# terms

id: PBO:0011088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase (predicted)","termid":"PBO:0011088"}


id: PBO:0069589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 863, pseudogene","termid":"PBO:0069589"}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: PBO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pears And Lemons","termid":"PBO:0005853"}


id: GO:0098534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the assembly of one or more centrioles.","definition_xrefs":["GOC:dos","PMID:24075808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"centriole assembly","termid":"GO:0098534"}


id: GO:0052235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052235)","synonyms":[{"name":"negative aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052235"}


id: GO:0022886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transport of a solute across a membrane. This kind of transporter interacts much more weakly with the solute than the carrier does. It is an aqueous pore that extends across the membrane. It may change from closed to open and back. It transports faster than a carrier. It is always passive.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"channel-forming ionophore activity","synonyms":[{"name":"ionophore activity","type":"broad"}],"termid":"GO:0022886"}


id: PBO:0076861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 11","termid":"PBO:0076861"}


id: GO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sub-structure within the large single mitochondrion of kinetoplastid parasites and which is closely associated with the flagellar pocket and basal body of the flagellum.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"kinetoplast","secondary_identifiers":["Wikipedia:Kinetoplast"],"termid":"GO:0020023"}


id: GO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS).","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"protein localization to phagophore assembly site","synonyms":[{"name":"protein localisation to phagophore assembly site","type":"exact"},{"name":"protein localization to PAS","type":"exact"},{"name":"protein localization to pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0034497"}


id: GO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phospholipid dephosphorylation","termid":"GO:0046839"}


id: FYPO:0005593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inositol phosphorylceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular inositol phosphorylceramide level","synonyms":[{"name":"increased cellular IPC level","type":"exact"},{"name":"increased cellular inositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol phosphorylceramide level during vegetative growth","type":"exact"},{"name":"increased inositol phosphorylceramide accumulation","type":"related"}],"termid":"FYPO:0005593"}


id: PBO:0073289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 11","termid":"PBO:0073289"}


id: PBO:0027446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_transcription_at_stress_response_genes","termid":"PBO:0027446"}


id: PBO:0034487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteolysis_during_vegetative_growth","termid":"PBO:0034487"}


id: PBO:0039921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 19","termid":"PBO:0039921"}


id: PBO:0050507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C6","termid":"PBO:0050507"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115591,115599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115590,115594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115083],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["PomBase:mah","GO:0019538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_03940","SJAG_04697","SJAG_02592","SJAG_01787"],"single_locus_genotype_uniquenames":["nem2delta","sty1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta","gms1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: GO:0031625
data:
  {"annotated_genes":["SJAG_03575","SJAG_01226","SJAG_01134","SJAG_04573","SJAG_02591","SJAG_00452","SJAG_04335","SJAG_03643","SJAG_01540","SJAG_00803","SJAG_01686","SJAG_01365","SJAG_00615","SJAG_02253"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59125,62852,65345,67171,70120,72135,72727,74611,76947,77407,77522,77612,77999,78507],"is_not":false,"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase binding","termid":"GO:0044389"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ubiquitin protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ubiquitin ligase binding","type":"exact"}],"termid":"GO:0031625","terms_by_termid":{"GO:0031625":null}}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: PBO:0082444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A","termid":"PBO:0082444"}


id: PBO:0080480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 3-1, pseudogene","termid":"PBO:0080480"}


id: GO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in cell fate commitment (obsolete GO:0060850)","termid":"GO:0060850"}


id: GO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of angiotensin-converting enzyme, thereby preventing the synthesis of angiotensin II from its precursor, angiotensin I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete angiotensin-converting enzyme inhibitor activity (obsolete GO:0042031)","synonyms":[{"name":"ACE inhibitor","type":"exact"},{"name":"angiotensin-converting enzyme inhibitor activity","type":"exact"},{"name":"peptidyl dipeptidase A inhibitor","type":"exact"}],"termid":"GO:0042031"}


id: GO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5.8S rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:768488","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of 2S rRNA","termid":"GO:0000475"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000486"}


id: PBO:0047242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member B","termid":"PBO:0047242"}


id: PBO:0109091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 5","termid":"PBO:0109091"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110485],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["EC:4.1.1.21","RHEA:10792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04209","MetaCyc:AIRCARBOXY-RXN","Reactome:R-HSA-73806"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: PBO:0034631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_level","termid":"PBO:0034631"}


id: PBO:0053822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1085","termid":"PBO:0053822"}


id: GO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphate(out) = ADP + phosphate + phosphate(in).","definition_xrefs":["EC:7.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled phosphate ion transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-27-RXN","RHEA:24440"],"synonyms":[{"name":"ABC phosphate transporter activity","type":"narrow"},{"name":"ATP phosphohydrolase (phosphate-importing)","type":"related"},{"name":"phosphate ABC transporter","type":"narrow"},{"name":"phosphate ion transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphate porter activity","type":"exact"},{"name":"phosphate transporting ATPase activity","type":"exact"},{"name":"phosphate-transporting ATPase activity","type":"related"}],"termid":"GO:0015415"}


id: PBO:0041055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 6","termid":"PBO:0041055"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: GO:1990034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:2145281","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion export across plasma membrane","synonyms":[{"name":"calcium ion efflux from cell","type":"exact"},{"name":"calcium ion export from cell","type":"exact"}],"termid":"GO:1990034"}


id: PBO:0071950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S5","termid":"PBO:0071950"}


id: GO:0006327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete random coil binding (obsolete GO:0006327)","synonyms":[{"name":"random coil binding","type":"exact"}],"termid":"GO:0006327"}


id: PBO:0072979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 3, pseudogene","termid":"PBO:0072979"}


id: PBO:0052556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor G1","termid":"PBO:0052556"}


id: PBO:0040845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell linker","termid":"PBO:0040845"}


id: PBO:0083008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother; localizes in birth scars; expression is repressed by cAMP","termid":"PBO:0083008"}


id: GO:1903584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["PMID:24526689","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deubiquitination (obsolete GO:1903584)","synonyms":[{"name":"regulation of histone deubiquitinylation","type":"exact"},{"name":"regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903584"}


id: GO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-20 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-20 production","secondary_identifiers":["GO:0042237","GO:0072618"],"synonyms":[{"name":"IL-20 production","type":"exact"},{"name":"ZCYTO10 production","type":"exact"},{"name":"interleukin-20 biosynthetic process","type":"narrow"},{"name":"interleukin-20 secretion","type":"narrow"}],"termid":"GO:0032624"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: PR:Q9USM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coenzyme Q-binding protein COQ10 homolog A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04486","PANTHER:PTHR12901:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q-binding protein coq10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.07","secondary_identifiers":["UniProtKB:Q9USM9"],"synonyms":[{"name":"Spom972h-COQ10A","type":"exact"}],"termid":"PR:Q9USM9"}


id: GO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine) or peptidyl-3'-(phospho-5'-uridine)-L-histidine (otherwise known as pi-UMP-histidine, pros-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein uridylylation","termid":"GO:0018177"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: GO:1990882
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"The modification of rRNA structure by addition of an acetyl group to rRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"rRNA acetylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990882","terms_by_termid":{"GO:1904812":null}}


id: PBO:0091906
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human AGO2","termid":"PBO:0091906"}


id: GO:0019751
data:
  {"annotated_genes":["SJAG_04067","SJAG_01057","SJAG_01012","SJAG_04178","SJAG_00409","SJAG_04870","SJAG_04320","SJAG_01702","SJAG_02706","SJAG_03275","SJAG_00321","SJAG_04264","SJAG_03609","SJAG_01970","SJAG_00880","SJAG_01148","SJAG_02429","SJAG_03739","SJAG_03409","SJAG_02321","SJAG_00237","SJAG_03098","SJAG_04048","SJAG_04192","SJAG_00244","SJAG_02305","SJAG_04986","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[100967,84164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[102305,89563,109782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[112355,88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[65380,88622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[84059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[65738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[111021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006020"},{"annotations":[94474,114810,88951,111022,113014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[84165,111023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[102722,67864,102721,111024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043647"},{"annotations":[100816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[101789,88345,92544,93319,105581,101321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[95935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006670"},{"annotations":[85777,104370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_00321":null,"SJAG_00409":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_03409":null,"SJAG_03609":null,"SJAG_03739":null,"SJAG_04048":null,"SJAG_04067":null,"SJAG_04178":null,"SJAG_04192":null,"SJAG_04264":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol metabolic process","type":"exact"},{"name":"polyol metabolism","type":"exact"}],"termid":"GO:0019751","terms_by_termid":{"GO:0006020":null,"GO:0006021":null,"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0006670":null,"GO:0006729":null,"GO:0019563":null,"GO:0019564":null,"GO:0032958":null,"GO:0043647":null,"GO:0046512":null,"GO:0061613":null,"GO:0071543":null,"GO:0071545":null}}


id: FYPO:0003816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires histidine or lysine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for histidine or lysine","synonyms":[{"name":"growth auxotrophic for histidine or lysine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine or lysine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for lysine or histidine","type":"exact"},{"name":"histidine or lysine auxotrophy","type":"exact"}],"termid":"FYPO:0003816"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: PBO:0076697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator 1 like","termid":"PBO:0076697"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: PBO:0088441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase Alg5","termid":"PBO:0088441"}


id: PBO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 4","termid":"PBO:0052048"}


id: PR:O13990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.08c","synonyms":[{"name":"Exo-1,3-beta-glucanase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgl2","type":"exact"}],"termid":"PR:O13990"}


id: PBO:0064001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 35","termid":"PBO:0064001"}


id: PBO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N syndrome","termid":"PBO:0002047"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: PBO:0041710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 3","termid":"PBO:0041710"}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: PBO:0070697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9","termid":"PBO:0070697"}


id: PR:O74352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bridging integrator 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03271","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.12","secondary_identifiers":["UniProtKB:O74352"],"synonyms":[{"name":"Spom972h-BIN2","type":"exact"},{"name":"homolog of Bin1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74352"}


id: FYPO:0005624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"hypersensitive to UV during mitotic S phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic S phase","type":"exact"},{"name":"sensitive to UV during S phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005624"}


id: MOD:01980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glycosyl-arginine.","definition_xrefs":["PubMed:8521968","PubMed:9536051","RESID:AA0327","Unimod:41#R","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"omega-N-glycosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:01980"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109030],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: GO:0080021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["PMID:18753285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to benzoic acid","synonyms":[{"name":"response to benzoic acid stimulus","type":"exact"}],"termid":"GO:0080021"}


id: PBO:0083239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; encoded within the 35S rRNA gene on the opposite strand","termid":"PBO:0083239"}


id: PBO:0068019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 324","termid":"PBO:0068019"}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: PBO:0052397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C3","termid":"PBO:0052397"}


id: GO:0018831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-chloro-1,2,4-trihydroxybenzene = Cl- + H+ + 2-hydroxy-1,4-benzoquinone.","definition_xrefs":["UM-BBD_reactionID:r0666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-chloro-1,2,4-trihydroxybenzene dechlorinase activity","secondary_identifiers":["EC:4.5.1.-"],"termid":"GO:0018831"}


id: PBO:0054092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1445","termid":"PBO:0054092"}


id: GO:0097627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ornithine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transporter activity","termid":"GO:0000064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity L-ornithine transmembrane transporter activity","synonyms":[{"name":"high affinity L-ornithine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097627"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: GO:0043564
data:
  {"annotated_genes":["SJAG_05372","SJAG_04372"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106814,110246],"is_not":false,"summary":null,"term":"GO:0043564"}]},"cv_name":"cellular_component","definition":"Heterodimeric protein complex composed of a 70 kDa and a 80 kDa subunit, binds DNA through a channel formed by the heterodimer. Functions in DNA double stranded break repair, chromosome maintenance, transcription regulation, V(D)J recombination, and activation of DNA-PK.","definition_xrefs":["PMID:12518983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04372":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ku70:Ku80 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ku70:Ku80 heterodimer","type":"exact"}],"termid":"GO:0043564","terms_by_termid":{"GO:0043564":null}}


id: PBO:0058293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4667","termid":"PBO:0058293"}


id: GO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["PMID:16792804","GOC:tb","GOC:dph","PMID:18500339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"negatively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle pole body separation","synonyms":[{"name":"negative regulation of SPB separation","type":"exact"}],"termid":"GO:0010697"}


id: GO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.","definition_xrefs":["PMID:12912988"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase activity, uncoupled (obsolete GO:0042624)","termid":"GO:0042624"}


