: RO:HOM0000051
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paedomorphosis that is produced by delayed growth of immature structures into the adult form.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paedomorphorsis_relationship_with","termid":"RO:HOM0000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_postdisplacement_relationship_with","synonyms":[{"name":"post-displacement","type":"exact"}],"termid":"RO:HOM0000051"}


id: GO:0006481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the C-terminal amino acid of a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein methylation","synonyms":[{"name":"C-terminal protein amino acid methylation","type":"exact"}],"termid":"GO:0006481"}


id: GO:0016419
data:
  {"annotated_genes":["SJAG_03972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96445,83555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.39"],"termid":"GO:0016419","terms_by_termid":{"GO:0004314":null}}


id: GO:0042692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a muscle cell.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell differentiation","synonyms":[{"name":"myogenesis","type":"related"}],"termid":"GO:0042692"}


id: PBO:0029582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029582"}


id: GO:0006598
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyamine breakdown","type":"exact"},{"name":"polyamine catabolism","type":"exact"},{"name":"polyamine degradation","type":"exact"}],"termid":"GO:0006598","terms_by_termid":{"GO:0009447":null}}


id: PBO:0065011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 15","termid":"PBO:0065011"}


id: GO:0006644
data:
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id: PBO:0077802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated high mobility group box","termid":"PBO:0077802"}


id: PBO:0051042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant delta","termid":"PBO:0051042"}


id: GO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).","definition_xrefs":["PMID:8626640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0003674","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity","termid":"GO:0090582"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: GO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport within lipid bilayer","termid":"GO:0032595"},{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"B cell receptor transport into membrane raft","synonyms":[{"name":"B cell receptor translocation into membrane raft","type":"exact"},{"name":"B cell receptor transport into lipid raft","type":"exact"},{"name":"BCR translocation into membrane raft","type":"exact"},{"name":"BCR transport into membrane raft","type":"exact"}],"termid":"GO:0032597"}


id: PBO:0017880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to plasma membrane transport protein Rsn1 (predicted)","termid":"PBO:0017880"}


id: PBO:0054976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2390","termid":"PBO:0054976"}


id: GO:2000616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 acetylation (obsolete GO:2000616)","synonyms":[{"name":"negative regulation of histone H3 acetylation at K9","type":"exact"},{"name":"negative regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000616"}


id: PATO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return.","definition_xrefs":["www.answers.com:www.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"passive","termid":"PATO:0000764"}


id: PBO:0085654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; human homolog MYG1 complements yeast null mutant","termid":"PBO:0085654"}


id: GO:1905753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of argininosuccinate synthase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:19491403"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of argininosuccinate synthase activity (obsolete GO:1905753)","synonyms":[{"name":"activation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"narrow"},{"name":"activation of arginine succinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinate synthase activity","type":"narrow"},{"name":"activation of argininosuccinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinic acid synthetase activity","type":"narrow"},{"name":"activation of arginosuccinate synthetase activity","type":"narrow"},{"name":"activation of citrulline--aspartate ligase activity","type":"narrow"},{"name":"positive regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of arginine succinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"positive regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up-regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up-regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"upregulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"upregulation of arginine succinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"upregulation of arginosuccinate synthetase activity","type":"exact"},{"name":"upregulation of citrulline--aspartate ligase activity","type":"exact"}],"termid":"GO:1905753"}


id: GO:2001159
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization by the Cvt pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"regulates","term_name":"cytoplasm to vacuole targeting by the Cvt pathway","termid":"GO:0032258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0006810"],"is_obsolete":false,"name":"regulation of protein localization by the Cvt pathway","synonyms":[{"name":"regulation of cytoplasm to vacuole targeting","type":"exact"},{"name":"regulation of cytoplasm-to-vacuole targeting","type":"exact"}],"termid":"GO:2001159"}


id: PBO:0078392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 2-1","termid":"PBO:0078392"}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: PBO:0069480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 747, pseudogene","termid":"PBO:0069480"}


id: GO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 4 subunits: a transmembrane substrate-binding protein (known as the S component), and an energy-coupling module that comprises two ATP-binding proteins (known as the A and A' components) and a transmembrane protein (known as the T component). Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["PMID:21135102","PMID:18931129","PMID:20972419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, transmembrane substrate-binding subunit-containing","synonyms":[{"name":"ATP-binding cassette (ABC) transporter complex, ECF-type","type":"exact"},{"name":"energy coupling factor (ECF)-type ABC transporter","type":"exact"},{"name":"energy-coupling factor transporter","type":"exact"}],"termid":"GO:0035796"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: PR:O14186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 24 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01111","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C4F8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.11","secondary_identifiers":["UniProtKB:O14186"],"synonyms":[{"name":"Spom972h-WDR24","type":"exact"}],"termid":"PR:O14186"}


id: GO:0010610
data:
  {"annotated_genes":["SJAG_03886","SJAG_05014","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85671,85264,87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation that is part of a change in state or activity of a cell as a result of an exogenous disturbance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010610","terms_by_termid":{"GO:2000815":null}}


id: PR:O42896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC115.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C115.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC115.03","synonyms":[{"name":"Spom972h-SPBC115.03","type":"exact"}],"termid":"PR:O42896"}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: PBO:0043305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmegin","termid":"PBO:0043305"}


id: RO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}


id: GO:0021992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expansion of cell numbers in the neural plate due to cell division of progenitor cells preferentially in the rostrocaudal direction, resulting in the elongation of the tissue.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in neural plate elongation","termid":"GO:0021992"}


id: PBO:0085281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane protein (PMP); required for proper localization and stability of PMPs; anchors peroxisome retention factor Inp1p at the peroxisomal membrane; interacts with Pex19p","termid":"PBO:0085281"}


id: GO:1901856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"negatively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of cellular respiration","synonyms":[{"name":"down regulation of cellular respiration","type":"exact"},{"name":"down regulation of oxidative metabolic process","type":"exact"},{"name":"down regulation of oxidative metabolism","type":"exact"},{"name":"down regulation of respiration","type":"broad"},{"name":"down-regulation of cellular respiration","type":"exact"},{"name":"down-regulation of oxidative metabolic process","type":"exact"},{"name":"down-regulation of oxidative metabolism","type":"exact"},{"name":"down-regulation of respiration","type":"broad"},{"name":"downregulation of cellular respiration","type":"exact"},{"name":"downregulation of oxidative metabolic process","type":"exact"},{"name":"downregulation of oxidative metabolism","type":"exact"},{"name":"downregulation of respiration","type":"broad"},{"name":"inhibition of cellular respiration","type":"narrow"},{"name":"inhibition of oxidative metabolic process","type":"exact"},{"name":"inhibition of oxidative metabolism","type":"exact"},{"name":"inhibition of respiration","type":"broad"},{"name":"negative regulation of oxidative metabolic process","type":"exact"},{"name":"negative regulation of oxidative metabolism","type":"exact"},{"name":"negative regulation of respiration","type":"broad"}],"termid":"GO:1901856"}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: PBO:0052010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JNK1/MAPK8-associated membrane protein pseudogene 1","termid":"PBO:0052010"}


id: PBO:0003848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex gamma subunit Cct3","termid":"PBO:0003848"}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: SO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region that includes DNAse hypersensitive sites located near a gene that confers the high-level, position-independent, and copy number-dependent expression to that gene.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locus_control_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Locus_control_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:locus_control_region","type":"exact"},{"name":"LCR","type":"exact"},{"name":"locus control element","type":"related"},{"name":"locus control region","type":"exact"}],"termid":"SO:0000037"}


id: PBO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 1","termid":"PBO:0046244"}


id: FYPO:0003090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased replication fork arrest at rDNA repeats","synonyms":[{"name":"decreased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"reduced replication fork arrest at rDNA repeats","type":"exact"}],"termid":"FYPO:0003090"}