id: GO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-diene + NADPH + H+ + O2 = abieta-7,13-dien-18-ol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"abieta-7,13-diene hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06351","RHEA:26217","MetaCyc:RXN-8507"],"synonyms":[{"name":"abietadiene hydroxylase","type":"broad"}],"termid":"GO:0036189"}


id: GO:1900290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"positively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"activation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"upregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900290"}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:499","PubMed:11821862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: GO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through gene conversion.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"}


id: GO:0006050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine metabolic process","synonyms":[{"name":"mannosamine metabolism","type":"exact"}],"termid":"GO:0006050"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0066193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B divergent transcript","termid":"PBO:0066193"}


id: PBO:0074415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM15 antisense RNA 1","termid":"PBO:0074415"}


id: GO:1990280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin.","definition_xrefs":["PMID:22582262","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to chromatin","synonyms":[{"name":"RNA localisation to chromatin","type":"exact"}],"termid":"GO:1990280"}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: PR:O43073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps68 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0220 protein C8D2.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.02c","synonyms":[{"name":"Spom972h-vps68","type":"exact"}],"termid":"PR:O43073"}


id: PBO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 2","termid":"PBO:0047579"}


id: GO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAB small monomeric GTPase activity (obsolete GO:0003928)","synonyms":[{"name":"RAB small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003928"}


id: PBO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted)","termid":"PBO:0000120"}


id: PBO:0078229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-4","termid":"PBO:0078229"}


id: PBO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 59","termid":"PBO:0048348"}


id: GO:1900746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"regulation of VEGF signaling","type":"exact"},{"name":"regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900746"}


id: GO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide metabolic process (obsolete GO:0030799)","synonyms":[{"name":"regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030799"}


id: PBO:0064326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastin 1","termid":"PBO:0064326"}


id: GO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granulocyte colony-stimulating factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor production","synonyms":[{"name":"CSF3 production","type":"exact"},{"name":"G-CSF production","type":"exact"},{"name":"colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"filgrastim production","type":"exact"},{"name":"granulocyte colony stimulating factor production","type":"exact"},{"name":"lenograstim production","type":"exact"},{"name":"pluripoietin production","type":"exact"}],"termid":"GO:0071611"}


id: FYPO:0000672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell morphology","synonyms":[{"name":"cellular morphology: normal","type":"related"}],"termid":"FYPO:0000672"}


id: GO:1904707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell proliferation","termid":"GO:0048661"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"activation of VSMC proliferation","type":"narrow"},{"name":"activation of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"positive regulation of VSMC proliferation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up regulation of VSMC proliferation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up-regulation of VSMC proliferation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"upregulation of VSMC proliferation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904707"}


id: FYPO:0005357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal site-specific DNA replication termination at RTS1 barrier","termid":"FYPO:0005355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"decreased site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"decreased site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"},{"name":"reduced site-specific DNA replication termination at RTS1 barrier","type":"exact"}],"termid":"FYPO:0005357"}


id: GO:0160154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(38/39) in tRNA = pseudouridine(38/39) in tRNA.","definition_xrefs":["EC:5.4.99.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0016853","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA pseudouridine(38/39) synthase activity","secondary_identifiers":["RHEA:42564"],"termid":"GO:0160154"}


id: GO:0120168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hot stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of hot stimulus","termid":"GO:0062036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hot stimulus involved in thermoception","synonyms":[{"name":"sensory detection of heat stimulus during thermoception","type":"exact"},{"name":"sensory detection of hot stimulus during thermoception","type":"exact"},{"name":"sensory transduction of heat stimulus during thermoception","type":"exact"},{"name":"sensory transduction of hot stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of heat stimulus","type":"exact"},{"name":"thermoception, sensory detection of hot stimulus","type":"exact"},{"name":"thermoception, sensory transduction of heat stimulus","type":"exact"},{"name":"thermoception, sensory transduction of hot stimulus","type":"exact"}],"termid":"GO:0120168"}


id: PBO:0024820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf5 (predicted)","termid":"PBO:0024820"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: GO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxyhexanoate + NAD+ = 6-oxohexanoate + H+ + NADH.","definition_xrefs":["RHEA:14225","EC:1.1.1.258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-hydroxyhexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05283","MetaCyc:6-HYDROXYHEXANOATE-OXIDATION-RXN","UM-BBD_reactionID:r0174"],"synonyms":[{"name":"6-hydroxyhexanoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018463"}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: PBO:0059706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 14","termid":"PBO:0059706"}


id: FYPO:0003030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content and polypyrimidine tracts located approximately 17-19 nt distal to the branch site.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased splicing of mRNA introns with low A/U content","termid":"FYPO:0003242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"}],"termid":"FYPO:0003030"}


id: PBO:0083681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication","termid":"PBO:0083681"}


id: PBO:0084043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI lipid remodelase; responsible for introducing ceramides into GPI anchors having a C26:0 fatty acid in sn-2 of the glycerol moiety; can also use lyso-GPI protein anchors and various base resistant lipids as substrates; contains 14-16 transmembrane segments and several putative glycosylation and phosphorylation sites; null mutation is synthetically lethal with pkc1 deletion","termid":"PBO:0084043"}


id: PBO:0031782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cytokinesis","termid":"PBO:0031782"}


id: PBO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DC-STAMP domain containing 1","termid":"PBO:0044643"}


id: FYPO:0000471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mating type switching is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mating type switching","synonyms":[{"name":"increased mating type switching during mitotic cell cycle","type":"related"},{"name":"increased mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: increased","type":"related"}],"termid":"FYPO:0000471"}


id: PBO:0048286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase like 6","termid":"PBO:0048286"}


id: GO:0009377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-dependent hydrolysis of peptide bonds in substrates including E. coli SulA and misfolded proteins.","definition_xrefs":["PMID:10368141","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete HslUV protease activity (obsolete GO:0009377)","synonyms":[{"name":"HslUV protease activity","type":"exact"}],"termid":"GO:0009377"}


id: PR:O94664
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug166 gene.","definition_xrefs":["UniProtKB:O94664","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 166 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.06","synonyms":[{"name":"Spom972h-mug166","type":"exact"}],"termid":"PR:O94664"}


id: FYPO:0002348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly does not occur.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished stress granule assembly during vegetative growth","synonyms":[{"name":"abolished cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abolished stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abolished stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002348"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["EC:4.6.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["RHEA:13729"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: PBO:0066292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member T, pseudogene","termid":"PBO:0066292"}


id: PBO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 2","termid":"PBO:0044136"}


id: PBO:0074236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 3","termid":"PBO:0074236"}


id: PBO:0087452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf18p; shares some subunits with Replication Factor C; required for sister chromatid cohesion","termid":"PBO:0087452"}


id: GO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways performed by an organism resulting in the proteolytic processing of an inactive enzyme to an active form in another organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zymogen activation","termid":"GO:0031638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"zymogen activation in another organism","synonyms":[{"name":"zymogen activation in other organism","type":"exact"}],"termid":"GO:0044541"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115122,115258,115123,115259,115260,115261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:1901871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"ecgonone methyl ester catabolic process","synonyms":[{"name":"ecgonone methyl ester breakdown","type":"exact"},{"name":"ecgonone methyl ester catabolism","type":"exact"},{"name":"ecgonone methyl ester degradation","type":"exact"}],"termid":"GO:1901871"}


id: GO:0019073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The packing of viral DNA into a capsid.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome packaging","termid":"GO:0019072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging","termid":"GO:0019073"}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: PBO:0087601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; null mutant is sensitive to drug inducing secretion of vacuolar cargo; GFP-fusion protein localizes to the endosome","termid":"PBO:0087601"}


id: PBO:0027109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level_during_cellular_response_to_heat","termid":"PBO:0027109"}


id: PBO:0072759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 9","termid":"PBO:0072759"}


id: GO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein oxidation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"negatively_regulates","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein oxidation","synonyms":[{"name":"inhibition of lipoprotein oxidation","type":"narrow"}],"termid":"GO:0034443"}


id: PBO:0073069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein 2","termid":"PBO:0073069"}


id: GO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of the pigment anthocyanin in a particular location in a tissue, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation in tissues in response to UV light","termid":"GO:0043479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}


id: GO:0070456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactose-1-phosphate + H2O = galactose + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}


id: GO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign DNA.","definition_xrefs":["GO:jl","PMID:20062055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular DNA","secondary_identifiers":["GO:0044356"],"synonyms":[{"name":"clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine","type":"narrow"}],"termid":"GO:0044355"}


id: GO:0047933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate + alpha-D-glucose 1-phosphate = 3-phospho-D-glycerate + alpha-D-glucose 1,6-bisphosphate + H+.","definition_xrefs":["EC:2.7.1.106","RHEA:16769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucose-1,6-bisphosphate synthase activity","secondary_identifiers":["Reactome:R-HSA-8955760","KEGG_REACTION:R01660","MetaCyc:GLUCOSE-16-BISPHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"3-phospho-D-glyceroyl-phosphate:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"3-phospho-D-glyceroyl-phosphate:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose 1,6-diphosphate synthase activity","type":"related"},{"name":"glucose-1,6-bisphosphate synthetase activity","type":"related"}],"termid":"GO:0047933"}


id: PBO:0051772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1","termid":"PBO:0051772"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23575248","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: PR:Q09888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug160 gene.","definition_xrefs":["UniProtKB:Q09888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 160 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.14","synonyms":[{"name":"Spom972h-mug160","type":"exact"}],"termid":"PR:Q09888"}


id: PBO:0088176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of an ESCRT-III like complex; null mutant has growth defect at 37 C in an apq12 deletion background; non-essential gene","termid":"PBO:0088176"}


id: PBO:0057139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-2","termid":"PBO:0057139"}


id: PomGeneEx:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that indicates that the fraction of ribosomes that are translating each codon of an mRNA is higher under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PMID:33313903","PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"ribosomal density","termid":"PomGeneEx:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density increased","synonyms":[{"name":"increased ribosomal density","type":"exact"},{"name":"ribosome density increased","type":"exact"},{"name":"ribosome occupancy increased","type":"exact"}],"termid":"PomGeneEx:0000026"}


id: MOD:01524
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 116 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01524"}


id: GO:0140566
data:
  {"annotated_genes":["SJAG_03916","SJAG_01601","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86759,94819,106369],"is_not":false,"summary":null,"term":"GO:0140566"}]},"cv_name":"molecular_function","definition":"A chromatin adaptor that recognizes specific forms of histones, either modified by a post-translational modification, or the unmodified form. Histone readers have roles in many processes, including in centromere function or in modulating the accessibility of cis-regulatory regions to the transcription machinery.","definition_xrefs":["PMID:25688442","PMID:32260176","PMID:11498575","PMID:34726351","PMID:31082667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01601":null,"SJAG_03916":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"histone reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"epigenetic reader","type":"broad"},{"name":"histone reader","type":"exact"}],"termid":"GO:0140566","terms_by_termid":{"GO:0140566":null}}


id: GO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of norepinephrine uptake","synonyms":[{"name":"regulation of levarterenol uptake","type":"exact"},{"name":"regulation of noradrenaline uptake","type":"exact"},{"name":"regulation of norepinephrine import","type":"exact"}],"termid":"GO:0051621"}


id: GO:0140656
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112822],"is_not":false,"summary":null,"term":"GO:0140656"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an endodeoxyribonuclease.","definition_xrefs":["PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"endodeoxyribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140656","terms_by_termid":{"GO:0140656":null}}


id: GO:2001008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"positively_regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellulose biosynthetic process","synonyms":[{"name":"positive regulation of cellulose anabolism","type":"exact"},{"name":"positive regulation of cellulose biosynthesis","type":"exact"},{"name":"positive regulation of cellulose formation","type":"exact"},{"name":"positive regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001008"}


id: GO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta3 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alphav-beta3 complex","synonyms":[{"name":"ITGAV-ITGB3 complex","type":"narrow"},{"name":"alphav-beta3 integrin complex","type":"exact"}],"termid":"GO:0034683"}


id: GO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a heavy metal, a metal that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal binding (obsolete GO:0005505)","synonyms":[{"name":"heavy metal binding","type":"exact"}],"termid":"GO:0005505"}


id: PBO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 46","termid":"PBO:0062119"}


id: PBO:0065199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 divergent transcript","termid":"PBO:0065199"}


id: GO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-GlcUA to asioloorosomucoid.","definition_xrefs":["PMID:12511570","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"asioloorosomucoid beta-1,3-glucuronosyltransferase activity","termid":"GO:0046988"}


id: PBO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin alpha","termid":"PBO:0045520"}


id: FYPO:0003148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003148"}


id: GO:0023050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The steps whereby the downstream processes started by a signal are brought to a conclusion. Examples include destruction of cAMP by PDE, or endocytosis resulting from receptor phosphorylation. The termination process ends when the receptor has returned to its inactive state.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete consequence of signal transmission (obsolete GO:0023050)","synonyms":[{"name":"consequence of signal transmission","type":"exact"},{"name":"signal termination","type":"exact"}],"termid":"GO:0023050"}


id: GO:0070274
data:
  {"annotated_genes":["SJAG_00094"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110960],"is_not":false,"summary":null,"term":"GO:0070274"}]},"cv_name":"cellular_component","definition":"A protein complex that is required for efficient splicing, and prevents leakage of unspliced pre-mRNAs from the nucleus (named for pre-mRNA REtention and Splicing). In Saccharomyces, the complex consists of Ist3p, Bud13p, and Pml1p.","definition_xrefs":["PMID:18809678","PMID:15565172","PMID:19010333","PMID:19033360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RES complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-mRNA retention and splicing complex","type":"exact"}],"termid":"GO:0070274","terms_by_termid":{"GO:0070274":null}}


id: GO:2000967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"negatively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"negative regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000967"}


id: PBO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1","termid":"PBO:0033814"}


id: PBO:0082129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin- and formin-interacting protein; nucleation-promoting factor (NPF) for Bni1p and Bnr1p during actin cable assembly and organization; enhances Bnr1p-mediated actin nucleation, alleviating Hof1p inhibition through competitive binding; interacts with Bni1p via a C-terminal triple helical coiled-coil domain; role in polarized cell growth; isolated as a bipolar budding mutant; localizes to the presumptive bud site, small bud tips, the bud neck and secretory vesicles; potential Cdc28p substrate","termid":"PBO:0082129"}


id: RO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"differs_in","termid":"RO:0002424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differs_in_attribute_of","termid":"RO:0002425"}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: FYPO:0004713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid biosynthesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Amino acid biosynthesis RNAs are transcribed from genes whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PMID:18203864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of amino acid biosynthesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased amino acid biosynthesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of amino acid biosynthesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of amino acid biosynthesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of amino acid biosynthesis gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of amino acid biosynthesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004713"}


id: GO:0097206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which hemolymph is filtered based on size and charge through a nephrocyte filtration barrier formed by the basement membrane and nephrocyte diaphragm.","definition_xrefs":["PMID:18971929","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration","termid":"GO:0097205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrocyte filtration","termid":"GO:0097206"}


id: FYPO:0004978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a new growing cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to new cell tip","termid":"FYPO:0004977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to new growing cell tip","synonyms":[{"name":"increased protein localisation to new growing cell tip","type":"exact"},{"name":"increased protein localization to new growing cell end","type":"exact"},{"name":"increased protein localization to new growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to new growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004978"}


id: PBO:0080358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 13 pseudogene","termid":"PBO:0080358"}


id: PBO:0075671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 2","termid":"PBO:0075671"}


id: FYPO:0006543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during metaphase of mitosis is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during mitosis","termid":"FYPO:0004157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during mitotic metaphase","synonyms":[{"name":"increased protein accumulation during mitotic metaphase","type":"related"},{"name":"increased protein level during metaphase during vegetative growth","type":"exact"},{"name":"increased protein level during metaphase of mitosis","type":"exact"}],"termid":"FYPO:0006543"}


id: PBO:0078503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1 pseudogene 1","termid":"PBO:0078503"}


id: FYPO:0001225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"monoseptate","synonyms":[{"name":"monoseptate during mitotic cell cycle","type":"related"},{"name":"monoseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0001225"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PBO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 8","termid":"PBO:0048823"}


id: MOD:01405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-proline residue to form L-proline thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:8557573","RESID:AA0482","PubMed:7592021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(2S)-pyrrolidin-2-yl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Pro-Cys)","type":"exact"},{"name":"L-proline thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01405"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: PBO:0017763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted)","termid":"PBO:0017763"}


id: FYPO:0004755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the minus ends of microtubules is abnormal.","definition_xrefs":["PMID:25987607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to microtubule minus-end","synonyms":[{"name":"abnormal protein localisation to microtubule minus-end","type":"exact"},{"name":"abnormal protein localization to microtubule minus end","type":"exact"},{"name":"abnormal protein localization to microtubule minus-end during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule minus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004755"}


id: PR:O13945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk9 gene.","definition_xrefs":["UniProtKB:O13945","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.02","synonyms":[{"name":"Spom972h-ppk9","type":"exact"}],"termid":"PR:O13945"}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: PBO:0073687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIVA1 apoptosis inducing factor","termid":"PBO:0073687"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: PBO:0067780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 80","termid":"PBO:0067780"}


id: PBO:0067874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 176","termid":"PBO:0067874"}


id: PBO:0027936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_glycerol_carbon_source","termid":"PBO:0027936"}


id: PBO:0034791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, RNA-binding protein Rns1","termid":"PBO:0034791"}


id: PBO:0055174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2598","termid":"PBO:0055174"}


id: PBO:0091116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain helicase (human XRCC6 ortholog) Pku70","termid":"PBO:0091116"}


id: FYPO:0005037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PMID:22144909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen deprivation","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during nitrogen depletion","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005037"}


id: GO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-pimara-9(11),15-diene + diphosphate.","definition_xrefs":["RHEA:25544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ent-pimara-9(11),15-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-9299","EC:4.2.3.31"],"synonyms":[{"name":"PMD synthase activity","type":"broad"},{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-pimara-9(11),15-diene-forming] activity","type":"exact"}],"termid":"GO:0052674"}


id: PBO:0082308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor","termid":"PBO:0082308"}


id: PBO:0060473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 3","termid":"PBO:0060473"}


id: PR:Q9UTM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec1 gene.","definition_xrefs":["UniProtKB:Q9UTM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.02","synonyms":[{"name":"Spom972h-iec1","type":"exact"}],"termid":"PR:Q9UTM0"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04890","SJAG_02386","SJAG_04680","SJAG_02637","SJAG_04848","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96683,108051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[99906,91845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111696,114978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["PMID:24904644","GOC:jl","PMID:9851972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: PBO:0051264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-82 (pseudogene)","termid":"PBO:0051264"}


id: PATO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's density, firmness, or viscosity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consistency","synonyms":[{"name":"firmness","type":"related"}],"termid":"PATO:0000037"}


id: PBO:0047629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"firre intergenic repeating RNA element","termid":"PBO:0047629"}


id: PBO:0073828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 2","termid":"PBO:0073828"}


id: MOD:01144
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(sn-1-2,3-dipalmitoyl-glycerol)cysteine.","definition_xrefs":["DeltaMass:0","PubMed:10896212","PubMed:4575979","RESID:AA0107#var","PubMed:9056182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(sn-1-2,3-dipalmitoylglycerol)-L-cysteine","synonyms":[{"name":"S-(sn-1-Dipalmitoyl-glyceryl)- (on Cysteine)","type":"exact"}],"termid":"MOD:01144"}


id: PR:Q9P7B7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr1 gene.","definition_xrefs":["UniProtKB:Q9P7B7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C140.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.04","synonyms":[{"name":"Spom972h-ctr1","type":"exact"}],"termid":"PR:Q9P7B7"}


id: GO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of taurine biosynthesis.","definition_xrefs":["GOC:BHF","PMID:24911144","PMID:18648510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of taurine biosynthetic process","termid":"GO:0062089"}


id: PBO:0073201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3B","termid":"PBO:0073201"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: SO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_ribosyladenosine_phosphate is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_ribosyladenosine_phosphate","secondary_identifiers":["RNAMOD:016"],"synonyms":[{"name":"2'-O-ribosyladenosine (phosphate)","type":"exact"},{"name":"Ar(p)","type":"exact"},{"name":"two prime O ribosyladenosine phosphate","type":"exact"}],"termid":"SO:0001310"}


id: GO:1904411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secretory granule organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15039777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of secretory granule organization","termid":"GO:1904409"},{"relation_name":"positively_regulates","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretory granule organization","synonyms":[{"name":"activation of secretory granule organisation","type":"narrow"},{"name":"activation of secretory granule organization","type":"narrow"},{"name":"activation of secretory granule organization and biogenesis","type":"related"},{"name":"positive regulation of secretory granule organisation","type":"exact"},{"name":"positive regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up regulation of secretory granule organisation","type":"exact"},{"name":"up regulation of secretory granule organization","type":"exact"},{"name":"up regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up-regulation of secretory granule organisation","type":"exact"},{"name":"up-regulation of secretory granule organization","type":"exact"},{"name":"up-regulation of secretory granule organization and biogenesis","type":"related"},{"name":"upregulation of secretory granule organisation","type":"exact"},{"name":"upregulation of secretory granule organization","type":"exact"},{"name":"upregulation of secretory granule organization and biogenesis","type":"related"}],"termid":"GO:1904411"}


id: PBO:0054136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: PBO:0026870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus","termid":"PBO:0026870"}


id: PBO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-nitroquinoline_N-oxide","termid":"PBO:0030705"}


id: FYPO:0007401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic anaphase","synonyms":[{"name":"abnormal protein localisation to kinetochore during mitotic anaphase","type":"exact"},{"name":"abnormal protein localization to kinetochore during anaphase of mitosis","type":"exact"}],"termid":"FYPO:0007401"}


id: GO:0035987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.","definition_xrefs":["CL:0000223","GOC:yaf","PMID:17624332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"endoderm formation","termid":"GO:0001706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell differentiation","synonyms":[{"name":"endoderm cell differentiation","type":"exact"}],"termid":"GO:0035987"}


id: GO:0061626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pharyngeal arch artery is generated and organized. The pharyngeal arch arteries are a series of six paired embryological vascular structures, the development of which give rise to several major arteries, such as the stapedial artery, the middle meningeal artery, the internal carotid artery and the pulmonary artery.","definition_xrefs":["PMID:20122914","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"pharyngeal system development","termid":"GO:0060037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharyngeal arch artery morphogenesis","synonyms":[{"name":"aortic arch artery morphogenesis","type":"broad"}],"termid":"GO:0061626"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: GO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactosyl-glucosyl3-heptosyl3-KDO2-lipid A-bisphosphate + ADP-L-glycero-beta-D-manno-heptose = lipid A-core + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"lipid A-core heptosyltransferase activity","secondary_identifiers":["RHEA:30019"],"termid":"GO:0071968"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: PBO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 2","termid":"PBO:0044561"}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: PBO:0087595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; similar to S. pombe Tti1p; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087595"}


id: PBO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_condensation_during_telophase","termid":"PBO:0034640"}


id: MOD:01910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one fluorine atom.","definition_xrefs":["Unimod:127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated residue","synonyms":[{"name":"F1Res","type":"exact"}],"termid":"MOD:01910"}


id: FYPO:0003533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the bipolar index is higher than normal. The bipolar index is the proportion of the population undergoing bipolar growth at any given time.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:20501954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased bipolar index","synonyms":[{"name":"increased frequency of bipolar growth polarity","type":"related"},{"name":"increased number of cells undergoing bipolar growth","type":"exact"}],"termid":"FYPO:0003533"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000121","FYPO:0001985","FYPO:0002946","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: PBO:0073316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase like (pseudogene)","termid":"PBO:0073316"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["EC:2.3.1.113","RHEA:17557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00989","MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: PBO:0053022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LanC like glutathione S-transferase 2","termid":"PBO:0053022"}


id: FYPO:0007026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional modification of a guanosine residue in a tRNA molecule to form wybutosine occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased tRNA wybutosine biosynthesis","synonyms":[{"name":"decreased tRNA wybutosine biosynthesis during mitotic cell cycle","type":"related"},{"name":"decreased tRNA wybutosine biosynthesis during vegetative growth","type":"exact"},{"name":"decreased tRNA wybutosine biosynthetic process","type":"exact"},{"name":"decreased tRNA wybutosine formation","type":"exact"},{"name":"decreased tRNA yW formation","type":"exact"},{"name":"decreased wybutosine level in tRNA","type":"related"},{"name":"reduced tRNA wybutosine biosynthesis","type":"exact"}],"termid":"FYPO:0007026"}


id: PBO:0071521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 24","termid":"PBO:0071521"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01818","PANTHER:PTHR10741:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: PBO:0030171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030171"}


id: PBO:0031817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_autophagy","termid":"PBO:0031817"}