id: PBO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 1","termid":"PBO:0048171"}


id: GO:0030998
data:
  {"annotated_genes":["SJAG_07002","SJAG_04748","SJAG_02490","SJAG_04303","SJAG_02652","SJAG_00172","SJAG_05333","SJAG_03438","SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84512,85809,86954,90339,100645,105414,105512,107001,111511],"is_not":false,"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A proteinaceous scaffold associated with fission yeast chromosomes during meiotic prophase. Linear elements consist of a protein complex, LinE, with four main structural components (Rec10, Rec25, Rec27, and Mug20 in S. pombe) associated with chromatin. The resulting structure is related to but not equivalent to the synaptonemal complex.","definition_xrefs":["PMID:30640914","DOI:10.2323/jgam.28.263","GOC:jb","PMID:12665553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptonemal structure","termid":"GO:0099086"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"linear element","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030998","terms_by_termid":{"GO:0030998":null}}


id: PBO:0043271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member B","termid":"PBO:0043271"}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: PBO:0074381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 7","termid":"PBO:0074381"}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["GOC:TermGenie","PMID:8631713","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: GO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterobactin metabolic process","termid":"GO:0009238"},{"relation_name":"is_a","term_name":"catechol-containing siderophore biosynthetic process","termid":"GO:0019540"},{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"enterobactin biosynthetic process","secondary_identifiers":["GO:0031192","MetaCyc:ENTBACSYN-PWY","GO:0031191"],"synonyms":[{"name":"enterobactin anabolism","type":"exact"},{"name":"enterobactin biosynthesis","type":"exact"},{"name":"enterobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"enterobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"enterobactin formation","type":"exact"},{"name":"enterobactin synthesis","type":"exact"},{"name":"enterobactin synthetase","type":"related"},{"name":"enterochelin biosynthesis","type":"exact"},{"name":"enterochelin biosynthetic process","type":"exact"}],"termid":"GO:0009239"}


id: PBO:0086086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase of the ER membrane; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; involved in ER quality control; functions as a heterodimer with Pmt2p but can also pair with Pmt5p; antifungal drug target; PMT2 has a paralog, PMT3, that arose from the whole genome duplication","termid":"PBO:0086086"}


id: GO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-hydroxymandelate + H+ + O2 = 4-hydroxybenzaldehyde + CO2 + H2O2.","definition_xrefs":["EC:1.1.3.19","RHEA:15833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxymandelate oxidase activity","secondary_identifiers":["KEGG_REACTION:R02673","MetaCyc:4-HYDROXYMANDELATE-OXIDASE-RXN"],"synonyms":[{"name":"(S)-2-hydroxy-2-(4-hydroxyphenyl)acetate:oxygen 1-oxidoreductase activity","type":"related"},{"name":"L-4-hydroxymandelate oxidase (decarboxylating)","type":"related"}],"termid":"GO:0047579"}


id: PBO:0075873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 pseudogene 1","termid":"PBO:0075873"}


id: PBO:0083493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YIP3/YNL044W","termid":"PBO:0083493"}


id: PBO:0065570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin reductase 1","termid":"PBO:0065570"}