id: PBO:0026747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026747"}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: PBO:0005271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Oca2","termid":"PBO:0005271"}


id: GO:0036197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["MetaCyc:PWY-6074","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"zymosterol metabolic process","termid":"GO:0036196"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"zymosterol biosynthetic process","synonyms":[{"name":"zymosterol anabolism","type":"exact"},{"name":"zymosterol biosynthesis","type":"exact"},{"name":"zymosterol formation","type":"exact"},{"name":"zymosterol synthesis","type":"exact"}],"termid":"GO:0036197"}


id: PBO:0076309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 1","termid":"PBO:0076309"}


id: GO:0018936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic nitrilotriacetate metabolic process","synonyms":[{"name":"anaerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018936"}


id: GO:1901850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["PMID:14593448","GOC:yaf","UniPathway:UPA00072","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolism","type":"exact"},{"name":"coenzyme F0 metabolism","type":"exact"}],"termid":"GO:1901850"}


id: GO:0000460
data:
  {"annotated_genes":["SJAG_00854","SJAG_01191","SJAG_01581","SJAG_03789","SJAG_00689","SJAG_03952","SJAG_03796","SJAG_03012","SJAG_04321","SJAG_16455","SJAG_04153","SJAG_00722","SJAG_01811","SJAG_04330","SJAG_00897","SJAG_00081","SJAG_02830","SJAG_03425","SJAG_04524","SJAG_04006","SJAG_04289","SJAG_03179","SJAG_00955","SJAG_00965","SJAG_02275","SJAG_04492","SJAG_04369","SJAG_02759","SJAG_04818","SJAG_06613","SJAG_04084","SJAG_01551","SJAG_02374","SJAG_02553","SJAG_00882","SJAG_04174","SJAG_02644","SJAG_00772","SJAG_01521","SJAG_01818","SJAG_01431","SJAG_02993","SJAG_02547","SJAG_04824","SJAG_02250","SJAG_02382","SJAG_01623","SJAG_04916","SJAG_03745","SJAG_03234","SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86273,88371,88458,95291,96751,112163,114887],"is_not":false,"summary":null,"term":"GO:0000460"},{"annotations":[90561,87181,114556,99885],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[95501,101345,101447,95167,88985,92131,100545,103789,101448,109438,111369,90302,100323,98868,104853,111285,114588,103450,92430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[114287,100169,92892,88630,97802,102267,111876,104337,91535,111417,85447,101032,87745,94624,103273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[103274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"},{"annotations":[101806,96101,93640,85089,106684,110819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000466"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01811":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02382":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03012":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04330":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maturation of 5.8S rRNA","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000460","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000460":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0002891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"positively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin mediated immune response","synonyms":[{"name":"activation of immunoglobulin mediated immune response","type":"narrow"},{"name":"stimulation of immunoglobulin mediated immune response","type":"narrow"},{"name":"up regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"up-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"upregulation of immunoglobulin mediated immune response","type":"exact"}],"termid":"GO:0002891"}


id: GO:0060628
data:
  {"annotated_genes":["SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107539],"is_not":false,"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of ER to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060628","terms_by_termid":{"GO:0060628":null}}


id: PBO:0041200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog","termid":"PBO:0041200"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: GO:2000544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"}


id: PBO:0084784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase); required for cardiolipin biosynthesis; viability of null mutant is strain-dependent; mRNA is targeted to the bud; mutant displays defect in mitochondrial protein import, likely due to altered membrane lipid composition","termid":"PBO:0084784"}


id: GO:1902994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12042316","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid efflux","synonyms":[{"name":"regulation of phospholipid export","type":"exact"}],"termid":"GO:1902994"}


id: GO:0031163
data:
  {"annotated_genes":["SJAG_02497","SJAG_00066","SJAG_04016","SJAG_02994","SJAG_00894","SJAG_00040","SJAG_00972","SJAG_04014","SJAG_00532","SJAG_02457","SJAG_03862","SJAG_03532","SJAG_02895","SJAG_02866","SJAG_01238","SJAG_03222","SJAG_04397","SJAG_02306","SJAG_01063","SJAG_01417","SJAG_01615","SJAG_02495","SJAG_00186","SJAG_00455","SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105741,84366,97328,88514,93933,88753,94928,98851,105548,102694,109846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[88341,83661,105727,97329,110709,100043,94618,105101,113853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"},{"annotations":[100537,84735,83070,95720,84421,88516,110737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016226"}]},"cv_name":"biological_process","definition":"The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah","GOC:jl","GOC:pde","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"metallo-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metal-sulfur cluster assembly","type":"exact"},{"name":"metallo-sulfur cluster biosynthesis","type":"related"},{"name":"metallo-sulphur cluster assembly","type":"exact"}],"termid":"GO:0031163","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: PBO:0052512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL25 pseudogene 1","termid":"PBO:0052512"}


id: GO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trigeminal nerve development","termid":"GO:0021559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve morphogenesis","synonyms":[{"name":"CN V morphogenesis","type":"related"}],"termid":"GO:0021636"}


id: PBO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 4","termid":"PBO:0048477"}


id: PBO:0073662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 2","termid":"PBO:0073662"}


id: PBO:0076383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 1","termid":"PBO:0076383"}


id: MOD:00928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:513","PubMed:16771548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[3-(2,5)-dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","synonyms":[{"name":"C8-QAT","type":"related"},{"name":"[3-(2,5)-Dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","type":"related"}],"termid":"MOD:00928"}


id: PBO:0058329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4703","termid":"PBO:0058329"}


id: PBO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 13","termid":"PBO:0071354"}


id: PBO:0074618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 18","termid":"PBO:0074618"}


id: PBO:0108947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 4","termid":"PBO:0108947"}


id: PBO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_S_phase_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033811"}


id: PATO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color that falls about midway between red and blue in hue.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purple","termid":"PATO:0000951"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: GO:1900291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of galactotriose transport","termid":"GO:1900291"}


id: PBO:0077823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3B","termid":"PBO:0077823"}


id: PBO:0066855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 155","termid":"PBO:0066855"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_01874","SJAG_01160","SJAG_00436","SJAG_01615","SJAG_01670","SJAG_04055","SJAG_01052","SJAG_03094","SJAG_00403","SJAG_03955","SJAG_00750","SJAG_03237","SJAG_03784","SJAG_00790","SJAG_01186","SJAG_01914","SJAG_03135","SJAG_04518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63219,69805,70433,70603,71317,71856,72041,74879,78289],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[78201,66162,70748,66722,58531,76412,78016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[75412,75242,76415,78019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


id: GO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the biosynthesis of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"retinoic acid biosynthetic process","synonyms":[{"name":"retinoic acid anabolic process","type":"exact"},{"name":"retinoic acid biosynthesis","type":"exact"}],"termid":"GO:0002138"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: PBO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutaseaminotransferase (predicted)","termid":"PBO:0005598"}


id: PBO:0067434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 555, pseudogene","termid":"PBO:0067434"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: FYPO:0002420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce cell that has an abnormal shape and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002420"}


id: FYPO:0003278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, morphology, or physical characteristics of all or part of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal plasma membrane during vegetative growth","synonyms":[{"name":"abnormal plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003278"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: PBO:0066144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 4, chromatin remodeling factor","termid":"PBO:0066144"}


id: PBO:0063227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 X-linked","termid":"PBO:0063227"}


id: PBO:0050500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B13","termid":"PBO:0050500"}


id: SO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carbamoylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carbamoylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:076"],"synonyms":[{"name":"5-carbamoylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five carbamoylmethyl two prime O methyluridine","type":"exact"},{"name":"ncm5Um","type":"exact"}],"termid":"SO:0001368"}


id: PBO:0045168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 2","termid":"PBO:0045168"}


id: PR:O74437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1682.06 gene.","definition_xrefs":["UniProtKB:O74437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1682.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.06","synonyms":[{"name":"Spom972h-SPCC1682.06","type":"exact"}],"termid":"PR:O74437"}


id: PBO:0077237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC2 antisense RNA 1","termid":"PBO:0077237"}


id: PBO:0065412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 1","termid":"PBO:0065412"}


id: PR:Q8TFH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21227:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.07c","secondary_identifiers":["UniProtKB:Q8TFH7"],"synonyms":[{"name":"SPAPB17E12.07c","type":"related"},{"name":"Spom972h-TSEN2","type":"exact"},{"name":"tRNA-intron endonuclease sen2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH7"}


id: GO:0036022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb joint are generated and organized. A limb joint is a flexible region that separates the rigid sections of a limb to allow movement in a controlled manner.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb joint morphogenesis","synonyms":[{"name":"knee morphogenesis","type":"narrow"},{"name":"leg joint morphogenesis","type":"narrow"}],"termid":"GO:0036022"}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: PBO:0070597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 64","termid":"PBO:0070597"}


id: PBO:0072833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 3","termid":"PBO:0072833"}


id: FYPO:0005129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during heat shock measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PMID:17927811","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of heat shock gene mRNA during vegetative growth","synonyms":[{"name":"increased heat shock gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cellular response to heat shock gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of heat shock gene RNA during vegetative growth","type":"exact"},{"name":"increased level of heat shock gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of heat shock gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005129"}


id: PBO:0090608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase Xks1","termid":"PBO:0090608"}


id: GO:0038075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in innate immune response (obsolete GO:0038075)","synonyms":[{"name":"MAPK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038075"}


id: GO:0047299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tryptophan = 3-(indol-3-yl)pyruvate + L-phenylalanine.","definition_xrefs":["EC:2.6.1.28","RHEA:13741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"tryptophan-phenylpyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.28-RXN","KEGG_REACTION:R01376"],"synonyms":[{"name":"L-tryptophan-alpha-ketoisocaproate aminotransferase activity","type":"related"},{"name":"L-tryptophan:phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan--phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047299"}


id: GO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a microglial cell population by cell division.","definition_xrefs":["GOC:dph","PMID:17344397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"},{"relation_name":"is_a","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell proliferation","termid":"GO:0061518"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PBO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX10 antisense RNA 1","termid":"PBO:0075240"}


id: PBO:0084846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of prokaryotic L29 ribosomal protein; located at the ribosomal tunnel exit","termid":"PBO:0084846"}


id: PR:P78774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.06","secondary_identifiers":["UniProtKB:P78774"],"synonyms":[{"name":"Spom972h-ARPC1A","type":"exact"},{"name":"arp2/3 complex 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p41-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78774"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_04140","SJAG_00335","SJAG_00178","SJAG_04601","SJAG_04855","SJAG_03745","SJAG_00302","SJAG_01837","SJAG_04187","SJAG_01805","SJAG_00471","SJAG_04645","SJAG_00082","SJAG_01408","SJAG_03543","SJAG_04768","SJAG_03048","SJAG_04055","SJAG_03161","SJAG_01374","SJAG_01186","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[82915,85458,100069,111462,99976,97997,101542,107070,86435,98080,101158,111463,107945,94721,84185,108511,84453,108509,87741,110866,84184,108510,112671,89377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["PMID:11121744","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inclusion_bodies","NIF_Subcellular:sao120573470"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: GO:0031366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the side chain of an N-terminal asparagine residue of a protein.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from side chain","termid":"GO:0031364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-asparagine deamination","termid":"GO:0031366"}


id: PBO:0086393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the TOR regulatory pathway; negative regulator of early meiotic gene expression; required, with Pmd1p, for growth under alkaline conditions; has an N-terminal kelch-like domain; MDS3 has a paralog, PMD1, that arose from the whole genome duplication","termid":"PBO:0086393"}


id: PATO:0015002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process efficacy","termid":"PATO:0015002"}


id: PBO:0077816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 13","termid":"PBO:0077816"}


id: PBO:0031299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_elongation","termid":"PBO:0031299"}


id: PBO:0066476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 3","termid":"PBO:0066476"}


id: GO:0033891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to give 5'-phosphooligonucleotide end-products, with a preference for cleavage within the sequence CC.","definition_xrefs":["EC:3.1.21.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"CC-preferring endodeoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.6-RXN"],"synonyms":[{"name":"5'-CC-3'-preferring endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic dodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endonuclease activity","type":"related"}],"termid":"GO:0033891"}


id: PBO:0057573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 769","termid":"PBO:0057573"}


id: PBO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4 (predicted)","termid":"PBO:0003881"}


id: PBO:0045702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 1B","termid":"PBO:0045702"}


id: GO:0035387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Roundabout signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Roundabout signaling pathway","termid":"GO:0035386"},{"relation_name":"negatively_regulates","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Roundabout signaling pathway","synonyms":[{"name":"negative regulation of Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035387"}


id: PBO:0060412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 40, NatD catalytic subunit","termid":"PBO:0060412"}


id: PBO:0111751
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0111751"}


id: GO:1904576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tunicamycin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23106379","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to tunicamycin (obsolete GO:1904576)","termid":"GO:1904576"}


id: GO:1905200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gibberellic acid across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid transmembrane transport","termid":"GO:1905200"}


id: GO:0019497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexachlorocyclohexane, a cyclohexane derivative with 6 chlorine atoms attached to the hexane ring. Hexachlorocyclohexane consists of a mixture of 8 different isomers and was used a commercial insecticide. It is persistent in the environment, causing serious soil pollution.","definition_xrefs":["UM-BBD_pathwayID:hch","UM-BBD_pathwayID:ghch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexachlorocyclohexane metabolic process","synonyms":[{"name":"hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0019497"}


id: PR:O74313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.08c gene.","definition_xrefs":["UniProtKB:O74313","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.08c","synonyms":[{"name":"Spom972h-SPBC15D4.08c","type":"exact"}],"termid":"PR:O74313"}


id: GO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of thylakoid membrane (obsolete GO:0031361)","synonyms":[{"name":"integral to thylakoid membrane","type":"narrow"}],"termid":"GO:0031361"}


id: FYPO:0004082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during mitosis","synonyms":[{"name":"normal protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during mitotic M phase","type":"related"},{"name":"normal protein phosphorylation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004082"}


id: GO:0038022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:sart","PMID:21041441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"olfactory receptor activity","termid":"GO:0004984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled olfactory receptor activity","synonyms":[{"name":"G-protein coupled odorant receptor activity","type":"exact"},{"name":"G-protein coupled olfactory receptor activity","type":"exact"},{"name":"odorant receptor activity, G-protein coupled","type":"narrow"},{"name":"olfactory receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0038022"}


id: GO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling in response to host (obsolete GO:0075174)","synonyms":[{"name":"regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075174"}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98988],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"4-hydroxy-3-all-trans-hexaprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-hexaprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:21944752","RHEA:20361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: GO:1900777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A catabolic process (obsolete GO:1900777)","synonyms":[{"name":"fumiquinazoline A breakdown","type":"exact"},{"name":"fumiquinazoline A catabolism","type":"exact"},{"name":"fumiquinazoline A degradation","type":"exact"}],"termid":"GO:1900777"}


id: GO:1905026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during ventricular cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rph","GOC:BHF","PMID:19893015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:1905024"},{"relation_name":"is_a","term_name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905033"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:0098915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"activation of electrocardiogram T wave","type":"related"},{"name":"activation of membrane repolarization during ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"activation of ventricular repolarization","type":"related"},{"name":"positive regulation of electrocardiogram T wave","type":"related"},{"name":"positive regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"positive regulation of ventricular repolarization","type":"related"},{"name":"up regulation of electrocardiogram T wave","type":"related"},{"name":"up regulation of membrane repolarization during ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"up regulation of ventricular repolarization","type":"related"},{"name":"up-regulation of electrocardiogram T wave","type":"related"},{"name":"up-regulation of membrane repolarization during ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"up-regulation of ventricular repolarization","type":"related"},{"name":"upregulation of electrocardiogram T wave","type":"related"},{"name":"upregulation of membrane repolarization during ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"upregulation of ventricular repolarization","type":"related"}],"termid":"GO:1905026"}


id: GO:1905550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","PMID:22768340","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"regulation of protein localization in ER","type":"exact"},{"name":"regulation of protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:1905550"}


id: GO:1905656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of artery smooth muscle contraction.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","GOC:TermGenie","PMID:27389411","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle contraction","termid":"GO:1904695"},{"relation_name":"is_a","term_name":"regulation of artery smooth muscle contraction","termid":"GO:1905654"},{"relation_name":"positively_regulates","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of artery smooth muscle contraction","synonyms":[{"name":"activation of artery smooth muscle contraction","type":"narrow"},{"name":"up regulation of artery smooth muscle contraction","type":"exact"},{"name":"up-regulation of artery smooth muscle contraction","type":"exact"},{"name":"upregulation of artery smooth muscle contraction","type":"exact"}],"termid":"GO:1905656"}


id: GO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003034"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + H+ + NADPH + O2 = (R)-menthofuran + 2 H2O + NADP+.","definition_xrefs":["EC:1.14.14.143","RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["KEGG_REACTION:R08923","MetaCyc:1.14.13.104-RXN"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: PBO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPPA antisense RNA 1","termid":"PBO:0061397"}


id: PBO:0056546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple coagulation factor deficiency 2 pseudogene 1","termid":"PBO:0056546"}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: GO:0010918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of membrane potential","termid":"GO:0045838"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane potential","synonyms":[{"name":"elevation of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010918"}


id: PBO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein 1, Bdc1","termid":"PBO:0004055"}


id: PBO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRF4","termid":"PBO:0018221"}


id: PBO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter (predicted)","termid":"PBO:0005764"}


id: PBO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 2","termid":"PBO:0061555"}


id: PBO:0005675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor SpEAF","termid":"PBO:0005675"}


id: GO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting polymeric IgA and polymeric IgM immunoglobulin, via transcytosis mediated by the polymeric immunoglobulin receptor (pIgR), from the basolateral surface to apical surface of an epithelial cell. At the apical surface the immunoglobulin binding portion of the pIgRis cleaved and remains bound to the transported immunoglobulin as secretory component (SC). The same process is used for the transport and excretion of IgA immune complexes to the luminal surface of the mucosa.","definition_xrefs":["GOC:add","ISBN:081533642X","PMID:16048543","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor","synonyms":[{"name":"antibody transcytosis mediated by pIgR","type":"exact"},{"name":"immunoglobulin transcytosis mediated by pIgR","type":"exact"}],"termid":"GO:0002415"}


id: PBO:0080194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 2","termid":"PBO:0080194"}


id: FYPO:0002239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"shortened telomeres during vegetative growth","synonyms":[{"name":"decreased telomere length during vegetative growth","type":"exact"},{"name":"reduced telomere length during vegetative growth","type":"exact"},{"name":"short telomeres during vegetative growth","type":"exact"},{"name":"shortened telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002239"}


id: GO:1990022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an RNA polymerase III complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:mcc","PMID:23267056"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III complex import into nucleus (obsolete GO:1990022)","synonyms":[{"name":"DNA-directed RNA polymerase III complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase III complex localization to nucleus","type":"exact"},{"name":"RNA polymerase III complex import into nucleus","type":"exact"},{"name":"RNA polymerase III complex localisation to nucleus","type":"exact"},{"name":"RNA polymerase III complex localization to nucleus","type":"related"}],"termid":"GO:1990022"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: RO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x actively participates in y if and only if x participates in y and x realizes some active role","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actively_participates_in","termid":"RO:0002217"}


id: PBO:0062346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 5 pseudogene","termid":"PBO:0062346"}


id: GO:0140468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via HRI (also known as EIF2AK1), an intracellular protein kinase that is activated by stress signals, such as heme deficiency, oxidative stress, osmotic shock, mitochondrial dysfunction and heat shock.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"HRI-mediated signaling","synonyms":[{"name":"EIF2AK1-mediated signaling","type":"exact"}],"termid":"GO:0140468"}


id: PBO:0066448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 1 homolog","termid":"PBO:0066448"}


id: PBO:0063618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3","termid":"PBO:0063618"}


id: PBO:0039155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 2","termid":"PBO:0039155"}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: GO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary protein complex involved in cilium biogenesis. It consists of at least seven Bardet-Biedl syndrome (BBS) proteins and BBIP10. It moves in association with IFT trains through cilia (likely as an IFT-A/B adaptor or cargo), and is required for the integrity of IFT-A and IFT-B.","definition_xrefs":["PMID:15231740","PMID:17574030","GOC:BHF","GOC:cilia","PMID:26498262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BBSome","synonyms":[{"name":"Bardet-Biedl syndrome complex","type":"exact"}],"termid":"GO:0034464"}


id: FYPO:0000033
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115306],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115362],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115307],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring localization is abnormal. Actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled and/or maintained in a specific location.","definition_xrefs":["PomBase:mah","GO:1902405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522"],"name":"abnormal actomyosin contractile ring localization","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_02392"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring localisation","type":"exact"},{"name":"abnormal actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring localization involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal actomyosin contractile ring positioning","type":"exact"},{"name":"abnormal cytokinetic contractile ring localization","type":"exact"},{"name":"abnormal mitotic contractile ring localization","type":"exact"},{"name":"cytokinesis defects, misplaced contractile ring","type":"exact"}],"termid":"FYPO:0000033","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0047117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acyl-[acyl-carrier protein] + NADP+ = trans-D2-enoyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["EC:1.3.1.39","MetaCyc:1.3.1.39-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity (obsolete GO:0047117)","synonyms":[{"name":"acyl-acyl-carrier-protein:NADP+ oxidoreductase (A-specific)","type":"related"},{"name":"enoyl-ACP reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-ACp reductase activity","type":"related"},{"name":"enoyl-[acyl-carrier protein] reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADPH, A-specific)","type":"related"}],"termid":"GO:0047117"}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: PBO:0027953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_pyridoxamine_5'-phosphate_level","termid":"PBO:0027953"}


id: PBO:0069733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1014, pseudogene","termid":"PBO:0069733"}


id: SO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon that has been redefined at translation. The redefinition may be as a result of translational bypass, translational frameshifting or stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_codon","synonyms":[{"name":"recoded codon","type":"exact"}],"termid":"SO:0000145"}


id: MOD:01433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanone.","definition_xrefs":["ChEBI:17906","PubMed:19196969","PubMed:12715872","RESID:AA0486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanone","synonyms":[{"name":"1-amino-2-propanone","type":"exact"},{"name":"1-aminopropan-2-one","type":"exact"},{"name":"1-aminopropanone","type":"exact"},{"name":"MOD_RES 1-amino-2-propanone","type":"exact"},{"name":"aminoacetone","type":"exact"}],"termid":"MOD:01433"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: GO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to wounding","termid":"GO:0090594"}


id: PBO:0067251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 325, pseudogene","termid":"PBO:0067251"}


id: GO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete streptomycin susceptibility/resistance (obsolete GO:0019881)","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"exact"}],"termid":"GO:0019881"}


id: FYPO:0002769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to spindle pole body","synonyms":[{"name":"abnormal protein localisation to spindle pole body","type":"exact"},{"name":"abnormal protein localization to SPB","type":"exact"}],"termid":"FYPO:0002769"}


id: PR:000027522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9HDY1-1, Ser-640/Ser-683/Ser-688/Ser-693, MOD:00046.","definition_xrefs":["PMID:19686686","PomBase:MAH","PMID:18257517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/Phos(S640,S683,S688,S693)","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Spom-ase1/Phos:1","type":"exact"},{"name":"ase1/Phos(S640,S683,S688,S693)","type":"exact"}],"termid":"PR:000027522"}


id: GO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sarcomeres are added in series within a fiber.","definition_xrefs":["GOC:lm","PMID:15947030","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"sarcomerogenesis","synonyms":[{"name":"myofibril production","type":"exact"}],"termid":"GO:0048769"}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: PBO:0090430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA desaturase","termid":"PBO:0090430"}


id: GO:0033625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"positively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin activation","synonyms":[{"name":"positive regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033625"}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_04549","SJAG_00714","SJAG_02832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97890,106666],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[107708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[97891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0006529":null,"GO:0019266":null,"GO:0070981":null}}


id: PR:P48383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.14","synonyms":[{"name":"Spom972h-sak1","type":"exact"}],"termid":"PR:P48383"}


id: GO:0052791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2-keto-3-deoxynononic acid)n + H2O = (2-keto-3-deoxynononic acid)n-1 + 2-keto-3-deoxynononic acid. This reaction is the hydrolysis of a 2-keto-3-deoxynononic acid residue from a poly-2-keto-3-deoxynononic acid chain.","definition_xrefs":["PMID:21247893","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-deoxy-D-glycero-D-galacto-2-nonulosonic acid hydrolase activity","synonyms":[{"name":"2-keto-3-deoxynononic acid sialidase activity","type":"exact"}],"termid":"GO:0052791"}