id: GO:1902251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:14569084","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"negatively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte apoptotic process","synonyms":[{"name":"down regulation of RBC apoptosis","type":"narrow"},{"name":"down regulation of RBC apoptotic process","type":"exact"},{"name":"down regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down regulation of red blood cell apoptosis","type":"narrow"},{"name":"down regulation of red blood cell apoptotic process","type":"exact"},{"name":"down-regulation of RBC apoptosis","type":"narrow"},{"name":"down-regulation of RBC apoptotic process","type":"exact"},{"name":"down-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down-regulation of red blood cell apoptosis","type":"narrow"},{"name":"down-regulation of red blood cell apoptotic process","type":"exact"},{"name":"downregulation of RBC apoptosis","type":"narrow"},{"name":"downregulation of RBC apoptotic process","type":"exact"},{"name":"downregulation of erythrocyte apoptosis","type":"narrow"},{"name":"downregulation of erythrocyte apoptotic process","type":"exact"},{"name":"downregulation of red blood cell apoptosis","type":"narrow"},{"name":"downregulation of red blood cell apoptotic process","type":"exact"},{"name":"inhibition of RBC apoptosis","type":"narrow"},{"name":"inhibition of RBC apoptotic process","type":"narrow"},{"name":"inhibition of erythrocyte apoptosis","type":"narrow"},{"name":"inhibition of erythrocyte apoptotic process","type":"narrow"},{"name":"inhibition of red blood cell apoptosis","type":"narrow"},{"name":"inhibition of red blood cell apoptotic process","type":"narrow"},{"name":"negative regulation of RBC apoptosis","type":"narrow"},{"name":"negative regulation of RBC apoptotic process","type":"exact"},{"name":"negative regulation of erythrocyte apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902251"}


id: PBO:0028712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_global_homologous_chromosome_pairing","termid":"PBO:0028712"}


id: FYPO:0005301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PMID:26697368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"increased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005301"}


id: GO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U11, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U11 snRNP, most of which remain associated with the U11 snRNA both while the U11 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U11 snRNP","synonyms":[{"name":"12S U11 snRNP","type":"narrow"},{"name":"snRNP U11","type":"exact"}],"termid":"GO:0005692"}


id: GO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nylon, a polymer where the main polymer chain comprises recurring amide groups; these compounds are generally formed from combinations of diamines, diacids and amino acids.","definition_xrefs":["UniProtKB-KW:KW-0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nylon metabolic process","synonyms":[{"name":"nylon metabolism","type":"exact"}],"termid":"GO:0042198"}


id: PBO:0029265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029265"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: PBO:0046018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 divergent transcript","termid":"PBO:0046018"}


id: PBO:0084689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cruciform cutting endonuclease; cleaves Holliday junctions formed during recombination of mitochondrial DNA; CCE1 has a paralog, MRS1, that arose from the whole genome duplication","termid":"PBO:0084689"}


id: PBO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 54","termid":"PBO:0050351"}


id: GO:0015750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which pentose is transported across a lipid bilayer, from one side of a membrane to the other. A pentose is any aldose with a chain of five carbon atoms in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pentose transmembrane transport","synonyms":[{"name":"pentose transport","type":"related"}],"termid":"GO:0015750"}


id: PBO:0025424
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair-deficiency disorders","termid":"PBO:0025424"}


id: PBO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 2","termid":"PBO:0043388"}


id: PBO:0064034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 68","termid":"PBO:0064034"}


id: GO:0005771
data:
  {"annotated_genes":["SJAG_01088","SJAG_04047","SJAG_03783","SJAG_04643","SJAG_05210","SJAG_00181","SJAG_01242","SJAG_04489","SJAG_03976","SJAG_00900","SJAG_02100","SJAG_05207","SJAG_03892","SJAG_00416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83389,84062,93618,96603,98886,99492,101552,102369,109248,110417,110850,115167],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[89502,87614,115169],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["PMID:16533950","PMID:11566881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_02100":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04047":null,"SJAG_04489":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"multivesicular body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao2045955158"],"synonyms":[{"name":"MVB","type":"exact"},{"name":"MVE","type":"exact"},{"name":"multivesicular endosome","type":"exact"}],"termid":"GO:0005771","terms_by_termid":{"GO:0005771":null,"GO:0032585":null}}


id: PBO:0086366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,3-mannosyltransferase; not required for protein O-glycosylation; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086366"}


id: PATO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000343 gametophyte incompatible value (obsolete PATO:0000343)","termid":"PATO:0000343"}


id: GO:0141018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a component of the host extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21270401","PMID:23586629","PMID:15228540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host via host extracellular matrix","synonyms":[{"name":"adhesion of symbiont to host extracellular matrix via collagen","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via fibronectin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via integrin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via laminin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via vitronectin","type":"narrow"}],"termid":"GO:0141018"}