id: GO:1904724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a tertiary granule.","definition_xrefs":["GOC:TermGenie","PMID:23650620","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"tertiary granule lumen","synonyms":[{"name":"gelatinase granule membrane-enclosed lumen","type":"related"},{"name":"membrane-enclosed lumen of gelatinase granule","type":"exact"},{"name":"membrane-enclosed lumen of tertiary granule","type":"exact"},{"name":"tertiary granule membrane-enclosed lumen","type":"exact"}],"termid":"GO:1904724"}


id: PBO:0031134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_oxidative_stress","termid":"PBO:0031134"}


id: GO:0021601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve maturation","synonyms":[{"name":"CN VI maturation","type":"related"}],"termid":"GO:0021601"}


id: SO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region found within the modular centromere.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:centromeric_repeat","type":"exact"},{"name":"centromeric repeat","type":"exact"}],"termid":"SO:0001797"}


id: PBO:0054536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1936","termid":"PBO:0054536"}


id: PBO:0063807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit beta pseudogene 2","termid":"PBO:0063807"}


id: PBO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L23 (predicted)","termid":"PBO:0000333"}


id: GO:1904626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["PMID:22988142","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"positively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycine secretion, neurotransmission","synonyms":[{"name":"activation of glycine secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"upregulation of glycine secretion, neurotransmission","type":"exact"}],"termid":"GO:1904626"}


id: GO:1903575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cornified envelope.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:22226963","PMID:24794495","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cornified envelope assembly","synonyms":[{"name":"cornified envelope formation","type":"exact"}],"termid":"GO:1903575"}


id: GO:0044826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome integration into host DNA","synonyms":[{"name":"viral genome integration","type":"exact"}],"termid":"GO:0044826"}


id: PR:Q9URX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-cysteine desulfhydrase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.03","secondary_identifiers":["UniProtKB:Q9URX3"],"synonyms":[{"name":"ACC deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ACCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcyD","type":"exact"}],"termid":"PR:Q9URX3"}


id: GO:1904499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:BHF_telomere","GOC:TermGenie","PMID:22723415"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904499)","termid":"GO:1904499"}


id: PBO:0038403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-process_has_causal_agent","termid":"PBO:0038403"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:tb","GOC:add","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: GO:0019277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5514","MetaCyc:PWY-5512","MetaCyc:PWY-8013"],"synonyms":[{"name":"UDP-N-acetylgalactosamine anabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine biosynthesis","type":"exact"},{"name":"UDP-N-acetylgalactosamine formation","type":"exact"},{"name":"UDP-N-acetylgalactosamine synthesis","type":"exact"}],"termid":"GO:0019277"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: FYECO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethyl methanesulfonate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethyl methanesulfonate","synonyms":[{"name":"+ ethyl methanesulfonate","type":"exact"}],"termid":"FYECO:0000419"}


id: GO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the reorganization of tissue resulting in the maturation of the atrial ventricular junction.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"atrial ventricular junction remodeling","termid":"GO:0003294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in atrial ventricular junction remodeling","synonyms":[{"name":"apoptosis involved in atrial ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodelling","type":"exact"}],"termid":"GO:0003296"}


id: PBO:0041558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 48, pseudogene","termid":"PBO:0041558"}


id: PBO:0052311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0586","termid":"PBO:0052311"}


id: SO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification where the modification is the acylation of the residue.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_acetylation_site","synonyms":[{"name":"histone acetylation","type":"exact"},{"name":"histone acetylation site","type":"exact"}],"termid":"SO:0001702"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: GO:0035626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a juvenile hormone binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"juvenile hormone mediated signaling pathway","synonyms":[{"name":"juvenile hormone mediated signalling pathway","type":"exact"},{"name":"juvenile hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0035626"}


id: PBO:0087851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transaldolase of unknown function; transcription is repressed by Mot1p and induced by alpha-factor and during diauxic shift; NQM1 has a paralog, TAL1, that arose from the whole genome duplication","termid":"PBO:0087851"}


id: GO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of epinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","termid":"GO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal epinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by neuronal epinephrine","type":"related"}],"termid":"GO:0003087"}


id: GO:0048304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgG isotypes","termid":"GO:0048302"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgG isotypes","termid":"GO:0048291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgG isotypes","synonyms":[{"name":"activation of isotype switching to IgG isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgG isotypes","type":"exact"},{"name":"positive regulation of class switching to IgG isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgG isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgG isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgG isotypes","type":"exact"}],"termid":"GO:0048304"}


id: PR:Q10100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear transport factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.03c","secondary_identifiers":["UniProtKB:Q10100"],"synonyms":[{"name":"NTF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NUTF2","type":"exact"}],"termid":"PR:Q10100"}


id: GO:1990719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C2 axonemal microtubule (also called C2 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["PMID:9295136","PMID:21586547","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"C1 axonemal microtubule","synonyms":[{"name":"C1 tubule","type":"broad"}],"termid":"GO:1990719"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GO_REF:0000021","GOC:isa_complete","GOC:jid","GOC:dgh","GOC:dph","PMID:15541513","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: RO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is marker for d iff the presence or occurrence of d is correlated with the presence of occurrence of c, and the observation of c is used to infer the presence or occurrence of d. Note that this does not imply that c and d are in a direct causal relationship, as it may be the case that there is a third entity e that stands in a direct causal relationship with c and d.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_marker_for","termid":"RO:0002607"}


id: PBO:0056097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 2","termid":"PBO:0056097"}


id: SO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_monomethylation_site","synonyms":[{"name":"H2K27 mono-methylation site","type":"exact"},{"name":"H2K27Me1","type":"related"}],"termid":"SO:0001708"}


id: GO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"negatively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of white fat cell proliferation","synonyms":[{"name":"down regulation of white fat cell proliferation","type":"exact"},{"name":"down-regulation of white fat cell proliferation","type":"exact"},{"name":"downregulation of white fat cell proliferation","type":"exact"},{"name":"inhibition of white fat cell proliferation","type":"narrow"},{"name":"negative regulation of white adipocyte proliferation","type":"exact"},{"name":"negative regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070351"}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: PBO:0054436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1832","termid":"PBO:0054436"}


id: PBO:0084006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycine-tRNA synthetase, not expressed under normal growth conditions; expression is induced under heat, oxidative, pH, or ethanol stress conditions; more stable than the major glycine-tRNA synthetase Grs1p at 37 deg C; GRS2 has a paralog, GRS1, that arose from the whole genome duplication","termid":"PBO:0084006"}


id: PBO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0004541"}


id: GO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the rhamnose-binding lectin (RBL) family, a family of animal lectins that show specific binding activities to L-rhamnose or D-galactose.","definition_xrefs":["PMID:22312473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RBL family protein binding","synonyms":[{"name":"rhamnose-binding lectin family protein binding","type":"exact"}],"termid":"GO:0061675"}


id: GO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0016740","GO:0003824","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"cGMP-dependent protein kinase activity","secondary_identifiers":["EC:2.7.11.12","Reactome:R-HSA-1475422","Reactome:R-HSA-1497853","Reactome:R-HSA-418549","Reactome:R-HSA-418442"],"synonyms":[{"name":"3':5'-cyclic GMP-dependent protein kinase activity","type":"related"},{"name":"ATP:protein phosphotransferase (cGMP-dependent) activity","type":"related"},{"name":"PKG","type":"related"},{"name":"PKG 1alpha","type":"related"},{"name":"PKG 1beta","type":"related"},{"name":"PKG II","type":"related"},{"name":"STK23","type":"related"},{"name":"cGMP-dependent protein kinase ibeta activity","type":"related"},{"name":"guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity","type":"related"}],"termid":"GO:0004692"}


id: PBO:0054908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2322","termid":"PBO:0054908"}


id: PR:P36615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase csk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.06c","synonyms":[{"name":"CAK-activating kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CAKAK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csk1","type":"exact"}],"termid":"PR:P36615"}


id: GO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucarolactone + sinapoyl-CoA = O-sinapoylglucarolactone + CoA.","definition_xrefs":["MetaCyc:2.3.1.132-RXN","EC:2.3.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glucarolactone O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:14261"],"synonyms":[{"name":"sinapoyl-CoA:glucarolactone O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047171"}


id: GO:0106297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family E-series, hydroxy fatty acids derived from icosapentaenoic acid.","definition_xrefs":["PMID:21206090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"E-series resolvin biosynthetic process","termid":"GO:0106297"}


id: PBO:0070860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 13","termid":"PBO:0070860"}


id: PBO:0017489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-never_in_taxon","termid":"PBO:0017489"}


id: PBO:0038845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 14","termid":"PBO:0038845"}


id: PBO:0066662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 3","termid":"PBO:0066662"}


id: PBO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase Hat1","termid":"PBO:0000733"}


id: PBO:0089217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex SEL1/TPR repeat subunit","termid":"PBO:0089217"}


id: PBO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop6 (predicted)","termid":"PBO:0003813"}


id: GO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"third ventricle development","termid":"GO:0021678"}


id: PBO:0003498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transporter (predicted)","termid":"PBO:0003498"}


id: PR:O60102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family E member 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor rli1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.06","secondary_identifiers":["UniProtKB:O60102"],"synonyms":[{"name":"ATP-binding cassette sub-family E member rli1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNase L inhibitor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABCE1","type":"exact"}],"termid":"PR:O60102"}


id: PBO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 18","termid":"PBO:0071720"}


id: PBO:0042477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH3 antisense RNA 1","termid":"PBO:0042477"}


id: FYPO:0005212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during prometaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic prometaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic prometaphase","type":"exact"},{"name":"normal protein localization to kinetochore during prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0005212"}


id: GO:0120043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle.","definition_xrefs":["PMID:20170899","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium shaft","termid":"GO:0120043"}


id: PBO:0063979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 13","termid":"PBO:0063979"}


id: PBO:0084552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; induced during alcoholic fermentation; induced by low temperature and also by anaerobic conditions; negatively regulated by oxygen and repressed by heme","termid":"PBO:0084552"}


id: GO:1903049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21718690","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine-gated cation channel activity","termid":"GO:1903048"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of acetylcholine-gated cation channel activity","synonyms":[{"name":"down regulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"down-regulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"downregulation of acetylcholine-gated cation channel activity","type":"exact"},{"name":"inhibition of acetylcholine-gated cation channel activity","type":"narrow"}],"termid":"GO:1903049"}


id: PBO:0040343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MF-PTCD1 readthrough","termid":"PBO:0040343"}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PBO:0087756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface","termid":"PBO:0087756"}


id: PBO:0055670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lines homolog 1","termid":"PBO:0055670"}


id: PBO:0058275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4652","termid":"PBO:0058275"}


id: PBO:0086830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YPL039W is not an essential gene","termid":"PBO:0086830"}


id: GO:1900931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"positively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"activation of L-tyrosine import","type":"narrow"},{"name":"activation of L-tyrosine uptake","type":"narrow"},{"name":"positive regulation of L-tyrosine import","type":"broad"},{"name":"positive regulation of L-tyrosine uptake","type":"related"},{"name":"up regulation of L-tyrosine import","type":"exact"},{"name":"up regulation of L-tyrosine uptake","type":"related"},{"name":"up-regulation of L-tyrosine import","type":"exact"},{"name":"up-regulation of L-tyrosine uptake","type":"related"},{"name":"upregulation of L-tyrosine import","type":"exact"},{"name":"upregulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900931"}


id: GO:0034475
data:
  {"annotated_genes":["SJAG_02156","SJAG_04321","SJAG_04824","SJAG_04084","SJAG_01176","SJAG_01521","SJAG_03179","SJAG_04153","SJAG_04527","SJAG_04818","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72825,83823,88640,91545,92903,97811,97903,100179,101042,102276,114297],"is_not":false,"summary":null,"term":"GO:0034475"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U4 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01521":null,"SJAG_02156":null,"SJAG_03179":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"U4 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034475","terms_by_termid":{"GO:0034475":null}}


id: MOD:01379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 2'-methylsulfonyl-L-tryptophan.","definition_xrefs":["PubMed:6893271","RESID:AA0450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-methylsulfonyl-L-tryptophan","synonyms":[{"name":"2'-methylsulfonyl-L-tryptophan","type":"exact"},{"name":"2-methylsulfonyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"MOD_RES 2'-methylsulfonyltryptophan","type":"exact"}],"termid":"MOD:01379"}


id: PBO:0028822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_mating","termid":"PBO:0028822"}


id: PBO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Aim19","termid":"PBO:0032756"}


id: GO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin K biosynthetic process","synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K anabolism","type":"exact"},{"name":"vitamin K biosynthesis","type":"exact"},{"name":"vitamin K formation","type":"exact"},{"name":"vitamin K synthesis","type":"exact"}],"termid":"GO:0042371"}


id: PBO:0073743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 2","termid":"PBO:0073743"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: GO:0048858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cell projection are generated and organized.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"},{"relation_name":"part_of","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection morphogenesis","termid":"GO:0048858"}


id: PBO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1 (predicted)","termid":"PBO:0005360"}


id: PBO:0086487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ortholog of mammalian ETF-alpha; interacts with frataxin, Yfh1p; null mutant displays elevated frequency of mitochondrial genome loss; may have a role in oxidative stress response; ETF-alpha is an electron transfer flavoprotein complex subunit","termid":"PBO:0086487"}


id: PBO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0034439"}


id: PBO:0034061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediate_transformation_of","termid":"PBO:0034061"}


id: GO:0106376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyphytanoyl-CoA = 2,6,10,14-tetramethylpentadecanal + formyl-CoA.","definition_xrefs":["PMID:10468558","RHEA:25355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyacyl-CoA lyase activity","termid":"GO:0106359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyphytanoyl-CoA lyase activity","termid":"GO:0106376"}


id: GO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + (15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate = NAD(P)H + H+ + 15-oxo-5,8,11-cis-13-trans-icosatetraenoate.","definition_xrefs":["EC:1.1.1.232","MetaCyc:1.1.1.232-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"15-hydroxyicosatetraenoate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161789"],"synonyms":[{"name":"(15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD(P)+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxyeicosatetraenoate dehydrogenase activity","type":"related"}],"termid":"GO:0047034"}


id: GO:0047595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4,5,6-tetrahydro-6-oxonicotinate + oxidized ferredoxin = 6-hydroxynicotinate + reduced ferredoxin.","definition_xrefs":["MetaCyc:6-HYDROXYNICOTINATE-REDUCTASE-RXN","EC:1.3.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"6-hydroxynicotinate reductase activity","secondary_identifiers":["RHEA:17225"],"synonyms":[{"name":"1,4,5,6-tetrahydro-6-oxonicotinate:ferredoxin oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic reductase activity","type":"related"},{"name":"6-oxo-1,4,5,6-tetrahydronicotinate:ferredoxin oxidoreductase activity","type":"related"},{"name":"6-oxotetrahydro-nicotinate dehydrogenase activity","type":"related"},{"name":"6-oxotetrahydronicotinate dehydrogenase activity","type":"related"},{"name":"HNA reductase activity","type":"related"}],"termid":"GO:0047595"}


id: PBO:0068602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 53, pseudogene","termid":"PBO:0068602"}


id: FYPO:0007265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer, and longer, eisosome filaments than normal.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long eisosome filament","termid":"FYPO:0007264"},{"relation_name":"is_a","term_name":"long eisosome filament","termid":"FYPO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"long eisosome filaments present in decreased numbers","synonyms":[{"name":"decreased number of long eisosome filaments present","type":"exact"},{"name":"fewer long eisosome filaments present","type":"exact"},{"name":"long eisosome filaments present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"long eisosome filaments present in decreased numbers during vegetative growth","type":"exact"},{"name":"long eisosome filaments present in reduced numbers","type":"exact"}],"termid":"FYPO:0007265"}


id: PBO:0017746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter Sut1","termid":"PBO:0017746"}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: PBO:0078863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 7","termid":"PBO:0078863"}


id: GO:1902561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an origin recognition complex.","definition_xrefs":["GOC:TermGenie","PMID:11717425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"origin recognition complex assembly","synonyms":[{"name":"ORC assembly","type":"exact"},{"name":"ORC formation","type":"exact"},{"name":"origin of replication recognition complex assembly","type":"exact"},{"name":"origin of replication recognition complex formation","type":"exact"},{"name":"origin recognition complex formation","type":"exact"}],"termid":"GO:1902561"}


id: GO:0046452
data:
  {"annotated_genes":["SJAG_01198","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110026],"is_not":false,"summary":null,"term":"GO:0046452"},{"annotations":[68350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dihydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dihydrofolate metabolism","type":"exact"},{"name":"dihydrofolate reduction","type":"narrow"}],"termid":"GO:0046452","terms_by_termid":{"GO:0006761":null,"GO:0046452":null}}


id: PBO:0065825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5 interacting factor","termid":"PBO:0065825"}


id: PBO:0073518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding glutamate rich protein like 3","termid":"PBO:0073518"}


id: PBO:0030952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere","termid":"PBO:0030952"}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: PBO:0088699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Pet117","termid":"PBO:0088699"}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: GO:0060214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the endocardium of the heart. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:dph","PMID:17722983","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"endocardium morphogenesis","termid":"GO:0003160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardium formation","termid":"GO:0060214"}


id: PBO:0073350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 9 pseudogene 1","termid":"PBO:0073350"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0084920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular tether on nuclear membrane; mediates contact by interacting with Tom70p on mitochondria; protein abundance is regulated by phosphatidylcholine, enabling coupling of phospholipid homeostasis with contact extent","termid":"PBO:0084920"}


id: PR:000044698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044698"}


id: PBO:0085976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed involvement in transport based on mass spectrometry analysis of copurifying proteins; null mutant is viable","termid":"PBO:0085976"}


id: GO:0016617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-proline + NAD+ = 4-oxoproline + NADH + H+.","definition_xrefs":["EC:1.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-oxoproline reductase activity","secondary_identifiers":["MetaCyc:4-OXOPROLINE-REDUCTASE-RXN","RHEA:13601"],"synonyms":[{"name":"4-hydroxy-L-proline:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxy-L-proline oxidase activity","type":"exact"},{"name":"hydroxyproline oxidase activity","type":"related"}],"termid":"GO:0016617"}


id: PBO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG15 ubiquitin like modifier","termid":"PBO:0051865"}


id: GO:0046852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"positively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone remodeling","synonyms":[{"name":"activation of bone remodeling","type":"narrow"},{"name":"positive regulation of bone remodelling","type":"exact"},{"name":"stimulation of bone remodeling","type":"narrow"},{"name":"up regulation of bone remodeling","type":"exact"},{"name":"up-regulation of bone remodeling","type":"exact"},{"name":"upregulation of bone remodeling","type":"exact"}],"termid":"GO:0046852"}


id: GO:0160108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of an animal from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal gross anatomical part developmental process","synonyms":[{"name":"animal development","type":"related"}],"termid":"GO:0160108"}


id: GO:0033027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell apoptotic process","synonyms":[{"name":"activation of mast cell apoptosis","type":"narrow"},{"name":"positive regulation of mast cell apoptosis","type":"narrow"},{"name":"stimulation of mast cell apoptosis","type":"narrow"},{"name":"up regulation of mast cell apoptosis","type":"exact"},{"name":"up-regulation of mast cell apoptosis","type":"exact"},{"name":"upregulation of mast cell apoptosis","type":"exact"}],"termid":"GO:0033027"}


id: PBO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk2 (predicted)","termid":"PBO:0002598"}


id: PBO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 24","termid":"PBO:0075271"}


id: GO:0005985
data:
  {"annotated_genes":["SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sucrose metabolism","type":"exact"}],"termid":"GO:0005985","terms_by_termid":{"GO:0005987":null}}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: PBO:0063132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP1 binding protein","termid":"PBO:0063132"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: GO:1901149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to salicylic acid.","definition_xrefs":["GOC:TermGenie","PMID:22699612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"salicylic acid binding","synonyms":[{"name":"salicylic acid receptor","type":"narrow"}],"termid":"GO:1901149"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: GO:0051052
data:
  {"annotated_genes":["SJAG_03048","SJAG_00995","SJAG_02074","SJAG_03160","SJAG_03438","SJAG_02822","SJAG_03417","SJAG_01916","SJAG_00100","SJAG_00573","SJAG_04039","SJAG_03090","SJAG_02104","SJAG_02724","SJAG_04205","SJAG_01210","SJAG_02162","SJAG_00823","SJAG_02592","SJAG_03624","SJAG_01677","SJAG_03695","SJAG_00369","SJAG_01068","SJAG_01205","SJAG_00247","SJAG_01378","SJAG_00364","SJAG_04671","SJAG_00266","SJAG_03997","SJAG_03097","SJAG_03720","SJAG_04457","SJAG_03219","SJAG_04855","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[84239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008156"},{"annotations":[98092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[112858,104741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[93431,98096,104742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[103812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[95394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032211"},{"annotations":[84240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905839"},{"annotations":[113270,107936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[113271,99073,107937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[103229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[112237,84516,102430,98101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[104204,98104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[98105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[87671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[100895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010571"},{"annotations":[84517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[92833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[106193,104934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000018"},{"annotations":[85525,102391,89467,106054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006282"},{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[105179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"},{"annotations":[89964,84630,112286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"},{"annotations":[98974],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[90700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"},{"annotations":[104363,98001,102444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[95047,98975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[111000,95048,98002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"},{"annotations":[112238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_00995":null,"SJAG_01068":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01916":null,"SJAG_02074":null,"SJAG_02104":null,"SJAG_02162":null,"SJAG_02194":null,"SJAG_02592":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03090":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03219":null,"SJAG_03417":null,"SJAG_03438":null,"SJAG_03624":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04205":null,"SJAG_04457":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA metabolism","type":"exact"}],"termid":"GO:0051052","terms_by_termid":{"GO:0000018":null,"GO:0006282":null,"GO:0008156":null,"GO:0010520":null,"GO:0010569":null,"GO:0010571":null,"GO:0010845":null,"GO:0010846":null,"GO:0011000":null,"GO:0031582":null,"GO:0032210":null,"GO:0032211":null,"GO:0032215":null,"GO:0043111":null,"GO:0045128":null,"GO:0045739":null,"GO:0045951":null,"GO:0062209":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904332":null,"GO:1904514":null,"GO:1905263":null,"GO:1905839":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0015414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nitrate(out) = ADP + phosphate + nitrate(in).","definition_xrefs":["RHEA:13181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type nitrate transporter activity","secondary_identifiers":["MetaCyc:3.6.3.26-RXN","EC:7.3.2.4"],"synonyms":[{"name":"ATPase-coupled nitrate transmembrane transporter activity","type":"related"},{"name":"nitrate ABC transporter","type":"exact"},{"name":"nitrate transmembrane-transporting ATPase activity","type":"related"},{"name":"nitrate transporting ATPase activity","type":"related"},{"name":"nitrate-transporting ATPase activity","type":"related"}],"termid":"GO:0015414"}


id: SO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron which is spliced by the spliceosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron","synonyms":[{"name":"spliceosomal intron","type":"exact"}],"termid":"SO:0000662"}


id: PBO:0028850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_phenotype","termid":"PBO:0028850"}


id: PBO:0049622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 25","termid":"PBO:0049622"}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: PR:Q09191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10535:SF0","PRO:DNx","OMA:SCHPO00420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.15","secondary_identifiers":["UniProtKB:Q09191"],"synonyms":[{"name":"RNA polymerases I, II, and III subunit ABC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC24B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2E","type":"exact"}],"termid":"PR:Q09191"}


id: FYPO:0005097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested during G1 phase. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic G1 phase","termid":"FYPO:0000445"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0005097"}


id: SO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that does not affect protein function. Silent mutations may occur in genic ( CDS, UTR, intron etc) and intergenic regions. Silent mutations may have affects on processes such as splicing and regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mutation","secondary_identifiers":["loinc:LA6700-4","http://en.wikipedia.org/wiki/Silent_mutation"],"synonyms":[{"name":"silent mutation","type":"exact"}],"termid":"SO:0001017"}


id: FYPO:0004558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has an abnormal morphology, and in which actin cortical patch localization is abnormal.","definition_xrefs":["PMID:9765059","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000005","FYPO:0000138","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","synonyms":[{"name":"inviable after spore germination, undivided cell, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal F-actin patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localisation","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin patch localization","type":"exact"},{"name":"inviable following spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"}],"termid":"FYPO:0004558"}


id: PBO:0017735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1","termid":"PBO:0017735"}


id: PBO:0085292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phenylpyruvate decarboxylase; catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, which is the first specific step in the Ehrlich pathway; involved in protein N-terminal Met and Ala catabolism","termid":"PBO:0085292"}


id: _global:has_output_o_axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the axis_of relation","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_axis_of","secondary_identifiers":["GOREL:0001002"],"termid":"_global:has_output_o_axis_of"}


id: MOD:01764
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01764"}


id: FYPO:0003433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["UniProtKB:P0CT37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: PBO:0087999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tubulin folding factor D involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl","termid":"PBO:0087999"}