id: GO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signalling pathway involved in heart process","type":"exact"},{"name":"M2 receptor signaling pathway involved in heart process","type":"narrow"},{"name":"muscarinic receptor signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086093"}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: GO:0071481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to X-ray","termid":"GO:0010165"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to X-ray","synonyms":[{"name":"cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0071481"}


id: PBO:0055011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2426","termid":"PBO:0055011"}


id: PBO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_gamma-glutamyl-2-aminobutyrate_level","termid":"PBO:0035766"}


id: PBO:0069794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1080, pseudogene","termid":"PBO:0069794"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: GO:0048729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tissue are generated and organized.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue morphogenesis","termid":"GO:0048729"}


id: GO:1990215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vesicle-mediated transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24248335","PMID:22319451","PMID:30893609","PMID:31492901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vesicle-mediated transport","synonyms":[{"name":"negative regulation by symbiont of host intracellular transport","type":"broad"},{"name":"symbiont-mediated perturbation of host endosomal trafficking","type":"related"}],"termid":"GO:1990215"}


id: GO:1902744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["PMID:16054028","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"negatively_regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium organization","synonyms":[{"name":"down regulation of lamellipodium organization","type":"exact"},{"name":"down-regulation of lamellipodium organization","type":"exact"},{"name":"downregulation of lamellipodium organization","type":"exact"},{"name":"inhibition of lamellipodium organization","type":"narrow"}],"termid":"GO:1902744"}


id: GO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell differentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"reversible differentiation","termid":"GO:0090677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}


id: PATO:0001645
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary into the surface or boundary of another entity.","definition_xrefs":["PATOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protruding into","termid":"PATO:0001645"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: PBO:0046737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 3","termid":"PBO:0046737"}


id: PBO:0084261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein, regulates phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PI4P levels by controlling access of Sac1p phosphatase to substrate PI4P in the PM; interacts with FFAT motifs in Opi1p, Swh1p, Osh2p, and Osh3p; involved in telomeric silencing; VAP homolog; SCS2 has a paralog, SCS22, that arose from the whole genome duplication","termid":"PBO:0084261"}


id: GO:0035610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutamate residue from the side chain of a protein. Glutamate side chains are added to glutamic acid residues within the primary protein sequence during polyglutamylation.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein side chain deglutamylation","synonyms":[{"name":"removal of posttranslational polyglutamylation","type":"exact"},{"name":"shortening of glutamate side chain","type":"related"}],"termid":"GO:0035610"}


id: PBO:0052786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 25","termid":"PBO:0052786"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: GO:0051554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol metabolic process","synonyms":[{"name":"flavonol metabolism","type":"exact"}],"termid":"GO:0051554"}


id: PATO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A limited, often assigned period of activity.","definition_xrefs":["answers.com:answers.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000167 bouts (obsolete PATO:0000167)","termid":"PATO:0000167"}


id: PBO:0065555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase","termid":"PBO:0065555"}


id: PR:Q9P7L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like protein SPBC21C3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.07c","secondary_identifiers":["UniProtKB:Q9P7L6"],"synonyms":[{"name":"Spom972h-METTL8","type":"exact"}],"termid":"PR:Q9P7L6"}


id: PR:P41389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11630:SF42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.05","secondary_identifiers":["UniProtKB:P41389"],"synonyms":[{"name":"SPAC1B2.05","type":"related"},{"name":"Spom972h-MCM5","type":"exact"},{"name":"cell division control protein nda4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nda4","type":"related"}],"termid":"PR:P41389"}


id: GO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"spermidine:sinapoyl CoA N-acyltransferase activity","termid":"GO:0080072"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0079643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 16","termid":"PBO:0079643"}


id: PBO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase","termid":"PBO:0061566"}


id: MOD:01745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01745"}