id: GO:1903752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","PMID:18681888","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901300"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"activation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"activation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"positive regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"positive regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"up-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"upregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"upregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903752"}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: PBO:0077587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPO antisense RNA 1","termid":"PBO:0077587"}


id: GO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: PBO:0084230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrophilic protein involved in ER/Golgi vesicle trafficking; SM (Sec1/Munc-18) family protein that binds the tSNARE Sed5p and stimulates its assembly into a trans-SNARE membrane-protein complex","termid":"PBO:0084230"}


id: PBO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine/uridine monophosphate kinase 1","termid":"PBO:0043401"}


id: PR:P23635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa1 gene.","definition_xrefs":["UniProtKB:P23635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.15","synonyms":[{"name":"Spom972h-ppa1","type":"exact"}],"termid":"PR:P23635"}


id: FYPO:0003993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to menadione","synonyms":[{"name":"decreased RNA accumulation during cellular response to menadione","type":"related"},{"name":"decreased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to menadione","type":"exact"},{"name":"reduced RNA level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0003993"}


id: PBO:0002980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease (predicted)","termid":"PBO:0002980"}


id: GO:0061492
data:
  {"annotated_genes":["SJAG_03508","SJAG_06270","SJAG_00229","SJAG_01790","SJAG_04455","SJAG_02514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89033,100804,96989,91263,106041,103369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to either the old or new spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","PMID:22119525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"asymmetric protein localization to old or new spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061492","terms_by_termid":{"GO:0061509":null}}


id: PBO:0040940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 11","termid":"PBO:0040940"}


id: GO:0033316
data:
  {"annotated_genes":["SJAG_03327","SJAG_01330","SJAG_01837","SJAG_04259","SJAG_04126","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97518,102123,110473,112675],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[102122,110471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109751],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97051],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a meiotic spindle assembly checkpoint, that delays the metaphase/anaphase transition of a meiotic cell cycle until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle checkpoint signaling","termid":"GO:0044779"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072465"],"synonyms":[{"name":"meiotic spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0033316","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0000764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cycloheximide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cycloheximide","synonyms":[{"name":"resistance to cycloheximide during mitotic cell cycle","type":"related"},{"name":"resistance to cycloheximide during vegetative growth","type":"exact"},{"name":"resistant to cycloheximide","type":"exact"}],"termid":"FYPO:0000764"}


id: PBO:0080621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 62","termid":"PBO:0080621"}


id: PBO:0091333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. crassa Pzl1","termid":"PBO:0091333"}


id: GO:0015188
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98541,105896],"is_not":false,"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-isoleucine from one side of a membrane to the other. L-isoleucine is (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-isoleucine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015188","terms_by_termid":{"GO:0015188":null}}


id: GO:0021787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","PMID:14699587","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemorepulsion of branchiomotor axon","termid":"GO:0021793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor neuron axon in neural tube","synonyms":[{"name":"negative chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021787"}


id: SO:1000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000105 sequence_variant_affecting_polypeptide_amino_acid_sequence (obsolete SO:1000105)","synonyms":[{"name":"mutation affecting polypeptide amino acid sequence","type":"related"},{"name":"sequence variant affecting polypeptide amino acid sequence","type":"exact"}],"termid":"SO:1000105"}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased free fatty acid accumulation","type":"related"},{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"}],"termid":"FYPO:0006714"}


id: PBO:0077828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member G, pseudogene","termid":"PBO:0077828"}


id: GO:0021619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"hypoglossal nerve development","termid":"GO:0021566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve maturation","synonyms":[{"name":"CN XII maturation","type":"related"}],"termid":"GO:0021619"}


id: PBO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member A","termid":"PBO:0047102"}


id: PBO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0050812"}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: PBO:0030155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_sister_chromatid_segregation","termid":"PBO:0030155"}


id: PBO:0074118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 4","termid":"PBO:0074118"}


id: GO:1900071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfite transport.","definition_xrefs":["GOC:TermGenie","PMID:10870099","PMID:10234785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"sulfite transport","termid":"GO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sulfite transport","synonyms":[{"name":"regulation of sulphite transport","type":"exact"}],"termid":"GO:1900071"}


id: FYPO:0000494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial genome maintenance","synonyms":[{"name":"mitochondrial genome maintenance: normal","type":"related"},{"name":"normal mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial genome maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0000494"}


id: SO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uridine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_uridine","synonyms":[{"name":"modified uridine","type":"exact"}],"termid":"SO:0001277"}


id: GO:1905766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","PMID:14690602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance in response to DNA damage","termid":"GO:1904507"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"positively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"activation of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"activation of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"positive regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"up-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"upregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"upregulation of protection from non-homologous end joining at telomere","type":"exact"}],"termid":"GO:1905766"}


id: PBO:0089916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5","termid":"PBO:0089916"}


id: GO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrophobic glycoprotein to which 11-cis-retinal binds as a Schiff base (in rhodopsin) or 3,4-didehydro-11-cis-retinal binds as a Schiff base in cyanopsin and porphyropsin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete opsin (obsolete GO:0015053)","synonyms":[{"name":"opsin","type":"exact"}],"termid":"GO:0015053"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: PBO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 56","termid":"PBO:0070685"}


id: PR:O13912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.06c","synonyms":[{"name":"Spom972h-SPAC23C11.06c","type":"exact"}],"termid":"PR:O13912"}


id: PBO:0039489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A12, pseudogene","termid":"PBO:0039489"}


id: SO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_repetitive_element","synonyms":[{"name":"engineered foreign repetitive element","type":"exact"}],"termid":"SO:0000293"}


id: PBO:0042820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 1","termid":"PBO:0042820"}


id: PBO:0079056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-2","termid":"PBO:0079056"}


id: PATO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Spheroid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spheroid","secondary_identifiers":["PATO:0001864"],"synonyms":[{"name":"sphericality","type":"related"}],"termid":"PATO:0001865"}


id: GO:0050961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus","termid":"GO:0016048"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory detection of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory detection of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception","type":"exact"}],"termid":"GO:0050961"}


id: SO:1001285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UGA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGA_stop_codon_signal","synonyms":[{"name":"UGA stop codon signal","type":"exact"}],"termid":"SO:1001285"}


id: PBO:0062678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily K member 1","termid":"PBO:0062678"}


id: PBO:0056655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 22","termid":"PBO:0056655"}


id: PBO:0109619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 11 pseudogene","termid":"PBO:0109619"}


id: GO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of histone deacetylase, which catalyzes of the removal of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["PMID:10482575","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"histone deacetylase regulator activity","termid":"GO:0035033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0004857","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"histone deacetylase inhibitor activity","termid":"GO:0046811"}


id: PBO:0030861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_medial_cortex","termid":"PBO:0030861"}


id: PBO:0061177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 7-1","termid":"PBO:0061177"}


id: GO:1902972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication DNA ligation","termid":"GO:1902333"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"premeiotic DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in meiotic DNA replication","type":"exact"},{"name":"DNA ligation involved in meiotic cell cycle DNA replication","type":"related"}],"termid":"GO:1902972"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PomBase:mah","PMID:24583014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: PBO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrt1","termid":"PBO:0016045"}


id: PBO:0035912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_antisense_RNA_level_during_vegetative_growth","termid":"PBO:0035912"}


id: PBO:0079304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2","termid":"PBO:0079304"}


id: PATO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated orange","synonyms":[{"name":"pale orange","type":"exact"}],"termid":"PATO:0001278"}


id: PBO:0067142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 190, pseudogene","termid":"PBO:0067142"}


id: PR:O94679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03605","PANTHER:PTHR14222:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.13","secondary_identifiers":["UniProtKB:O94679"],"synonyms":[{"name":"Spom972h-NCAPD2","type":"exact"},{"name":"XCAP-D2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p128 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O94679"}


id: GO:0006498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a lipid group to the amino terminus of a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein lipidation","termid":"GO:0006498"}


id: PBO:0062749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 1","termid":"PBO:0062749"}


id: GO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a malonyl group (CO-CH2-CO), from an amino acid residue within a protein or peptide.","definition_xrefs":["PMID:22076378","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demalonylation","termid":"GO:0036046"}


id: GO:1903134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose catabolic process that is involved in cellular response to stress.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15965643"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolic process involved in cellular response to stress (obsolete GO:1903134)","synonyms":[{"name":"mycose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mycose catabolism involved in cellular response to stress","type":"exact"},{"name":"mykose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mykose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose breakdown involved in cellular response to stress","type":"exact"},{"name":"trehalose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose degradation involved in cellular response to stress","type":"exact"}],"termid":"GO:1903134"}


id: PBO:0083388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083388"}


id: PBO:0038496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 6","termid":"PBO:0038496"}


id: PR:G2TRR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.19","synonyms":[{"name":"Spom972h-tam12","type":"exact"},{"name":"transcripts altered in meiosis protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRR3"}


id: GO:0160089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by N(7)-methylguanine (m7G), a modification present at internal sites of mRNAs and some non-coding RNAs.","definition_xrefs":["PMID:37379838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"internal N(7)-methylguanine-containing RNA reader activity","termid":"GO:0160089"}


id: PBO:0016898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug35","termid":"PBO:0016898"}


id: GO:2001121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a coenzyme gamma-F420-2.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"coenzyme gamma-F420-2 metabolic process","termid":"GO:0052649"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme gamma-F420-2 biosynthetic process","synonyms":[{"name":"coenzyme gamma-F420-2 biosynthesis","type":"exact"}],"termid":"GO:2001121"}


id: GO:2001099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotetraoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrasaccharide transport","termid":"GO:2001098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltotetraose transport","termid":"GO:2001099"}


id: PBO:0031207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization","termid":"PBO:0031207"}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["UniProtKB:P0CT53","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: GO:1903720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["PMID:23675531","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"negatively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of I-kappaB phosphorylation","synonyms":[{"name":"down regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down regulation of IKB phosphorylation","type":"exact"},{"name":"down regulation of IkappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"down-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of IKB phosphorylation","type":"exact"},{"name":"down-regulation of IkappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"downregulation of I-kappaB phosphorylation","type":"exact"},{"name":"downregulation of IKB phosphorylation","type":"exact"},{"name":"downregulation of IkappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"inhibition of I-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of IKB phosphorylation","type":"narrow"},{"name":"inhibition of IkappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"negative regulation of IKB phosphorylation","type":"exact"},{"name":"negative regulation of IkappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903720"}


id: PBO:0080992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 24","termid":"PBO:0080992"}


id: PBO:0057875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-4","termid":"PBO:0057875"}


id: GO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response","termid":"GO:0031347"}


id: PATO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000340 relative compatability value (obsolete PATO:0000340)","termid":"PATO:0000340"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: PBO:0068719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 8, pseudogene","termid":"PBO:0068719"}


id: PBO:0068142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 449","termid":"PBO:0068142"}


id: GO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"UDP-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"regulation of UDP-glucose catabolic process","synonyms":[{"name":"regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010904"}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: PBO:0084995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase localized to the perinuclear ER; produces superoxide from NADPH; overexpression causes MCA1 dependent apoptosis; likely involved in superoxide-mediated regulation of the actin cytoskeleton; member of a conserved superfamily of NADPH oxidases (NOX enzymes); has similarity to iron/copper reductases (FRE1-8), particularly Fre8p","termid":"PBO:0084995"}


id: PBO:0087366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; septin protein involved in sporulation; regulated by ABFI; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087366"}


id: GO:0075034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which nuclear division occurs within a symbiont spore that contributes to appressorium formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear division involved in appressorium formation (obsolete GO:0075034)","synonyms":[{"name":"nuclear division during appressorium formation on or near host","type":"related"},{"name":"nuclear division involved in appressorium formation on or near host","type":"related"}],"termid":"GO:0075034"}


id: GO:1901966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to iron ion starvation.","definition_xrefs":["GOC:TermGenie","PMID:23115244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to iron ion starvation","termid":"GO:0010106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to iron ion starvation","termid":"GO:1901966"}


id: PR:O94683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA-processing protein 7 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03610","PRO:DNx","PANTHER:PTHR13191:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.17","secondary_identifiers":["UniProtKB:O94683"],"synonyms":[{"name":"Spom972h-RRP7A","type":"exact"}],"termid":"PR:O94683"}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: PR:Q9USH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P31B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.04","synonyms":[{"name":"Spom972h-SPCP31B10.04","type":"exact"}],"termid":"PR:Q9USH0"}


